| add_external_data(Data *const &data_pt, const bool &fd=true) | oomph::GeneralisedElement | |
| add_global_eqn_numbers(std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt) | oomph::GeneralisedElement | protected |
| add_internal_data(Data *const &data_pt, const bool &fd=true) | oomph::GeneralisedElement | protected |
| add_internal_value_pt_to_map(std::map< unsigned, double * > &map_of_value_pt) | oomph::GeneralisedElement | |
| apply_rigid_body_motion(const unsigned &t, const Vector< double > &initial_x, Vector< double > &r) const | oomph::ImmersedRigidBodyElement | inlineprotected |
| assign_additional_local_eqn_numbers() | oomph::GeneralisedElement | inlineprotectedvirtual |
| assign_all_generic_local_eqn_numbers(const bool &store_local_dof_pt) | oomph::GeneralisedElement | inlineprotectedvirtual |
| assign_internal_and_external_local_eqn_numbers(const bool &store_local_dof_pt) | oomph::GeneralisedElement | protectedvirtual |
| assign_internal_eqn_numbers(unsigned long &global_number, Vector< double * > &Dof_pt) | oomph::GeneralisedElement | |
| assign_local_eqn_numbers(const bool &store_local_dof_pt) | oomph::GeneralisedElement | virtual |
| assign_zeta() | oomph::ImmersedRigidBodyTriangleMeshPolygon | inlineprivate |
| Can_update_configuration | oomph::TriangleMeshPolygon | protected |
| can_update_reference_configuration() const | oomph::TriangleMeshPolygon | inline |
| Centre_displacement_data_pt | oomph::ImmersedRigidBodyElement | protected |
| centre_displacement_data_pt() | oomph::ImmersedRigidBodyElement | inline |
| centre_displacement_local_eqn(const unsigned &i) | oomph::ImmersedRigidBodyElement | inlineprivate |
| centre_of_gravity() | oomph::ImmersedRigidBodyElement | inline |
| centre_rotation_angle() | oomph::ImmersedRigidBodyElement | inline |
| centre_x_displacement() | oomph::ImmersedRigidBodyElement | inline |
| centre_y_displacement() | oomph::ImmersedRigidBodyElement | inline |
| clear_global_eqn_numbers() | oomph::GeneralisedElement | inlineprotected |
| complete_setup_of_dependencies() | oomph::GeneralisedElement | inlinevirtual |
| compute_norm(Vector< double > &norm) | oomph::GeneralisedElement | inlinevirtual |
| compute_norm(double &norm) | oomph::GeneralisedElement | inlinevirtual |
| curve_section_pt(const unsigned &i) const | oomph::TriangleMeshCurve | inlinevirtual |
| curve_section_pt(const unsigned &i) | oomph::TriangleMeshCurve | inlinevirtual |
| Curve_section_pt | oomph::TriangleMeshCurve | protected |
| d2position(const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const | oomph::GeomObject | inlinevirtual |
| d2position(const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const | oomph::GeomObject | inlinevirtual |
| Data_fd | oomph::GeneralisedElement | private |
| Data_local_eqn | oomph::GeneralisedElement | private |
| Data_pt | oomph::GeneralisedElement | private |
| Default_fd_jacobian_step | oomph::GeneralisedElement | static |
| Default_Gravity_vector | oomph::ImmersedRigidBodyElement | privatestatic |
| Default_Physical_Constant_Value | oomph::ImmersedRigidBodyElement | privatestatic |
| Default_Physical_Ratio_Value | oomph::ImmersedRigidBodyElement | privatestatic |
| delete_external_hijacked_data() | oomph::ImmersedRigidBodyElement | inlineprivate |
| density_ratio() const | oomph::ImmersedRigidBodyElement | inline |
| density_ratio_pt() | oomph::ImmersedRigidBodyElement | inline |
| Density_ratio_pt | oomph::ImmersedRigidBodyElement | private |
| describe_dofs(std::ostream &out, const std::string ¤t_string) const | oomph::GeneralisedElement | |
| describe_local_dofs(std::ostream &out, const std::string ¤t_string) const | oomph::GeneralisedElement | virtual |
| disable_polyline_refinement() | oomph::TriangleMeshCurve | inline |
| disable_polyline_unrefinement() | oomph::TriangleMeshCurve | inline |
| disable_redistribution_of_segments_between_polylines() | oomph::TriangleMeshPolygon | inline |
| Displacement_data_is_internal | oomph::ImmersedRigidBodyElement | private |
| Dof_pt | oomph::GeneralisedElement | private |
| Dof_pt_deque | oomph::GeneralisedElement | protectedstatic |
| dof_pt_vector(Vector< double * > &dof_pt) | oomph::GeneralisedElement | inline |
| dof_vector(const unsigned &t, Vector< double > &dof) | oomph::GeneralisedElement | inline |
| dposition(const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const | oomph::GeomObject | inlinevirtual |
| dposition_dt(const Vector< double > &zeta, const unsigned &j, Vector< double > &drdt) | oomph::ImmersedRigidBodyElement | virtual |
| drag_mesh_pt() | oomph::ImmersedRigidBodyElement | inline |
| Drag_mesh_pt | oomph::ImmersedRigidBodyElement | private |
| Dummy_matrix | oomph::GeneralisedElement | protectedstatic |
| enable_polyline_refinement(const double &tolerance=0.08) | oomph::TriangleMeshCurve | inline |
| enable_polyline_unrefinement(const double &tolerance=0.04) | oomph::TriangleMeshCurve | inline |
| Enable_redistribution_of_segments_between_polylines | oomph::TriangleMeshPolygon | protected |
| enable_redistribution_of_segments_between_polylines() | oomph::TriangleMeshPolygon | inline |
| eqn_number(const unsigned &ieqn_local) const | oomph::GeneralisedElement | inline |
| Eqn_number | oomph::GeneralisedElement | private |
| exclude_external_data_fd(const unsigned &i) | oomph::GeneralisedElement | inline |
| exclude_internal_data_fd(const unsigned &i) | oomph::GeneralisedElement | inlineprotected |
| external_data_fd(const unsigned &i) const | oomph::GeneralisedElement | inline |
| external_data_pt(const unsigned &i) | oomph::GeneralisedElement | inline |
| external_data_pt(const unsigned &i) const | oomph::GeneralisedElement | inline |
| External_force_fct_pt | oomph::ImmersedRigidBodyElement | private |
| external_force_fct_pt() | oomph::ImmersedRigidBodyElement | inline |
| external_local_eqn(const unsigned &i, const unsigned &j) | oomph::GeneralisedElement | inlineprotected |
| External_torque_fct_pt | oomph::ImmersedRigidBodyElement | private |
| external_torque_fct_pt() | oomph::ImmersedRigidBodyElement | inline |
| ExternalForceFctPt typedef | oomph::ImmersedRigidBodyElement | |
| ExternalTorqueFctPt typedef | oomph::ImmersedRigidBodyElement | |
| fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter(double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_djacobian_dparameter(double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_dresiduals_dparameter(double *const ¶meter_pt, Vector< double > &dres_dparam) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_hessian_vector_products(Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_inner_product_vectors(Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_inner_products(Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_jacobian(Vector< double > &residuals, DenseMatrix< double > &jacobian) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| fill_in_contribution_to_jacobian_and_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &mass_matrix) | oomph::GeneralisedElement | protectedvirtual |
| fill_in_contribution_to_residuals(Vector< double > &residuals) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| fill_in_jacobian_from_external_by_fd(Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false) | oomph::GeneralisedElement | protected |
| fill_in_jacobian_from_external_by_fd(DenseMatrix< double > &jacobian, const bool &fd_all_data=false) | oomph::GeneralisedElement | inlineprotected |
| fill_in_jacobian_from_internal_by_fd(Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false) | oomph::GeneralisedElement | protected |
| fill_in_jacobian_from_internal_by_fd(DenseMatrix< double > &jacobian, const bool &fd_all_data=false) | oomph::GeneralisedElement | inlineprotected |
| fix_internal_point() | oomph::TriangleMeshClosedCurve | inline |
| flush_drag_mesh() | oomph::ImmersedRigidBodyElement | inline |
| flush_external_data() | oomph::GeneralisedElement | |
| flush_external_data(Data *const &data_pt) | oomph::GeneralisedElement | |
| g() const | oomph::ImmersedRigidBodyElement | inline |
| G_pt | oomph::ImmersedRigidBodyElement | private |
| g_pt() | oomph::ImmersedRigidBodyElement | inline |
| GeneralisedElement() | oomph::GeneralisedElement | inline |
| GeneralisedElement(const GeneralisedElement &)=delete | oomph::GeneralisedElement | |
| geom_data_pt(const unsigned &j) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| Geom_object_pt | oomph::ImmersedRigidBodyElement | private |
| Geom_object_time_stepper_pt | oomph::GeomObject | protected |
| GeomObject() | oomph::GeomObject | inline |
| GeomObject(const unsigned &ndim) | oomph::GeomObject | inline |
| GeomObject(const unsigned &nlagrangian, const unsigned &ndim) | oomph::GeomObject | inline |
| GeomObject(const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt) | oomph::GeomObject | inline |
| GeomObject(const GeomObject &dummy)=delete | oomph::GeomObject | |
| get_djacobian_and_dmass_matrix_dparameter(double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam) | oomph::GeneralisedElement | inlinevirtual |
| get_djacobian_dparameter(double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam) | oomph::GeneralisedElement | inlinevirtual |
| get_dof_numbers_for_unknowns(std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const | oomph::GeneralisedElement | inlinevirtual |
| get_dresiduals_dparameter(double *const ¶meter_pt, Vector< double > &dres_dparam) | oomph::GeneralisedElement | inlinevirtual |
| get_force_and_torque(const double &time, Vector< double > &force, double &torque) | oomph::ImmersedRigidBodyElement | |
| get_hessian_vector_products(Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product) | oomph::GeneralisedElement | inlinevirtual |
| get_initial_position(const Vector< double > &xi, Vector< double > &r) const | oomph::ImmersedRigidBodyTriangleMeshPolygon | inlineprivate |
| get_inner_product_vectors(Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector) | oomph::GeneralisedElement | inlinevirtual |
| get_inner_products(Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product) | oomph::GeneralisedElement | inlinevirtual |
| get_jacobian(Vector< double > &residuals, DenseMatrix< double > &jacobian) | oomph::GeneralisedElement | inlinevirtual |
| get_jacobian_and_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix) | oomph::GeneralisedElement | inlinevirtual |
| get_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &mass_matrix) | oomph::GeneralisedElement | inlinevirtual |
| get_residuals(Vector< double > &residuals) | oomph::GeneralisedElement | inlinevirtual |
| get_residuals_rigid_body_generic(Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &flag) | oomph::ImmersedRigidBodyElement | private |
| ImmersedRigidBodyElement(TimeStepper *const &time_stepper_pt, Data *const ¢re_displacement_data_pt=0) | oomph::ImmersedRigidBodyElement | inlineprotected |
| ImmersedRigidBodyElement(GeomObject *const &geom_object_pt, TimeStepper *const &time_stepper_pt, Data *const ¢re_displacement_data_pt=0) | oomph::ImmersedRigidBodyElement | inline |
| ImmersedRigidBodyTriangleMeshPolygon(const Vector< double > &hole_center, const Vector< TriangleMeshCurveSection * > &boundary_polyline_pt, TimeStepper *const &time_stepper_pt, Data *const ¢re_displacement_data_pt=0) | oomph::ImmersedRigidBodyTriangleMeshPolygon | |
| include_external_data_fd(const unsigned &i) | oomph::GeneralisedElement | inline |
| Include_geometric_rotation | oomph::ImmersedRigidBodyElement | private |
| include_internal_data_fd(const unsigned &i) | oomph::GeneralisedElement | inlineprotected |
| Index_for_centre_displacement | oomph::ImmersedRigidBodyElement | private |
| Initial_centre_of_mass | oomph::ImmersedRigidBodyElement | protected |
| initial_centre_of_mass(const unsigned &i) | oomph::ImmersedRigidBodyElement | inline |
| initial_centre_of_mass(const unsigned &i) const | oomph::ImmersedRigidBodyElement | inline |
| initial_phi() | oomph::ImmersedRigidBodyElement | inline |
| Initial_Phi | oomph::ImmersedRigidBodyElement | protected |
| initialise(TimeStepper *const &time_stepper_pt) | oomph::ImmersedRigidBodyElement | private |
| internal_data_fd(const unsigned &i) const | oomph::GeneralisedElement | inlineprotected |
| internal_data_pt(const unsigned &i) | oomph::GeneralisedElement | inline |
| internal_data_pt(const unsigned &i) const | oomph::GeneralisedElement | inline |
| internal_local_eqn(const unsigned &i, const unsigned &j) const | oomph::GeneralisedElement | inlineprotected |
| internal_point() const | oomph::TriangleMeshClosedCurve | inline |
| internal_point() | oomph::TriangleMeshClosedCurve | inline |
| Internal_point_pt | oomph::TriangleMeshClosedCurve | protected |
| interpolated_zeta(const Vector< double > &s, Vector< double > &zeta) const | oomph::GeomObject | inlinevirtual |
| is_fixed() const | oomph::TriangleMeshPolygon | inline |
| is_internal_point_fixed() const | oomph::TriangleMeshClosedCurve | inline |
| Is_internal_point_fixed | oomph::TriangleMeshClosedCurve | protected |
| is_redistribution_of_segments_between_polylines_enabled() | oomph::TriangleMeshPolygon | inline |
| List_of_external_hijacked_data | oomph::ImmersedRigidBodyElement | private |
| local_eqn_number(const unsigned long &ieqn_global) const | oomph::GeneralisedElement | inline |
| locate_zeta(const Vector< double > &zeta, GeomObject *&sub_geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false) | oomph::GeomObject | inlinevirtual |
| Mass | oomph::ImmersedRigidBodyElement | protected |
| mass_shape() | oomph::ImmersedRigidBodyElement | inline |
| max_boundary_id() | oomph::TriangleMeshCurve | inline |
| Moment_of_inertia | oomph::ImmersedRigidBodyElement | protected |
| moment_of_inertia_shape() | oomph::ImmersedRigidBodyElement | inline |
| ncurve_section() const | oomph::TriangleMeshPolygon | inlinevirtual |
| Ndim | oomph::GeomObject | protected |
| ndim() const | oomph::GeomObject | inline |
| Ndof | oomph::GeneralisedElement | private |
| ndof() const | oomph::GeneralisedElement | inline |
| ndof_types() const | oomph::GeneralisedElement | inlinevirtual |
| Nexternal_data | oomph::GeneralisedElement | private |
| nexternal_data() const | oomph::GeneralisedElement | inline |
| ngeom_data() const | oomph::ImmersedRigidBodyElement | inlinevirtual |
| ninternal_data() const | oomph::GeneralisedElement | inline |
| Ninternal_data | oomph::GeneralisedElement | private |
| NLagrangian | oomph::GeomObject | protected |
| nlagrangian() const | oomph::GeomObject | inline |
| node_update_adjacent_fluid_elements() | oomph::ImmersedRigidBodyElement | inline |
| npolyline() const | oomph::TriangleMeshPolygon | inline |
| nsegments() const | oomph::TriangleMeshClosedCurve | inlinevirtual |
| nvertices() const | oomph::TriangleMeshClosedCurve | inlinevirtual |
| oomph::operator=(const GeneralisedElement &)=delete | oomph::GeneralisedElement | |
| oomph::GeomObject::operator=(const GeomObject &)=delete | oomph::GeomObject | |
| output(std::ostream &outfile, const unsigned &n_sample=50) | oomph::TriangleMeshClosedCurve | inlinevirtual |
| output_centre_of_gravity(std::ostream &outfile) | oomph::ImmersedRigidBodyElement | |
| pin_centre_of_mass_coordinate(const unsigned &i) | oomph::ImmersedRigidBodyElement | inline |
| pin_rotation_angle() | oomph::ImmersedRigidBodyElement | inline |
| polygon_boundary_id() | oomph::TriangleMeshPolygon | inline |
| Polygon_fixed | oomph::TriangleMeshPolygon | private |
| polyline_pt(const unsigned &i) const | oomph::TriangleMeshPolygon | inline |
| polyline_pt(const unsigned &i) | oomph::TriangleMeshPolygon | inline |
| polyline_refinement_tolerance() | oomph::TriangleMeshCurve | inline |
| Polyline_refinement_tolerance | oomph::TriangleMeshCurve | private |
| polyline_unrefinement_tolerance() | oomph::TriangleMeshCurve | inline |
| Polyline_unrefinement_tolerance | oomph::TriangleMeshCurve | private |
| position(const Vector< double > &xi, Vector< double > &r) const | oomph::ImmersedRigidBodyTriangleMeshPolygon | inlinevirtual |
| position(const unsigned &t, const Vector< double > &xi, Vector< double > &r) const | oomph::ImmersedRigidBodyTriangleMeshPolygon | inlinevirtual |
| oomph::GeomObject::position(const double &t, const Vector< double > &zeta, Vector< double > &r) const | oomph::GeomObject | inlinevirtual |
| re() const | oomph::ImmersedRigidBodyElement | inline |
| re_invfr() | oomph::ImmersedRigidBodyElement | inline |
| re_invfr_pt() | oomph::ImmersedRigidBodyElement | inline |
| re_pt() | oomph::ImmersedRigidBodyElement | inline |
| Re_pt | oomph::ImmersedRigidBodyElement | private |
| ReInvFr_pt | oomph::ImmersedRigidBodyElement | private |
| reset_after_external_fd() | oomph::ImmersedRigidBodyElement | inlinevirtual |
| reset_after_internal_fd() | oomph::ImmersedRigidBodyElement | inlinevirtual |
| reset_in_external_fd(const unsigned &i) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| reset_in_internal_fd(const unsigned &i) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| reset_reference_configuration() | oomph::ImmersedRigidBodyTriangleMeshPolygon | virtual |
| self_test() | oomph::GeneralisedElement | virtual |
| set_drag_mesh(Mesh *const &drag_mesh_pt) | oomph::ImmersedRigidBodyElement | |
| set_fixed() | oomph::TriangleMeshPolygon | inline |
| set_geometric_rotation() | oomph::ImmersedRigidBodyElement | inline |
| set_internal_data_time_stepper(const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data) | oomph::GeneralisedElement | inline |
| set_nlagrangian_and_ndim(const unsigned &n_lagrangian, const unsigned &n_dim) | oomph::GeomObject | inline |
| set_polyline_refinement_tolerance(const double &tolerance) | oomph::TriangleMeshCurve | inline |
| set_polyline_unrefinement_tolerance(const double &tolerance) | oomph::TriangleMeshCurve | inline |
| set_unfixed() | oomph::TriangleMeshPolygon | inline |
| st() const | oomph::ImmersedRigidBodyElement | inline |
| st_pt() | oomph::ImmersedRigidBodyElement | inline |
| St_pt | oomph::ImmersedRigidBodyElement | private |
| Suppress_warning_about_repeated_external_data | oomph::GeneralisedElement | static |
| Suppress_warning_about_repeated_internal_data | oomph::GeneralisedElement | static |
| time_stepper_pt() | oomph::GeomObject | inline |
| time_stepper_pt() const | oomph::GeomObject | inline |
| TriangleMeshClosedCurve(const Vector< TriangleMeshCurveSection * > &curve_section_pt, const Vector< double > &internal_point_pt=Vector< double >(0), const bool &is_internal_point_fixed=false) | oomph::TriangleMeshClosedCurve | |
| TriangleMeshCurve(const Vector< TriangleMeshCurveSection * > &curve_section_pt) | oomph::TriangleMeshCurve | inline |
| TriangleMeshPolygon(const Vector< TriangleMeshCurveSection * > &boundary_polyline_pt, const Vector< double > &internal_point_pt=Vector< double >(0), const bool &is_internal_point_fixed=false) | oomph::TriangleMeshPolygon | |
| unfix_internal_point() | oomph::TriangleMeshClosedCurve | inline |
| unpin_centre_of_mass_coordinate(const unsigned &i) | oomph::ImmersedRigidBodyElement | inline |
| unpin_rotation_angle() | oomph::ImmersedRigidBodyElement | inline |
| unset_geometric_rotation() | oomph::ImmersedRigidBodyElement | inline |
| update_before_external_fd() | oomph::GeneralisedElement | inlineprotectedvirtual |
| update_before_internal_fd() | oomph::GeneralisedElement | inlineprotectedvirtual |
| update_in_external_fd(const unsigned &i) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| update_in_internal_fd(const unsigned &i) | oomph::ImmersedRigidBodyElement | inlinevirtual |
| Zeta_vertex | oomph::ImmersedRigidBodyTriangleMeshPolygon | private |
| ~GeneralisedElement() | oomph::GeneralisedElement | virtual |
| ~GeomObject() | oomph::GeomObject | inlinevirtual |
| ~ImmersedRigidBodyElement() | oomph::ImmersedRigidBodyElement | inline |
| ~ImmersedRigidBodyTriangleMeshPolygon() | oomph::ImmersedRigidBodyTriangleMeshPolygon | inline |
| ~TriangleMeshClosedCurve() | oomph::TriangleMeshClosedCurve | inlinevirtual |
| ~TriangleMeshCurve() | oomph::TriangleMeshCurve | inlinevirtual |
| ~TriangleMeshPolygon() | oomph::TriangleMeshPolygon | inlinevirtual |