Referenced by __attribute__(), Eigen::UmfPackLU< MatrixType_ >::_solve_impl(), Eigen::SparseLUTransposeView< Conjugate, SparseLUType >::_solve_impl(), Eigen::SparseLU< MatrixType_, OrderingType_ >::_solve_impl(), Eigen::internal::gemm_class< Scalar, is_unit_inc >::a_loads(), Eigen::SparseLU< MatrixType_, OrderingType_ >::absDeterminant(), Eigen::accurateDot(), RefineableConvectionProblem< NST_ELEMENT, AD_ELEMENT >::actions_after_adapt(), RefineableDrivenCavityProblem< ELEMENT >::actions_after_adapt(), TurekProblem< FLUID_ELEMENT, SOLID_ELEMENT >::actions_after_distribute(), ElasticInclinedPlaneProblem< ELEMENT, TIMESTEPPER >::actions_after_implicit_timestep(), oomph::IMRByBDF::actions_after_timestep(), ContactProblem< ELEMENT >::actions_before_implicit_timestep(), RefineableUnsteadyHeatProblem< ELEMENT >::actions_before_implicit_timestep(), FSIChannelWithLeafletProblem< ELEMENT >::actions_before_newton_convergence_check(), PoissonProblem< ELEMENT >::actions_before_newton_solve(), RefineableConvectionProblem< NST_ELEMENT, AD_ELEMENT >::actions_before_newton_solve(), oomph::NonLinearElasticitySmoothMesh< ELEMENT >::actions_before_newton_solve(), ForceLawsMPI2Test::actionsAfterSolve(), CFDDEMCoupleTest::actionsAfterTimeStep(), HeatFluidCoupledSpecies< NormalForceSpecies >::actionsAfterTimeStep(), SmoothChute::actionsBeforeTimeStep(), ForceLawsMPI2Test::actionsBeforeTimeStep(), oomph::YoungLaplaceContactAngleElement< ELEMENT >::actual_cos_contact_angle(), oomph::RefineableTetgenMesh< ELEMENT >::adapt(), oomph::RefineableGmshTetMesh< ELEMENT >::adapt(), oomph::TreeBasedRefineableMeshBase::adapt_mesh(), oomph::PeriodicOrbitAssemblyHandler< NNODE_1D >::adapt_temporal_mesh(), oomph::SpineAxisymmetricMarangoniSurfactantFluidInterfaceElement< ELEMENT >::add_additional_residual_contributions_interface(), oomph::SurfactantTransportInterfaceElement::add_additional_residual_contributions_interface(), oomph::NavierStokesImpedanceTractionElement< BULK_NAVIER_STOKES_ELEMENT, WOMERSLEY_ELEMENT, DIM >::add_element_contribution_to_aux_integral(), SpineGravityTractionElement< ELEMENT >::add_generic_residual_contribution(), ModalPoissonEquations< DIM >::add_generic_residual_contribution(), CombCanSpineMesh< ELEMENT, INTERFACE_ELEMENT >::add_line_interface_elements(), STSpineMesh< ELEMENT, INTERFACE_ELEMENT >::add_mesh(), CombCanSpineMesh< ELEMENT, INTERFACE_ELEMENT >::add_outlet_bulk_elements(), VariableBottom::add_particles(), Vreman::add_particles(), oomph::StefanBoltzmannRadiationBase::add_stefan_boltzmann_illumination_info(), ChuteWithPeriodicInflow::AddContinuingBottom(), Eigen::internal::addResults(), TriangleMeshWall::addZigZagDiagonalCells(), adjoint(), adjoint_extra(), adolc_forward_jacobian(), oomph::YoungLaplaceEquations::allocate_vector_of_vectors(), Eigen::internal::amd_mark(), Eigen::internal::amd_marked(), NavierStokesProblem< ELEMENT >::apply_boundary_conditions(), Eigen::internal::apply_rotation_in_the_plane(), MeshTriangle::applyForce(), Eigen::MatrixBase< Derived >::applyOnTheLeft(), Eigen::MatrixBase< Derived >::applyOnTheRight(), MeshTriangle::applyPressure(), Eigen::PermutationBase< Derived >::applyTranspositionOnTheLeft(), Eigen::PermutationBase< Derived >::applyTranspositionOnTheRight(), array_complex(), array_special_functions(), oomph::FiniteElement::assemble_eulerian_base_vectors(), oomph::RefineableElement::assemble_eulerian_base_vectors(), oomph::NavierStokesSchurComplementPreconditioner::assemble_inv_press_and_veloc_mass_matrix_diagonal(), oomph::FiniteElement::assemble_local_to_eulerian_jacobian(), oomph::RefineableElement::assemble_local_to_eulerian_jacobian(), oomph::FiniteElement::assemble_local_to_eulerian_jacobian2(), oomph::RefineableElement::assemble_local_to_eulerian_jacobian2(), oomph::SolidFiniteElement::assemble_local_to_lagrangian_jacobian(), oomph::RefineableSolidElement::assemble_local_to_lagrangian_jacobian(), oomph::SolidFiniteElement::assemble_local_to_lagrangian_jacobian2(), oomph::RefineableSolidElement::assemble_local_to_lagrangian_jacobian2(), oomph::TetMeshBase::assess_mesh_quality(), SpineGravityTractionElement< ELEMENT >::assign_additional_local_eqn_numbers(), oomph::ElementWithMovingNodes::assign_all_generic_local_eqn_numbers(), oomph::SpectralElement::assign_all_generic_local_eqn_numbers(), oomph::ElementWithExternalElement::assign_external_interaction_data_local_eqn_numbers(), oomph::RefineableElement::assign_hanging_local_eqn_numbers(), oomph::SelfStartingBDF2::assign_initial_data_values(), oomph::PeriodicOrbitTimeDiscretisation::assign_initial_data_values(), oomph::Steady< NSTEPS >::assign_initial_data_values(), oomph::BDF< NSTEPS >::assign_initial_data_values(), oomph::Newmark< 2 >::assign_initial_data_values(), oomph::Newmark< NSTEPS >::assign_initial_data_values(), oomph::Newmark< NSTEPS >::assign_initial_data_values_stage1(), oomph::Newmark< NSTEPS >::assign_initial_data_values_stage2(), oomph::Mesh::assign_initial_values_impulsive(), oomph::SelfStartingBDF2::assign_initial_values_impulsive(), oomph::Steady< NSTEPS >::assign_initial_values_impulsive(), oomph::Newmark< NSTEPS >::assign_initial_values_impulsive(), oomph::BDF< NSTEPS >::assign_initial_values_impulsive(), oomph::GeneralisedElement::assign_internal_and_external_local_eqn_numbers(), oomph::GeneralisedElement::assign_local_eqn_numbers(), oomph::FiniteElement::assign_nodal_local_eqn_numbers(), oomph::RefineableSolidElement::assign_solid_hanging_local_eqn_numbers(), oomph::SolidFiniteElement::assign_solid_local_eqn_numbers(), Eigen::internal::assign_sparse_to_sparse(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::assignDiagonal(), oomph::EulerEquations< DIM >::average_gradient(), oomph::DenseLU::backsub(), oomph::MumpsSolver::backsub(), oomph::NonLinearElasticitySmoothMesh< ELEMENT >::backup(), oomph::SolidICProblem::backup_original_state(), oomph::BackupMeshForProjection< GEOMETRIC_ELEMENT >::BackupMeshForProjection(), Eigen::Spline< Scalar_, Dim_, Degree_ >::BasisFunctionDerivativesImpl(), Eigen::Spline< Scalar_, Dim_, Degree_ >::BasisFunctions(), bench_eigengemm(), CRBond_Bessel::bessjyv(), Eigen::internal::bicgstabl(), binary_op_test(), oomph::BlackBoxFDNewtonSolver::black_box_fd_newton_solve(), Global_Parameters::blended_grad_velocity_pseudo_singularity_for_couette(), Eigen::TensorEvaluator< const TensorBroadcastingOp< Broadcast, ArgType >, Device >::block(), Eigen::TensorEvaluator< const TensorGeneratorOp< Generator, ArgType >, Device >::block(), Eigen::TensorEvaluator< const TensorPaddingOp< PaddingDimensions, ArgType >, Device >::block(), oomph::BlockPreconditioner< MATRIX >::block_matrix_test(), oomph::HelmholtzMGPreconditioner< DIM >::block_preconditioner_self_test(), oomph::BlockPreconditioner< MATRIX >::block_setup(), Eigen::internal::blueNorm_impl(), boxGetCorners(), NurbsUtils::bsplineBasis(), NurbsUtils::bsplineDerBasis(), NurbsUtils::bsplineOneBasis(), oomph::AddedMainNumberingLookup::build(), oomph::MyProblem::build(), oomph::ChannelSpineMesh< ELEMENT >::build_channel_spine_mesh(), oomph::QSpectralElement< 3, NNODE_1D >::build_face_element(), oomph::GmshTetMesh< ELEMENT >::build_from_scaffold(), oomph::GeompackQuadMesh< ELEMENT >::build_from_scaffold(), oomph::SimpleCubicTetMesh< ELEMENT >::build_from_scaffold(), oomph::TetgenMesh< ELEMENT >::build_from_scaffold(), oomph::TriangleMesh< ELEMENT >::build_from_scaffold(), oomph::QuadFromTriangleMesh< ELEMENT >::build_from_scaffold(), oomph::HorizontalSingleLayerSpineMesh< ELEMENT >::build_horizontal_single_layer_mesh(), oomph::AddedMainNumberingLookup::build_identity_map(), oomph::CircularCylindricalShellMesh< ELEMENT >::build_mesh(), oomph::BackwardStepQuadMesh< ELEMENT >::build_mesh(), oomph::HermiteQuadMesh< ELEMENT >::build_mesh(), oomph::SimpleCubicMesh< ELEMENT >::build_mesh(), oomph::BrickFromTetMesh< ELEMENT >::build_mesh(), MyCanyonMesh< ELEMENT, INTERFACE_ELEMENT >::build_single_layer_mesh(), MyTipMesh< ELEMENT, INTERFACE_ELEMENT >::build_single_layer_mesh(), oomph::SingleLayerCubicSpineMesh< ELEMENT >::build_single_layer_mesh(), oomph::SingleLayerSpineMesh< ELEMENT >::build_single_layer_mesh(), oomph::TetgenMesh< ELEMENT >::build_tetgenio(), oomph::TwoLayerSpineMesh< BASE_ELEMENT >::build_two_layer_mesh(), buildProblem(), c2fstrv(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >::calc_colcount(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >::calc_etree(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >::calc_hadj_inner(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >::calc_hadj_outer(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >::calc_lineage(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >::calc_post(), oomph::ConstitutiveLaw::calculate_d_second_piola_kirchhoff_stress_dG(), oomph::HomogenisedLinearElasticityEquations< DIM >::calculate_effective_modulus(), oomph::BDF< NSTEPS >::calculate_predicted_positions(), oomph::TR::calculate_predicted_positions(), oomph::SelfStartingBDF2::calculate_predicted_positions_bdf2(), oomph::BDF< NSTEPS >::calculate_predicted_values(), oomph::TR::calculate_predicted_values(), oomph::SelfStartingBDF2::calculate_predicted_values_bdf2(), oomph::Mesh::calculate_predictions(), oomph::Problem::calculate_predictions(), oomph::AnisotropicHookean::calculate_second_piola_kirchhoff_stress(), oomph::GeneralisedHookean::calculate_second_piola_kirchhoff_stress(), oomph::IsotropicStrainEnergyFunctionConstitutiveLaw::calculate_second_piola_kirchhoff_stress(), HGridOptimiser::calculateDiffWork(), HGridOptimiser::calculateWork(), Eigen::MatrixBase< Derived >::canonicalEulerAngles(), Eigen::cauchy_min_bound(), CRBond_Bessel::cbessjyva(), check_aligned_malloc(), check_aligned_new(), check_aligned_stack_alloc(), check_all_var(), oomph::Mesh::check_for_repeated_nodes(), check_handmade_aligned_malloc(), check_indexed_view(), oomph::FaceElement::check_J_eulerian_at_knots(), oomph::FiniteElement::check_jacobian(), check_locate_zeta(), oomph::TriangleScaffoldMesh::check_mesh_integrity(), oomph::MyProblem::check_not_segregated(), check_sparse_inverse(), check_tutorial_examples(), MeshTriangle::checkInteractions(), checkOptimalTraversal_impl(), Eigen::internal::chkder(), ChuteWithContraction::ChuteWithContraction(), ChuteWithPeriodicInflowAndContinuingBottom::ChuteWithPeriodicInflowAndContinuingBottom(), ChuteWithPeriodicInflowAndContraction::ChuteWithPeriodicInflowAndContraction(), ChuteWithPeriodicInflowAndVariableBottom::ChuteWithPeriodicInflowAndVariableBottom(), oomph::InexactSubBiharmonicPreconditioner::clean_up_memory(), oomph::GeneralPurposeBlockPreconditioner< MATRIX >::clean_up_memory(), oomph::BlockTriangularPreconditioner< MATRIX >::clean_up_memory(), oomph::PseudoElasticPreconditionerSubsidiaryBlockPreconditionerOld::clean_up_memory(), oomph::HelmholtzMGPreconditioner< DIM >::clean_up_memory(), oomph::BandedBlockTriangularPreconditioner< MATRIX >::clean_up_memory(), oomph::UpperTriangular< MATRIX >::clean_up_my_memory(), oomph::TwoPlusThreeUpperTriangularWithReplace< MATRIX >::clean_up_my_memory(), oomph::CoarseTwoPlusTwoPlusOne< MATRIX >::clean_up_my_memory(), oomph::OnePlusFourWithTwoCoarse< MATRIX >::clean_up_my_memory(), PeriodicBoundaryHandler::clearCommunicationLists(), Eigen::BlockVectorView< BlockSparseMatrixT, VectorType >::coeff(), Eigen::internal::evaluator< PartialReduxExpr< ArgType, MemberOp, Direction > >::coeff(), Eigen::Select< ConditionMatrixType, ThenMatrixType, ElseMatrixType >::coeff(), Eigen::BlockVectorReturn< BlockSparseMatrixT, VectorType >::coeffRef(), Eigen::internal::cofactor_3x3(), Eigen::internal::cofactor_4x4(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::collapseDuplicates(), oomph::CollapsibleChannelMesh< ELEMENT >::CollapsibleChannelMesh(), PeriodicBoundaryHandler::collectGhostParticleData(), Eigen::internal::colVecColLoopBody(), colVSXVecColLoopBody(), commandLineCG(), compare_using_data_and_stride(), PacketBlockSet< Scalar, StorageOrder, n >::comparePacketBlock(), comparisons(), InclinedPlaneProblem< ELEMENT, INTERFACE_ELEMENT >::complete_build(), UnstructuredFvKProblem< ELEMENT >::complete_problem_setup(), DarcyProblem< ELEMENT >::complete_problem_setup(), MeltContactProblem< ELEMENT >::complete_problem_setup(), SolarRadiationProblem< ELEMENT >::complete_problem_setup(), ContactProblem< ELEMENT >::complete_problem_setup(), UnsteadyHeatMeltProblem< ELEMENT >::complete_problem_setup(), oomph::FourierDecomposedHelmholtzDtNBoundaryElement< ELEMENT >::complete_setup_of_dependencies(), oomph::HelmholtzDtNBoundaryElement< ELEMENT >::complete_setup_of_dependencies(), oomph::ComplexGMRES< MATRIX >::complex_solve_helper(), Eigen::GeneralizedEigenSolver< MatrixType_ >::compute(), Eigen::ArpackGeneralizedSelfAdjointEigenSolver< MatrixType, MatrixSolver, BisSPD >::compute(), Eigen::SPQR< MatrixType_ >::compute(), oomph::NavierStokesEquations< 2 >::compute_error(), oomph::InexactSubBiharmonicPreconditioner::compute_inexact_schur_complement(), Eigen::TensorSycl::internal::GeneralVectorTensor< OutScalar, OutAccessor, VectorMapper, TensorMapper, StorageIndex, Properties, KFactor, Vectorizable, is_lhs_vec, IsFinal >::compute_panel(), oomph::AxisymmetricPVDEquations::compute_physical_size(), oomph::AxisymmetricPVDEquationsWithPressure::compute_physical_size(), oomph::QSUPGAdvectionDiffusionElement< DIM, NNODE_1D >::compute_stabilisation_parameter(), VolumeCoupling::computeCouplingForce(), VolumeCoupling::computeCouplingOnFEM(), PSD::computeD50(), Eigen::ColPivHouseholderQR< MatrixType_, PermutationIndex_ >::computeInPlace(), Eigen::RealSchur< MatrixType_ >::computeNormOfT(), Eigen::RealQZ< MatrixType_ >::computeNorms(), oomph::CRDoubleMatrixHelpers::concatenate(), oomph::DoubleVectorHelpers::concatenate(), oomph::CRDoubleMatrixHelpers::concatenate_without_communication(), Eigen::internal::conservative_sparse_sparse_product_impl(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::conservativeResize(), oomph::AddedMainNumberingLookup::construct_reverse_mapping(), oomph::OcTree::construct_rotation_matrix(), oomph::YoungLaplaceContactAngleElement< ELEMENT >::contact_line_vectors(), ContactProblem< ELEMENT >::ContactProblem(), oomph::FaceElement::continuous_tangent_and_outer_unit_normal(), contraction_rhs_transposed(), ContractionWithPeriodicInflow::ContractionWithPeriodicInflow(), ConvectionProblem< NST_ELEMENT, AD_ELEMENT >::ConvectionProblem(), Eigen::internal::convertArrayBF16toF32(), Eigen::internal::convertArrayF32toBF16Col(), Eigen::internal::convertArrayF32toBF16ColVSX(), Eigen::internal::convertArrayPointerBF16toF32DupOne(), HorizontalBaseScrew::convertLimits(), Multipole::convertMultipoleToLocal(), Eigen::TensorEvaluator< const TensorConvolutionOp< Indices, InputArgType, KernelArgType >, Device >::convolve(), Eigen::TensorEvaluator< const TensorConvolutionOp< Indices, InputArgType, KernelArgType >, Device >::convolvePacket(), oomph::Data::copy(), oomph::Node::copy(), oomph::SolidNode::copy(), oomph::MapMatrixMixed< KEY_TYPE_ROW, KEY_TYPE_COL, VALUE_TYPE >::copy_column(), CFile::copy_data(), oomph::LinearisedQCrouzeixRaviartElement::copy_efunction_to_normalisation(), CFile::copy_fstat(), c_interface_base< real >::copy_matrix(), Eigen::internal::SparseLUImpl< Scalar, StorageIndex >::countnz(), Eigen::internal::covar(), RandomImpl< Eigen::SparseMatrix< Scalar, Options, DenseIndex > >::Create(), oomph::TwoDimensionalPMLHelper::create_bottom_left_pml_mesh(), oomph::TwoDimensionalPMLHelper::create_bottom_pml_mesh(), oomph::TwoDimensionalPMLHelper::create_bottom_right_pml_mesh(), ContactProblem< ELEMENT >::create_displ_imposition_elements(), create_fluid_and_solid_surface_mesh_from_fluid_xda_mesh(), TurekProblem< FLUID_ELEMENT, SOLID_ELEMENT >::create_fsi_traction_elements(), oomph::HypreHelpers::create_HYPRE_Matrix(), oomph::HypreHelpers::create_HYPRE_Vector(), UnstructuredTorusProblem< ELEMENT >::create_lagrange_multiplier_elements(), FSICollapsibleChannelProblem< ELEMENT >::create_lagrange_multiplier_elements(), PseudoElasticCollapsibleChannelProblem< FLUID_ELEMENT, SOLID_ELEMENT >::create_lagrange_multiplier_elements(), FSIChannelWithLeafletProblem< ELEMENT >::create_lagrange_multiplier_elements(), UnstructuredFSIProblem< FLUID_ELEMENT, SOLID_ELEMENT >::create_lagrange_multiplier_elements(), PrescribedBoundaryDisplacementProblem< ELEMENT >::create_lagrange_multiplier_elements(), UnstructuredImmersedEllipseProblem< ELEMENT >::create_lagrange_multiplier_elements(), UnstructuredFluidProblem< ELEMENT >::create_lagrange_multiplier_elements(), CollapsibleChannelProblem< ELEMENT >::create_lagrange_multiplier_elements(), oomph::TwoDimensionalPMLHelper::create_left_pml_mesh(), StefanBoltzmannProblem< ELEMENT >::create_melt_elements(), oomph::GmshTetScaffoldMesh::create_mesh_from_msh_file(), TiltedCavityProblem< ELEMENT >::create_parall_outflow_lagrange_elements(), oomph::TwoDimensionalPMLHelper::create_right_pml_mesh(), oomph::TwoDimensionalPMLHelper::create_top_left_pml_mesh(), oomph::TwoDimensionalPMLHelper::create_top_pml_mesh(), oomph::TwoDimensionalPMLHelper::create_top_right_pml_mesh(), BaseCluster::createAdjacencyMatrix(), VariableBottom::createBottom(), FlowRule::createBottom(), Chute::createBottom(), CurvyChute::createBottom(), TriangleMeshWall::createFourPointMesh(), Domain::createLookUpTable(), TriangleMeshWall::createParallelogramMesh(), LevelSetWall::createVTK(), LevelSetWall::createVTKSphere(), MercuryProblem::createWalls(), Eigen::internal::cs_tdfs(), csr_sum_duplicates(), oomph::QElement< 2, NNODE_1D >::d2shape_local(), oomph::QElement< 3, NNODE_1D >::d2shape_local(), oomph::FiniteElement::d_dshape_eulerian_dnodal_coordinates_templated_helper(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::d_kin_energy_dt(), oomph::SpaceTimeNavierStokesEquations< DIM >::d_kin_energy_dt(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::d_kin_energy_dt(), oomph::SphericalNavierStokesEquations::d_kin_energy_dt(), oomph::FourierDecomposedHelmholtzBCElementBase< ELEMENT >::d_shape_and_test_local(), oomph::HelmholtzBCElementBase< ELEMENT >::d_shape_and_test_local(), oomph::PMLFourierDecomposedHelmholtzPowerMonitorElement< ELEMENT >::d_shape_and_test_local(), Eigen::TensorEvaluator< const TensorSlicingOp< StartIndices, Sizes, ArgType >, Device >::data(), oomph::ProjectableLinearHeatAndElasticityElement< LINEAR_HEAT_AND_ELAST_ELEMENT >::data_values_of_field(), oomph::ProjectableAdvectionDiffusionReactionElement< ADR_ELEMENT >::data_values_of_field(), oomph::ProjectableAxisymLinearElasticityElement< AXISYM_LINEAR_ELAST_ELEMENT >::data_values_of_field(), oomph::ProjectableAxisymmetricTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::data_values_of_field(), oomph::ProjectableAxisymmetricCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::data_values_of_field(), oomph::ProjectableAxisymmetricPoroelasticityElement< AXISYMMETRIC_POROELASTICITY_ELEMENT >::data_values_of_field(), oomph::ProjectableDarcyElement< DARCY_ELEMENT >::data_values_of_field(), oomph::ProjectableDisplacementBasedFoepplvonKarmanElement< FVK_ELEMENT >::data_values_of_field(), oomph::ProjectableFoepplvonKarmanElement< FVK_ELEMENT >::data_values_of_field(), oomph::ProjectableFourierDecomposedHelmholtzElement< FOURIER_DECOMPOSED_HELMHOLTZ_ELEMENT >::data_values_of_field(), oomph::GeneralisedNewtonianProjectableAxisymmetricTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::data_values_of_field(), oomph::GeneralisedNewtonianProjectableAxisymmetricCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::data_values_of_field(), oomph::ProjectableGeneralisedNewtonianTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::data_values_of_field(), oomph::ProjectableGeneralisedNewtonianCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::data_values_of_field(), oomph::GenericLagrangeInterpolatedProjectableElement< ELEMENT >::data_values_of_field(), oomph::ProjectableHelmholtzElement< HELMHOLTZ_ELEMENT >::data_values_of_field(), oomph::ProjectableLinearElasticityElement< LINEAR_ELAST_ELEMENT >::data_values_of_field(), oomph::ProjectableTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::data_values_of_field(), oomph::ProjectableCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::data_values_of_field(), oomph::ProjectablePMLFourierDecomposedHelmholtzElement< FOURIER_DECOMPOSED_HELMHOLTZ_ELEMENT >::data_values_of_field(), oomph::ProjectablePMLHelmholtzElement< HELMHOLTZ_ELEMENT >::data_values_of_field(), oomph::ProjectablePMLTimeHarmonicLinearElasticityElement< TIME_HARMONIC_LINEAR_ELAST_ELEMENT >::data_values_of_field(), oomph::ProjectablePoissonElement< POISSON_ELEMENT >::data_values_of_field(), oomph::ProjectablePVDElementWithContinuousPressure< PVD_ELEMENT >::data_values_of_field(), oomph::ProjectableTaylorHoodSpaceTimeElement< TAYLOR_HOOD_ELEMENT >::data_values_of_field(), oomph::ProjectableTaylorHoodMixedOrderSpaceTimeElement< TAYLOR_HOOD_ELEMENT >::data_values_of_field(), oomph::ProjectableUnsteadyHeatSpaceTimeElement< UNSTEADY_HEAT_ELEMENT >::data_values_of_field(), oomph::ProjectableUnsteadyHeatMixedOrderSpaceTimeElement< UNSTEADY_HEAT_ELEMENT >::data_values_of_field(), oomph::ProjectableTimeHarmonicFourierDecomposedLinearElasticityElement< TIME_HARMONIC_LINEAR_ELAST_ELEMENT >::data_values_of_field(), oomph::ProjectableTimeHarmonicLinearElasticityElement< TIME_HARMONIC_LINEAR_ELAST_ELEMENT >::data_values_of_field(), oomph::ProjectableUnsteadyHeatElement< UNSTEADY_HEAT_ELEMENT >::data_values_of_field(), Eigen::BDCSVD< MatrixType_, Options_ >::deflation(), Eigen::BDCSVD< MatrixType_, Options_ >::deflation44(), tetgenio::deinitialize(), oomph::Mesh::delete_all_external_storage(), demo_smoothing_with_nonlinear_elasticity(), oomph::DenseMatrix< T >::DenseMatrix(), Eigen::SparseLU< MatrixType_, OrderingType_ >::determinant(), Eigen::SuperLU< MatrixType_ >::determinant(), determinant(), Eigen::NumericalDiff< Functor_, mode >::df(), DenseLM< Scalar >::df(), hybrj_functor::df(), oomph::FluxTransportEquations< DIM >::dflux_du(), oomph::ScalarAdvectionEquations< DIM >::dflux_du(), Eigen::DGMRES< MatrixType_, Preconditioner_ >::dgmresComputeDeflationData(), diagonalmatrices(), Domain::disableBoundaries(), DiskOscillationProblem< ELEMENT >::DiskOscillationProblem(), DiskShockWaveProblem< ELEMENT, TIMESTEPPER >::DiskShockWaveProblem(), oomph::DiskTetMeshFacetedSurface::DiskTetMeshFacetedSurface(), oomph::DiskWithTorusAroundEdgeTetMeshFacetedSurface::DiskWithTorusAroundEdgeTetMeshFacetedSurface(), oomph::DiskWithTwoLayersTetMeshFacetedSurface::DiskWithTwoLayersTetMeshFacetedSurface(), oomph::DisplacementControlElement::DisplacementControlElement(), oomph::AxisymmetricNavierStokesEquations::dissipation(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::dissipation(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::dissipation(), oomph::NavierStokesEquations< DIM >::dissipation(), oomph::PolarNavierStokesEquations::dissipation(), oomph::SpaceTimeNavierStokesEquations< DIM >::dissipation(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::dissipation(), oomph::SphericalNavierStokesEquations::dissipation(), LiquidMigrationLSInteraction::distributeToOtherBridges(), LiquidMigrationWilletInteraction::distributeToOtherBridges(), oomph::FiniteElement::dJ_eulerian_dnodal_coordinates_templated_helper(), oomph::LinearisedAxisymmetricNavierStokesEquations::dkin_energy_dt(), oomph::FiniteElement::dnodal_position_dt(), oomph::FiniteElement::dnodal_position_gen_dt(), DiskShockWaveProblem< ELEMENT, TIMESTEPPER >::doc_displ_and_veloc(), oomph::FSI_functions::doc_fsi(), DarcyProblem< ELEMENT >::doc_shape_functions(), UnstructuredFvKProblem< ELEMENT >::doc_solution(), MeltContactProblem< ELEMENT >::doc_solution(), ContactProblem< ELEMENT >::doc_solution(), UnsteadyHeatMeltProblem< ELEMENT >::doc_solution(), StefanBoltzmannProblem< ELEMENT >::doc_solution(), DiskShockWaveProblem< ELEMENT, TIMESTEPPER >::doc_solution(), RefineableDrivenCavityProblem< ELEMENT >::doc_solution(), PoissonProblem< ELEMENT >::doc_solution(), FallingBlockProblem< ELEMENT >::doc_solution(), RisingBubbleProblem< ELEMENT >::doc_solution(), PRefineableDrivenCavityProblem< ELEMENT >::doc_solution(), StaticDiskCompressionProblem< ELEMENT >::doc_solution(), DiskOscillationProblem< ELEMENT >::doc_solution(), SimpleShearProblem< ELEMENT >::doc_solution(), oomph::FpPressureAdvectionDiffusionProblem< ELEMENT >::doc_solution(), Eigen::EigenSolver< MatrixType_ >::doComputeEigenvectors(), oomph::Mesh::does_pointer_correspond_to_mesh_data(), Eigen::internal::dogleg(), Eigen::SparseMatrixBase< Derived >::dot(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::dpdx_fe_only(), oomph::FSIHermiteBeamElement::dposition_dlagrangian_at_local_coordinate(), oomph::FSIDiagHermiteShellElement::dposition_dlagrangian_at_local_coordinate(), oomph::Node::dposition_dt(), AxisymOscillatingDisk::dposition_dt(), oomph::GeomObject::dposition_dt(), oomph::PseudoBucklingRing::dposition_dt(), oomph::ImmersedRigidBodyElement::dposition_dt(), oomph::Node::dposition_gen_dt(), oomph::GeneralisedNewtonianQTaylorHoodElement< DIM >::dpshape_and_dptest_eulerian_nst(), oomph::QTaylorHoodElement< DIM >::dpshape_and_dptest_eulerian_nst(), oomph::QTaylorHoodSpaceTimeElement< DIM >::dpshape_and_dptest_eulerian_nst(), oomph::QTaylorHoodSpaceTimeElement< DIM >::dpshape_eulerian(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::dpshape_eulerian(), oomph::QTaylorHoodSpaceTimeElement< DIM >::dptest_eulerian(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::dptest_eulerian(), oomph::QAdvectionDiffusionElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_adv_diff(), oomph::QSUPGAdvectionDiffusionElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_adv_diff(), oomph::QSteadyAxisymAdvectionDiffusionElement< NNODE_1D >::dshape_and_dtest_eulerian_adv_diff(), oomph::QAdvectionDiffusionReactionElement< NREAGENT, DIM, NNODE_1D >::dshape_and_dtest_eulerian_adv_diff_react(), oomph::QSUPGAdvectionDiffusionElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_at_knot_adv_diff(), oomph::QAxisymAdvectionDiffusionElement< NNODE_1D >::dshape_and_dtest_eulerian_axi_adv_diff(), oomph::QGeneralisedAdvectionDiffusionElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_cons_adv_diff(), QGeneralisedAxisymAdvectionDiffusionElement< NNODE_1D >::dshape_and_dtest_eulerian_cons_axisym_adv_diff(), oomph::QSpectralEulerElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_flux_transport(), oomph::QSpectralScalarAdvectionElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_flux_transport(), oomph::QScalarAdvectionElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_flux_transport(), oomph::QLinearWaveElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_lin_wave(), oomph::QTaylorHoodSpaceTimeElement< DIM >::dshape_and_dtest_eulerian_nst(), oomph::QSpectralPoissonElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_poisson(), oomph::QSphericalAdvectionDiffusionElement< NNODE_1D >::dshape_and_dtest_eulerian_spherical_adv_diff(), oomph::QUnsteadyHeatElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_ust_heat(), oomph::TWomersleyElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_womersley(), oomph::QWomersleyElement< DIM, NNODE_1D >::dshape_and_dtest_eulerian_womersley(), oomph::PRefineableQElement< 2, INITIAL_NNODE_1D >::dshape_local(), oomph::PRefineableQElement< 3, INITIAL_NNODE_1D >::dshape_local(), oomph::QElement< 2, NNODE_1D >::dshape_local(), oomph::QElement< 3, NNODE_1D >::dshape_local(), oomph::QSpectralElement< 2, NNODE_1D >::dshape_local(), oomph::QSpectralElement< 3, NNODE_1D >::dshape_local(), oomph::ClampedHermiteShellBoundaryConditionElement::dshape_local(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::dshape_local_u_nst(), oomph::QUnsteadyHeatMixedOrderSpaceTimeElement< SPATIAL_DIM, NNODE_1D >::dshape_local_ust_heat(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::dtest_local_u_nst(), oomph::QUnsteadyHeatMixedOrderSpaceTimeElement< SPATIAL_DIM, NNODE_1D >::dtest_local_ust_heat(), oomph::DummyErrorEstimator::DummyErrorEstimator(), oomph::Data::dump(), oomph::Node::dump(), oomph::SolidNode::dump(), oomph::Node::dx_dt(), oomph::Node::dx_gen_dt(), oomph::LinearElasticityEquationsBase< DIM >::E(), oomph::PMLTimeHarmonicLinearElasticityEquationsBase< DIM >::E(), oomph::PoroelasticityEquations< DIM >::E(), oomph::TimeHarmonicLinearElasticityEquationsBase< DIM >::E(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::edge_flux_interpolation_point(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::edge_flux_interpolation_point_global(), oomph::TRaviartThomasDarcyElement< ORDER >::edge_flux_interpolation_point_global(), oomph::DenseDoubleMatrix::eigenvalues_by_jacobi(), Eigen::EigenSolver< MatrixType_ >::eigenvectors(), oomph::EighthSphereMesh< ELEMENT >::EighthSphereMesh(), eiToDense(), eiToGmm(), eiToMtl(), eiToUblas(), eiToUblasVec(), ElasticQuadFromTriangleMesh< ELEMENT >::ElasticQuadFromTriangleMesh(), ElasticTetMesh< ELEMENT >::ElasticTetMesh(), ElasticTriangleMesh< ELEMENT >::ElasticTriangleMesh(), oomph::TwoLayerPerturbedSpineMesh< ELEMENT >::element_reorder(), oomph::ChannelSpineMesh< ELEMENT >::element_reorder(), oomph::RectangularQuadMesh< ELEMENT >::element_reorder(), encode(), UnsteadyHeatProblem< ELEMENT >::enforce_time_periodic_boundary_conditions(), oomph::CRDoubleMatrix::entries_are_sorted(), oomph::DenseMatrix< T >::entry(), oomph::MapMatrixMixed< KEY_TYPE_ROW, KEY_TYPE_COL, VALUE_TYPE >::entry_pt(), EntryFlowProblem< ELEMENT >::EntryFlowProblem(), equalsIdentity(), Eigen::MatrixBase< Derived >::eulerAngles(), eulerangles_manual(), evalSolverSugarFunction(), Eigen::KroneckerProduct< Lhs, Rhs >::evalTo(), Eigen::KroneckerProductSparse< Lhs, Rhs >::evalTo(), Eigen::SparseQR_QProduct< SparseQRType, Derived >::evalTo(), Eigen::TensorEvaluator< const TensorFFTOp< FFT, ArgType, FFTResultType, FFTDir >, Device >::evalToBuf(), NurbsSurface::evaluateDerivatives(), oomph::YoungLaplaceEquations::exact_position(), oomph::ConstraintElement::ext_eqn(), oomph::PVDEquations< DIM >::extended_output(), oomph::PVDEquationsWithPressure< DIM >::extended_output(), ChuteWithPeriodicInflow::ExtendInWidth(), oomph::ElementElementConstraintElement::extern_data_eqn(), oomph::GeneralisedElement::external_local_eqn(), oomph::SphericalNavierStokesEquations::extract_velocity(), Eigen::SuperLUBase< MatrixType_, Derived >::extractData(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::extrapolated_strain_rate(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::extrapolated_strain_rate(), extrapolated_strain_rate(), f2cstrv(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::face_index_of_edge(), oomph::TRaviartThomasDarcyElement< ORDER >::face_index_of_edge(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::face_index_of_q_edge_basis_fct(), oomph::TRaviartThomasDarcyElement< ORDER >::face_index_of_q_edge_basis_fct(), oomph::TetMeshFacetedSurface::facet_pt(), oomph::DenseLU::factorise(), Eigen::SparseQR< MatrixType_, OrderingType_ >::factorize(), Eigen::IncompleteLUT< Scalar_, StorageIndex_ >::factorize(), Eigen::IncompleteCholesky< Scalar, UpLo_, OrderingType_ >::factorize(), Eigen::DiagonalPreconditioner< Scalar_ >::factorize(), Eigen::LeastSquareDiagonalPreconditioner< Scalar_ >::factorize(), FancySpheres::FancySpheres(), Eigen::internal::fdjac1(), RefineableBinArray::fill_bin_array(), NonRefineableBinArray::fill_bin_by_diffusion(), oomph::AxisymmetricNavierStokesEquations::fill_in_contribution_to_hessian_vector_products(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::fill_in_contribution_to_hessian_vector_products(), oomph::IMRODEElement::fill_in_contribution_to_jacobian(), oomph::PVDEquationsWithPressure< DIM >::fill_in_contribution_to_jacobian_and_mass_matrix(), oomph::ImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::fill_in_contribution_to_jacobian_and_mass_matrix(), oomph::FSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::fill_in_contribution_to_jacobian_and_mass_matrix(), oomph::ODEElement::fill_in_contribution_to_mass_matrix(), oomph::ConstraintElement::fill_in_contribution_to_residuals(), oomph::IMRODEElement::fill_in_contribution_to_residuals(), oomph::DisplacementBasedFoepplvonKarmanEquations::fill_in_contribution_to_residuals(), oomph::FoepplvonKarmanEquations::fill_in_contribution_to_residuals(), oomph::ODEElement::fill_in_contribution_to_residuals(), oomph::ClampedHermiteShellBoundaryConditionElement::fill_in_contribution_to_residuals(), oomph::RefineableYoungLaplaceEquations::fill_in_contribution_to_residuals(), oomph::YoungLaplaceEquations::fill_in_contribution_to_residuals(), oomph::FSIAxisymmetricLinearElasticityTractionElement< ELASTICITY_BULK_ELEMENT, NAVIER_STOKES_BULK_ELEMENT >::fill_in_contribution_to_residuals_axisym_fsi_traction(), oomph::AxisymmetricPoroelasticityTractionElement< ELEMENT >::fill_in_contribution_to_residuals_axisym_poroelasticity_face(), oomph::AxisymmetricPVDEquations::fill_in_contribution_to_residuals_axisym_pvd(), oomph::AxisymmetricLinearElasticityTractionElement< ELEMENT >::fill_in_contribution_to_residuals_axisymmetric_linear_elasticity_traction(), oomph::AxisymmetricNavierStokesTractionElement< ELEMENT >::fill_in_contribution_to_residuals_axisymmetric_nst_traction(), oomph::KirchhoffLoveBeamEquations::fill_in_contribution_to_residuals_beam(), oomph::DarcyFaceElement< ELEMENT >::fill_in_contribution_to_residuals_darcy_face(), oomph::PoroelasticityFaceElement< ELEMENT >::fill_in_contribution_to_residuals_darcy_face(), oomph::FourierDecomposedTimeHarmonicLinElastLoadedByHelmholtzPressureBCElement< ELASTICITY_BULK_ELEMENT, HELMHOLTZ_BULK_ELEMENT >::fill_in_contribution_to_residuals_helmholtz_traction(), oomph::TimeHarmonicLinElastLoadedByHelmholtzPressureBCElement< ELASTICITY_BULK_ELEMENT, HELMHOLTZ_BULK_ELEMENT >::fill_in_contribution_to_residuals_helmholtz_traction(), oomph::TimeHarmonicLinElastLoadedByPMLHelmholtzPressureBCElement< ELASTICITY_BULK_ELEMENT, HELMHOLTZ_BULK_ELEMENT >::fill_in_contribution_to_residuals_helmholtz_traction(), oomph::LinearElasticityTractionElement< ELEMENT >::fill_in_contribution_to_residuals_linear_elasticity_traction(), oomph::KirchhoffLoveShellEquations::fill_in_contribution_to_residuals_shell(), oomph::SolidTractionElement< ELEMENT >::fill_in_contribution_to_residuals_solid_traction(), oomph::NonlinearSurfaceContactElement< ELEMENT >::fill_in_contribution_to_residuals_surface_contact(), oomph::LinearSurfaceContactElement< ELEMENT >::fill_in_contribution_to_residuals_surface_contact(), oomph::HeatedLinearSurfaceContactElement< ELEMENT >::fill_in_contribution_to_residuals_surface_contact(), oomph::SurfaceMeltElement< ELEMENT >::fill_in_contribution_to_residuals_surface_melt(), oomph::TimeHarmonicFourierDecomposedLinearElasticityTractionElement< ELEMENT >::fill_in_contribution_to_residuals_time_harmonic_fourier_decomposed_linear_elasticity_traction(), oomph::PMLTimeHarmonicLinearElasticityTractionElement< ELEMENT >::fill_in_contribution_to_residuals_time_harmonic_linear_elasticity_traction(), oomph::TimeHarmonicLinearElasticityTractionElement< ELEMENT >::fill_in_contribution_to_residuals_time_harmonic_linear_elasticity_traction(), oomph::SingularNavierStokesSolutionElement< WRAPPED_NAVIER_STOKES_ELEMENT >::fill_in_generic_contribution_to_residuals(), SingularPoissonSolutionElement< WRAPPED_POISSON_ELEMENT >::fill_in_generic_contribution_to_residuals(), oomph::AxisymmetricLinearElasticityEquations::fill_in_generic_contribution_to_residuals_axisymmetric_linear_elasticity(), oomph::ImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::fill_in_generic_contribution_to_residuals_displ_lagr_multiplier(), oomph::TimeHarmonicFourierDecomposedLinearElasticityEquations::fill_in_generic_contribution_to_residuals_fourier_decomp_time_harmonic_linear_elasticity(), oomph::FSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::fill_in_generic_contribution_to_residuals_fsi_displ_lagr_multiplier(), oomph::HomogenisedLinearElasticityEquations< DIM >::fill_in_generic_contribution_to_residuals_linear_elasticity(), oomph::LinearElasticityEquations< DIM >::fill_in_generic_contribution_to_residuals_linear_elasticity(), oomph::RefineableLinearElasticityEquations< DIM >::fill_in_generic_contribution_to_residuals_linear_elasticity(), oomph::ImposeImpenetrabilityElement< ELEMENT >::fill_in_generic_contribution_to_residuals_parall_lagr_multiplier(), oomph::ImposeParallelOutflowElement< ELEMENT >::fill_in_generic_contribution_to_residuals_parall_lagr_multiplier(), oomph::RefineableQDPVDElement< DIM, NNODE_1D >::fill_in_generic_contribution_to_residuals_pvd(), oomph::RefineablePVDEquations< DIM >::fill_in_generic_contribution_to_residuals_pvd(), oomph::PVDEquations< DIM >::fill_in_generic_contribution_to_residuals_pvd(), oomph::ScaleCoupledElement< ELEMENT >::fill_in_generic_contribution_to_residuals_pvd(), oomph::VolumeCoupledElement< ELEMENT >::fill_in_generic_contribution_to_residuals_pvd(), oomph::PMLTimeHarmonicLinearElasticityEquations< DIM >::fill_in_generic_contribution_to_residuals_time_harmonic_linear_elasticity(), oomph::RefineableTimeHarmonicLinearElasticityEquations< DIM >::fill_in_generic_contribution_to_residuals_time_harmonic_linear_elasticity(), oomph::TimeHarmonicLinearElasticityEquations< DIM >::fill_in_generic_contribution_to_residuals_time_harmonic_linear_elasticity(), oomph::AxisymmetricNavierStokesEquations::fill_in_generic_dresidual_contribution_axi_nst(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::fill_in_generic_dresidual_contribution_axi_nst(), oomph::AxisymmetricPoroelasticityEquations::fill_in_generic_residual_contribution(), oomph::PolarNavierStokesEquations::fill_in_generic_residual_contribution(), oomph::RefineablePolarNavierStokesEquations::fill_in_generic_residual_contribution(), oomph::RefineablePolarStreamfunctionEquations::fill_in_generic_residual_contribution(), oomph::PolarStreamfunctionEquations::fill_in_generic_residual_contribution(), oomph::AdvectionDiffusionEquations< DIM >::fill_in_generic_residual_contribution_adv_diff(), oomph::RefineableAdvectionDiffusionEquations< DIM >::fill_in_generic_residual_contribution_adv_diff(), oomph::SteadyAxisymAdvectionDiffusionEquations::fill_in_generic_residual_contribution_adv_diff(), oomph::AdvectionDiffusionReactionEquations< NREAGENT, DIM >::fill_in_generic_residual_contribution_adv_diff_react(), oomph::RefineableAdvectionDiffusionReactionEquations< NREAGENT, DIM >::fill_in_generic_residual_contribution_adv_diff_react(), oomph::AxisymAdvectionDiffusionEquations::fill_in_generic_residual_contribution_axi_adv_diff(), oomph::RefineableAxisymAdvectionDiffusionEquations::fill_in_generic_residual_contribution_axi_adv_diff(), oomph::AxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_axi_nst(), oomph::RefineableAxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_axi_nst(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_axi_nst(), oomph::RefineableGeneralisedNewtonianAxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_axi_nst(), oomph::LinearisedAxisymPoroelasticBJS_FSIElement< FLUID_BULK_ELEMENT, POROELASTICITY_BULK_ELEMENT >::fill_in_generic_residual_contribution_axisym_poroelastic_fsi(), oomph::AxisymmetricPVDEquationsWithPressure::fill_in_generic_residual_contribution_axisym_pvd_with_pressure(), oomph::GeneralisedAdvectionDiffusionEquations< DIM >::fill_in_generic_residual_contribution_cons_adv_diff(), oomph::RefineableGeneralisedAdvectionDiffusionEquations< DIM >::fill_in_generic_residual_contribution_cons_adv_diff(), oomph::RefineableGeneralisedAxisymAdvectionDiffusionEquations::fill_in_generic_residual_contribution_cons_axisym_adv_diff(), oomph::NavierStokesImpedanceTractionElement< BULK_NAVIER_STOKES_ELEMENT, WOMERSLEY_ELEMENT, DIM >::fill_in_generic_residual_contribution_fluid_traction(), oomph::FourierDecomposedHelmholtzEquations::fill_in_generic_residual_contribution_fourier_decomposed_helmholtz(), oomph::FourierDecomposedHelmholtzDtNBoundaryElement< ELEMENT >::fill_in_generic_residual_contribution_fourier_decomposed_helmholtz_DtN_bc(), oomph::LinearisedFSIAxisymmetricNStNoSlipBCElementElement< FLUID_BULK_ELEMENT, SOLID_BULK_ELEMENT >::fill_in_generic_residual_contribution_fsi_no_slip_axisym(), oomph::HelmholtzEquations< DIM >::fill_in_generic_residual_contribution_helmholtz(), oomph::RefineableHelmholtzEquations< DIM >::fill_in_generic_residual_contribution_helmholtz(), oomph::PMLHelmholtzEquations< DIM >::fill_in_generic_residual_contribution_helmholtz(), oomph::RefineablePMLHelmholtzEquations< DIM >::fill_in_generic_residual_contribution_helmholtz(), oomph::FluidInterfaceElement::fill_in_generic_residual_contribution_interface(), oomph::LinearisedAxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_lin_axi_nst(), oomph::LinearWaveEquations< DIM >::fill_in_generic_residual_contribution_lin_wave(), oomph::RefineableLinearWaveEquations< DIM >::fill_in_generic_residual_contribution_lin_wave(), oomph::LinearisedAxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_linearised_axi_nst(), oomph::RefineableLinearisedAxisymmetricNavierStokesEquations::fill_in_generic_residual_contribution_linearised_axi_nst(), oomph::LinearisedNavierStokesEquations::fill_in_generic_residual_contribution_linearised_nst(), oomph::RefineableLinearisedNavierStokesEquations::fill_in_generic_residual_contribution_linearised_nst(), oomph::MultiPoissonEquations< DIM, NFIELDS >::fill_in_generic_residual_contribution_multi_poisson(), oomph::RefineableSpaceTimeNavierStokesEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::RefineableSpaceTimeNavierStokesMixedOrderEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::SpaceTimeNavierStokesEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::RefineableGeneralisedNewtonianNavierStokesEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::NavierStokesEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::RefineableNavierStokesEquations< DIM >::fill_in_generic_residual_contribution_nst(), oomph::PeriodicOrbitEquations::fill_in_generic_residual_contribution_orbit(), oomph::PMLFourierDecomposedHelmholtzEquations::fill_in_generic_residual_contribution_pml_fourier_decomposed_helmholtz(), oomph::PoissonEquations< DIM >::fill_in_generic_residual_contribution_poisson(), oomph::RefineablePoissonEquations< DIM >::fill_in_generic_residual_contribution_poisson(), oomph::RefineablePVDEquationsWithPressure< DIM >::fill_in_generic_residual_contribution_pvd_with_pressure(), oomph::PVDEquationsWithPressure< DIM >::fill_in_generic_residual_contribution_pvd_with_pressure(), oomph::RefineableSphericalAdvectionDiffusionEquations::fill_in_generic_residual_contribution_spherical_adv_diff(), oomph::SphericalAdvectionDiffusionEquations::fill_in_generic_residual_contribution_spherical_adv_diff(), oomph::RefineableSphericalNavierStokesEquations::fill_in_generic_residual_contribution_spherical_nst(), oomph::SphericalNavierStokesEquations::fill_in_generic_residual_contribution_spherical_nst(), oomph::RefineableSpaceTimeUnsteadyHeatEquations< SPATIAL_DIM >::fill_in_generic_residual_contribution_ust_heat(), oomph::SpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >::fill_in_generic_residual_contribution_ust_heat(), oomph::RefineableSpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >::fill_in_generic_residual_contribution_ust_heat(), oomph::RefineableUnsteadyHeatEquations< DIM >::fill_in_generic_residual_contribution_ust_heat(), oomph::UnsteadyHeatEquations< DIM >::fill_in_generic_residual_contribution_ust_heat(), oomph::SurfaceVolumeConstraintBoundingElement::fill_in_generic_residual_contribution_volume_constraint(), oomph::WomersleyEquations< DIM >::fill_in_generic_residual_contribution_womersley(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::fill_in_generic_residual_contribution_wrapped_nst(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >::fill_in_generic_residual_contribution_wrapped_poisson(), oomph::GeneralisedElement::fill_in_jacobian_from_external_by_fd(), oomph::ElementWithMovingNodes::fill_in_jacobian_from_geometric_data(), oomph::GeneralisedElement::fill_in_jacobian_from_internal_by_fd(), RefineableQAxisymAdvectionDiffusionBoussinesqElement::fill_in_off_diagonal_block_analytic(), QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_off_diagonal_block_analytic(), RefineableQAdvectionDiffusionElementWithExternalElement< DIM >::fill_in_off_diagonal_block_analytic(), QAdvectionDiffusionElementWithExternalElement< DIM >::fill_in_off_diagonal_block_analytic(), oomph::RefineableAdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >::fill_in_off_diagonal_block_analytic(), oomph::AdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >::fill_in_off_diagonal_block_analytic(), RefineableBuoyantQCrouzeixRaviartElement< DIM >::fill_in_off_diagonal_jacobian_blocks_analytic(), oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::fill_in_off_diagonal_jacobian_blocks_analytic(), oomph::RefineableBuoyantQSphericalCrouzeixRaviartElement::fill_in_off_diagonal_jacobian_blocks_analytic(), oomph::BuoyantQCrouzeixRaviartElement< DIM >::fill_in_off_diagonal_jacobian_blocks_analytic(), oomph::RefineableBuoyantQCrouzeixRaviartElement< DIM >::fill_in_off_diagonal_jacobian_blocks_analytic(), oomph::DoubleBuoyantQCrouzeixRaviartElement< DIM >::fill_in_off_diagonal_jacobian_blocks_by_fd(), oomph::RefineableDoubleBuoyantQCrouzeixRaviartElement< DIM >::fill_in_off_diagonal_jacobian_blocks_by_fd(), oomph::GeneralPurposeBlockPreconditioner< MATRIX >::fill_in_subsidiary_preconditioners(), fillMatrix(), fillMatrix2(), fillSpdMatrix(), oomph::LAPACK_QZ::find_eigenvalues(), oomph::BinaryTreeForest::find_neighbours(), oomph::OcTreeForest::find_neighbours(), oomph::QuadTreeForest::find_neighbours(), GlobalParameters::find_node_on_centerline(), Eigen::internal::SparseLUImpl< Scalar, StorageIndex >::fixupL(), float_pow_test_impl(), FluidTriangleMesh< ELEMENT >::FluidTriangleMesh(), oomph::EulerEquations< DIM >::flux(), oomph::ScalarAdvectionEquations< DIM >::flux(), for(), forward_jacobian(), forward_jacobian_cpp11(), FreeSurfaceRotationProblem< ELEMENT >::FreeSurfaceRotationProblem(), FSICollapsibleChannelProblem< ELEMENT >::FSICollapsibleChannelProblem(), oomph::FSIDrivenCavityMesh< ELEMENT >::FSIDrivenCavityMesh(), oomph::SpaceTimeNavierStokesEquations< DIM >::full_output(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::full_output(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::full_output(), oomph::NavierStokesEquations< DIM >::full_output(), oomph::PolarNavierStokesEquations::full_output(), oomph::SphericalNavierStokesEquations::full_output(), internal::Colamd::garbage_collection(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::gatherPacket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::gatherPacket(), oomph::GaussLegendre< 3, NPTS_1D >::GaussLegendre(), oomph::GaussLobattoLegendre< 3, NPTS_1D >::GaussLobattoLegendre(), Eigen::internal::gemm_unrolled_complex_row_iteration(), Eigen::internal::gemm_unrolled_row_iteration(), Eigen::internal::gemmKernel(), gemv_col(), gemv_complex_col(), gemv_complex_row(), gemv_row(), TurekProblem< FLUID_ELEMENT, SOLID_ELEMENT >::generic_actions_after(), oomph::GeneralCircle::geom_data_pt(), SinusoidalWall::geom_data_pt(), SpikedLine::geom_data_pt(), oomph::SolidFiniteElement::geom_data_pt(), oomph::StraightLine::geom_data_pt(), oomph::Ellipse::geom_data_pt(), oomph::Circle::geom_data_pt(), oomph::MeshAsGeomObject::geom_data_pt(), oomph::PseudoBucklingRing::geom_data_pt(), oomph::RefineableSolidElement::geom_data_pt(), oomph::GeompackQuadScaffoldMesh::GeompackQuadScaffoldMesh(), oomph::CRDoubleMatrixHelpers::gershgorin_eigenvalue_estimate(), oomph::MapMatrixMixed< KEY_TYPE_ROW, KEY_TYPE_COL, VALUE_TYPE >::get(), DPMBase::get2DParametersFromRunNumber(), DPMBase::get3DParametersFromRunNumber(), oomph::EigenProblemHandler::get_all_vectors_and_matrices(), oomph::SumOfMatrices::get_as_indices(), oomph::LinearisedAxisymmetricNavierStokesEquations::get_base_flow_duds(), LinearisedAxisymmetricQCrouzeixRaviartMultiDomainElement::get_base_flow_duds(), oomph::LinearisedAxisymmetricNavierStokesEquations::get_base_flow_dudx(), LinearisedAxisymmetricQTaylorHoodMultiDomainElement::get_base_flow_dudx(), LinearisedAxisymmetricQCrouzeixRaviartMultiDomainElement::get_base_flow_dudx(), RefineableLinearisedAxisymmetricQTaylorHoodMultiDomainElement::get_base_flow_dudx(), RefineableLinearisedAxisymmetricQCrouzeixRaviartMultiDomainElement::get_base_flow_dudx(), oomph::LinearisedNavierStokesEquations::get_base_flow_dudx(), LinearisedQTaylorHoodMultiDomainElement::get_base_flow_dudx(), LinearisedQCrouzeixRaviartMultiDomainElement::get_base_flow_dudx(), RefineableLinearisedQTaylorHoodMultiDomainElement::get_base_flow_dudx(), RefineableLinearisedQCrouzeixRaviartMultiDomainElement::get_base_flow_dudx(), NonRefineableBinArray::get_bin(), oomph::BlockPreconditioner< MATRIX >::get_block(), oomph::BlockPreconditioner< MATRIX >::get_block_other_matrix(), oomph::BlockPreconditioner< MATRIX >::get_blocks(), oomph::AxisymmetricNavierStokesEquations::get_body_force_gradient_axi_nst(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::get_body_force_gradient_axi_nst(), oomph::LinearisedAxisymmetricNavierStokesEquations::get_body_force_gradient_base_flow(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::get_body_force_gradient_nst(), oomph::NavierStokesEquations< DIM >::get_body_force_gradient_nst(), oomph::SpaceTimeNavierStokesEquations< DIM >::get_body_force_gradient_nst(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::get_body_force_gradient_nst(), oomph::FiniteElement::get_centre_of_gravity_and_max_radius_in_terms_of_zeta(), oomph::PVDEquationsBase< DIM >::get_deformed_covariant_basis_vectors(), oomph::PoissonEquations< DIM >::get_dflux_dnodal_u(), oomph::GeneralisedAdvectionDiffusionEquations< DIM >::get_diff_cons_adv_diff(), oomph::get_diff_cons_axisym_adv_diff(), oomph::ElementWithMovingNodes::get_dnodal_coordinates_dgeom_dofs(), oomph::MyTaylorHoodElement< DIM >::get_dof_numbers_for_unknowns(), oomph::MyLinearElasticityElement< DIM >::get_dof_numbers_for_unknowns(), oomph::ImposeImpenetrabilityElement< ELEMENT >::get_dof_numbers_for_unknowns(), oomph::ClampedHermiteShellBoundaryConditionElement::get_dof_numbers_for_unknowns(), oomph::PVDEquationsWithPressure< DIM >::get_dof_numbers_for_unknowns(), oomph::ImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::get_dof_numbers_for_unknowns(), oomph::FSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::get_dof_numbers_for_unknowns(), oomph::BlockPrecQTaylorHoodSpaceTimeElement::get_dof_numbers_for_unknowns(), oomph::BlockPrecQTaylorHoodMixedOrderSpaceTimeElement::get_dof_numbers_for_unknowns(), oomph::Problem::get_dofs(), RefineableModalPoissonEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::AxisymmetricNavierStokesEquations::get_dresidual_dnodal_coordinates(), oomph::RefineableAxisymmetricNavierStokesEquations::get_dresidual_dnodal_coordinates(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::get_dresidual_dnodal_coordinates(), oomph::RefineableGeneralisedNewtonianAxisymmetricNavierStokesEquations::get_dresidual_dnodal_coordinates(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::RefineableGeneralisedNewtonianNavierStokesEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::FiniteElement::get_dresidual_dnodal_coordinates(), oomph::NavierStokesEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::RefineableNavierStokesEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::RefineablePoissonEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::SpaceTimeNavierStokesEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::RefineableSpaceTimeNavierStokesEquations< DIM >::get_dresidual_dnodal_coordinates(), oomph::FoldHandler::get_dresiduals_dparameter(), oomph::PitchForkHandler::get_dresiduals_dparameter(), oomph::HopfHandler::get_dresiduals_dparameter(), oomph::Z2ErrorEstimator::get_element_errors(), oomph::KirchhoffLoveShellEquations::get_energy(), oomph::PVDEquationsBase< DIM >::get_energy(), oomph::KirchhoffLoveBeamEquations::get_energy(), oomph::DenseMatrix< T >::get_entry(), oomph::CRMatrix< T >::get_entry(), oomph::CCMatrix< T >::get_entry(), oomph::PolarStreamfunctionEquations::get_flux(), oomph::AdvectionDiffusionEquations< DIM >::get_flux(), oomph::GeneralisedAdvectionDiffusionEquations< DIM >::get_flux(), oomph::AdvectionDiffusionReactionEquations< NREAGENT, DIM >::get_flux(), oomph::AxisymAdvectionDiffusionEquations::get_flux(), oomph::get_flux(), oomph::LinearWaveEquations< DIM >::get_flux(), oomph::PoissonEquations< DIM >::get_flux(), oomph::SpaceTimeUnsteadyHeatEquations< SPATIAL_DIM >::get_flux(), oomph::SpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >::get_flux(), oomph::SphericalAdvectionDiffusionEquations::get_flux(), oomph::SteadyAxisymAdvectionDiffusionEquations::get_flux(), oomph::UnsteadyHeatEquations< DIM >::get_flux(), oomph::WomersleyEquations< DIM >::get_flux(), oomph::YoungLaplaceEquations::get_flux(), ModalPoissonEquations< DIM >::get_flux(), oomph::FourierDecomposedHelmholtzEquations::get_flux(), oomph::HelmholtzEquations< DIM >::get_flux(), oomph::PMLFourierDecomposedHelmholtzEquations::get_flux(), oomph::PMLHelmholtzEquations< DIM >::get_flux(), oomph::DisplacementBasedFoepplvonKarmanEquations::get_gradient_of_deflection(), oomph::FoepplvonKarmanEquations::get_gradient_of_deflection(), oomph::DisplacementBasedFoepplvonKarmanEquations::get_gradient_of_field(), oomph::SurfaceContactElementBase< ELEMENT >::get_interpolated_lagrange_p(), oomph::SurfaceMeltElement< ELEMENT >::get_interpolated_lagrange_p(), oomph::FpPreconditionerAssemblyHandler::get_jacobian(), TwoNodePoissonElement::get_jacobian(), oomph::Hijacked< ELEMENT >::get_jacobian(), oomph::ImposeFluxForWomersleyElement< DIM >::get_jacobian(), oomph::PolarCrouzeixRaviartElement::get_load_data(), oomph::LineVisualiser::get_local_plot_points_coordinates(), oomph::CRDoubleMatrix::get_matrix_transpose(), oomph::SCoupledElement< ELEMENT >::get_momentum_and_energy(), oomph::VolumeCoupledElement< ELEMENT >::get_momentum_and_energy(), BinArray::get_neighbouring_bins_helper(), NodeReordering::get_node_reordering(), oomph::Mesh::get_node_reordering(), oomph::KirchhoffLoveShellEquations::get_normal(), oomph::KirchhoffLoveBeamEquations::get_normal(), oomph::LineVisualiser::get_output_data(), oomph::PVDEquationsBase< DIM >::get_principal_stress(), oomph::VorticitySmootherElement< ELEMENT >::get_raw_velocity_deriv(), oomph::VorticitySmootherElement< ELEMENT >::get_raw_vorticity_deriv(), oomph::VorticitySmootherElement< ELEMENT >::get_raw_vorticity_second_deriv(), oomph::Z2ErrorEstimator::get_recovered_flux_in_patch(), GlobalFct::get_residuals(), oomph::FoldHandler::get_residuals(), oomph::PitchForkHandler::get_residuals(), oomph::HopfHandler::get_residuals(), oomph::TElement< 2, NNODE_1D >::get_s_plot(), oomph::TElement< 3, NNODE_1D >::get_s_plot(), oomph::SpaceTimeNavierStokesEquations< DIM >::get_source_gradient_nst(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::get_source_gradient_nst(), oomph::YoungLaplaceEquations::get_spine(), oomph::YoungLaplaceEquations::get_spine_base(), oomph::AxisymmetricLinearElasticityEquations::get_strain(), oomph::LinearElasticityEquationsBase< DIM >::get_strain(), oomph::PoroelasticityEquations< DIM >::get_strain(), oomph::PVDEquationsBase< DIM >::get_strain(), oomph::TimeHarmonicFourierDecomposedLinearElasticityEquations::get_strain(), oomph::PMLTimeHarmonicLinearElasticityEquationsBase< DIM >::get_strain(), oomph::TimeHarmonicLinearElasticityEquationsBase< DIM >::get_strain(), oomph::KirchhoffLoveShellEquations::get_strain_and_bend(), oomph::PVDEquations< DIM >::get_stress(), oomph::PVDEquationsWithPressure< DIM >::get_stress(), oomph::LinearElasticityEquations< DIM >::get_stress(), oomph::PoroelasticityEquations< DIM >::get_stress(), oomph::PMLTimeHarmonicLinearElasticityEquations< DIM >::get_stress(), oomph::TimeHarmonicLinearElasticityEquations< DIM >::get_stress(), oomph::DisplacementBasedFoepplvonKarmanEquations::get_stress_and_strain_for_output(), Eigen::MetisOrdering< StorageIndex >::get_symmetrized_graph(), oomph::GeneralisedAdvectionDiffusionEquations< DIM >::get_total_flux(), oomph::get_total_flux(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::get_traction(), oomph::NavierStokesEquations< DIM >::get_traction(), oomph::PolarNavierStokesEquations::get_traction(), oomph::SpaceTimeNavierStokesEquations< DIM >::get_traction(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::get_traction(), oomph::SphericalNavierStokesEquations::get_traction(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::get_vorticity(), oomph::NavierStokesEquations< DIM >::get_vorticity(), oomph::SpaceTimeNavierStokesEquations< DIM >::get_vorticity(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::get_vorticity(), oomph::SphericalNavierStokesEquations::get_vorticity(), oomph::RefineableLinearisedAxisymmetricNavierStokesEquations::get_Z2_flux(), get_Z2_flux(), oomph::TAxisymmetricLinearElasticityElement< NNODE_1D >::get_Z2_flux(), oomph::RefineableAxisymmetricNavierStokesEquations::get_Z2_flux(), oomph::AxisymmetricTCrouzeixRaviartElement::get_Z2_flux(), oomph::AxisymmetricTTaylorHoodElement::get_Z2_flux(), oomph::RefineableGeneralisedNewtonianAxisymmetricNavierStokesEquations::get_Z2_flux(), oomph::GeneralisedNewtonianAxisymmetricTCrouzeixRaviartElement::get_Z2_flux(), oomph::GeneralisedNewtonianAxisymmetricTTaylorHoodElement::get_Z2_flux(), oomph::RefineableGeneralisedNewtonianNavierStokesEquations< DIM >::get_Z2_flux(), oomph::GeneralisedNewtonianTCrouzeixRaviartElement< DIM >::get_Z2_flux(), oomph::GeneralisedNewtonianTTaylorHoodElement< DIM >::get_Z2_flux(), oomph::RefineableLinearElasticityEquations< DIM >::get_Z2_flux(), oomph::TLinearElasticityElement< DIM, NNODE_1D >::get_Z2_flux(), oomph::RefineableLinearisedNavierStokesEquations::get_Z2_flux(), oomph::RefineableNavierStokesEquations< DIM >::get_Z2_flux(), oomph::TCrouzeixRaviartElement< DIM >::get_Z2_flux(), oomph::TTaylorHoodElement< DIM >::get_Z2_flux(), oomph::TPMLTimeHarmonicLinearElasticityElement< DIM, NNODE_1D >::get_Z2_flux(), oomph::RefineablePolarNavierStokesEquations::get_Z2_flux(), oomph::RefineablePVDEquations< DIM >::get_Z2_flux(), oomph::RefineablePVDEquationsWithPressure< DIM >::get_Z2_flux(), oomph::TPVDElement< DIM, NNODE_1D >::get_Z2_flux(), oomph::TPVDBubbleEnrichedElement< DIM, NNODE_1D >::get_Z2_flux(), oomph::TPVDElementWithContinuousPressure< DIM >::get_Z2_flux(), oomph::RefineableSpaceTimeNavierStokesEquations< DIM >::get_Z2_flux(), oomph::RefineableSpaceTimeNavierStokesMixedOrderEquations< DIM >::get_Z2_flux(), oomph::RefineableSpaceTimeUnsteadyHeatEquations< SPATIAL_DIM >::get_Z2_flux(), oomph::RefineableSpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >::get_Z2_flux(), oomph::RefineableSphericalNavierStokesEquations::get_Z2_flux(), oomph::TTimeHarmonicFourierDecomposedLinearElasticityElement< NNODE_1D >::get_Z2_flux(), oomph::RefineableTimeHarmonicLinearElasticityEquations< DIM >::get_Z2_flux(), oomph::TTimeHarmonicLinearElasticityElement< DIM, NNODE_1D >::get_Z2_flux(), Eigen::internal::getAdjointVal(), SmallMatrix< numberOfRows, numberOfColumns >::getColumn(), LevelSetWall::getDistanceAndNormalLabCoordinates(), SolidProblem< ELEMENT_TYPE >::getDomainSize(), SuperQuadricParticle::getJacobianOfContactDetectionObjective(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::getLinearMapper(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::getLinearMapper(), Eigen::internal::TensorContractionSubMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::getLinearMapper(), Eigen::internal::TensorContractionInputMapper< Scalar_, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::getLinearMapper(), InteractionHandler::getLiquidBridgeVolume(), LiquidFilm< Particle >::getLiquidBridgeVolume(), ParticleHandler::getLiquidFilmVolume(), Domain::getLocalIndex(), Eigen::internal::GetMarketLine(), SolidProblem< ELEMENT_TYPE >::getMassMomentumEnergy(), InteractionHandler::getNumberOfLiquidBridges(), DomainHandler::getParticleDomainGlobalIndex(), VolumeCoupling::getProjectionAndProjected(), SmallMatrix< numberOfRows, numberOfColumns >::getRow(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::getSubMapper(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::getSubMapper(), Eigen::internal::const_blas_data_mapper< Scalar, Index, StorageOrder >::getSubMapper(), Eigen::internal::TensorContractionSubMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::getSubMapper(), Eigen::internal::TensorContractionInputMapper< Scalar_, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::getSubMapper(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::getVectorMapper(), Eigen::internal::TensorContractionInputMapper< Scalar_, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::getVectorMapper(), WearableNurbsWall::getVolumeUnderSurface(), WearableNurbsWall::getVolumeUnderSurfaceX(), oomph::Orthpoly::gl_nodes(), oomph::Orthpoly::gll_nodes(), oomph::CRDoubleMatrix::global_matrix(), SurfactantProblem< ELEMENT, INTERFACE_ELEMENT >::global_temporal_error_norm(), GluedSolidMesh::glue(), GluedSolidMesh::GluedSolidMesh(), Eigen::PastixLU< MatrixType_, IsStrSym >::grabMatrix(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::grad_u_bar(), oomph::HalfRectangleWithHoleDomain::HalfRectangleWithHoleDomain(), oomph::HalfRectangleWithHoleMesh< ELEMENT >::HalfRectangleWithHoleMesh(), oomph::FiniteElement::has_hanging_nodes(), Eigen::internal::SparseLUImpl< Scalar, StorageIndex >::heap_relax_snode(), Eigen::RealQZ< MatrixType_ >::hessenbergTriangular(), homogeneous(), HomogenisationProblem< ELEMENT >::HomogenisationProblem(), RefineableQAxisymAdvectionDiffusionBoussinesqElement::identify_all_field_data_for_external_interaction(), oomph::RefineableAdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >::identify_all_field_data_for_external_interaction(), ElasticTriangleMesh< ELEMENT >::identify_boundaries(), SegregatedFSIDrivenCavityProblem< ELEMENT >::identify_fluid_and_solid_dofs(), oomph::PseudoSolidNodeUpdateElement< BASIC, SOLID >::identify_geometric_data(), oomph::RefineablePseudoSolidNodeUpdateElement< BASIC, SOLID >::identify_geometric_data(), oomph::RefineableSolidElement::identify_geometric_data(), oomph::RefineableGeneralisedNewtonianQTaylorHoodElement< DIM >::identify_load_data(), oomph::RefineableGeneralisedNewtonianQCrouzeixRaviartElement< DIM >::identify_load_data(), oomph::RefineableQTaylorHoodElement< DIM >::identify_load_data(), oomph::RefineableQCrouzeixRaviartElement< DIM >::identify_load_data(), oomph::RefineableQTaylorHoodSpaceTimeElement< DIM >::identify_load_data(), oomph::RefineableQTaylorHoodMixedOrderSpaceTimeElement< DIM >::identify_load_data(), oomph::AxisymmetricTCrouzeixRaviartElement::identify_pressure_data(), oomph::GeneralisedNewtonianAxisymmetricTCrouzeixRaviartElement::identify_pressure_data(), oomph::GeneralisedNewtonianQCrouzeixRaviartElement< DIM >::identify_pressure_data(), oomph::GeneralisedNewtonianTCrouzeixRaviartElement< DIM >::identify_pressure_data(), oomph::QCrouzeixRaviartElement< DIM >::identify_pressure_data(), oomph::TCrouzeixRaviartElement< DIM >::identify_pressure_data(), oomph::QSphericalCrouzeixRaviartElement::identify_pressure_data(), oomph::SimpleFSIPreconditioner< MATRIX >::identify_required_blocks(), Eigen::internal::idrstabl(), oomph::ImmersedRigidBodyTriangleMeshPolygon::ImmersedRigidBodyTriangleMeshPolygon(), DPMBase::importParticlesAs(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >::impose_dirichlet_bc_on_node(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::impose_dirichlet_bc_on_pressure_dof(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::impose_velocity_dirichlet_bc_on_node(), oomph::BlockPreconditioner< MATRIX >::index_in_block(), oomph::DenseMatrix< T >::indexed_output(), oomph::CRDoubleMatrix::inf_norm(), inflowFromPeriodic::inflowFromPeriodic(), Eigen::internal::coeff_visitor< Derived >::init(), TrackedVisitor< Derived, Vectorizable >::init(), Eigen::TensorIOFormatBase< Derived_ >::init_spacer(), oomph::BrethertonSpineMesh< ELEMENT, INTERFACE_ELEMENT >::initial_element_reorder(), oomph::BrethertonSpineMesh< ELEMENT, SpineLineFluidInterfaceElement< ELEMENT > >::initial_element_reorder(), HGridOptimiser::initialisePolyFunc(), Eigen::MatrixPower< MatrixType >::initialize(), Membrane::initializeEdgeBendingQuantities(), initializerListArrayConstruction(), initializerListMatrixConstruction(), Eigen::internal::minmax_coeff_visitor< Derived, is_min, NaNPropagation, isInt >::initpacket(), Eigen::internal::minmax_coeff_visitor< Derived, is_min, NaNPropagation, false >::initpacket(), TrackedVisitor< Derived, Vectorizable >::initpacket(), initSparse(), initSPD(), oomph::RefineablePolarTaylorHoodElement::insert_load_data(), oomph::RefineablePolarCrouzeixRaviartElement::insert_load_data(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::insertByOuterInner(), insertCoefficient(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::insertCompressedAtByOuterInner(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::insertEmptyOuterVectors(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::insertUncompressedAtByOuterInner(), oomph::SurfactantTransportInterfaceElement::integrate_c(), oomph::ElementElementConstraintElement::intern_data_eqn(), oomph::BlockPreconditioner< MATRIX >::internal_index_in_block(), oomph::GeneralisedElement::internal_local_eqn(), oomph::TetMeshFacetedClosedSurface::internal_point_for_tetgen(), oomph::TetMeshFacetedClosedSurface::internal_point_identifies_hole_for_tetgen(), oomph::TetMeshFacetedClosedSurface::internal_point_identifies_region_for_tetgen(), PSDContinuous::interpolateCSD(), oomph::AxisymmetricNavierStokesEquations::interpolated_duds_axi_nst(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::interpolated_duds_axi_nst(), oomph::PolarStreamfunctionEquations::interpolated_dudx(), oomph::AxisymmetricNavierStokesEquations::interpolated_dudx_axi_nst(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::interpolated_dudx_axi_nst(), oomph::NavierStokesEquations< DIM >::interpolated_dudx_nst(), oomph::PolarNavierStokesEquations::interpolated_dudx_pnst(), oomph::SphericalNavierStokesEquations::interpolated_dudx_spherical_nst(), oomph::SolidFiniteElement::interpolated_dxids(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::interpolated_p_nst(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::interpolated_u_nst(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::interpolated_u_nst_fe_only(), inverse_general_4x4(), Eigen::MatrixBase< Derived >::isDiagonal(), Eigen::MatrixBase< Derived >::isIdentity(), Eigen::MatrixBase< Derived >::isLowerTriangular(), Eigen::MatrixBase< Derived >::isUnitary(), Eigen::MatrixBase< Derived >::isUpperTriangular(), Eigen::DenseBase< Derived >::isZero(), oomph::FiniteElement::J_eulerian(), oomph::FaceElement::J_eulerian(), oomph::FiniteElement::J_eulerian_at_knot(), oomph::FaceElement::J_eulerian_at_knot(), oomph::ProjectableAxisymmetricPoroelasticityElement< AXISYMMETRIC_POROELASTICITY_ELEMENT >::jacobian_and_shape_of_field(), oomph::ProjectableDarcyElement< DARCY_ELEMENT >::jacobian_and_shape_of_field(), Eigen::internal::trsmKernelL< Scalar, Index, Mode, Conjugate, TriStorageOrder, OtherInnerStride, Specialized >::kernel(), Eigen::internal::trsmKernelR< Scalar, Index, Mode, Conjugate, TriStorageOrder, OtherInnerStride, Specialized >::kernel(), Eigen::internal::KLoop(), oomph::PiecewiseGauss< DIM, NPTS_1D >::knot(), oomph::Gauss< 1, 2 >::knot(), oomph::Gauss< 1, 3 >::knot(), oomph::Gauss< 1, 4 >::knot(), oomph::Gauss< 2, 2 >::knot(), oomph::Gauss< 2, 3 >::knot(), oomph::Gauss< 2, 4 >::knot(), oomph::Gauss< 3, 2 >::knot(), oomph::Gauss< 3, 3 >::knot(), oomph::Gauss< 3, 4 >::knot(), oomph::Gauss_Rescaled< DIM, NPTS_1D >::knot(), oomph::TGauss< 1, 2 >::knot(), oomph::TGauss< 1, 3 >::knot(), oomph::TGauss< 1, 4 >::knot(), oomph::TGauss< 1, 5 >::knot(), oomph::TGauss< 2, 2 >::knot(), oomph::TGauss< 2, 3 >::knot(), oomph::TGauss< 2, 4 >::knot(), oomph::TGauss< 2, 13 >::knot(), oomph::TGauss< 2, 9 >::knot(), oomph::TGauss< 2, 16 >::knot(), oomph::TGauss< 2, 5 >::knot(), oomph::TGauss< 3, 2 >::knot(), oomph::TGauss< 3, 3 >::knot(), oomph::TGauss< 3, 5 >::knot(), oomph::GaussLobattoLegendre< 1, NPTS_1D >::knot(), oomph::GaussLobattoLegendre< 2, NPTS_1D >::knot(), oomph::GaussLobattoLegendre< 3, NPTS_1D >::knot(), oomph::GaussLegendre< 1, NPTS_1D >::knot(), oomph::GaussLegendre< 2, NPTS_1D >::knot(), oomph::GaussLegendre< 3, NPTS_1D >::knot(), Eigen::KnotAveraging(), Eigen::KnotAveragingWithDerivatives(), latest_fixed_point_iteration_guess_for_strain_rate(), oomph::HelperForSortingVectorOfPairsOfVertexPtAndDouble::less_than_based_on_double(), TwoDDGProblem< ELEMENT >::limit(), oomph::LinearisedAxisymPoroelasticBJS_FSIElement< FLUID_BULK_ELEMENT, POROELASTICITY_BULK_ELEMENT >::LinearisedAxisymPoroelasticBJS_FSIElement(), Eigen::internal::llt_rank_update_lower(), Eigen::internal::lmpar(), Eigen::internal::lmpar2(), Eigen::internal::lmqrsolv(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::load(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::load(), Eigen::internal::BaseTensorContractionMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::load(), Eigen::internal::BaseTensorContractionMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, 1, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::load(), oomph::KirchhoffLoveShellEquations::load_rate_of_work(), LoadClumps(), loadColData(), LoadIProfiles(), loadLhsPacket(), Eigen::loadMarket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::loadPacket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::loadPacket(), Eigen::internal::BaseTensorContractionMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::loadPacket(), Eigen::internal::BaseTensorContractionMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, 1, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::loadPacket(), Eigen::internal::TensorContractionSubMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::loadPacket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::loadPacketPartial(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::loadPacketPartial(), Eigen::internal::TensorContractionSubMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::loadPacketPartial(), SolidProblem< ELEMENT_TYPE >::loadSolidMesh(), oomph::QHermiteElement< DIM >::local_coordinate_of_node(), oomph::QElement< 1, NNODE_1D >::local_coordinate_of_node(), oomph::QElement< 2, NNODE_1D >::local_coordinate_of_node(), oomph::QElement< 3, NNODE_1D >::local_coordinate_of_node(), oomph::TElementShape< 1, 2 >::local_coordinate_of_node(), oomph::TElementShape< 1, 3 >::local_coordinate_of_node(), oomph::TElementShape< 1, 4 >::local_coordinate_of_node(), oomph::TElementShape< 2, 2 >::local_coordinate_of_node(), oomph::TElementShape< 2, 3 >::local_coordinate_of_node(), oomph::TElementShape< 2, 4 >::local_coordinate_of_node(), oomph::TBubbleEnrichedElementShape< 2, 3 >::local_coordinate_of_node(), oomph::TElement< 1, NNODE_1D >::local_coordinate_of_node(), oomph::TElement< 2, NNODE_1D >::local_coordinate_of_node(), oomph::TElementShape< 3, 2 >::local_coordinate_of_node(), oomph::TElementShape< 3, 3 >::local_coordinate_of_node(), oomph::TBubbleEnrichedElementShape< 3, 3 >::local_coordinate_of_node(), oomph::TElement< 3, NNODE_1D >::local_coordinate_of_node(), oomph::TBubbleEnrichedElement< DIM, 3 >::local_coordinate_of_node(), oomph::ProjectableLinearHeatAndElasticityElement< LINEAR_HEAT_AND_ELAST_ELEMENT >::local_equation(), oomph::ProjectableAxisymmetricTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::local_equation(), oomph::ProjectableAxisymmetricCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::local_equation(), oomph::ProjectableAxisymmetricPoroelasticityElement< AXISYMMETRIC_POROELASTICITY_ELEMENT >::local_equation(), oomph::ProjectableDarcyElement< DARCY_ELEMENT >::local_equation(), oomph::GeneralisedNewtonianProjectableAxisymmetricTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::local_equation(), oomph::GeneralisedNewtonianProjectableAxisymmetricCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::local_equation(), oomph::ProjectableGeneralisedNewtonianTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::local_equation(), oomph::ProjectableGeneralisedNewtonianCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::local_equation(), oomph::ProjectableTaylorHoodElement< TAYLOR_HOOD_ELEMENT >::local_equation(), oomph::ProjectableCrouzeixRaviartElement< CROUZEIX_RAVIART_ELEMENT >::local_equation(), oomph::ProjectablePVDElementWithContinuousPressure< PVD_ELEMENT >::local_equation(), oomph::ProjectableTaylorHoodSpaceTimeElement< TAYLOR_HOOD_ELEMENT >::local_equation(), oomph::ProjectableTaylorHoodMixedOrderSpaceTimeElement< TAYLOR_HOOD_ELEMENT >::local_equation(), oomph::FiniteElement::local_fraction_of_node(), oomph::QHermiteElement< DIM >::local_fraction_of_node(), oomph::QElement< 1, NNODE_1D >::local_fraction_of_node(), oomph::QElement< 2, NNODE_1D >::local_fraction_of_node(), oomph::QElement< 3, NNODE_1D >::local_fraction_of_node(), oomph::FiniteElement::local_to_eulerian_mapping_diagonal(), oomph::RefineableElement::local_to_eulerian_mapping_diagonal(), oomph::SolidFiniteElement::local_to_lagrangian_mapping_diagonal(), oomph::RefineableSolidElement::local_to_lagrangian_mapping_diagonal(), oomph::FiniteElement::locate_zeta(), RefineableBin::locate_zeta(), Eigen::SparseLU< MatrixType_, OrderingType_ >::logAbsDeterminant(), oomph::DenseComplexMatrix::lubksub(), oomph::DenseComplexMatrix::ludecompose(), oomph::ChannelWithLeafletDomain::macro_bound_I_E(), oomph::ChannelWithLeafletDomain::macro_bound_I_N(), oomph::ChannelWithLeafletDomain::macro_bound_I_S(), oomph::ChannelWithLeafletDomain::macro_bound_I_W(), oomph::ChannelWithLeafletDomain::macro_bound_II_E(), oomph::ChannelWithLeafletDomain::macro_bound_II_N(), oomph::ChannelWithLeafletDomain::macro_bound_II_S(), oomph::ChannelWithLeafletDomain::macro_bound_II_W(), oomph::ChannelWithLeafletDomain::macro_bound_III_E(), oomph::ChannelWithLeafletDomain::macro_bound_III_N(), oomph::ChannelWithLeafletDomain::macro_bound_III_S(), oomph::ChannelWithLeafletDomain::macro_bound_III_W(), oomph::ChannelWithLeafletDomain::macro_bound_IV_E(), oomph::ChannelWithLeafletDomain::macro_bound_IV_N(), oomph::ChannelWithLeafletDomain::macro_bound_IV_S(), oomph::ChannelWithLeafletDomain::macro_bound_IV_W(), oomph::FullCircleDomain::macro_element_boundary(), oomph::TubeDomain::macro_element_boundary(), oomph::ChannelWithLeafletDomain::macro_element_boundary(), main(), Eigen::internal::make_block_householder_triangular_factor(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::makeCompressed(), map_class_matrix(), Map_MatrixXd_get_coeff(), Map_MatrixXd_set_coeff(), Eigen::internal::IndexMapper< Index, InputDims, NumKernelDims, Layout >::mapGpuInputKernelToTensorInputOffset(), Eigen::internal::IndexMapper< Index, InputDims, NumKernelDims, Layout >::mapGpuOutputKernelToTensorOutputOffset(), c_interface_base< real >::matrix_from_stl(), Eigen::internal::matrix_function_find_cluster(), Eigen::internal::matrix_function_partition_eigenvalues(), Eigen::internal::matrix_function_permute_schur(), Eigen::internal::matrix_function_solve_triangular_sylvester(), oomph::CCDoubleMatrix::matrix_reduction(), oomph::CRDoubleMatrix::matrix_reduction(), oomph::DenseDoubleMatrix::matrix_reduction(), Eigen::internal::matrix_sqrt_quasi_triangular_1x1_off_diagonal_block(), Eigen::internal::matrix_sqrt_quasi_triangular_1x2_off_diagonal_block(), Eigen::internal::matrix_sqrt_quasi_triangular_2x1_off_diagonal_block(), Eigen::internal::matrix_sqrt_quasi_triangular_2x2_off_diagonal_block(), Eigen::internal::matrix_sqrt_quasi_triangular_off_diagonal(), Eigen::matrix_sqrt_triangular(), c_interface_base< real >::matrix_to_stl(), matrixRedux(), matrixVisitor(), MatrixXd_get_coeff(), MatrixXd_set_coeff(), oomph::HelmholtzMGPreconditioner< DIM >::maximum_edge_width(), MeltContactProblem< ELEMENT >::MeltContactProblem(), oomph::MeshHelper::merge_spine_meshes(), Mesh1D< ELEMENT >::Mesh1D(), Eigen::LevenbergMarquardt< FunctorType_ >::minimizeInit(), Eigen::LevenbergMarquardt< FunctorType_ >::minimizeOneStep(), Eigen::LevenbergMarquardt< FunctorType_ >::minimizeOptimumStorageInit(), Eigen::LevenbergMarquardt< FunctorType_ >::minimizeOptimumStorageOneStep(), Eigen::internal::minimum_degree_ordering(), DenseLM< Scalar >::model(), sparseGaussianTest< Scalar >::model(), oomph::MGSolver< DIM >::modify_restriction_matrices(), oomph::OcTree::mult_mat_mat(), oomph::CRDoubleMatrix::multiply(), oomph::DenseDoubleMatrix::multiply(), oomph::CCDoubleMatrix::multiply(), oomph::DenseComplexMatrix::multiply(), oomph::CRComplexMatrix::multiply(), oomph::CCComplexMatrix::multiply(), oomph::CRDoubleMatrix::multiply_transpose(), oomph::DenseDoubleMatrix::multiply_transpose(), oomph::CCDoubleMatrix::multiply_transpose(), oomph::DenseComplexMatrix::multiply_transpose(), oomph::CRComplexMatrix::multiply_transpose(), oomph::CCComplexMatrix::multiply_transpose(), Eigen::internal::multVecLoop(), multVSXVecLoop(), Anasazi::MultiVecTraits< double, oomph::DoubleMultiVector >::MvTimesMatAddMv(), oomph::StreamfunctionProblem::my_output(), oomph::MyProblem::my_set_initial_condition(), oomph::ODEProblem::my_set_initial_condition(), MySolidTriangleMesh< ELEMENT >::MySolidTriangleMesh(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::NavierStokesElementWithSingularity(), next_subset(), oomph::Node::Node(), oomph::PRefineableQElement< 2, INITIAL_NNODE_1D >::node_created_by_neighbour(), oomph::PRefineableQElement< 3, INITIAL_NNODE_1D >::node_created_by_neighbour(), oomph::RefineableQElement< 3 >::node_created_by_neighbour(), oomph::RefineableQElement< 2 >::node_created_by_neighbour(), oomph::PRefineableQElement< 2, INITIAL_NNODE_1D >::node_created_by_son_of_neighbour(), oomph::PRefineableQElement< 3, INITIAL_NNODE_1D >::node_created_by_son_of_neighbour(), oomph::ElementElementConstraintElement::node_eqn(), NodeReordering::node_global_position_comparison(), oomph::NodeOrdering::node_global_position_comparison(), oomph::Mesh::node_update(), Eigen::BlockImpl< XprType, BlockRows, BlockCols, true, Sparse >::nonZeros(), oomph::TElement< 3, NNODE_1D >::nplot_points_paraview(), oomph::TriangleMeshClosedCurve::nsegments(), oomph::TriangleMeshOpenCurve::nsegments(), oomph::DGEulerFaceElement< ELEMENT >::numerical_flux(), oomph::TetMeshFacetedSurface::nvertex_on_facet(), oomph::TriangleMeshClosedCurve::nvertices(), oomph::PRefineableQElement< 3, INITIAL_NNODE_1D >::oc_hang_helper(), oomph::RankFourTensor< T >::offset(), oomph::DShape::offset(), oomph::RankFiveTensor< T >::offset(), oomph::TetMeshFacetedSurface::one_based_facet_boundary_id(), oomph::TetMeshFacetedSurface::one_based_vertex_boundary_id(), oomph::OneDimensionalLegendreDShape< NNODE_1D >::OneDimensionalLegendreDShape(), oomph::OneDLegendreDShapeParam::OneDLegendreDShapeParam(), Eigen::internal::dhs_pack< bfloat16, DataMapper, Packet8bf, StorageOrder, PanelMode, true >::operator()(), Eigen::internal::dhs_pack< bfloat16, DataMapper, Packet8bf, StorageOrder, PanelMode, false >::operator()(), Eigen::EigenConvolutionKernel< Evaluator, CoeffReturnType, KernelType, Index, InputDims, Kernel_accessor, Buffer_accessor, convolution_type::CONV2D >::operator()(), Eigen::EigenConvolutionKernel< Evaluator, CoeffReturnType, KernelType, Index, InputDims, Kernel_accessor, Buffer_accessor, convolution_type::CONV3D >::operator()(), TestFunc1< Scalar_, NX, NY >::operator()(), Eigen::AutoDiffJacobian< Functor >::operator()(), SqrtOutputKernel::operator()(), Eigen::NoOpOutputKernel::operator()(), oomph::MapMatrixMixed< KEY_TYPE_ROW, KEY_TYPE_COL, VALUE_TYPE >::operator()(), Eigen::MetisOrdering< StorageIndex >::operator()(), Eigen::internal::nullary_wrapper< Scalar, NullaryOp, has_nullary, has_unary, has_binary >::operator()(), Eigen::internal::nullary_wrapper< Scalar, NullaryOp, false, true, false >::operator()(), Eigen::internal::nullary_wrapper< Scalar, NullaryOp, false, false, true >::operator()(), Eigen::internal::minmax_coeff_visitor< Derived, is_min, NaNPropagation, isInt >::operator()(), Eigen::internal::minmax_coeff_visitor< Derived, is_min, NaNPropagation, false >::operator()(), integratorFunctor< Scalar >::operator()(), oomph::Shape::operator()(), oomph::DShape::operator()(), oomph::ElasticityTensor::operator()(), oomph::PMLTimeHarmonicElasticityTensor::operator()(), oomph::TimeHarmonicElasticityTensor::operator()(), oomph::DenseComplexMatrix::operator()(), oomph::CRComplexMatrix::operator()(), oomph::CCComplexMatrix::operator()(), oomph::Matrix< T, MATRIX_TYPE >::operator()(), oomph::CRDoubleMatrix::operator()(), oomph::DenseDoubleMatrix::operator()(), oomph::CCDoubleMatrix::operator()(), oomph::SumOfMatrices::operator()(), oomph::RankThreeTensor< T >::operator()(), oomph::RankFourTensor< T >::operator()(), oomph::RankFiveTensor< T >::operator()(), DenseLM< Scalar >::operator()(), sparseGaussianTest< Scalar >::operator()(), Eigen::internal::dhs_pack< double, DataMapper, Packet2d, StorageOrder, PanelMode, true >::operator()(), Eigen::internal::dhs_pack< double, DataMapper, Packet2d, StorageOrder, PanelMode, false >::operator()(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::operator()(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::operator()(), Eigen::internal::TensorContractionSubMapper< Scalar, Index, side, Tensor, nocontract_t, contract_t, packet_size, inner_dim_contiguous, inner_dim_reordered, Alignment, MakePointer_ >::operator()(), Eigen::internal::tribb_kernel< LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, ResInnerStride, UpLo >::operator()(), Eigen::internal::dhs_pack< Scalar, DataMapper, Packet, StorageOrder, PanelMode, UseLhs >::operator()(), TrackedVisitor< Derived, Vectorizable >::operator()(), oomph::NonLinearElasticitySmoothMesh< ELEMENT >::operator()(), oomph::LinearElasticitySmoothMesh< LINEAR_ELASTICITY_ELEMENT >::operator()(), oomph::PoissonSmoothMesh< POISSON_ELEMENT >::operator()(), Eigen::internal::dhs_cpack< double, DataMapper, Packet, PacketC, StorageOrder, Conjugate, PanelMode, true >::operator()(), Eigen::internal::dhs_cpack< double, DataMapper, Packet, PacketC, StorageOrder, Conjugate, PanelMode, false >::operator()(), Eigen::internal::dhs_cpack< Scalar, DataMapper, Packet, PacketC, StorageOrder, Conjugate, PanelMode, UseLhs >::operator()(), SmallMatrix< numberOfRows, numberOfColumns >::operator*(), Eigen::SparseMatrixBase< Derived >::operator*=(), Eigen::SparseMatrixBase< Derived >::operator/=(), oomph::DenseMatrix< T >::operator=(), Eigen::BlockSparseMatrix< Scalar_, _BlockAtCompileTime, Options_, StorageIndex_ >::operator=(), oomph::RankFiveTensor< T >::operator=(), oomph::RankFourTensor< T >::operator=(), oomph::RankThreeTensor< T >::operator=(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::operator=(), Eigen::internal::outer_product_selector_run(), oomph::FaceElement::outer_unit_normal(), oomph::QExtrudedMacroElement< 3 >::output(), oomph::QMacroElement< 2 >::output(), oomph::QMacroElement< 3 >::output(), oomph::SpaceTimeUnsteadyHeatEquations< 2 >::output(), oomph::DummyFaceElement< ELEMENT >::output(), oomph::LineVisualiser::output(), oomph::DenseMatrix< T >::output(), oomph::TetMeshFacet::output(), oomph::TetMeshFacetedSurface::output(), oomph::EulerEquations< DIM >::output(), oomph::ClampedHermiteShellBoundaryConditionElement::output(), oomph::ImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::output(), oomph::FSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::output(), output(), oomph::MyTaylorHoodElement< DIM >::output(), oomph::MyCrouzeixRaviartElement::output(), oomph::NavierStokesEquations< 2 >::output(), oomph::VorticitySmootherElement< ELEMENT >::output(), oomph::CircularPenetrator::output(), HeatedCircularPenetratorElement::output(), CircularPenetratorElement::output(), oomph::VorticitySmootherElement< ELEMENT >::output_analytical_veloc_and_vorticity(), NonRefineableBinArray::output_bin_vertices(), oomph::BlockPreconditioner< MATRIX >::output_blocks_to_files(), oomph::TriangleMesh< FLUID_ELEMENT >::output_boundary_coordinates(), oomph::TriangleMesh< ELEMENT >::output_boundary_coordinates(), oomph::SolarRadiationBase::output_diffuse_radiation_cone_max_angle(), oomph::SolarRadiationBase::output_diffuse_radiation_cone_min_angle(), oomph::PoissonEquations< 1 >::output_fct(), oomph::NavierStokesEquations< 2 >::output_fct(), oomph::GeneralisedAdvectionDiffusionEquations< 2 >::output_fct(), oomph::Mesh::output_fct_paraview(), oomph::MyProblem::output_ltes(), oomph::QExtrudedMacroElement< 3 >::output_macro_element_boundaries(), oomph::QMacroElement< 2 >::output_macro_element_boundaries(), oomph::QMacroElement< 3 >::output_macro_element_boundaries(), oomph::FiniteElement::output_paraview(), oomph::Mesh::output_paraview(), oomph::VorticitySmootherElement< ELEMENT >::output_smoothed_vorticity(), PolarNSProblem< ELEMENT >::output_streamfunction(), Eigen::internal::outputResults(), LiquidMigrationMPI2Test::outputXBallsData(), LiquidMigrationSelfTest::outputXBallsData(), oomph::TreeBasedRefineableMeshBase::p_adapt_mesh(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::p_local_eqn(), oomph::Tree::p_refine_if_required(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::p_value(), Eigen::internal::minmax_coeff_visitor< Derived, is_min, PropagateNumbers, false >::packet(), Eigen::internal::minmax_coeff_visitor< Derived, is_min, NaNPropagation, false >::packet(), Eigen::internal::evaluator< PartialReduxExpr< ArgType, MemberOp, Direction > >::packet(), TrackedVisitor< Derived, Vectorizable >::packet(), packetmath(), packetmath_complex(), packetmath_real(), Eigen::internal::nullary_wrapper< Scalar, NullaryOp, has_nullary, has_unary, has_binary >::packetOp(), Eigen::internal::nullary_wrapper< Scalar, NullaryOp, false, true, false >::packetOp(), Eigen::internal::nullary_wrapper< Scalar, NullaryOp, false, false, true >::packetOp(), Eigen::internal::UniformRandomGenerator< T >::packetOp(), Eigen::internal::NormalRandomGenerator< T >::packetOp(), ParticleBeam::ParticleBeam(), oomph::METIS::partition_mesh(), pblueNorm(), permutationmatrices(), Eigen::internal::permutation_matrix_product< ExpressionType, Side, Transposed, SparseShape >::permute_inner(), Eigen::internal::permutation_matrix_product< ExpressionType, Side, Transposed, SparseShape >::permute_outer(), Eigen::internal::permute_symm_to_fullsymm(), Eigen::internal::permute_symm_to_symm(), Eigen::BDCSVD< MatrixType_, Options_ >::perturbCol0(), oomph::ProjectionProblem< PROJECTABLE_ELEMENT >::pin_all(), FlowAroundCylinderProblem< ELEMENT >::pin_all_base_flow_dofs(), oomph::FpPressureAdvectionDiffusionProblem< ELEMENT >::pin_all_non_pressure_dofs(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::pin_all_non_pressure_dofs(), oomph::NavierStokesEquations< DIM >::pin_all_non_pressure_dofs(), oomph::SpaceTimeNavierStokesEquations< DIM >::pin_all_non_pressure_dofs(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::pin_all_non_pressure_dofs(), oomph::TLinearHeatAndElasticityElement< DIM, NNODE_1D >::pin_linear_elasticity(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::pin_p_value(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::pin_q_edge_value(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::pin_q_internal_value(), NavierStokesProblem< ELEMENT >::pin_redundant_temporal_nodes(), UnsteadyHeatProblem< ELEMENT >::pin_redundant_temporal_nodes(), UnstructuredImmersedEllipseProblem< ELEMENT >::pin_rigid_body(), oomph::VorticitySmootherElement< ELEMENT >::pin_smoothed_vorticity(), oomph::ProjectableDarcyElement< DARCY_ELEMENT >::pin_superfluous_darcy_dofs(), oomph::TLinearHeatAndElasticityElement< DIM, NNODE_1D >::pin_unsteady_heat(), PlateProblem< ELEMENT >::PlateProblem(), PlanarWave::plot(), oomph::MGSolver< DIM >::plot(), GlobalFct::plot_it(), oomph::UnsteadyHeatFluxPseudoMeltElement< ELEMENT >::plot_residual_landscape(), oomph::PMLCornerQuadMesh< ELEMENT >::PMLCornerQuadMesh(), oomph::PMLQuadMesh< ELEMENT >::PMLQuadMesh(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >::PoissonElementWithSingularity(), oomph::YoungLaplaceEquations::position(), oomph::SolidFiniteElement::position_local_eqn(), oomph::post_midpoint_update(), oomph::UpperTriangular< MATRIX >::preconditioner_solve(), oomph::BlockTriangularPreconditioner< MATRIX >::preconditioner_solve(), oomph::ILUZeroPreconditioner< CCDoubleMatrix >::preconditioner_solve(), oomph::ILUZeroPreconditioner< CRDoubleMatrix >::preconditioner_solve(), oomph::BandedBlockTriangularPreconditioner< MATRIX >::preconditioner_solve(), oomph::PseudoElasticPreconditionerSubsidiaryBlockPreconditionerOld::preconditioner_solve(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::prefetch(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::prefetch(), oomph::EulerEquations< DIM >::pressure(), oomph::KirchhoffLoveShellEquations::prestress(), oomph::PVDEquationsBase< DIM >::prestress(), Eigen::internal::print_matrix(), ForceLawsMPI2Test::printTime(), TwoParticleElasticCollisionInteraction::printTime(), WearableNurbsWall::processDebris(), PeriodicBoundaryHandler::processLocalGhostParticles(), PeriodicBoundaryHandler::processLocalInteractionData(), PeriodicBoundaryHandler::processPeriodicParticles(), PeriodicBoundaryHandler::processReceivedGhostParticleData(), Domain::processReceivedInteractionData(), product_extra(), oomph::ProjectionProblem< PROJECTABLE_ELEMENT >::project(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::prune(), oomph::AxisymmetricQTaylorHoodElement::pshape_axi_nst(), oomph::GeneralisedNewtonianAxisymmetricQTaylorHoodElement::pshape_axi_nst(), oomph::LinearisedAxisymmetricQTaylorHoodElement::pshape_lin_axi_nst(), oomph::LinearisedAxisymmetricQTaylorHoodElement::pshape_linearised_axi_nst(), oomph::LinearisedQTaylorHoodElement::pshape_linearised_nst(), oomph::GeneralisedNewtonianQTaylorHoodElement< DIM >::pshape_nst(), oomph::PRefineableGeneralisedNewtonianQCrouzeixRaviartElement< DIM >::pshape_nst(), oomph::QTaylorHoodElement< DIM >::pshape_nst(), oomph::PRefineableQCrouzeixRaviartElement< DIM >::pshape_nst(), oomph::QTaylorHoodSpaceTimeElement< DIM >::pshape_nst(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::pshape_nst(), oomph::PolarTaylorHoodElement::pshape_pnst(), oomph::QSphericalTaylorHoodElement::pshape_spherical_nst(), oomph::QTaylorHoodSpaceTimeElement< DIM >::ptest_nst(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::ptest_nst(), Eigen::internal::ptranspose(), Eigen::internal::detail::ptranspose_impl(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::q_edge(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::q_edge_index(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::q_edge_local_eqn(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::q_edge_node_number(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::q_internal(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::q_internal_local_eqn(), qr(), qr_fixedsize(), qr_kahan_matrix(), Eigen::internal::qrsolv(), oomph::PRefineableQElement< 2, INITIAL_NNODE_1D >::quad_hang_helper(), oomph::QuarterPipeMesh< ELEMENT >::QuarterPipeMesh(), Eigen::internal::QuickSplit(), Eigen::internal::r1mpyq(), Eigen::internal::r1updt(), RandomMatrix(), Eigen::randomPermutationVector(), Eigen::RandomSetter< SparseMatrixType, MapTraits, OuterPacketBits >::RandomSetter(), oomph::Shape::range_check(), oomph::DShape::range_check(), oomph::ElasticityTensor::range_check(), oomph::PMLTimeHarmonicElasticityTensor::range_check(), oomph::TimeHarmonicElasticityTensor::range_check(), oomph::Matrix< T, MATRIX_TYPE >::range_check(), oomph::RankThreeTensor< T >::range_check(), oomph::RankFourTensor< T >::range_check(), oomph::RankFiveTensor< T >::range_check(), oomph::RankFiveTensor< T >::RankFiveTensor(), oomph::RankFourTensor< T >::RankFourTensor(), oomph::RankThreeTensor< T >::RankThreeTensor(), oomph::FiniteElement::raw_dnodal_position_dt(), oomph::FiniteElement::raw_dnodal_position_gen_dt(), oomph::Data::read(), oomph::Node::read(), oomph::SolidNode::read(), MeshTriangle::read(), DPMBase::readArguments(), helpers::readArrayFromCommandLine(), helpers::readVectorFromCommandLine(), real_qz(), BrethertonElement< ELEMENT >::reassign_inflow(), oomph::PRefineableQElement< 2, INITIAL_NNODE_1D >::rebuild_from_sons(), oomph::MacroElementNodeUpdateElement< ELEMENT >::rebuild_from_sons(), oomph::VorticitySmoother< ELEMENT >::recover_vorticity(), oomph::DoubleMultiVector::redistribute(), oomph::DoubleVector::redistribute(), oomph::CRDoubleMatrix::redistribute(), Eigen::internal::GenericDimReducer< DimIndex, Self, Op >::reduce(), Eigen::internal::GenericDimReducer< 0, Self, Op >::reduce(), Eigen::internal::InnerMostDimPreserver< DimIndex, Self, Op, true >::reduce(), Eigen::internal::InnerMostDimPreserver< 0, Self, Op, true >::reduce(), Eigen::internal::InnerMostDimReducer< Self, Op, Vectorizable, UseTreeReduction >::reduce(), Eigen::internal::InnerMostDimReducer< Self, Op, true, false >::reduce(), ref_matrix(), ref_prod(), ref_vector_fixed_sizes(), oomph::TreeBasedRefineableMeshBase::refine_as_in_reference_mesh(), oomph::RefineableSolidTractionElement< ELEMENT >::refineable_fill_in_contribution_to_residuals_solid_traction(), oomph::RefineableImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::refineable_fill_in_generic_contribution_to_residuals_displ_lagr_multiplier(), oomph::RefineableFSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::refineable_fill_in_generic_contribution_to_residuals_fsi_displ_lagr_multiplier(), RefineableConvectionProblem< NST_ELEMENT, AD_ELEMENT >::RefineableConvectionProblem(), RefineableElasticCubicMesh< ELEMENT >::RefineableElasticCubicMesh(), oomph::RefineableQuadMeshWithMovingCylinder< ELEMENT >::RefineableQuadMeshWithMovingCylinder(), oomph::TetMeshFacetedClosedSurface::region_id_for_tetgen(), Eigen::internal::SparseLUImpl< Scalar, StorageIndex >::relax_snode(), helpers::removeFromCommandline(), DPMBase::removeOldFiles(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::removeOuterVectors(), MandelbrotThread::render(), replicate(), oomph::BrethertonSpineMesh< ELEMENT, INTERFACE_ELEMENT >::reposition_spines(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::reserveInnerVectors(), oomph::NonLinearElasticitySmoothMesh< ELEMENT >::reset(), GlobalFct::reset(), oomph::SolidICProblem::reset_original_state(), oomph::FpPressureAdvectionDiffusionProblem< ELEMENT >::reset_pin_status(), oomph::NavierStokesSchurComplementPreconditioner::reset_pin_status(), oomph::ImmersedRigidBodyTriangleMeshPolygon::reset_reference_configuration(), reshape_block(), oomph::CRComplexMatrix::residual(), oomph::CCComplexMatrix::residual(), oomph::DenseComplexMatrix::residual(), oomph::HelmholtzMGPreconditioner< DIM >::residual_norm(), oomph::DenseMatrix< T >::resize(), oomph::RankThreeTensor< T >::resize(), oomph::RankFourTensor< T >::resize(), oomph::RankFiveTensor< T >::resize(), oomph::NonlinearSurfaceContactElement< ELEMENT >::resulting_contact_force(), oomph::LinearSurfaceContactElement< ELEMENT >::resulting_contact_force(), reverse(), Eigen::roots_to_monicPolynomial(), oomph::OcTree::rotate(), oomph::Rotateable< ELEMENT >::rotate(), Rotateable< ELEMENT >::rotate(), cast_test_impl< SrcType, DstType, RowsAtCompileTime, ColsAtCompileTime >::run(), cast_tests_impl< RowsAtCompileTime, ColsAtCompileTime, ScalarTypes >::run(), casting_test< SrcScalar, TgtScalar >::run(), Eigen::internal::visitor_impl< Visitor, Derived, Dynamic, false, false, ShortCircuitEvaluation >::run(), Eigen::internal::visitor_impl< Visitor, Derived, Dynamic, true, false, ShortCircuitEvaluation >::run(), Eigen::internal::redux_impl< Func, Evaluator, DefaultTraversal, NoUnrolling >::run(), Eigen::internal::redux_impl< Func, Evaluator, SliceVectorizedTraversal, Unrolling >::run(), Eigen::internal::TensorExecutor< Expression, DefaultDevice, true, TiledEvaluation::Off >::run(), Eigen::internal::StridedLinearBufferCopy< Scalar, IndexType >::Run(), mapstaticmethods_impl< PlainObjectType, false, IsVector >::run(), mapstaticmethods_impl< PlainObjectType, true, false >::run(), Eigen::internal::sparse_time_dense_product_impl< SparseLhsType, DenseRhsType, DenseResType, AlphaType, ColMajor, true >::run(), Eigen::internal::sparse_time_dense_product_impl< SparseLhsType, DenseRhsType, DenseResType, typename DenseResType::Scalar, ColMajor, false >::run(), Eigen::internal::TensorBlockAssignment< Scalar, NumDims, TensorBlockExpr, IndexType >::Run(), DiskShockWaveProblem< ELEMENT, TIMESTEPPER >::run(), Eigen::internal::transposition_matrix_product< ExpressionType, Side, Transposed, ExpressionShape >::run(), Eigen::internal::Assignment< DstXprType, SrcXprType, Functor, Sparse2Dense, Weak >::run(), Eigen::internal::product_triangular_matrix_matrix< Scalar, Index, Mode, false, LhsStorageOrder, ConjugateLhs, RhsStorageOrder, ConjugateRhs, ColMajor, ResInnerStride, Version >::run(), Eigen::internal::general_matrix_vector_product< Index, LhsScalar, LhsMapper, RowMajor, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version >::run(), Eigen::internal::general_matrix_vector_product< Index, LhsScalar, LhsMapper, ColMajor, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version >::run(), Eigen::internal::general_matrix_matrix_product< Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, ColMajor, ResInnerStride >::run(), Eigen::internal::selfadjoint_matrix_vector_product< Scalar, Index, StorageOrder, UpLo, ConjugateLhs, ConjugateRhs, Version >::run(), Eigen::internal::triangular_assignment_loop< Kernel, Mode, Dynamic, SetOpposite >::run(), Eigen::internal::quaternionbase_assign_impl< Other, 3, 3 >::run(), loadColData_impl< RhsMapper, linear >::run(), loadColData_impl< RhsMapper, true >::run(), Eigen::internal::TensorBlockAssignment< Scalar, NumDims, TensorBlockExpr, IndexType >::InnerDimAssign< true, Evaluator >::Run(), Eigen::internal::TensorPrinter< Tensor, rank, Format, EnableIf >::run(), run_bdmp_spec_1(), run_navier_stokes_outflow(), Eigen::ForkJoinScheduler::RunParallelForAsync(), Eigen::internal::rwupdt(), Eigen::saveMarket(), Eigen::saveMarketDense(), SolidProblem< ELEMENT_TYPE >::saveSolidMesh(), oomph::NavierStokesEquations< DIM >::scalar_value_fct_paraview(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::scalar_value_fct_paraview(), oomph::SpaceTimeUnsteadyHeatEquations< SPATIAL_DIM >::scalar_value_fct_paraview(), oomph::SpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >::scalar_value_fct_paraview(), oomph::MultiPoissonEquations< DIM, NFIELDS >::scalar_value_paraview(), oomph::PoissonEquations< DIM >::scalar_value_paraview(), oomph::SpaceTimeUnsteadyHeatEquations< SPATIAL_DIM >::scalar_value_paraview(), oomph::SpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >::scalar_value_paraview(), oomph::Mesh::scale_mesh(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::scatterPacket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::scatterPacket(), Eigen::DGMRES< MatrixType_, Preconditioner_ >::schurValues(), Eigen::TensorEvaluator< const TensorFFTOp< FFT, ArgType, FFTResultType, FFTDir >, Device >::scramble_FFT(), oomph::SecondInvariantHelper::second_invariant(), Eigen::BDCSVD< MatrixType_, Options_ >::secularEq(), oomph::MyProblem::segregated_pin_indices(), oomph::SelfStartingBDF2::SelfStartingBDF2(), NurbsSurface::set(), WearableNurbsWall::set(), ConvectionProblem< NST_ELEMENT, AD_ELEMENT >::set_boundary_conditions(), DDConvectionProblem< NST_ELEMENT, AD_ELEMENT >::set_boundary_conditions(), oomph::ImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::set_boundary_shape_geom_object_pt(), AxiPoroProblem< ELEMENT, TIMESTEPPER >::set_boundary_values(), ChutePeriodic::set_chute_parameters(), VariableBottom::set_chute_parameters(), oomph::Mesh::set_consistent_pinned_values_for_continuation(), HeatedCircularPenetratorElement::set_contact_element_mesh_pt(), CircularPenetratorElement::set_contact_element_mesh_pt(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >::set_dirichlet_value_on_node(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::set_dirichlet_value_on_pressure_dof(), oomph::Problem::set_dofs(), oomph::Mesh::set_elemental_internal_time_stepper(), oomph::NavierStokesImpedanceTractionElement< BULK_NAVIER_STOKES_ELEMENT, WOMERSLEY_ELEMENT, DIM >::set_external_data_from_navier_stokes_outflow_mesh(), Eigen::internal::set_from_triplets(), Eigen::internal::set_from_triplets_sorted(), oomph::SolidMesh::set_lagrangian_nodal_coordinates(), oomph::MacroElementNodeUpdateElement< ELEMENT >::set_node_update_info(), oomph::TetMeshFacet::set_one_based_boundary_id(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::set_p_value(), oomph::SurfaceContactElementBase< ELEMENT >::set_penetrator_pt(), oomph::Problem::set_pinned_values_to_zero(), oomph::HermiteQuadMesh< ELEMENT >::set_position_of_boundary_node(), oomph::HermiteQuadMesh< ELEMENT >::set_position_of_node(), oomph::Node::set_position_time_stepper(), oomph::KirchhoffLoveShellEquations::set_prestress_pt(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::set_q_edge(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::set_q_internal(), oomph::MGSolver< DIM >::set_self_test_vector(), oomph::MyProblem::set_up_impulsive_initial_condition(), oomph::GeneralElasticityTensor::set_value(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::set_velocity_dirichlet_value_on_node(), oomph::TetMeshFacet::set_vertex_pt(), oomph::Steady< NSTEPS >::set_weights(), oomph::SingularNavierStokesSolutionElement< WRAPPED_NAVIER_STOKES_ELEMENT >::set_wrapped_navier_stokes_element_pt(), SingularPoissonSolutionElement< WRAPPED_POISSON_ELEMENT >::set_wrapped_poisson_element_pt(), PSD::setDistributionLogNormal(), PSD::setDistributionNormal(), PSD::setDistributionPhiNormal(), ParticleSpecies::setMaxInteractionDistance(), Calibration::setPSD(), Material::setPSD(), setrand_eigen_sumeq(), LevelSetWall::setShapeCube(), LevelSetWall::setShapeCylinder(), LevelSetWall::setShapeDiamond(), LevelSetWall::setShapeFourSided(), LevelSetWall::setShapeSphere(), oomph::UpperTriangular< MATRIX >::setup(), oomph::TwoPlusThreeUpperTriangularWithReplace< MATRIX >::setup(), oomph::CoarseTwoPlusTwoPlusOne< MATRIX >::setup(), oomph::OnePlusFourWithTwoCoarse< MATRIX >::setup(), oomph::BlockDiagonalPreconditioner< MATRIX >::setup(), oomph::BlockTriangularPreconditioner< MATRIX >::setup(), oomph::MatrixBasedLumpedPreconditioner< MATRIX >::setup(), oomph::ILUZeroPreconditioner< CCDoubleMatrix >::setup(), oomph::ILUZeroPreconditioner< CRDoubleMatrix >::setup(), oomph::PseudoElasticPreconditioner::setup(), oomph::PseudoElasticPreconditionerSubsidiaryPreconditionerOld::setup(), oomph::PseudoElasticPreconditionerSubsidiaryBlockPreconditionerOld::setup(), oomph::ExactDGPBlockPreconditioner< MATRIX >::setup(), oomph::BandedBlockTriangularPreconditioner< MATRIX >::setup(), oomph::SpaceTimeNavierStokesSubsidiaryPreconditioner::setup(), oomph::MyAlgebraicCollapsibleChannelMesh< ELEMENT >::setup_algebraic_node_update(), oomph::AlgebraicChannelWithLeafletMesh< ELEMENT >::setup_algebraic_node_update(), oomph::AlgebraicCollapsibleChannelMesh< ELEMENT >::setup_algebraic_node_update(), oomph::AlgebraicFSIDrivenCavityMesh< ELEMENT >::setup_algebraic_node_update(), oomph::AlgebraicElementBase::setup_algebraic_node_update(), oomph::TetMeshBase::setup_boundary_coordinates(), oomph::XdaTetMesh< ELEMENT >::setup_boundary_coordinates(), oomph::UnstructuredTwoDMeshGeometryBase::setup_boundary_coordinates(), oomph::BrickMeshBase::setup_boundary_element_info(), oomph::QuadMeshBase::setup_boundary_element_info(), oomph::HermiteQuadMesh< ELEMENT >::setup_boundary_element_info(), oomph::HelmholtzMGPreconditioner< DIM >::setup_coarsest_level_structures(), MortaringHelpers::setup_constraint_elements_at_nodes(), oomph::TetMeshFacetedSurface::setup_facet_connectivity_for_tetgen(), oomph::FourierDecomposedHelmholtzDtNMesh< ELEMENT >::setup_gamma(), oomph::HelmholtzDtNMesh< ELEMENT >::setup_gamma(), oomph::MGSolver< DIM >::setup_interpolation_matrices(), oomph::HelmholtzMGPreconditioner< DIM >::setup_interpolation_matrices(), RefineableDrivenCavityProblem< ELEMENT >::setup_line_plot_points(), RectangularDrivenCavityProblem< ELEMENT >::setup_line_plot_points(), oomph::HelmholtzMGPreconditioner< DIM >::setup_mg_structures(), oomph::SolidICProblem::setup_problem(), oomph::OcTree::setup_static_data(), oomph::StefanBoltzmannHelper::setup_stefan_boltzmann_visibility(), SmoothChute::setupInitialConditions(), ChangingTOIParticle::setupInitialConditions(), clumpTest::setupInitialConditions(), CGHandlerSelfTest::setupInitialConditions(), NewtonsCradleSelftest::setupInitialConditions(), SquarePacking::setupInitialConditions(), DPM::setupInitialConditions(), ParticleParticleCollision::setupInitialConditions(), CoilSelfTest::setupInitialConditions(), ScalingTestRun::setupInitialConditions(), GranularCollapse::setupInitialConditions(), Packing::setupInitialConditions(), MpiMaserChuteTest::setupInitialConditions(), ScaleCoupledBeam::setupMercury(), MeshTriangle::setVertexIds(), oomph::PRefineableQElement< 2, INITIAL_NNODE_1D >::shape(), oomph::PRefineableQElement< 3, INITIAL_NNODE_1D >::shape(), oomph::QElement< 2, NNODE_1D >::shape(), oomph::QElement< 3, NNODE_1D >::shape(), oomph::QSpectralElement< 2, NNODE_1D >::shape(), oomph::QSpectralElement< 3, NNODE_1D >::shape(), oomph::ClampedHermiteShellBoundaryConditionElement::shape(), oomph::NavierStokesSpaceTimeTractionElement< ELEMENT >::shape_and_test_at_knot(), oomph::NavierStokesMixedOrderSpaceTimeTractionElement< ELEMENT >::shape_and_test_at_knot(), oomph::QTaylorHoodMixedOrderSpaceTimeElement< DIM >::shape_u_nst(), oomph::QUnsteadyHeatMixedOrderSpaceTimeElement< SPATIAL_DIM, NNODE_1D >::shape_ust_heat(), SheetGlueProblem< ELEMENT >::SheetGlueProblem(), ShellProblem< ELEMENT >::ShellProblem(), oomph::Mesh::shift_time_values(), oomph::SelfStartingBDF2::shift_time_values(), oomph::IMRBase::shift_time_values(), oomph::Steady< NSTEPS >::shift_time_values(), oomph::NewmarkBDF< NSTEPS >::shift_time_values(), oomph::BDF< NSTEPS >::shift_time_values(), oomph::TR::shift_time_values(), oomph::MyProblem::should_doc_this_step(), Eigen::SparseLU< MatrixType_, OrderingType_ >::signDeterminant(), oomph::SimpleCubicScaffoldTetMesh::SimpleCubicScaffoldTetMesh(), oomph::SimpleRectangularQuadMesh< ELEMENT >::SimpleRectangularQuadMesh(), oomph::SimpleRectangularTriMesh< ELEMENT >::SimpleRectangularTriMesh(), SimpleSpineMesh< ELEMENT >::SimpleSpineMesh(), SmallMatrix< numberOfRows, numberOfColumns >::SmallMatrix(), oomph::TetMeshBase::snap_nodes_onto_geometric_objects(), oomph::TetMeshBase::snap_to_quadratic_surface(), SolarRadiationProblem< ELEMENT >::SolarRadiationProblem(), oomph::QPVDElementWithContinuousPressure< DIM >::solid_pshape(), oomph::SolidNode::SolidNode(), RefineableRotatingCylinderProblem< ELEMENT >::solve(), oomph::HSL_MA42::solve(), oomph::HelmholtzGMRESMG< MATRIX >::solve(), oomph::HelmholtzFGMRESMG< MATRIX >::solve(), oomph::ARPACK::solve_eigenproblem(), oomph::LAPACK_QZ::solve_eigenproblem(), oomph::GS< MATRIX >::solve_helper(), oomph::GS< CRDoubleMatrix >::solve_helper(), oomph::HelmholtzGMRESMG< MATRIX >::solve_helper(), oomph::HelmholtzFGMRESMG< MATRIX >::solve_helper(), Eigen::HybridNonLinearSolver< FunctorType, Scalar >::solveInit(), Eigen::SparseLUMatrixUReturnType< MatrixLType, MatrixUType >::solveInPlace(), Eigen::internal::MappedSuperNodalMatrix< Scalar_, StorageIndex_ >::solveInPlace(), Eigen::HybridNonLinearSolver< FunctorType, Scalar >::solveNumericalDiffInit(), Eigen::HybridNonLinearSolver< FunctorType, Scalar >::solveNumericalDiffOneStep(), Eigen::HybridNonLinearSolver< FunctorType, Scalar >::solveOneStep(), Eigen::SparseLUMatrixUReturnType< MatrixLType, MatrixUType >::solveTransposedInPlace(), Eigen::internal::MappedSuperNodalMatrix< Scalar_, StorageIndex_ >::solveTransposedInPlace(), oomph::CRDoubleMatrix::sort_entries(), Eigen::internal::sortWithPermutation(), CGCoordinates::spaceEvenly(), oomph::Problem::sparse_assemble_row_or_column_compressed_with_lists(), oomph::Problem::sparse_assemble_row_or_column_compressed_with_maps(), oomph::Problem::sparse_assemble_row_or_column_compressed_with_two_arrays(), oomph::Problem::sparse_assemble_row_or_column_compressed_with_two_vectors(), oomph::Problem::sparse_assemble_row_or_column_compressed_with_vectors_of_pairs(), sparse_basic(), sparse_block(), oomph::DenseMatrix< T >::sparse_indexed_output_helper(), oomph::CRMatrix< T >::sparse_indexed_output_helper(), oomph::CCMatrix< T >::sparse_indexed_output_helper(), oomph::SumOfMatrices::sparse_indexed_output_helper(), oomph::CRDoubleMatrix::sparse_indexed_output_with_offset(), Eigen::internal::sparse_selfadjoint_time_dense_product(), Eigen::internal::sparse_sparse_product_with_pruning_impl(), Eigen::internal::sparse_sparse_to_dense_product_impl(), sparse_vector(), SpineInclinedPlaneMesh< ELEMENT >::SpineInclinedPlaneMesh(), oomph::DoubleVectorHelpers::split(), oomph::TetMeshBase::split_elements_in_corners(), oomph::Tree::split_if_required(), Eigen::RealQZ< MatrixType_ >::splitOffTwoRows(), oomph::ImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::square_of_l2_norm_of_error(), stable_norm(), Eigen::internal::stable_norm_impl(), StaticDiskCompressionProblem< ELEMENT >::StaticDiskCompressionProblem(), StefanBoltzmannProblem< ELEMENT >::StefanBoltzmannProblem(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::storePacketBlock_helper< SubPacket, Scalar_, n, idx >::store(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::storePacketBlock_helper< SubPacket, std::complex< float >, n, idx >::store(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::storePacketBlock_helper< SubPacket, std::complex< double >, n, idx >::store(), Eigen::internal::PacketBlockManagement< Index, Scalar, Packet, n, idx, StorageOrder >::store(), Eigen::internal::PacketBlockManagement< Index, Scalar, Packet, n, idx, RowMajor >::store(), Eigen::internal::PacketBlockManagement< Index, Scalar, Packet, n, -1, StorageOrder >::store(), Eigen::internal::PacketBlockManagement< Index, Scalar, Packet, n, -1, RowMajor >::store(), oomph::VorticitySmootherElement< ELEMENT >::stored_dof_to_recoverable_dof(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::storePacket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::storePacket(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::storePacketBlock(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::storePacketBlock(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, 1 >::storePacketPartial(), Eigen::internal::blas_data_mapper< Scalar, Index, StorageOrder, AlignmentType, Incr >::storePacketPartial(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::strain_rate(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >::strain_rate(), oomph::PolarNavierStokesEquations::strain_rate(), oomph::SpaceTimeNavierStokesEquations< DIM >::strain_rate(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >::strain_rate(), oomph::SphericalNavierStokesEquations::strain_rate(), oomph::LinearisedNavierStokesEquations::strain_rate(), oomph::PolarNavierStokesEquations::strain_rate_by_r(), FlowFrontChute::stretch(), Eigen::BDCSVD< MatrixType_, Options_ >::structured_update(), Eigen::SparseMatrixBase< Derived >::sum(), svd_fill_random(), swapBytes(), oomph::AxisymmetricPoroelasticityEquations::switch_off_darcy(), Eigen::internal::symm_pack_complex_lhs_helper(), Eigen::internal::symm_pack_complex_rhs_helper(), Eigen::internal::symm_pack_lhs_helper(), Eigen::internal::symm_pack_rhs_helper(), Eigen::TensorContractionEvaluatorBase< Derived >::TensorContractionEvaluatorBase(), Eigen::TensorEvaluator< const TensorChippingOp< DimId, ArgType >, Device >::TensorEvaluator(), Eigen::TensorEvaluator< const TensorConcatenationOp< Axis, LeftArgType, RightArgType >, Device >::TensorEvaluator(), test_2D(), test_2D_fft_ifft_invariant(), test_2D_sycl(), test_3d(), test_3D_fft_ifft_invariant(), test_argmax_dim(), test_argmin_dim(), test_array(), test_assign(), test_assign_of_const_tensor(), test_async_multithread_chip(), test_async_multithread_elementwise(), test_binary_parallel_for(), test_block_io_copy_using_reordered_dimensions(), test_block_io_zero_stride(), test_broadcast_sycl(), test_broadcast_sycl_fixed(), test_casting(), test_chip_as_lvalue(), test_chip_as_lvalue_sycl(), test_chip_in_expr(), test_chip_raw_data_col_major(), test_chip_raw_data_row_major(), test_compound_assignment(), test_concat(), test_concatenation_as_lvalue(), test_consistency(), test_const(), test_constants(), test_custom_binary_op(), test_custom_binary_op_sycl(), test_custom_unary_op(), test_custom_unary_op_sycl(), test_dynamic_bool(), test_dynamic_chip(), test_dynamic_chip_sycl(), test_dynamic_index_list(), test_empty_shuffling(), test_empty_slice(), test_equality(), test_expr_reverse(), test_expr_roll(), test_expr_shuffling(), test_first_dim_reductions_max_sycl(), test_first_dim_reductions_mean_sycl(), test_float_ceiling(), test_float_flooring(), test_float_rounding(), test_forced_eval_sycl(), test_from_tensor(), test_full_reductions(), test_functors(), test_gaussian(), test_gaussian_sycl(), test_gpu_contractions(), test_holes(), test_image_op_sycl(), test_imagenet_patches(), test_imagenet_patches_sycl(), test_innermost_first_dims(), test_innermost_last_dims(), test_isfinite(), test_isinf(), test_isnan(), test_larg_expr1D(), test_larg_expr2D(), test_larg_expr3D(), test_last_dim_reductions_mean_sycl(), test_last_dim_reductions_sum_sycl(), test_last_reductions_mean_sycl(), test_last_reductions_sum_sycl(), test_memcpy(), test_mixed_index_list(), test_multiple_dims(), test_multithread_chip(), test_multithread_compound_assignment(), test_multithread_elementwise(), test_multithread_shuffle(), test_nested_ops_with_ref(), test_nnls_repeated_calls_to_compute_and_solve(), test_orderings(), test_padded_expr(), test_parallelism(), test_patch_no_extra_dim(), test_patch_no_extra_dim_sycl(), test_patch_padding_same(), test_patch_padding_same_sycl(), test_patch_padding_valid(), test_patch_padding_valid_same_value(), test_patch_padding_valid_same_value_sycl(), test_patch_padding_valid_sycl(), test_plus(), test_plus_equal(), test_reduce_middle_dims(), test_reductions_in_expr(), test_ref_in_expr(), test_ref_of_ref(), test_reshape_as_lvalue(), test_reshape_in_expr(), test_select(), test_shuffle_unshuffle(), test_shuffling_as_value(), test_signed_32bit(), test_signed_64bit(), test_simple_assign(), test_simple_broadcasting(), test_simple_broadcasting_n_by_one(), test_simple_broadcasting_one_by_n(), test_simple_broadcasting_one_by_n_by_one_1d(), test_simple_broadcasting_one_by_n_by_one_2d(), test_simple_chip(), test_simple_concatenation(), test_simple_image_patch_sycl(), test_simple_inflation(), test_simple_inflation_sycl(), test_simple_padding(), test_simple_patch(), test_simple_patch_sycl(), test_simple_reductions(), test_simple_reshape(), test_simple_reverse(), test_simple_roll(), test_simple_shuffling(), test_simple_shuffling_sycl(), test_simple_slice(), test_simple_striding(), test_simple_swap(), test_simple_swap_sycl(), test_simple_trace(), test_slice(), test_slice_as_lvalue(), test_slice_in_expr(), test_slice_raw_data(), test_slices(), test_static_broadcasting(), test_static_chip_sycl(), test_static_dims(), test_static_index_list(), test_static_reshape(), test_stl_iterators(), test_stress_eventcount(), test_stress_runqueue(), test_strided_slice(), test_strided_slice_as_rhs_sycl(), test_strided_slice_write(), test_strided_slice_write_sycl(), test_striding_as_lvalue(), test_sub_fft_ifft_invariant(), test_swap_as_lvalue(), test_swap_as_lvalue_sycl(), test_sycl_argmax_dim(), test_sycl_argmin_dim(), test_sycl_computations(), test_sycl_contraction_sizes(), test_tensor_asym(), test_tensor_dynsym(), test_tensor_epsilon(), test_tensor_maps(), test_tensor_product(), test_tensor_randacc(), test_tensor_sym(), test_trace_in_expr(), test_trivial_reductions(), test_type2index_list(), test_type_cast(), test_type_casting(), test_unsigned_32bit(), test_unsigned_64bit(), test_user_defined_reductions(), test_vectorized_broadcasting(), TreeTest< Dim >::testIntersect2(), testMatrixType(), TreeTest< Dim >::testMinimize2(), testPascal(), oomph::TetgenMesh< ELEMENT >::TetgenMesh(), oomph::TetgenScaffoldMesh::TetgenScaffoldMesh(), oomph::ThinLayerBrickOnTetMesh< ELEMENT >::ThinLayerBrickOnTetMesh(), oomph::TimeStepper::time_derivative(), oomph::IMRODEElement::time_interpolate_time(), oomph::IMRODEElement::time_interpolate_u(), oomph::AxisymmetricNavierStokesEquations::traction(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations::traction(), oomph::AxisymmetricPoroelasticityEquations::transform_basis(), oomph::PoroelasticityEquations< DIM >::transform_basis(), oomph::DarcyEquations< DIM >::transform_basis(), oomph::FiniteElement::transform_derivatives(), oomph::FiniteElement::transform_derivatives_diagonal(), oomph::FiniteElement::transform_second_derivatives_template(), LocalExpansion::translateLocalExpansion(), Multipole::TranslateMultipoleExpansionTo(), SmallMatrix< numberOfRows, numberOfColumns >::transpose(), oomph::TriangleMeshPolygon::TriangleMeshPolygon(), oomph::TriangleScaffoldMesh::TriangleScaffoldMesh(), oomph::FluidInterfaceElement::u(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::u_index_axisym_poroelasticity(), Eigen::internal::ldlt_inplace< Lower >::unblocked(), NurbsSurface::unclampKnots(), Eigen::SparseMatrix< Scalar_, Options_, StorageIndex_ >::uncompress(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >::undo_dirichlet_bc_on_all_nodes(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >::undo_dirichlet_bc_on_node(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::undo_dirichlet_bc_on_pressure_dof(), oomph::MyProblem::undo_segregated_pinning(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >::undo_velocity_dirichlet_bc_on_node(), FlowAroundCylinderProblem< ELEMENT >::unpin_all_base_flow_dofs(), UnstructuredImmersedEllipseProblem< ELEMENT >::unpin_rigid_body(), StabilityProblem< BASE_ELEMENT, PERTURBED_ELEMENT >::unsteady_run(), UnsteadyHeatMeltProblem< ELEMENT >::UnsteadyHeatMeltProblem(), UnsteadyHeatProblem< ELEMENT >::UnsteadyHeatProblem(), UnstructuredFSIProblem< FLUID_ELEMENT, SOLID_ELEMENT >::UnstructuredFSIProblem(), oomph::GMRESBlockPreconditioner::update(), oomph::GMRES< MATRIX >::update(), oomph::AugmentedProblemGMRES::update(), oomph::ComplexGMRES< MATRIX >::update(), oomph::HelmholtzGMRESMG< MATRIX >::update(), oomph::HelmholtzFGMRESMG< MATRIX >::update(), update_latest_fixed_point_iteration_guess_for_strain_rate(), oomph::SolarRadiationBase::update_limiting_angles(), oomph::LineVisualiser::update_plot_points_coordinates(), Membrane::updateFaceNeighbors(), Eigen::internal::ldlt_inplace< Lower >::updateInPlace(), SpeciesHandler::useAngularDOFs(), oomph::PMLFourierDecomposedHelmholtzEquations::values_to_be_pinned_on_outer_pml_boundary(), oomph::PMLTimeHarmonicLinearElasticityEquationsBase< DIM >::values_to_be_pinned_on_outer_pml_boundary(), Eigen::internal::vecColLoop(), vecColLoopVSX(), Eigen::internal::vecLoop(), vectorRedux(), vectorwiseop_matrix(), vecVSXLoop(), verify_euler(), oomph::TetMeshFacetedSurface::vertex_coordinate(), oomph::RefineableLinearisedAxisymmetricQTaylorHoodElement::vertex_node_pt(), oomph::RefineableLinearisedAxisymmetricQCrouzeixRaviartElement::vertex_node_pt(), oomph::TLinearHeatAndElasticityElement< DIM, NNODE_1D >::vertex_node_pt(), RefineableBuoyantQCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement::vertex_node_pt(), oomph::RefineableBuoyantQSphericalCrouzeixRaviartElement::vertex_node_pt(), oomph::RefineableDoubleBuoyantQCrouzeixRaviartElement< DIM >::vertex_node_pt(), ModalPRefineableQPoissonElement< DIM >::vertex_node_pt(), oomph::RefineablePolarStreamfunctionElement::vertex_node_pt(), oomph::RefineableQAdvectionDiffusionElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQGeneralisedAdvectionDiffusionElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQSUPGAdvectionDiffusionElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQAdvectionDiffusionReactionElement< NREAGENT, DIM, NNODE_1D >::vertex_node_pt(), oomph::TAdvectionDiffusionReactionElement< NREAGENT, DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQAxisymAdvectionDiffusionElement< NNODE_1D >::vertex_node_pt(), oomph::RefineableQGeneralisedAxisymAdvectionDiffusionElement< NNODE_1D >::vertex_node_pt(), oomph::TAxisymmetricLinearElasticityElement< NNODE_1D >::vertex_node_pt(), oomph::RefineableAxisymmetricQTaylorHoodElement::vertex_node_pt(), oomph::RefineableAxisymmetricQCrouzeixRaviartElement::vertex_node_pt(), oomph::AxisymmetricTCrouzeixRaviartElement::vertex_node_pt(), oomph::AxisymmetricTTaylorHoodElement::vertex_node_pt(), oomph::TAxisymmetricPoroelasticityElement< ORDER >::vertex_node_pt(), oomph::TRaviartThomasDarcyElement< ORDER >::vertex_node_pt(), oomph::TDisplacementBasedFoepplvonKarmanElement< NNODE_1D >::vertex_node_pt(), oomph::TFoepplvonKarmanElement< NNODE_1D >::vertex_node_pt(), oomph::TFourierDecomposedHelmholtzElement< NNODE_1D >::vertex_node_pt(), oomph::RefineableGeneralisedNewtonianAxisymmetricQTaylorHoodElement::vertex_node_pt(), oomph::RefineableGeneralisedNewtonianAxisymmetricQCrouzeixRaviartElement::vertex_node_pt(), oomph::GeneralisedNewtonianAxisymmetricTCrouzeixRaviartElement::vertex_node_pt(), oomph::GeneralisedNewtonianAxisymmetricTTaylorHoodElement::vertex_node_pt(), oomph::RefineableGeneralisedNewtonianQTaylorHoodElement< DIM >::vertex_node_pt(), oomph::RefineableGeneralisedNewtonianQCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::PRefineableGeneralisedNewtonianQCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::GeneralisedNewtonianTCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::GeneralisedNewtonianTTaylorHoodElement< DIM >::vertex_node_pt(), oomph::SpectralPeriodicOrbitElement< NNODE_1D >::vertex_node_pt(), oomph::PseudoSolidNodeUpdateElement< BASIC, SOLID >::vertex_node_pt(), oomph::RefineablePseudoSolidNodeUpdateElement< BASIC, SOLID >::vertex_node_pt(), oomph::QElement< 1, NNODE_1D >::vertex_node_pt(), oomph::QElement< 2, NNODE_1D >::vertex_node_pt(), oomph::QElement< 3, NNODE_1D >::vertex_node_pt(), oomph::QSpectralElement< 1, NNODE_1D >::vertex_node_pt(), oomph::QSpectralElement< 2, NNODE_1D >::vertex_node_pt(), oomph::QSpectralElement< 3, NNODE_1D >::vertex_node_pt(), oomph::TElement< 1, NNODE_1D >::vertex_node_pt(), oomph::TElement< 2, NNODE_1D >::vertex_node_pt(), oomph::TElement< 3, NNODE_1D >::vertex_node_pt(), oomph::RefineableQHelmholtzElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::THelmholtzElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQLinearElasticityElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::PRefineableQLinearElasticityElement< DIM >::vertex_node_pt(), oomph::TLinearElasticityElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQLinearWaveElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableLinearisedQCrouzeixRaviartElement::vertex_node_pt(), oomph::RefineableLinearisedQTaylorHoodElement::vertex_node_pt(), oomph::RefineableBuoyantQCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::RefineableQTaylorHoodElement< DIM >::vertex_node_pt(), oomph::RefineableQCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::PRefineableQCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::TCrouzeixRaviartElement< DIM >::vertex_node_pt(), oomph::TTaylorHoodElement< DIM >::vertex_node_pt(), oomph::TPMLFourierDecomposedHelmholtzElement< NNODE_1D >::vertex_node_pt(), oomph::RefineableQPMLHelmholtzElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TPMLHelmholtzElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TPMLTimeHarmonicLinearElasticityElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQPoissonElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::PRefineableQPoissonElement< DIM >::vertex_node_pt(), oomph::RefineableQSpectralPoissonElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TPoissonElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineablePolarTaylorHoodElement::vertex_node_pt(), oomph::RefineablePolarCrouzeixRaviartElement::vertex_node_pt(), oomph::RefineableQPVDElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQPVDElementWithPressure< DIM >::vertex_node_pt(), oomph::RefineableQPVDElementWithContinuousPressure< DIM >::vertex_node_pt(), oomph::TPVDElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TPVDBubbleEnrichedElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TPVDElementWithContinuousPressure< DIM >::vertex_node_pt(), oomph::RefineableQTaylorHoodSpaceTimeElement< DIM >::vertex_node_pt(), oomph::RefineableQTaylorHoodMixedOrderSpaceTimeElement< DIM >::vertex_node_pt(), oomph::RefineableQUnsteadyHeatSpaceTimeElement< SPATIAL_DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQUnsteadyHeatMixedOrderSpaceTimeElement< SPATIAL_DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQSphericalAdvectionDiffusionElement< NNODE_1D >::vertex_node_pt(), oomph::RefineableQSphericalTaylorHoodElement::vertex_node_pt(), oomph::RefineableQSphericalCrouzeixRaviartElement::vertex_node_pt(), oomph::TTimeHarmonicFourierDecomposedLinearElasticityElement< NNODE_1D >::vertex_node_pt(), oomph::RefineableQTimeHarmonicLinearElasticityElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TTimeHarmonicLinearElasticityElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQUnsteadyHeatElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::TUnsteadyHeatElement< DIM, NNODE_1D >::vertex_node_pt(), oomph::RefineableQYoungLaplaceElement< NNODE_1D >::vertex_node_pt(), oomph::TetMeshFacet::vertex_pt(), oomph::TetMeshFacetedSurface::vertex_pt(), oomph::VorticitySmootherElement< ELEMENT >::vorticity_and_its_derivs(), oomph::VorticitySmootherElement< ELEMENT >::vorticity_dof_to_container_id(), WearableTriangulatedWall::WearableTriangulatedWall(), oomph::TimeStepper::weight(), oomph::Steady< NSTEPS >::weight(), oomph::WomersleyMesh< WOMERSLEY_ELEMENT >::WomersleyMesh(), NurbsSurface::wrapAroundInU(), NurbsSurface::wrapAroundInV(), MeshTriangle::write(), oomph::GmshTetScaffoldMesh::write_geo_file(), oomph::QElement< 3, NNODE_1D >::write_paraview_output_offset_information(), oomph::TElement< 2, NNODE_1D >::write_paraview_output_offset_information(), oomph::TElement< 3, NNODE_1D >::write_paraview_output_offset_information(), oomph::TElement< 2, NNODE_1D >::write_tecplot_zone_footer(), oomph::TElement< 3, NNODE_1D >::write_tecplot_zone_footer(), BaseCluster::writeAmatFile(), VTKData::writePointData(), LevelSetWall::writeToFile(), SolidProblem< ELEMENT_TYPE >::writeToVTK(), NurbsWall::writeVTK(), SuperQuadricParticleVtkWriter::writeVTKOrientation(), NurbsWall::writeWallDetailsVTK(), WearableNurbsWall::writeWallDetailsVTK(), WallHandler::writeWallDetailsVTKBoundingBox(), oomph::XdaTetMesh< ELEMENT >::XdaTetMesh(), Eigen::internal::zeroAccumulators(), zeroReduction(), AxisymmetricVibratingShellProblem< ELEMENT >::~AxisymmetricVibratingShellProblem(), BubbleInChannelProblem< ELEMENT >::~BubbleInChannelProblem(), DropInChannelProblem< ELEMENT >::~DropInChannelProblem(), oomph::GeneralPurposeBlockPreconditioner< MATRIX >::~GeneralPurposeBlockPreconditioner(), HomogenisationProblem< ELEMENT >::~HomogenisationProblem(), Eigen::RandomSetter< SparseMatrixType, MapTraits, OuterPacketBits >::~RandomSetter(), TwoLayerInterfaceProblem< ELEMENT >::~TwoLayerInterfaceProblem(), UnstructuredFluidProblem< ELEMENT >::~UnstructuredFluidProblem(), UnstructuredImmersedEllipseProblem< ELEMENT >::~UnstructuredImmersedEllipseProblem(), and VibratingShellProblem< ELEMENT >::~VibratingShellProblem().
1.9.1