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#include <fsi_driven_cavity_mesh.template.h>
Public Member Functions | |
RefineableAlgebraicFSIDrivenCavityMesh (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const double &gap_fraction, GeomObject *wall_pt, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper) | |
void | update_node_update (AlgebraicNode *&node_pt) |
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RefineableQuadMesh () | |
Constructor: Setup static quadtree data. More... | |
RefineableQuadMesh (const RefineableQuadMesh &dummy)=delete | |
Broken copy constructor. More... | |
virtual | ~RefineableQuadMesh () |
Broken assignment operator. More... | |
virtual void | setup_tree_forest () |
void | setup_quadtree_forest () |
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TreeBasedRefineableMesh () | |
Constructor, call the constructor of the base class. More... | |
TreeBasedRefineableMesh (const TreeBasedRefineableMesh &dummy)=delete | |
Broken copy constructor. More... | |
virtual | ~TreeBasedRefineableMesh () |
Empty virtual destructor. More... | |
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TreeBasedRefineableMeshBase () | |
Constructor. More... | |
TreeBasedRefineableMeshBase (const TreeBasedRefineableMeshBase &dummy)=delete | |
Broken copy constructor. More... | |
void | operator= (const TreeBasedRefineableMeshBase &)=delete |
Broken assignment operator. More... | |
virtual | ~TreeBasedRefineableMeshBase () |
Empty Destructor: More... | |
void | adapt (const Vector< double > &elemental_error) |
void | p_adapt (const Vector< double > &elemental_error) |
void | refine_uniformly (DocInfo &doc_info) |
Refine mesh uniformly and doc process. More... | |
void | refine_uniformly () |
Refine mesh uniformly. More... | |
void | p_refine_uniformly (DocInfo &doc_info) |
p-refine mesh uniformly and doc process More... | |
void | p_refine_uniformly () |
p-refine mesh uniformly More... | |
unsigned | unrefine_uniformly () |
void | p_unrefine_uniformly (DocInfo &doc_info) |
p-unrefine mesh uniformly More... | |
TreeForest * | forest_pt () |
Return pointer to the Forest represenation of the mesh. More... | |
void | doc_adaptivity_targets (std::ostream &outfile) |
Doc the targets for mesh adaptation. More... | |
unsigned & | max_refinement_level () |
Access fct for max. permissible refinement level (relative to base mesh) More... | |
unsigned & | min_refinement_level () |
Access fct for min. permissible refinement level (relative to base mesh) More... | |
unsigned & | max_p_refinement_level () |
unsigned & | min_p_refinement_level () |
virtual void | adapt_mesh (DocInfo &doc_info) |
virtual void | adapt_mesh () |
void | p_adapt_mesh (DocInfo &doc_info) |
void | p_adapt_mesh () |
virtual void | refine_selected_elements (const Vector< unsigned > &elements_to_be_refined) |
virtual void | refine_selected_elements (const Vector< RefineableElement * > &elements_to_be_refined) |
void | p_refine_selected_elements (const Vector< unsigned > &elements_to_be_refined) |
p-refine mesh by refining the elements identified by their numbers. More... | |
void | p_refine_selected_elements (const Vector< PRefineableElement * > &elements_to_be_refined_pt) |
p-refine mesh by refining the elements identified by their pointers. More... | |
virtual void | refine_base_mesh_as_in_reference_mesh (TreeBasedRefineableMeshBase *const &ref_mesh_pt) |
Refine to same degree as the reference mesh. More... | |
virtual bool | refine_base_mesh_as_in_reference_mesh_minus_one (TreeBasedRefineableMeshBase *const &ref_mesh_pt) |
virtual void | refine_as_in_reference_mesh (TreeBasedRefineableMeshBase *const &ref_mesh_pt) |
virtual void | get_refinement_levels (unsigned &min_refinement_level, unsigned &max_refinement_level) |
Get max/min refinement levels in mesh. More... | |
virtual void | get_elements_at_refinement_level (unsigned &refinement_level, Vector< RefineableElement * > &level_elements) |
virtual void | get_refinement_pattern (Vector< Vector< unsigned >> &to_be_refined) |
void | refine_base_mesh (Vector< Vector< unsigned >> &to_be_refined) |
Refine base mesh according to specified refinement pattern. More... | |
virtual void | refine (std::ifstream &restart_file) |
Refine mesh according to refinement pattern in restart file. More... | |
virtual void | dump_refinement (std::ostream &outfile) |
Dump refinement pattern to allow for rebuild. More... | |
virtual void | read_refinement (std::ifstream &restart_file, Vector< Vector< unsigned >> &to_be_refined) |
Read refinement pattern to allow for rebuild. More... | |
unsigned | uniform_refinement_level_when_pruned () const |
unsigned & | uniform_refinement_level_when_pruned () |
Level to which the mesh was uniformly refined when it was pruned. More... | |
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bool | adapt_flag () |
RefineableMeshBase () | |
RefineableMeshBase (const RefineableMeshBase &dummy)=delete | |
Broken copy constructor. More... | |
void | operator= (const RefineableMeshBase &)=delete |
Broken assignment operator. More... | |
virtual | ~RefineableMeshBase () |
Empty Destructor: More... | |
unsigned | nrefined () |
Access fct for number of elements that were refined. More... | |
unsigned | nunrefined () |
Access fct for number of elements that were unrefined. More... | |
unsigned & | nrefinement_overruled () |
unsigned & | max_keep_unrefined () |
ErrorEstimator *& | spatial_error_estimator_pt () |
Access to spatial error estimator. More... | |
ErrorEstimator * | spatial_error_estimator_pt () const |
Access to spatial error estimator (const version. More... | |
double & | min_permitted_error () |
double & | max_permitted_error () |
double & | min_error () |
double & | max_error () |
DocInfo *& | doc_info_pt () |
Access fct for pointer to DocInfo. More... | |
void | enable_adaptation () |
Enable adaptation. More... | |
void | disable_adaptation () |
Disable adaptation. More... | |
void | enable_p_adaptation () |
Enable adaptation. More... | |
void | disable_p_adaptation () |
Disable adaptation. More... | |
void | enable_additional_synchronisation_of_hanging_nodes () |
Enable additional synchronisation of hanging nodes. More... | |
void | disable_additional_synchronisation_of_hanging_nodes () |
Disable additional synchronisation of hanging nodes. More... | |
bool | is_adaptation_enabled () const |
Return whether the mesh is to be adapted. More... | |
bool | is_p_adaptation_enabled () const |
Return whether the mesh is to be adapted. More... | |
bool | is_additional_synchronisation_of_hanging_nodes_disabled () const |
Return whether additional synchronisation is enabled. More... | |
DocInfo | doc_info () |
Access fct for DocInfo. More... | |
void | p_unrefine_uniformly (DocInfo &doc_info) |
p-unrefine mesh uniformly More... | |
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Mesh () | |
Default constructor. More... | |
Mesh (const Vector< Mesh * > &sub_mesh_pt) | |
void | merge_meshes (const Vector< Mesh * > &sub_mesh_pt) |
virtual void | reset_boundary_element_info (Vector< unsigned > &ntmp_boundary_elements, Vector< Vector< unsigned >> &ntmp_boundary_elements_in_region, Vector< FiniteElement * > &deleted_elements) |
Virtual function to perform the reset boundary elements info rutines. More... | |
template<class BULK_ELEMENT > | |
void | doc_boundary_coordinates (const unsigned &b, std::ofstream &the_file) |
virtual void | scale_mesh (const double &factor) |
Mesh (const Mesh &dummy)=delete | |
Broken copy constructor. More... | |
void | operator= (const Mesh &)=delete |
Broken assignment operator. More... | |
virtual | ~Mesh () |
Virtual Destructor to clean up all memory. More... | |
void | flush_element_and_node_storage () |
void | flush_element_storage () |
void | flush_node_storage () |
Node *& | node_pt (const unsigned long &n) |
Return pointer to global node n. More... | |
Node * | node_pt (const unsigned long &n) const |
Return pointer to global node n (const version) More... | |
GeneralisedElement *& | element_pt (const unsigned long &e) |
Return pointer to element e. More... | |
GeneralisedElement * | element_pt (const unsigned long &e) const |
Return pointer to element e (const version) More... | |
const Vector< GeneralisedElement * > & | element_pt () const |
Return reference to the Vector of elements. More... | |
Vector< GeneralisedElement * > & | element_pt () |
Return reference to the Vector of elements. More... | |
FiniteElement * | finite_element_pt (const unsigned &e) const |
Node *& | boundary_node_pt (const unsigned &b, const unsigned &n) |
Return pointer to node n on boundary b. More... | |
Node * | boundary_node_pt (const unsigned &b, const unsigned &n) const |
Return pointer to node n on boundary b. More... | |
void | set_nboundary (const unsigned &nbound) |
Set the number of boundaries in the mesh. More... | |
void | remove_boundary_nodes () |
Clear all pointers to boundary nodes. More... | |
void | remove_boundary_nodes (const unsigned &b) |
void | remove_boundary_node (const unsigned &b, Node *const &node_pt) |
Remove a node from the boundary b. More... | |
void | add_boundary_node (const unsigned &b, Node *const &node_pt) |
Add a (pointer to) a node to the b-th boundary. More... | |
void | copy_boundary_node_data_from_nodes () |
bool | boundary_coordinate_exists (const unsigned &i) const |
Indicate whether the i-th boundary has an intrinsic coordinate. More... | |
unsigned long | nelement () const |
Return number of elements in the mesh. More... | |
unsigned long | nnode () const |
Return number of nodes in the mesh. More... | |
unsigned | ndof_types () const |
Return number of dof types in mesh. More... | |
unsigned | elemental_dimension () const |
Return number of elemental dimension in mesh. More... | |
unsigned | nodal_dimension () const |
Return number of nodal dimension in mesh. More... | |
void | add_node_pt (Node *const &node_pt) |
Add a (pointer to a) node to the mesh. More... | |
void | add_element_pt (GeneralisedElement *const &element_pt) |
Add a (pointer to) an element to the mesh. More... | |
virtual void | reorder_nodes (const bool &use_old_ordering=true) |
virtual void | get_node_reordering (Vector< Node * > &reordering, const bool &use_old_ordering=true) const |
template<class BULK_ELEMENT , template< class > class FACE_ELEMENT> | |
void | build_face_mesh (const unsigned &b, Mesh *const &face_mesh_pt) |
unsigned | self_test () |
Self-test: Check elements and nodes. Return 0 for OK. More... | |
void | max_and_min_element_size (double &max_size, double &min_size) |
double | total_size () |
void | check_inverted_elements (bool &mesh_has_inverted_elements, std::ofstream &inverted_element_file) |
void | check_inverted_elements (bool &mesh_has_inverted_elements) |
unsigned | check_for_repeated_nodes (const double &epsilon=1.0e-12) |
Vector< Node * > | prune_dead_nodes () |
unsigned | nboundary () const |
Return number of boundaries. More... | |
unsigned long | nboundary_node (const unsigned &ibound) const |
Return number of nodes on a particular boundary. More... | |
FiniteElement * | boundary_element_pt (const unsigned &b, const unsigned &e) const |
Return pointer to e-th finite element on boundary b. More... | |
Node * | get_some_non_boundary_node () const |
unsigned | nboundary_element (const unsigned &b) const |
Return number of finite elements that are adjacent to boundary b. More... | |
int | face_index_at_boundary (const unsigned &b, const unsigned &e) const |
virtual void | dump (std::ofstream &dump_file, const bool &use_old_ordering=true) const |
Dump the data in the mesh into a file for restart. More... | |
void | dump (const std::string &dump_file_name, const bool &use_old_ordering=true) const |
Dump the data in the mesh into a file for restart. More... | |
virtual void | read (std::ifstream &restart_file) |
Read solution from restart file. More... | |
void | output_paraview (std::ofstream &file_out, const unsigned &nplot) const |
void | output_fct_paraview (std::ofstream &file_out, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const |
void | output_fct_paraview (std::ofstream &file_out, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const |
void | output (std::ostream &outfile) |
Output for all elements. More... | |
void | output (std::ostream &outfile, const unsigned &n_plot) |
Output at f(n_plot) points in each element. More... | |
void | output (FILE *file_pt) |
Output for all elements (C-style output) More... | |
void | output (FILE *file_pt, const unsigned &nplot) |
Output at f(n_plot) points in each element (C-style output) More... | |
void | output (const std::string &output_filename) |
Output for all elements. More... | |
void | output (const std::string &output_filename, const unsigned &n_plot) |
Output at f(n_plot) points in each element. More... | |
void | output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt) |
Output a given Vector function at f(n_plot) points in each element. More... | |
void | output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt) |
void | output_boundaries (std::ostream &outfile) |
Output the nodes on the boundaries (into separate tecplot zones) More... | |
void | output_boundaries (const std::string &output_filename) |
void | assign_initial_values_impulsive () |
Assign initial values for an impulsive start. More... | |
void | shift_time_values () |
void | calculate_predictions () |
void | set_nodal_and_elemental_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data) |
virtual void | set_mesh_level_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data) |
void | set_consistent_pinned_values_for_continuation (ContinuationStorageScheme *const &continuation_stepper_pt) |
Set consistent values for pinned data in continuation. More... | |
bool | does_pointer_correspond_to_mesh_data (double *const ¶meter_pt) |
Does the double pointer correspond to any mesh data. More... | |
void | set_nodal_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data) |
Set the timestepper associated with the nodal data in the mesh. More... | |
void | set_elemental_internal_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data) |
virtual void | compute_norm (double &norm) |
virtual void | compute_norm (Vector< double > &norm) |
virtual void | compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm) |
virtual void | compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm) |
virtual void | compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm) |
virtual void | compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm) |
virtual void | compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm) |
virtual void | compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm) |
virtual void | compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm) |
Returns the norm of the error and that of the exact solution. More... | |
virtual void | compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm) |
bool | is_mesh_distributed () const |
Boolean to indicate if Mesh has been distributed. More... | |
OomphCommunicator * | communicator_pt () const |
void | delete_all_external_storage () |
Wipe the storage for all externally-based elements. More... | |
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QuadMeshBase () | |
Constructor (empty) More... | |
QuadMeshBase (const QuadMeshBase &node)=delete | |
Broken copy constructor. More... | |
void | operator= (const QuadMeshBase &)=delete |
Broken assignment operator. More... | |
virtual | ~QuadMeshBase () |
Destructor (empty) More... | |
void | setup_boundary_element_info () |
void | setup_boundary_element_info (std::ostream &outfile) |
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AlgebraicFSIDrivenCavityMesh (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const double &gap_fraction, GeomObject *wall_pt, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper) | |
virtual | ~AlgebraicFSIDrivenCavityMesh () |
Destructor: empty. More... | |
void | algebraic_node_update (const unsigned &t, AlgebraicNode *&node_pt) |
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FSIDrivenCavityMesh (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const double &gap_fraction, GeomObject *wall_pt, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper) | |
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SimpleRectangularQuadMesh (const unsigned &Nx, const unsigned &Ny, const double &Lx, const double &Ly, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper) | |
const unsigned & | nx () const |
Access function for number of elements in x directions. More... | |
const unsigned & | ny () const |
Access function for number of elements in y directions. More... | |
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AlgebraicMesh () | |
AlgebraicMesh (const AlgebraicMesh &)=delete | |
Broken copy constructor. More... | |
~AlgebraicMesh () | |
Broken assignment operator. More... | |
AlgebraicNode * | node_pt (const unsigned long &n) |
Return a pointer to the n-th global AlgebraicNode. More... | |
void | node_update (const bool &update_all_solid_nodes=false) |
unsigned | self_test () |
Self test: check consistentency of multiple node updates. More... | |
void | add_geom_object_list_pt (GeomObject *geom_object_pt) |
unsigned | ngeom_object_list_pt () |
Return number of geometric objects associated with AlgebraicMesh. More... | |
GeomObject * | geom_object_list_pt (const unsigned &i) |
Access function to the ith GeomObject. More... | |
Additional Inherited Members | |
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typedef void(FiniteElement::* | SteadyExactSolutionFctPt) (const Vector< double > &x, Vector< double > &soln) |
typedef void(FiniteElement::* | UnsteadyExactSolutionFctPt) (const double &time, const Vector< double > &x, Vector< double > &soln) |
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static Steady< 0 > | Default_TimeStepper |
The Steady Timestepper. More... | |
static bool | Suppress_warning_about_empty_mesh_level_time_stepper_function |
Static boolean flag to control warning about mesh level timesteppers. More... | |
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void | complete_hanging_nodes (const int &ncont_interpolated_values) |
Complete the hanging node scheme recursively. More... | |
void | complete_hanging_nodes_recursively (Node *&nod_pt, Vector< Node * > &master_nodes, Vector< double > &hang_weights, const int &ival) |
Auxiliary routine for recursive hanging node completion. More... | |
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unsigned long | assign_global_eqn_numbers (Vector< double * > &Dof_pt) |
Assign (global) equation numbers to the nodes. More... | |
void | describe_dofs (std::ostream &out, const std::string ¤t_string) const |
void | describe_local_dofs (std::ostream &out, const std::string ¤t_string) const |
void | assign_local_eqn_numbers (const bool &store_local_dof_pt) |
Assign local equation numbers in all elements. More... | |
void | convert_to_boundary_node (Node *&node_pt, const Vector< FiniteElement * > &finite_element_pt) |
void | convert_to_boundary_node (Node *&node_pt) |
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void | setup_algebraic_node_update () |
Function to setup the algebraic node update. More... | |
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unsigned | Uniform_refinement_level_when_pruned |
Level to which the mesh was uniformly refined when it was pruned. More... | |
unsigned | Max_refinement_level |
Max. permissible refinement level (relative to base mesh) More... | |
unsigned | Min_refinement_level |
Min. permissible refinement level (relative to base mesh) More... | |
unsigned | Max_p_refinement_level |
Max. permissible p-refinement level (relative to base mesh) More... | |
unsigned | Min_p_refinement_level |
Min. permissible p-refinement level (relative to base mesh) More... | |
TreeForest * | Forest_pt |
Forest representation of the mesh. More... | |
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ErrorEstimator * | Spatial_error_estimator_pt |
Pointer to spatial error estimator. More... | |
double | Max_permitted_error |
Max. error (i.e. split elements if their error is larger) More... | |
double | Min_permitted_error |
Min. error (i.e. (try to) merge elements if their error is smaller) More... | |
double | Min_error |
Min.actual error. More... | |
double | Max_error |
Max. actual error. More... | |
unsigned | Nrefined |
Stats: Number of elements that were refined. More... | |
unsigned | Nunrefined |
Stats: Number of elements that were unrefined. More... | |
bool | Adapt_flag |
Flag that requests adaptation. More... | |
bool | P_adapt_flag |
Flag that requests p-adaptation. More... | |
bool | Additional_synchronisation_of_hanging_nodes_not_required |
Flag that disables additional synchronisation of hanging nodes. More... | |
DocInfo * | Doc_info_pt |
Pointer to DocInfo. More... | |
unsigned | Max_keep_unrefined |
unsigned | Nrefinement_overruled |
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Vector< Vector< Node * > > | Boundary_node_pt |
bool | Lookup_for_elements_next_boundary_is_setup |
Vector< Vector< FiniteElement * > > | Boundary_element_pt |
Vector< Vector< int > > | Face_index_at_boundary |
Vector< Node * > | Node_pt |
Vector of pointers to nodes. More... | |
Vector< GeneralisedElement * > | Element_pt |
Vector of pointers to generalised elements. More... | |
std::vector< bool > | Boundary_coordinate_exists |
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unsigned | Nx |
Number of elements in x direction. More... | |
unsigned | Ny |
Number of elements in y direction. More... | |
double | Gap_fraction |
GeomObject * | Wall_pt |
Pointer to geometric object that represents the moving wall. More... | |
//////////////////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////////////////// Refineable version algebraic FSIDrivenCavityMesh.
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inline |
Constructor: Pass number of elements, lengths, pointer to GeomObject that defines the collapsible segment and pointer to TimeStepper (defaults to the default timestepper, Steady).
References oomph::RefineableQuadMesh< ELEMENT >::setup_quadtree_forest().
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virtual |
Update the node update data for specified node following any mesh adapation
///////////////////////////////////////////////////////////////// ///////////////////////////////////////////////////////////////// ///////////////////////////////////////////////////////////////// Update the geometric references that are used to update node after mesh adaptation.
Reimplemented from oomph::AlgebraicFSIDrivenCavityMesh< ELEMENT >.
References oomph::AlgebraicNode::add_node_update_info(), oomph::AlgebraicNode::kill_node_update_info(), oomph::GeomObject::locate_zeta(), s, oomph::AlgebraicNode::vector_geom_object_pt(), oomph::AlgebraicNode::vector_ref_value(), and Eigen::zeta().