oomph::RefineableAxisymmetricQCrouzeixRaviartElement Class Reference

#include <refineable_axisym_navier_stokes_elements.h>

+ Inheritance diagram for oomph::RefineableAxisymmetricQCrouzeixRaviartElement:

Public Member Functions

 RefineableAxisymmetricQCrouzeixRaviartElement ()
 Constructor: More...
 
unsigned ncont_interpolated_values () const
 Number of continuously interpolated values: 3 (velocities) More...
 
void rebuild_from_sons (Mesh *&mesh_pt)
 Rebuild from sons: Reconstruct pressure from the (merged) sons. More...
 
unsigned nrecovery_order ()
 
unsigned nvertex_node () const
 Number of vertex nodes in the element. More...
 
Nodevertex_node_pt (const unsigned &j) const
 Pointer to the j-th vertex node in the element. More...
 
void get_interpolated_values (const Vector< double > &s, Vector< double > &values)
 
void get_interpolated_values (const unsigned &t, const Vector< double > &s, Vector< double > &values)
 
void further_setup_hanging_nodes ()
 
void further_build ()
 
- Public Member Functions inherited from oomph::AxisymmetricQCrouzeixRaviartElement
 AxisymmetricQCrouzeixRaviartElement ()
 Constructor, there are three internal values (for the pressure) More...
 
virtual unsigned required_nvalue (const unsigned &n) const
 Number of values (pinned or dofs) required at local node n. More...
 
double p_axi_nst (const unsigned &i) const
 
unsigned npres_axi_nst () const
 Return number of pressure values. More...
 
void fix_pressure (const unsigned &p_dof, const double &pvalue)
 Function to fix the internal pressure dof idof_internal. More...
 
void get_traction (const Vector< double > &s, const Vector< double > &N, Vector< double > &traction) const
 Compute traction at local coordinate s for outer unit normal N. More...
 
int p_local_eqn (const unsigned &n) const
 
void output (std::ostream &outfile)
 Redirect output to NavierStokesEquations output. More...
 
void output (std::ostream &outfile, const unsigned &n_plot)
 Redirect output to NavierStokesEquations output. More...
 
void output (FILE *file_pt)
 Redirect output to NavierStokesEquations output. More...
 
void output (FILE *file_pt, const unsigned &n_plot)
 Redirect output to NavierStokesEquations output. More...
 
unsigned ndof_types () const
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const
 
- Public Member Functions inherited from oomph::AxisymmetricNavierStokesEquations
 AxisymmetricNavierStokesEquations ()
 Constructor: NULL the body force and source function. More...
 
const doublere () const
 Reynolds number. More...
 
const doublere_st () const
 Product of Reynolds and Strouhal number (=Womersley number) More...
 
double *& re_pt ()
 Pointer to Reynolds number. More...
 
double *& re_st_pt ()
 Pointer to product of Reynolds and Strouhal number (=Womersley number) More...
 
const doublere_invfr () const
 Global inverse Froude number. More...
 
double *& re_invfr_pt ()
 Pointer to global inverse Froude number. More...
 
const doublere_invro () const
 Global Reynolds number multiplied by inverse Rossby number. More...
 
double *& re_invro_pt ()
 Pointer to global inverse Froude number. More...
 
const Vector< double > & g () const
 Vector of gravitational components. More...
 
Vector< double > *& g_pt ()
 Pointer to Vector of gravitational components. More...
 
const doubledensity_ratio () const
 
double *& density_ratio_pt ()
 Pointer to Density ratio. More...
 
const doubleviscosity_ratio () const
 
double *& viscosity_ratio_pt ()
 Pointer to Viscosity Ratio. More...
 
virtual unsigned u_index_axi_nst (const unsigned &i) const
 
unsigned u_index_nst (const unsigned &i) const
 
unsigned n_u_nst () const
 
double du_dt_axi_nst (const unsigned &n, const unsigned &i) const
 
void disable_ALE ()
 
void enable_ALE ()
 
virtual int p_nodal_index_axi_nst () const
 Which nodal value represents the pressure? More...
 
double pressure_integral () const
 Integral of pressure over element. More...
 
double dissipation () const
 Return integral of dissipation over element. More...
 
double dissipation (const Vector< double > &s) const
 Return dissipation at local coordinate s. More...
 
double kin_energy () const
 Get integral of kinetic energy over element. More...
 
void strain_rate (const Vector< double > &s, DenseMatrix< double > &strain_rate) const
 Strain-rate tensor: \( e_{ij} \) where \( i,j = r,z,\theta \) (in that order) More...
 
void traction (const Vector< double > &s, const Vector< double > &N, Vector< double > &traction) const
 
void get_pressure_and_velocity_mass_matrix_diagonal (Vector< double > &press_mass_diag, Vector< double > &veloc_mass_diag, const unsigned &which_one=0)
 
unsigned nscalar_paraview () const
 
void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
std::string scalar_name_paraview (const unsigned &i) const
 
void point_output_data (const Vector< double > &s, Vector< double > &data)
 
void output_veloc (std::ostream &outfile, const unsigned &nplot, const unsigned &t)
 
void output_fct (std::ostream &outfile, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 
void output_fct (std::ostream &outfile, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 
void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Compute the element's residual Vector. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
void fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 Compute the element's residual Vector. More...
 
void fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
void fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
void interpolated_u_axi_nst (const Vector< double > &s, Vector< double > &veloc) const
 Compute vector of FE interpolated velocity u at local coordinate s. More...
 
double interpolated_u_axi_nst (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated velocity u[i] at local coordinate s. More...
 
double interpolated_u_axi_nst (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 Return FE interpolated velocity u[i] at local coordinate s. More...
 
double interpolated_p_axi_nst (const Vector< double > &s) const
 Return FE interpolated pressure at local coordinate s. More...
 
double interpolated_duds_axi_nst (const Vector< double > &s, const unsigned &i, const unsigned &j) const
 
double interpolated_dudx_axi_nst (const Vector< double > &s, const unsigned &i, const unsigned &j) const
 
double interpolated_dudt_axi_nst (const Vector< double > &s, const unsigned &i) const
 
double interpolated_d_dudx_dX_axi_nst (const Vector< double > &s, const unsigned &p, const unsigned &q, const unsigned &i, const unsigned &k) const
 
double compute_physical_size () const
 Compute the volume of the element. More...
 
- Public Member Functions inherited from oomph::FiniteElement
void set_dimension (const unsigned &dim)
 
void set_nodal_dimension (const unsigned &nodal_dim)
 
void set_nnodal_position_type (const unsigned &nposition_type)
 Set the number of types required to interpolate the coordinate. More...
 
void set_n_node (const unsigned &n)
 
int nodal_local_eqn (const unsigned &n, const unsigned &i) const
 
double dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const
 
 FiniteElement ()
 Constructor. More...
 
virtual ~FiniteElement ()
 
 FiniteElement (const FiniteElement &)=delete
 Broken copy constructor. More...
 
void get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const
 
virtual void local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
 
virtual void local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
 
virtual double local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)
 
MacroElementmacro_elem_pt ()
 Access function to pointer to macro element. More...
 
void get_x (const Vector< double > &s, Vector< double > &x) const
 
void get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void set_integration_scheme (Integral *const &integral_pt)
 Set the spatial integration scheme. More...
 
Integral *const & integral_pt () const
 Return the pointer to the integration scheme (const version) More...
 
virtual void shape (const Vector< double > &s, Shape &psi) const =0
 
virtual void shape_at_knot (const unsigned &ipt, Shape &psi) const
 
virtual void dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
 
virtual void dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const
 
virtual void d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual void d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual double J_eulerian (const Vector< double > &s) const
 
virtual double J_eulerian_at_knot (const unsigned &ipt) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
void check_jacobian (const double &jacobian) const
 
double dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const
 
double d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual double d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual void describe_local_dofs (std::ostream &out, const std::string &current_string) const
 
virtual void describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const
 
virtual void assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)
 
Node *& node_pt (const unsigned &n)
 Return a pointer to the local node n. More...
 
Node *const & node_pt (const unsigned &n) const
 Return a pointer to the local node n (const version) More...
 
unsigned nnode () const
 Return the number of nodes. More...
 
virtual unsigned nnode_1d () const
 
double raw_nodal_position (const unsigned &n, const unsigned &i) const
 
double raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position (const unsigned &n, const unsigned &i) const
 
double nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double dnodal_position_dt (const unsigned &n, const unsigned &i) const
 Return the i-th component of nodal velocity: dx/dt at local node n. More...
 
double dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
unsigned nnodal_position_type () const
 
bool has_hanging_nodes () const
 
unsigned nodal_dimension () const
 Return the required Eulerian dimension of the nodes in this element. More...
 
virtual Nodeconstruct_node (const unsigned &n)
 
virtual Nodeconstruct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
virtual Nodeconstruct_boundary_node (const unsigned &n)
 
virtual Nodeconstruct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
int get_node_number (Node *const &node_pt) const
 
virtual Nodeget_node_at_local_coordinate (const Vector< double > &s) const
 
double raw_nodal_value (const unsigned &n, const unsigned &i) const
 
double raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
unsigned dim () const
 
virtual double interpolated_x (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated coordinate x[i] at local coordinate s. More...
 
virtual double interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual void interpolated_x (const Vector< double > &s, Vector< double > &x) const
 Return FE interpolated position x[] at local coordinate s as Vector. More...
 
virtual void interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const
 
virtual double interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)
 
virtual void interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)
 
unsigned ngeom_data () const
 
Datageom_data_pt (const unsigned &j)
 
void position (const Vector< double > &zeta, Vector< double > &r) const
 
void position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const
 
void dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)
 
virtual double zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const
 
void interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const
 
void locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)
 
virtual void node_update ()
 
virtual void identify_geometric_data (std::set< Data * > &geometric_data_pt)
 
virtual double s_min () const
 Min value of local coordinate. More...
 
virtual double s_max () const
 Max. value of local coordinate. More...
 
double size () const
 
void point_output (std::ostream &outfile, const Vector< double > &s)
 
virtual unsigned nplot_points_paraview (const unsigned &nplot) const
 
virtual unsigned nsub_elements_paraview (const unsigned &nplot) const
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const
 
virtual void write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
 Output a time-dependent exact solution over the element. More...
 
virtual void get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
 
virtual std::string tecplot_zone_string (const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const
 
virtual unsigned nplot_points (const unsigned &nplot) const
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)
 
void integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
 Integrate Vector-valued function over element. More...
 
void integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
 Integrate Vector-valued time-dep function over element. More...
 
virtual void build_face_element (const int &face_index, FaceElement *face_element_pt)
 
virtual unsigned self_test ()
 
virtual unsigned get_bulk_node_number (const int &face_index, const unsigned &i) const
 
virtual int face_outer_unit_normal_sign (const int &face_index) const
 Get the sign of the outer unit normal on the face given by face_index. More...
 
void face_node_number_error_check (const unsigned &i) const
 Range check for face node numbers. More...
 
virtual CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt (const int &face_index) const
 
virtual BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt (const int &face_index) const
 
- Public Member Functions inherited from oomph::GeneralisedElement
 GeneralisedElement ()
 Constructor: Initialise all pointers and all values to zero. More...
 
virtual ~GeneralisedElement ()
 Virtual destructor to clean up any memory allocated by the object. More...
 
 GeneralisedElement (const GeneralisedElement &)=delete
 Broken copy constructor. More...
 
void operator= (const GeneralisedElement &)=delete
 Broken assignment operator. More...
 
Data *& internal_data_pt (const unsigned &i)
 Return a pointer to i-th internal data object. More...
 
Data *const & internal_data_pt (const unsigned &i) const
 Return a pointer to i-th internal data object (const version) More...
 
Data *& external_data_pt (const unsigned &i)
 Return a pointer to i-th external data object. More...
 
Data *const & external_data_pt (const unsigned &i) const
 Return a pointer to i-th external data object (const version) More...
 
unsigned long eqn_number (const unsigned &ieqn_local) const
 
int local_eqn_number (const unsigned long &ieqn_global) const
 
unsigned add_external_data (Data *const &data_pt, const bool &fd=true)
 
bool external_data_fd (const unsigned &i) const
 
void exclude_external_data_fd (const unsigned &i)
 
void include_external_data_fd (const unsigned &i)
 
void flush_external_data ()
 Flush all external data. More...
 
void flush_external_data (Data *const &data_pt)
 Flush the object addressed by data_pt from the external data array. More...
 
unsigned ninternal_data () const
 Return the number of internal data objects. More...
 
unsigned nexternal_data () const
 Return the number of external data objects. More...
 
unsigned ndof () const
 Return the number of equations/dofs in the element. More...
 
void dof_vector (const unsigned &t, Vector< double > &dof)
 Return the vector of dof values at time level t. More...
 
void dof_pt_vector (Vector< double * > &dof_pt)
 Return the vector of pointers to dof values. More...
 
void set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)
 
virtual void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void complete_setup_of_dependencies ()
 
virtual void get_residuals (Vector< double > &residuals)
 
virtual void get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
virtual void get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
virtual void get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
virtual void compute_norm (Vector< double > &norm)
 
virtual void compute_norm (double &norm)
 
- Public Member Functions inherited from oomph::GeomObject
 GeomObject ()
 Default constructor. More...
 
 GeomObject (const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)
 
 GeomObject (const GeomObject &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const GeomObject &)=delete
 Broken assignment operator. More...
 
virtual ~GeomObject ()
 (Empty) destructor More...
 
unsigned nlagrangian () const
 Access function to # of Lagrangian coordinates. More...
 
unsigned ndim () const
 Access function to # of Eulerian coordinates. More...
 
void set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
 Set # of Lagrangian and Eulerian coordinates. More...
 
TimeStepper *& time_stepper_pt ()
 
TimeSteppertime_stepper_pt () const
 
virtual void position (const double &t, const Vector< double > &zeta, Vector< double > &r) const
 
virtual void dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const
 
virtual void d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const
 
virtual void d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const
 
- Public Member Functions inherited from oomph::NavierStokesElementWithDiagonalMassMatrices
 NavierStokesElementWithDiagonalMassMatrices ()
 Empty constructor. More...
 
virtual ~NavierStokesElementWithDiagonalMassMatrices ()
 Virtual destructor. More...
 
 NavierStokesElementWithDiagonalMassMatrices (const NavierStokesElementWithDiagonalMassMatrices &)=delete
 Broken copy constructor. More...
 
void operator= (const NavierStokesElementWithDiagonalMassMatrices &)=delete
 Broken assignment operator. More...
 
- Public Member Functions inherited from oomph::RefineableAxisymmetricNavierStokesEquations
 RefineableAxisymmetricNavierStokesEquations ()
 Empty Constructor. More...
 
unsigned num_Z2_flux_terms ()
 Number of 'flux' terms for Z2 error estimation. More...
 
void get_Z2_flux (const Vector< double > &s, Vector< double > &flux)
 
double geometric_jacobian (const Vector< double > &x)
 Fill in the geometric Jacobian, which in this case is r. More...
 
void dinterpolated_u_axi_nst_ddata (const Vector< double > &s, const unsigned &i, Vector< double > &du_ddata, Vector< unsigned > &global_eqn_number)
 
virtual void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
- Public Member Functions inherited from oomph::RefineableElement
 RefineableElement ()
 
virtual ~RefineableElement ()
 Destructor, delete the allocated storage for the hanging equations. More...
 
 RefineableElement (const RefineableElement &)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableElement &)=delete
 Broken assignment operator. More...
 
Treetree_pt ()
 Access function: Pointer to quadtree representation of this element. More...
 
void set_tree_pt (Tree *my_tree_pt)
 Set pointer to quadtree representation of this element. More...
 
bool refinement_is_enabled ()
 Flag to indicate suppression of any refinement. More...
 
void disable_refinement ()
 Suppress of any refinement for this element. More...
 
void enable_refinement ()
 Emnable refinement for this element. More...
 
template<class ELEMENT >
void split (Vector< ELEMENT * > &son_pt) const
 
int local_hang_eqn (Node *const &node_pt, const unsigned &i)
 
void set_refinement_level (const int &refine_level)
 Set the refinement level. More...
 
unsigned refinement_level () const
 Return the Refinement level. More...
 
void select_for_refinement ()
 Select the element for refinement. More...
 
void deselect_for_refinement ()
 Deselect the element for refinement. More...
 
void select_sons_for_unrefinement ()
 Unrefinement will be performed by merging the four sons of this element. More...
 
void deselect_sons_for_unrefinement ()
 
bool to_be_refined ()
 Has the element been selected for refinement? More...
 
bool sons_to_be_unrefined ()
 Has the element been selected for unrefinement? More...
 
virtual void unbuild ()
 
virtual void deactivate_element ()
 
virtual bool nodes_built ()
 Return true if all the nodes have been built, false if not. More...
 
long number () const
 Element number (for debugging/plotting) More...
 
void set_number (const long &mynumber)
 Set element number (for debugging/plotting) More...
 
virtual Nodeinterpolating_node_pt (const unsigned &n, const int &value_id)
 
virtual double local_one_d_fraction_of_interpolating_node (const unsigned &n1d, const unsigned &i, const int &value_id)
 
virtual Nodeget_interpolating_node_at_local_coordinate (const Vector< double > &s, const int &value_id)
 
virtual unsigned ninterpolating_node (const int &value_id)
 
virtual unsigned ninterpolating_node_1d (const int &value_id)
 
virtual void interpolating_basis (const Vector< double > &s, Shape &psi, const int &value_id) const
 
void identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)
 
void assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual RefineableElementroot_element_pt ()
 
virtual RefineableElementfather_element_pt () const
 Return a pointer to the father element. More...
 
void get_father_at_refinement_level (unsigned &refinement_level, RefineableElement *&father_at_reflevel_pt)
 
virtual void initial_setup (Tree *const &adopted_father_pt=0, const unsigned &initial_p_order=0)
 
virtual void pre_build (Mesh *&mesh_pt, Vector< Node * > &new_node_pt)
 Pre-build the element. More...
 
void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
unsigned nshape_controlling_nodes ()
 
std::map< Node *, unsignedshape_controlling_node_lookup ()
 
- Public Member Functions inherited from oomph::ElementWithZ2ErrorEstimator
 ElementWithZ2ErrorEstimator ()
 Default empty constructor. More...
 
 ElementWithZ2ErrorEstimator (const ElementWithZ2ErrorEstimator &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithZ2ErrorEstimator &)=delete
 Broken assignment operator. More...
 
virtual unsigned ncompound_fluxes ()
 
virtual void compute_exact_Z2_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_flux_pt, double &error, double &norm)
 
virtual void get_Z2_compound_flux_indices (Vector< unsigned > &flux_index)
 
- Public Member Functions inherited from oomph::RefineableQElement< 2 >
 RefineableQElement ()
 Constructor: Pass refinement level (default 0 = root) More...
 
 RefineableQElement (const RefineableQElement< 2 > &dummy)=delete
 Broken copy constructor. More...
 
virtual ~RefineableQElement ()
 Broken assignment operator. More...
 
unsigned required_nsons () const
 A refineable quad element has four sons. More...
 
virtual Nodenode_created_by_neighbour (const Vector< double > &s_fraction, bool &is_periodic)
 
virtual Nodenode_created_by_son_of_neighbour (const Vector< double > &s_fraction, bool &is_periodic)
 
virtual void build (Mesh *&mesh_pt, Vector< Node * > &new_node_pt, bool &was_already_built, std::ofstream &new_nodes_file)
 
void check_integrity (double &max_error)
 
void output_corners (std::ostream &outfile, const std::string &colour) const
 Print corner nodes, use colour. More...
 
QuadTreequadtree_pt ()
 Pointer to quadtree representation of this element. More...
 
QuadTreequadtree_pt () const
 Pointer to quadtree representation of this element. More...
 
void setup_hanging_nodes (Vector< std::ofstream * > &output_stream)
 
void get_boundaries (const int &edge, std::set< unsigned > &boundaries) const
 
void get_bcs (int bound, Vector< int > &bound_cons) const
 
void interpolated_zeta_on_edge (const unsigned &boundary, const int &edge, const Vector< double > &s, Vector< double > &zeta)
 
- Public Member Functions inherited from oomph::QuadElementBase
 QuadElementBase ()
 Constructor. Empty. More...
 
- Public Member Functions inherited from oomph::QElementBase
 QElementBase ()
 Constructor: Initialise pointers to macro element reference coords. More...
 
 QElementBase (const QElementBase &)=delete
 Broken copy constructor. More...
 
virtual ~QElementBase ()
 Broken assignment operator. More...
 
bool local_coord_is_valid (const Vector< double > &s)
 Check whether the local coordinate are valid or not. More...
 
void move_local_coord_back_into_element (Vector< double > &s) const
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt)
 
doubles_macro_ll (const unsigned &i)
 
doubles_macro_ur (const unsigned &i)
 
double s_macro_ll (const unsigned &i) const
 
double s_macro_ur (const unsigned &i) const
 
void get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const
 
void get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
unsigned nnode_on_face () const
 
ElementGeometry::ElementGeometry element_geometry () const
 It's a Q element! More...
 
- Public Member Functions inherited from oomph::QElementGeometricBase
 QElementGeometricBase ()
 Empty default constructor. More...
 
 QElementGeometricBase (const QElementGeometricBase &)=delete
 Broken copy constructor. More...
 

Private Member Functions

void unpin_elemental_pressure_dofs ()
 Unpin all the internal pressure freedoms. More...
 

Additional Inherited Members

- Public Types inherited from oomph::FiniteElement
typedef void(* SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)
 
typedef void(* UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)
 
- Public Types inherited from oomph::RefineableQElement< 2 >
typedef void(RefineableQElement< 2 >::* VoidMemberFctPt) ()
 
- Static Public Member Functions inherited from oomph::RefineableAxisymmetricNavierStokesEquations
static void pin_redundant_nodal_pressures (const Vector< GeneralisedElement * > &element_pt)
 
static void unpin_all_pressure_dofs (const Vector< GeneralisedElement * > &element_pt)
 Unpin all pressure dofs in elements listed in vector. More...
 
- Static Public Member Functions inherited from oomph::RefineableElement
static doublemax_integrity_tolerance ()
 Max. allowed discrepancy in element integrity check. More...
 
- Public Attributes inherited from oomph::AxisymmetricNavierStokesEquations
void(*&)(const double &time, const Vector< double > &x, Vector< double > &faxi_nst_body_force_fct_pt ()
 Access function for the body-force pointer. More...
 
double(*&)(const double &time, const Vector< double > &xsource_fct_pt ()
 Access function for the source-function pointer. More...
 
- Static Public Attributes inherited from oomph::AxisymmetricNavierStokesEquations
static Vector< doubleGamma
 Vector to decide whether the stress-divergence form is used or not. More...
 
- Static Public Attributes inherited from oomph::FiniteElement
static double Tolerance_for_singular_jacobian = 1.0e-16
 Tolerance below which the jacobian is considered singular. More...
 
static bool Accept_negative_jacobian = false
 
static bool Suppress_output_while_checking_for_inverted_elements
 
- Static Public Attributes inherited from oomph::GeneralisedElement
static bool Suppress_warning_about_repeated_internal_data
 
static bool Suppress_warning_about_repeated_external_data = true
 
static double Default_fd_jacobian_step = 1.0e-8
 
- Protected Member Functions inherited from oomph::AxisymmetricQCrouzeixRaviartElement
double dshape_and_dtest_eulerian_axi_nst (const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_axi_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_axi_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
void pshape_axi_nst (const Vector< double > &s, Shape &psi) const
 Pressure shape functions at local coordinate s. More...
 
void pshape_axi_nst (const Vector< double > &s, Shape &psi, Shape &test) const
 Pressure shape and test functions at local coordinte s. More...
 
- Protected Member Functions inherited from oomph::AxisymmetricNavierStokesEquations
virtual void get_body_force_axi_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &result)
 Calculate the body force fct at a given time and Eulerian position. More...
 
virtual void get_body_force_gradient_axi_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, DenseMatrix< double > &d_body_force_dx)
 
double get_source_fct (const double &time, const unsigned &ipt, const Vector< double > &x)
 Calculate the source fct at given time and Eulerian position. More...
 
virtual void get_source_fct_gradient (const double &time, const unsigned &ipt, const Vector< double > &x, Vector< double > &gradient)
 
virtual void get_viscosity_ratio_axisym_nst (const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, double &visc_ratio)
 
- Protected Member Functions inherited from oomph::FiniteElement
template<unsigned DIM>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual void dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<unsigned DIM>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
virtual void d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<unsigned DIM>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
virtual void transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
void transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
virtual void transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
void fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_nodal_fd ()
 
virtual void reset_after_nodal_fd ()
 
virtual void update_in_nodal_fd (const unsigned &i)
 
virtual void reset_in_nodal_fd (const unsigned &i)
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 One-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Two-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
- Protected Member Functions inherited from oomph::GeneralisedElement
unsigned add_internal_data (Data *const &data_pt, const bool &fd=true)
 
bool internal_data_fd (const unsigned &i) const
 
void exclude_internal_data_fd (const unsigned &i)
 
void include_internal_data_fd (const unsigned &i)
 
void clear_global_eqn_numbers ()
 
void add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)
 
virtual void assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void assign_additional_local_eqn_numbers ()
 
int internal_local_eqn (const unsigned &i, const unsigned &j) const
 
int external_local_eqn (const unsigned &i, const unsigned &j)
 
void fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
virtual void update_before_internal_fd ()
 
virtual void reset_after_internal_fd ()
 
virtual void update_in_internal_fd (const unsigned &i)
 
virtual void reset_in_internal_fd (const unsigned &i)
 
virtual void update_before_external_fd ()
 
virtual void reset_after_external_fd ()
 
virtual void update_in_external_fd (const unsigned &i)
 
virtual void reset_in_external_fd (const unsigned &i)
 
virtual void fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Protected Member Functions inherited from oomph::RefineableAxisymmetricNavierStokesEquations
virtual Nodepressure_node_pt (const unsigned &n_p)
 
virtual void pin_elemental_redundant_nodal_pressure_dofs ()
 
- Protected Member Functions inherited from oomph::RefineableElement
void assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const
 
void assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const
 
void assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const
 
double local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
void assign_hanging_local_eqn_numbers (const bool &store_local_dof_pt)
 Assign the local equation numbers for hanging node variables. More...
 
virtual void fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
- Protected Member Functions inherited from oomph::RefineableQElement< 2 >
void setup_father_bounds ()
 
void get_edge_bcs (const int &edge, Vector< int > &bound_cons) const
 Determine Vector of boundary conditions along edge (N/S/W/E) More...
 
void setup_hang_for_value (const int &value_id)
 
virtual void quad_hang_helper (const int &value_id, const int &my_edge, std::ofstream &output_hangfile)
 
- Static Protected Member Functions inherited from oomph::RefineableElement
static void check_value_id (const int &n_continuously_interpolated_values, const int &value_id)
 
- Protected Attributes inherited from oomph::AxisymmetricQCrouzeixRaviartElement
unsigned P_axi_nst_internal_index
 
- Protected Attributes inherited from oomph::AxisymmetricNavierStokesEquations
doubleViscosity_Ratio_pt
 
doubleDensity_Ratio_pt
 
doubleRe_pt
 Pointer to global Reynolds number. More...
 
doubleReSt_pt
 Pointer to global Reynolds number x Strouhal number (=Womersley) More...
 
doubleReInvFr_pt
 
doubleReInvRo_pt
 
Vector< double > * G_pt
 Pointer to global gravity Vector. More...
 
void(* Body_force_fct_pt )(const double &time, const Vector< double > &x, Vector< double > &result)
 Pointer to body force function. More...
 
double(* Source_fct_pt )(const double &time, const Vector< double > &x)
 Pointer to volumetric source function. More...
 
bool ALE_is_disabled
 
- Protected Attributes inherited from oomph::FiniteElement
MacroElementMacro_elem_pt
 Pointer to the element's macro element (NULL by default) More...
 
- Protected Attributes inherited from oomph::GeomObject
unsigned NLagrangian
 Number of Lagrangian (intrinsic) coordinates. More...
 
unsigned Ndim
 Number of Eulerian coordinates. More...
 
TimeStepperGeom_object_time_stepper_pt
 
- Protected Attributes inherited from oomph::RefineableElement
TreeTree_pt
 A pointer to a general tree object. More...
 
unsigned Refine_level
 Refinement level. More...
 
bool To_be_refined
 Flag for refinement. More...
 
bool Refinement_is_enabled
 Flag to indicate suppression of any refinement. More...
 
bool Sons_to_be_unrefined
 Flag for unrefinement. More...
 
long Number
 Global element number – for plotting/validation purposes. More...
 
- Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned Default_Initial_Nvalue = 0
 Default value for the number of values at a node. More...
 
static const double Node_location_tolerance = 1.0e-14
 
static const unsigned N2deriv [] = {0, 1, 3, 6}
 
- Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< doubleDummy_matrix
 
static std::deque< double * > Dof_pt_deque
 
- Static Protected Attributes inherited from oomph::RefineableElement
static double Max_integrity_tolerance = 1.0e-8
 Max. allowed discrepancy in element integrity check. More...
 
- Static Protected Attributes inherited from oomph::RefineableQElement< 2 >
static std::map< unsigned, DenseMatrix< int > > Father_bound
 

Detailed Description

Refineable version of Axisymmetric Quad Crouzeix Raviart elements (note that unlike the cartesian version this is not scale-able to higher dimensions!)

Constructor & Destructor Documentation

◆ RefineableAxisymmetricQCrouzeixRaviartElement()

oomph::RefineableAxisymmetricQCrouzeixRaviartElement::RefineableAxisymmetricQCrouzeixRaviartElement ( )
inline

Constructor:

781  : RefineableElement(),
783  RefineableQElement<2>(),
785  {
786  }
AxisymmetricQCrouzeixRaviartElement()
Constructor, there are three internal values (for the pressure)
Definition: axisym_navier_stokes_elements.h:1288
RefineableAxisymmetricNavierStokesEquations()
Empty Constructor.
Definition: refineable_axisym_navier_stokes_elements.h:67
RefineableElement()
Definition: refineable_elements.h:188

Member Function Documentation

◆ further_build()

void oomph::RefineableAxisymmetricQCrouzeixRaviartElement::further_build ( )
inlinevirtual

Further build for Crouzeix_Raviart interpolates the internal pressure dofs from father element: Make sure pressure values and dp/ds agree between fathers and sons at the midpoints of the son elements.

Reimplemented from oomph::RefineableAxisymmetricNavierStokesEquations.

985  {
986  // Call the generic further build
988 
989  using namespace QuadTreeNames;
990 
991  // What type of son am I? Ask my quadtree representation...
992  int son_type = quadtree_pt()->son_type();
993 
994  // Pointer to my father (in element impersonation)
995  RefineableElement* father_el_pt = quadtree_pt()->father_pt()->object_pt();
996 
997  Vector<double> s_father(2);
998 
999  // Son midpoint is located at the following coordinates in father element:
1000 
1001  // South west son
1002  if (son_type == SW)
1003  {
1004  s_father[0] = -0.5;
1005  s_father[1] = -0.5;
1006  }
1007  // South east son
1008  else if (son_type == SE)
1009  {
1010  s_father[0] = 0.5;
1011  s_father[1] = -0.5;
1012  }
1013  // North east son
1014  else if (son_type == NE)
1015  {
1016  s_father[0] = 0.5;
1017  s_father[1] = 0.5;
1018  }
1019 
1020  // North west son
1021  else if (son_type == NW)
1022  {
1023  s_father[0] = -0.5;
1024  s_father[1] = 0.5;
1025  }
1026 
1027  // Pressure value in father element
1030  father_el_pt);
1031  double press = cast_father_el_pt->interpolated_p_axi_nst(s_father);
1032 
1033  // Pressure value gets copied straight into internal dof:
1035 
1036 
1037  // The slopes get copied from father
1039  ->set_value(
1040  1,
1041  0.5 * cast_father_el_pt->internal_data_pt(P_axi_nst_internal_index)
1042  ->value(1));
1043 
1045  ->set_value(
1046  2,
1047  0.5 * cast_father_el_pt->internal_data_pt(P_axi_nst_internal_index)
1048  ->value(2));
1049  }
unsigned P_axi_nst_internal_index
Definition: axisym_navier_stokes_elements.h:1242
void set_value(const unsigned &i, const double &value_)
Definition: nodes.h:271
Data *& internal_data_pt(const unsigned &i)
Return a pointer to i-th internal data object.
Definition: elements.h:622
void further_build()
Further build: pass the pointers down to the sons.
Definition: refineable_axisym_navier_stokes_elements.h:136
RefineableAxisymmetricQCrouzeixRaviartElement()
Constructor:
Definition: refineable_axisym_navier_stokes_elements.h:780
QuadTree * quadtree_pt()
Pointer to quadtree representation of this element.
Definition: refineable_quad_element.h:152
RefineableElement * object_pt() const
Definition: tree.h:88
Tree * father_pt() const
Return pointer to father: NULL if it's a root node.
Definition: tree.h:235
int son_type() const
Return son type.
Definition: tree.h:214
@ SE
Definition: quadtree.h:57
@ NW
Definition: quadtree.h:58
@ NE
Definition: quadtree.h:59
@ SW
Definition: quadtree.h:56

References oomph::Tree::father_pt(), oomph::RefineableAxisymmetricNavierStokesEquations::further_build(), oomph::GeneralisedElement::internal_data_pt(), oomph::AxisymmetricNavierStokesEquations::interpolated_p_axi_nst(), oomph::QuadTreeNames::NE, oomph::QuadTreeNames::NW, oomph::Tree::object_pt(), oomph::AxisymmetricQCrouzeixRaviartElement::P_axi_nst_internal_index, oomph::RefineableQElement< 2 >::quadtree_pt(), oomph::QuadTreeNames::SE, oomph::Data::set_value(), oomph::Tree::son_type(), oomph::QuadTreeNames::SW, and oomph::Data::value().

Referenced by oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::further_build(), and RefineableQAxisymCrouzeixRaviartBoussinesqElement::further_build().

◆ further_setup_hanging_nodes()

void oomph::RefineableAxisymmetricQCrouzeixRaviartElement::further_setup_hanging_nodes ( )
inlinevirtual

Perform additional hanging node procedures for variables that are not interpolated by all nodes. Empty

Implements oomph::RefineableQElement< 2 >.

978 {}

Referenced by oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::further_setup_hanging_nodes().

◆ get_interpolated_values() [1/2]

void oomph::RefineableAxisymmetricQCrouzeixRaviartElement::get_interpolated_values ( const unsigned t,
const Vector< double > &  s,
Vector< double > &  values 
)
inlinevirtual

Get all function values [u,v..,p] at previous timestep t (t=0: present; t>0: previous timestep).
Note: Given the generality of the interface (this function is usually called from black-box documentation or interpolation routines), the values Vector sets its own size in here.
Note: No pressure history is kept, so pressure is always the current value.

Implements oomph::RefineableElement.

945  {
946  unsigned DIM = 3;
947 
948  // Set size of Vector: u,w,v
949  values.resize(DIM);
950 
951  // Initialise
952  for (unsigned i = 0; i < DIM; i++)
953  {
954  values[i] = 0.0;
955  }
956 
957  // Find out how many nodes there are
958  unsigned n_node = nnode();
959 
960  // Shape functions
961  Shape psif(n_node);
962  shape(s, psif);
963 
964  // Calculate velocities: values[0],...
965  for (unsigned i = 0; i < DIM; i++)
966  {
967  // Get the local index at which the i-th velocity is stored
968  unsigned u_local_index = u_index_axi_nst(i);
969  for (unsigned l = 0; l < n_node; l++)
970  {
971  values[i] += nodal_value(t, l, u_local_index) * psif[l];
972  }
973  }
974  }
int i
Definition: BiCGSTAB_step_by_step.cpp:9
virtual unsigned u_index_axi_nst(const unsigned &i) const
Definition: axisym_navier_stokes_elements.h:506
double nodal_value(const unsigned &n, const unsigned &i) const
Definition: elements.h:2593
virtual void shape(const Vector< double > &s, Shape &psi) const =0
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2210
RealScalar s
Definition: level1_cplx_impl.h:130
#define DIM
Definition: linearised_navier_stokes_elements.h:44
t
Definition: plotPSD.py:36

References DIM, i, oomph::FiniteElement::nnode(), oomph::FiniteElement::nodal_value(), s, oomph::FiniteElement::shape(), plotPSD::t, and oomph::AxisymmetricNavierStokesEquations::u_index_axi_nst().

◆ get_interpolated_values() [2/2]

void oomph::RefineableAxisymmetricQCrouzeixRaviartElement::get_interpolated_values ( const Vector< double > &  s,
Vector< double > &  values 
)
inlinevirtual

Get the function value u in Vector. Note: Given the generality of the interface (this function is usually called from black-box documentation or interpolation routines), the values Vector sets its own size in here.

Reimplemented from oomph::RefineableElement.

920  {
921  unsigned DIM = 3;
922 
923  // Set size of Vector: u,w,v and initialise to zero
924  values.resize(DIM, 0.0);
925 
926  // Calculate velocities: values[0],...
927  for (unsigned i = 0; i < DIM; i++)
928  {
929  values[i] = interpolated_u_axi_nst(s, i);
930  }
931  }
void interpolated_u_axi_nst(const Vector< double > &s, Vector< double > &veloc) const
Compute vector of FE interpolated velocity u at local coordinate s.
Definition: axisym_navier_stokes_elements.h:865

References DIM, i, oomph::AxisymmetricNavierStokesEquations::interpolated_u_axi_nst(), and s.

Referenced by oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::get_interpolated_values().

◆ ncont_interpolated_values()

unsigned oomph::RefineableAxisymmetricQCrouzeixRaviartElement::ncont_interpolated_values ( ) const
inlinevirtual

Number of continuously interpolated values: 3 (velocities)

Implements oomph::RefineableElement.

790  {
791  return 3;
792  }

◆ nrecovery_order()

unsigned oomph::RefineableAxisymmetricQCrouzeixRaviartElement::nrecovery_order ( )
inlinevirtual

Order of recovery shape functions for Z2 error estimation: Same order as shape functions.

Implements oomph::ElementWithZ2ErrorEstimator.

898  {
899  return 2;
900  }

Referenced by oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::nrecovery_order().

◆ nvertex_node()

unsigned oomph::RefineableAxisymmetricQCrouzeixRaviartElement::nvertex_node ( ) const
inlinevirtual

Number of vertex nodes in the element.

Implements oomph::ElementWithZ2ErrorEstimator.

904  {
906  }
virtual unsigned nvertex_node() const
Definition: elements.h:2491

References oomph::FiniteElement::nvertex_node().

◆ rebuild_from_sons()

void oomph::RefineableAxisymmetricQCrouzeixRaviartElement::rebuild_from_sons ( Mesh *&  mesh_pt)
inlinevirtual

Rebuild from sons: Reconstruct pressure from the (merged) sons.

Implements oomph::RefineableElement.

796  {
797  using namespace QuadTreeNames;
798 
799  // Central pressure value:
800  //-----------------------
801 
802  // Use average of the sons central pressure values
803  // Other options: Take average of the four (discontinuous)
804  // pressure values at the father's midpoint]
805 
806  double av_press = 0.0;
807 
808  // Loop over the sons
809  for (unsigned ison = 0; ison < 4; ison++)
810  {
811  // Add the sons midnode pressure
812  av_press += quadtree_pt()
813  ->son_pt(ison)
814  ->object_pt()
816  ->value(0);
817  }
818 
819  // Use the average
821 
822 
823  // Slope in s_0 direction
824  //----------------------
825 
826  // Use average of the 2 FD approximations based on the
827  // elements central pressure values
828  // [Other options: Take average of the four
829  // pressure derivatives]
830 
831  double slope1 = quadtree_pt()
832  ->son_pt(SE)
833  ->object_pt()
835  ->value(0) -
836  quadtree_pt()
837  ->son_pt(SW)
838  ->object_pt()
840  ->value(0);
841 
842  double slope2 = quadtree_pt()
843  ->son_pt(NE)
844  ->object_pt()
846  ->value(0) -
847  quadtree_pt()
848  ->son_pt(NW)
849  ->object_pt()
851  ->value(0);
852 
853 
854  // Use the average
856  ->set_value(1, 0.5 * (slope1 + slope2));
857 
858 
859  // Slope in s_1 direction
860  //----------------------
861 
862  // Use average of the 2 FD approximations based on the
863  // elements central pressure values
864  // [Other options: Take average of the four
865  // pressure derivatives]
866 
867  slope1 = quadtree_pt()
868  ->son_pt(NE)
869  ->object_pt()
871  ->value(0) -
872  quadtree_pt()
873  ->son_pt(SE)
874  ->object_pt()
876  ->value(0);
877 
878  slope2 = quadtree_pt()
879  ->son_pt(NW)
880  ->object_pt()
882  ->value(0) -
883  quadtree_pt()
884  ->son_pt(SW)
885  ->object_pt()
887  ->value(0);
888 
889 
890  // Use the average
892  ->set_value(2, 0.5 * (slope1 + slope2));
893  }
double value(const unsigned &i) const
Definition: nodes.h:293
Tree * son_pt(const int &son_index) const
Definition: tree.h:103

References oomph::GeneralisedElement::internal_data_pt(), oomph::QuadTreeNames::NE, oomph::QuadTreeNames::NW, oomph::Tree::object_pt(), oomph::AxisymmetricQCrouzeixRaviartElement::P_axi_nst_internal_index, oomph::RefineableQElement< 2 >::quadtree_pt(), oomph::QuadTreeNames::SE, oomph::Data::set_value(), oomph::Tree::son_pt(), oomph::QuadTreeNames::SW, and oomph::Data::value().

Referenced by oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::rebuild_from_sons().

◆ unpin_elemental_pressure_dofs()

void oomph::RefineableAxisymmetricQCrouzeixRaviartElement::unpin_elemental_pressure_dofs ( )
inlineprivatevirtual

Unpin all the internal pressure freedoms.

Implements oomph::RefineableAxisymmetricNavierStokesEquations.

769  {
770  unsigned n_pres = this->npres_axi_nst();
771  // loop over pressure dofs and unpin
772  for (unsigned l = 0; l < n_pres; l++)
773  {
775  }
776  }
unsigned npres_axi_nst() const
Return number of pressure values.
Definition: axisym_navier_stokes_elements.h:1308
void unpin(const unsigned &i)
Unpin the i-th stored variable.
Definition: nodes.h:391

References oomph::GeneralisedElement::internal_data_pt(), oomph::AxisymmetricQCrouzeixRaviartElement::npres_axi_nst(), oomph::AxisymmetricQCrouzeixRaviartElement::P_axi_nst_internal_index, and oomph::Data::unpin().

◆ vertex_node_pt()

Node* oomph::RefineableAxisymmetricQCrouzeixRaviartElement::vertex_node_pt ( const unsigned j) const
inlinevirtual

Pointer to the j-th vertex node in the element.

Implements oomph::ElementWithZ2ErrorEstimator.

910  {
912  }
virtual Node * vertex_node_pt(const unsigned &j) const
Definition: elements.h:2500
std::ptrdiff_t j
Definition: tut_arithmetic_redux_minmax.cpp:2

References j, and oomph::FiniteElement::vertex_node_pt().


The documentation for this class was generated from the following file: