WallMesh< ELEMENT > Class Template Reference
+ Inheritance diagram for WallMesh< ELEMENT >:

Public Member Functions

 WallMesh (const double &r_min, const double &r_max, const double &lz, const int &nr, const int &nphi, const int &nz, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 Constructor: More...
 
virtual ~WallMesh ()
 Empty Destructor. More...
 
double min_deformation ()
 
double max_deformation ()
 
 WallMesh (const double &r_min, const double &r_max, const double &lz, const int &nr, const int &nphi, const int &nz, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 Constructor: More...
 
virtual ~WallMesh ()
 Empty Destructor. More...
 
double min_deformation ()
 
double max_deformation ()
 
 WallMesh (const double &r_min, const double &r_max, const double &lz, const int &nr, const int &nphi, const int &nz, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 Constructor: More...
 
virtual ~WallMesh ()
 Empty Destructor. More...
 
double min_deformation ()
 
double max_deformation ()
 
- Public Member Functions inherited from oomph::RefineableSimpleCubicMesh< ELEMENT >
 RefineableSimpleCubicMesh (const unsigned &nx, const unsigned &ny, const unsigned &nz, const double &lx, const double &ly, const double &lz, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
 RefineableSimpleCubicMesh (const unsigned &nx, const unsigned &ny, const unsigned &nz, const double &xmin, const double &xmax, const double &ymin, const double &ymax, const double &zmin, const double &zmax, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
- Public Member Functions inherited from oomph::SimpleCubicMesh< ELEMENT >
 SimpleCubicMesh (const unsigned &nx, const unsigned &ny, const unsigned &nz, const double &lx, const double &ly, const double &lz, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
 SimpleCubicMesh (const unsigned &nx, const unsigned &ny, const unsigned &nz, const double &xmin, const double &xmax, const double &ymin, const double &ymax, const double &zmin, const double &zmax, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
const unsignednx () const
 Access function for number of elements in x directions. More...
 
const unsignedny () const
 Access function for number of elements in y directions. More...
 
const unsignednz () const
 Access function for number of elements in y directions. More...
 
- Public Member Functions inherited from oomph::BrickMeshBase
 BrickMeshBase ()
 Constructor (empty) More...
 
 BrickMeshBase (const BrickMeshBase &)=delete
 Broken copy constructor. More...
 
virtual ~BrickMeshBase ()
 Broken assignment operator. More...
 
void setup_boundary_element_info ()
 
void setup_boundary_element_info (std::ostream &outfile)
 
- Public Member Functions inherited from oomph::Mesh
 Mesh ()
 Default constructor. More...
 
 Mesh (const Vector< Mesh * > &sub_mesh_pt)
 
void merge_meshes (const Vector< Mesh * > &sub_mesh_pt)
 
virtual void reset_boundary_element_info (Vector< unsigned > &ntmp_boundary_elements, Vector< Vector< unsigned >> &ntmp_boundary_elements_in_region, Vector< FiniteElement * > &deleted_elements)
 Virtual function to perform the reset boundary elements info rutines. More...
 
template<class BULK_ELEMENT >
void doc_boundary_coordinates (const unsigned &b, std::ofstream &the_file)
 
 Mesh (const Mesh &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const Mesh &)=delete
 Broken assignment operator. More...
 
virtual ~Mesh ()
 Virtual Destructor to clean up all memory. More...
 
void flush_element_and_node_storage ()
 
void flush_element_storage ()
 
void flush_node_storage ()
 
Node *& node_pt (const unsigned long &n)
 Return pointer to global node n. More...
 
Nodenode_pt (const unsigned long &n) const
 Return pointer to global node n (const version) More...
 
GeneralisedElement *& element_pt (const unsigned long &e)
 Return pointer to element e. More...
 
GeneralisedElementelement_pt (const unsigned long &e) const
 Return pointer to element e (const version) More...
 
const Vector< GeneralisedElement * > & element_pt () const
 Return reference to the Vector of elements. More...
 
Vector< GeneralisedElement * > & element_pt ()
 Return reference to the Vector of elements. More...
 
FiniteElementfinite_element_pt (const unsigned &e) const
 
Node *& boundary_node_pt (const unsigned &b, const unsigned &n)
 Return pointer to node n on boundary b. More...
 
Nodeboundary_node_pt (const unsigned &b, const unsigned &n) const
 Return pointer to node n on boundary b. More...
 
void set_nboundary (const unsigned &nbound)
 Set the number of boundaries in the mesh. More...
 
void remove_boundary_nodes ()
 Clear all pointers to boundary nodes. More...
 
void remove_boundary_nodes (const unsigned &b)
 
void remove_boundary_node (const unsigned &b, Node *const &node_pt)
 Remove a node from the boundary b. More...
 
void add_boundary_node (const unsigned &b, Node *const &node_pt)
 Add a (pointer to) a node to the b-th boundary. More...
 
void copy_boundary_node_data_from_nodes ()
 
bool boundary_coordinate_exists (const unsigned &i) const
 Indicate whether the i-th boundary has an intrinsic coordinate. More...
 
unsigned long nelement () const
 Return number of elements in the mesh. More...
 
unsigned long nnode () const
 Return number of nodes in the mesh. More...
 
unsigned ndof_types () const
 Return number of dof types in mesh. More...
 
unsigned elemental_dimension () const
 Return number of elemental dimension in mesh. More...
 
unsigned nodal_dimension () const
 Return number of nodal dimension in mesh. More...
 
void add_node_pt (Node *const &node_pt)
 Add a (pointer to a) node to the mesh. More...
 
void add_element_pt (GeneralisedElement *const &element_pt)
 Add a (pointer to) an element to the mesh. More...
 
virtual void node_update (const bool &update_all_solid_nodes=false)
 
virtual void reorder_nodes (const bool &use_old_ordering=true)
 
virtual void get_node_reordering (Vector< Node * > &reordering, const bool &use_old_ordering=true) const
 
template<class BULK_ELEMENT , template< class > class FACE_ELEMENT>
void build_face_mesh (const unsigned &b, Mesh *const &face_mesh_pt)
 
unsigned self_test ()
 Self-test: Check elements and nodes. Return 0 for OK. More...
 
void max_and_min_element_size (double &max_size, double &min_size)
 
double total_size ()
 
void check_inverted_elements (bool &mesh_has_inverted_elements, std::ofstream &inverted_element_file)
 
void check_inverted_elements (bool &mesh_has_inverted_elements)
 
unsigned check_for_repeated_nodes (const double &epsilon=1.0e-12)
 
Vector< Node * > prune_dead_nodes ()
 
unsigned nboundary () const
 Return number of boundaries. More...
 
unsigned long nboundary_node (const unsigned &ibound) const
 Return number of nodes on a particular boundary. More...
 
FiniteElementboundary_element_pt (const unsigned &b, const unsigned &e) const
 Return pointer to e-th finite element on boundary b. More...
 
Nodeget_some_non_boundary_node () const
 
unsigned nboundary_element (const unsigned &b) const
 Return number of finite elements that are adjacent to boundary b. More...
 
int face_index_at_boundary (const unsigned &b, const unsigned &e) const
 
virtual void dump (std::ofstream &dump_file, const bool &use_old_ordering=true) const
 Dump the data in the mesh into a file for restart. More...
 
void dump (const std::string &dump_file_name, const bool &use_old_ordering=true) const
 Dump the data in the mesh into a file for restart. More...
 
virtual void read (std::ifstream &restart_file)
 Read solution from restart file. More...
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
void output_fct_paraview (std::ofstream &file_out, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
void output_fct_paraview (std::ofstream &file_out, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
void output (std::ostream &outfile)
 Output for all elements. More...
 
void output (std::ostream &outfile, const unsigned &n_plot)
 Output at f(n_plot) points in each element. More...
 
void output (FILE *file_pt)
 Output for all elements (C-style output) More...
 
void output (FILE *file_pt, const unsigned &nplot)
 Output at f(n_plot) points in each element (C-style output) More...
 
void output (const std::string &output_filename)
 Output for all elements. More...
 
void output (const std::string &output_filename, const unsigned &n_plot)
 Output at f(n_plot) points in each element. More...
 
void output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt)
 Output a given Vector function at f(n_plot) points in each element. More...
 
void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt)
 
void output_boundaries (std::ostream &outfile)
 Output the nodes on the boundaries (into separate tecplot zones) More...
 
void output_boundaries (const std::string &output_filename)
 
void assign_initial_values_impulsive ()
 Assign initial values for an impulsive start. More...
 
void shift_time_values ()
 
void calculate_predictions ()
 
void set_nodal_and_elemental_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
virtual void set_mesh_level_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void set_consistent_pinned_values_for_continuation (ContinuationStorageScheme *const &continuation_stepper_pt)
 Set consistent values for pinned data in continuation. More...
 
bool does_pointer_correspond_to_mesh_data (double *const &parameter_pt)
 Does the double pointer correspond to any mesh data. More...
 
void set_nodal_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 Set the timestepper associated with the nodal data in the mesh. More...
 
void set_elemental_internal_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
virtual void compute_norm (double &norm)
 
virtual void compute_norm (Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Returns the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
bool is_mesh_distributed () const
 Boolean to indicate if Mesh has been distributed. More...
 
OomphCommunicatorcommunicator_pt () const
 
void delete_all_external_storage ()
 Wipe the storage for all externally-based elements. More...
 
- Public Member Functions inherited from oomph::RefineableBrickMesh< ELEMENT >
 RefineableBrickMesh ()
 Constructor: Setup static octree data. More...
 
 RefineableBrickMesh (const RefineableBrickMesh &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableBrickMesh &)=delete
 Broken assignment operator. More...
 
virtual ~RefineableBrickMesh ()
 Destructor: More...
 
virtual void setup_tree_forest ()
 
void setup_octree_forest ()
 Do what it says... More...
 
- Public Member Functions inherited from oomph::TreeBasedRefineableMesh< ELEMENT >
 TreeBasedRefineableMesh ()
 Constructor, call the constructor of the base class. More...
 
 TreeBasedRefineableMesh (const TreeBasedRefineableMesh &dummy)=delete
 Broken copy constructor. More...
 
virtual ~TreeBasedRefineableMesh ()
 Empty virtual destructor. More...
 
- Public Member Functions inherited from oomph::TreeBasedRefineableMeshBase
 TreeBasedRefineableMeshBase ()
 Constructor. More...
 
 TreeBasedRefineableMeshBase (const TreeBasedRefineableMeshBase &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const TreeBasedRefineableMeshBase &)=delete
 Broken assignment operator. More...
 
virtual ~TreeBasedRefineableMeshBase ()
 Empty Destructor: More...
 
void adapt (const Vector< double > &elemental_error)
 
void p_adapt (const Vector< double > &elemental_error)
 
void refine_uniformly (DocInfo &doc_info)
 Refine mesh uniformly and doc process. More...
 
void refine_uniformly ()
 Refine mesh uniformly. More...
 
void p_refine_uniformly (DocInfo &doc_info)
 p-refine mesh uniformly and doc process More...
 
void p_refine_uniformly ()
 p-refine mesh uniformly More...
 
unsigned unrefine_uniformly ()
 
void p_unrefine_uniformly (DocInfo &doc_info)
 p-unrefine mesh uniformly More...
 
TreeForestforest_pt ()
 Return pointer to the Forest represenation of the mesh. More...
 
void doc_adaptivity_targets (std::ostream &outfile)
 Doc the targets for mesh adaptation. More...
 
unsignedmax_refinement_level ()
 Access fct for max. permissible refinement level (relative to base mesh) More...
 
unsignedmin_refinement_level ()
 Access fct for min. permissible refinement level (relative to base mesh) More...
 
unsignedmax_p_refinement_level ()
 
unsignedmin_p_refinement_level ()
 
virtual void adapt_mesh (DocInfo &doc_info)
 
virtual void adapt_mesh ()
 
void p_adapt_mesh (DocInfo &doc_info)
 
void p_adapt_mesh ()
 
virtual void refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
virtual void refine_selected_elements (const Vector< RefineableElement * > &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 p-refine mesh by refining the elements identified by their numbers. More...
 
void p_refine_selected_elements (const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 p-refine mesh by refining the elements identified by their pointers. More...
 
virtual void refine_base_mesh_as_in_reference_mesh (TreeBasedRefineableMeshBase *const &ref_mesh_pt)
 Refine to same degree as the reference mesh. More...
 
virtual bool refine_base_mesh_as_in_reference_mesh_minus_one (TreeBasedRefineableMeshBase *const &ref_mesh_pt)
 
virtual void refine_as_in_reference_mesh (TreeBasedRefineableMeshBase *const &ref_mesh_pt)
 
virtual void get_refinement_levels (unsigned &min_refinement_level, unsigned &max_refinement_level)
 Get max/min refinement levels in mesh. More...
 
virtual void get_elements_at_refinement_level (unsigned &refinement_level, Vector< RefineableElement * > &level_elements)
 
virtual void get_refinement_pattern (Vector< Vector< unsigned >> &to_be_refined)
 
void refine_base_mesh (Vector< Vector< unsigned >> &to_be_refined)
 Refine base mesh according to specified refinement pattern. More...
 
virtual void refine (std::ifstream &restart_file)
 Refine mesh according to refinement pattern in restart file. More...
 
virtual void dump_refinement (std::ostream &outfile)
 Dump refinement pattern to allow for rebuild. More...
 
virtual void read_refinement (std::ifstream &restart_file, Vector< Vector< unsigned >> &to_be_refined)
 Read refinement pattern to allow for rebuild. More...
 
unsigned uniform_refinement_level_when_pruned () const
 
unsigneduniform_refinement_level_when_pruned ()
 Level to which the mesh was uniformly refined when it was pruned. More...
 
- Public Member Functions inherited from oomph::RefineableMeshBase
bool adapt_flag ()
 
 RefineableMeshBase ()
 
 RefineableMeshBase (const RefineableMeshBase &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableMeshBase &)=delete
 Broken assignment operator. More...
 
virtual ~RefineableMeshBase ()
 Empty Destructor: More...
 
unsigned nrefined ()
 Access fct for number of elements that were refined. More...
 
unsigned nunrefined ()
 Access fct for number of elements that were unrefined. More...
 
unsignednrefinement_overruled ()
 
unsignedmax_keep_unrefined ()
 
ErrorEstimator *& spatial_error_estimator_pt ()
 Access to spatial error estimator. More...
 
ErrorEstimatorspatial_error_estimator_pt () const
 Access to spatial error estimator (const version. More...
 
doublemin_permitted_error ()
 
doublemax_permitted_error ()
 
doublemin_error ()
 
doublemax_error ()
 
DocInfo *& doc_info_pt ()
 Access fct for pointer to DocInfo. More...
 
void enable_adaptation ()
 Enable adaptation. More...
 
void disable_adaptation ()
 Disable adaptation. More...
 
void enable_p_adaptation ()
 Enable adaptation. More...
 
void disable_p_adaptation ()
 Disable adaptation. More...
 
void enable_additional_synchronisation_of_hanging_nodes ()
 Enable additional synchronisation of hanging nodes. More...
 
void disable_additional_synchronisation_of_hanging_nodes ()
 Disable additional synchronisation of hanging nodes. More...
 
bool is_adaptation_enabled () const
 Return whether the mesh is to be adapted. More...
 
bool is_p_adaptation_enabled () const
 Return whether the mesh is to be adapted. More...
 
bool is_additional_synchronisation_of_hanging_nodes_disabled () const
 Return whether additional synchronisation is enabled. More...
 
DocInfo doc_info ()
 Access fct for DocInfo. More...
 
void p_unrefine_uniformly (DocInfo &doc_info)
 p-unrefine mesh uniformly More...
 
- Public Member Functions inherited from oomph::SolidMesh
 SolidMesh ()
 Default constructor. More...
 
 SolidMesh (const SolidMesh &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const SolidMesh &)=delete
 Broken assignment operator. More...
 
 SolidMesh (const Vector< SolidMesh * > &sub_mesh_pt)
 
SolidNodenode_pt (const unsigned long &n)
 Return a pointer to the n-th global SolidNode. More...
 
SolidNodeboundary_node_pt (const unsigned &b, const unsigned &n)
 Return n-th SolidNodes on b-th boundary. More...
 
SolidNodeelement_node_pt (const unsigned long &e, const unsigned &n)
 
void set_lagrangian_nodal_coordinates ()
 
void scale_mesh (const double &factor)
 

Additional Inherited Members

- Public Types inherited from oomph::Mesh
typedef void(FiniteElement::* SteadyExactSolutionFctPt) (const Vector< double > &x, Vector< double > &soln)
 
typedef void(FiniteElement::* UnsteadyExactSolutionFctPt) (const double &time, const Vector< double > &x, Vector< double > &soln)
 
- Static Public Attributes inherited from oomph::Mesh
static Steady< 0 > Default_TimeStepper
 The Steady Timestepper. More...
 
static bool Suppress_warning_about_empty_mesh_level_time_stepper_function
 Static boolean flag to control warning about mesh level timesteppers. More...
 
- Static Public Attributes inherited from oomph::SolidMesh
static SolidICProblem Solid_IC_problem
 
- Protected Member Functions inherited from oomph::SimpleCubicMesh< ELEMENT >
void build_mesh (TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 Generic mesh construction function: contains all the hard work. More...
 
- Protected Member Functions inherited from oomph::Mesh
unsigned long assign_global_eqn_numbers (Vector< double * > &Dof_pt)
 Assign (global) equation numbers to the nodes. More...
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void describe_local_dofs (std::ostream &out, const std::string &current_string) const
 
void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 Assign local equation numbers in all elements. More...
 
void convert_to_boundary_node (Node *&node_pt, const Vector< FiniteElement * > &finite_element_pt)
 
void convert_to_boundary_node (Node *&node_pt)
 
- Protected Member Functions inherited from oomph::TreeBasedRefineableMeshBase
void complete_hanging_nodes (const int &ncont_interpolated_values)
 Complete the hanging node scheme recursively. More...
 
void complete_hanging_nodes_recursively (Node *&nod_pt, Vector< Node * > &master_nodes, Vector< double > &hang_weights, const int &ival)
 Auxiliary routine for recursive hanging node completion. More...
 
- Protected Attributes inherited from oomph::SimpleCubicMesh< ELEMENT >
unsigned Nx
 Number of elements in x direction. More...
 
unsigned Ny
 Number of elements in y direction. More...
 
unsigned Nz
 Number of elements in y direction. More...
 
double Xmin
 Minimum value of x coordinate. More...
 
double Xmax
 Maximum value of x coordinate. More...
 
double Ymin
 Minimum value of y coordinate. More...
 
double Ymax
 Minimum value of y coordinate. More...
 
double Zmin
 Minimum value of z coordinate. More...
 
double Zmax
 Maximum value of z coordinate. More...
 
- Protected Attributes inherited from oomph::Mesh
Vector< Vector< Node * > > Boundary_node_pt
 
bool Lookup_for_elements_next_boundary_is_setup
 
Vector< Vector< FiniteElement * > > Boundary_element_pt
 
Vector< Vector< int > > Face_index_at_boundary
 
Vector< Node * > Node_pt
 Vector of pointers to nodes. More...
 
Vector< GeneralisedElement * > Element_pt
 Vector of pointers to generalised elements. More...
 
std::vector< boolBoundary_coordinate_exists
 
- Protected Attributes inherited from oomph::TreeBasedRefineableMeshBase
unsigned Uniform_refinement_level_when_pruned
 Level to which the mesh was uniformly refined when it was pruned. More...
 
unsigned Max_refinement_level
 Max. permissible refinement level (relative to base mesh) More...
 
unsigned Min_refinement_level
 Min. permissible refinement level (relative to base mesh) More...
 
unsigned Max_p_refinement_level
 Max. permissible p-refinement level (relative to base mesh) More...
 
unsigned Min_p_refinement_level
 Min. permissible p-refinement level (relative to base mesh) More...
 
TreeForestForest_pt
 Forest representation of the mesh. More...
 
- Protected Attributes inherited from oomph::RefineableMeshBase
ErrorEstimatorSpatial_error_estimator_pt
 Pointer to spatial error estimator. More...
 
double Max_permitted_error
 Max. error (i.e. split elements if their error is larger) More...
 
double Min_permitted_error
 Min. error (i.e. (try to) merge elements if their error is smaller) More...
 
double Min_error
 Min.actual error. More...
 
double Max_error
 Max. actual error. More...
 
unsigned Nrefined
 Stats: Number of elements that were refined. More...
 
unsigned Nunrefined
 Stats: Number of elements that were unrefined. More...
 
bool Adapt_flag
 Flag that requests adaptation. More...
 
bool P_adapt_flag
 Flag that requests p-adaptation. More...
 
bool Additional_synchronisation_of_hanging_nodes_not_required
 Flag that disables additional synchronisation of hanging nodes. More...
 
DocInfoDoc_info_pt
 Pointer to DocInfo. More...
 
unsigned Max_keep_unrefined
 
unsigned Nrefinement_overruled
 

Detailed Description

template<class ELEMENT>
class WallMesh< ELEMENT >

///////////////////////////////////////////////////////////////////////// ///////////////////////////////////////////////////////////////////////// /////////////////////////////////////////////////////////////////////////

Constructor & Destructor Documentation

◆ WallMesh() [1/3]

template<class ELEMENT >
WallMesh< ELEMENT >::WallMesh ( const double r_min,
const double r_max,
const double lz,
const int nr,
const int nphi,
const int nz,
TimeStepper time_stepper_pt = &Mesh::Default_TimeStepper 
)
inline

Constructor:

211  : SimpleCubicMesh<ELEMENT>(nr,nphi,nz,1.0,1.0,lz,time_stepper_pt),
212  RefineableSimpleCubicMesh<ELEMENT>(nr,nphi,nz,1.0,1.0,lz,time_stepper_pt)
213  {
214 
215  // hierher: Important: Currently wall mesh will not refine
216  // towards cylindrical geometry! Need Domain!
217 
218  // move the nodes
219 
220  // Find out how many nodes there are
221  unsigned n_node=nnode();
222 
223  // Calculate the value of pi
224  const double pi = MathematicalConstants::Pi;
225 
226  // Loop over all nodes
227  for (unsigned n=0;n<n_node;n++)
228  {
229  // Pointer to node
230  Node* nod_pt=node_pt(n);
231 
232  // Get the x/y coordinates
233  double x_old=nod_pt->x(0);
234  double y_old=nod_pt->x(1);
235 
236  // Map from the old x/y to the new r/phi:
237  double r=r_min+(r_max-r_min)*x_old;
238  double phi=(pi/2.0)*(y_old);
239 
240  // Set new nodal coordinates
241  nod_pt->x(0)=r*cos(phi);
242  nod_pt->x(1)=r*sin(phi);
243 
244  // set boundary coordinates
245  if (nod_pt->is_on_boundary(4))
246  {
247  Vector<double> zeta(2);
248  zeta[0]=nod_pt->x(2);
249  zeta[1]=phi;
251  }
252  }
253  this->Boundary_coordinate_exists[4]=true;
255  }
AnnoyingScalar cos(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:136
AnnoyingScalar sin(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:137
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
std::vector< bool > Boundary_coordinate_exists
Definition: mesh.h:190
unsigned long nnode() const
Return number of nodes in the mesh.
Definition: mesh.h:596
Definition: nodes.h:906
double & x(const unsigned &i)
Return the i-th nodal coordinate.
Definition: nodes.h:1060
virtual bool is_on_boundary() const
Definition: nodes.h:1373
virtual void set_coordinates_on_boundary(const unsigned &b, const unsigned &k, const Vector< double > &boundary_zeta)
Definition: nodes.cc:2394
Refineable version of simple cubic 3D Brick mesh class.
Definition: simple_cubic_mesh.template.h:169
Simple cubic 3D Brick mesh class.
Definition: simple_cubic_mesh.template.h:47
const unsigned & nz() const
Access function for number of elements in y directions.
Definition: simple_cubic_mesh.template.h:120
SolidNode * node_pt(const unsigned long &n)
Return a pointer to the n-th global SolidNode.
Definition: mesh.h:2594
void set_lagrangian_nodal_coordinates()
Definition: mesh.cc:9564
double r_min
Definition: two_d_biharmonic.cc:237
double r_max
Definition: two_d_biharmonic.cc:238
double Pi
Definition: two_d_biharmonic.cc:235
EIGEN_STRONG_INLINE const Eigen::CwiseBinaryOp< Eigen::internal::scalar_zeta_op< typename DerivedX::Scalar >, const DerivedX, const DerivedQ > zeta(const Eigen::ArrayBase< DerivedX > &x, const Eigen::ArrayBase< DerivedQ > &q)
Definition: SpecialFunctionsArrayAPI.h:152
const double lz
Definition: ConstraintElementsUnitTest.cpp:35
r
Definition: UniformPSDSelfTest.py:20
const Mdouble pi
Definition: ExtendedMath.h:23

References cos(), oomph::Node::is_on_boundary(), n, constants::pi, BiharmonicTestFunctions2::Pi, UniformPSDSelfTest::r, BiharmonicTestFunctions2::r_max, BiharmonicTestFunctions2::r_min, oomph::Node::set_coordinates_on_boundary(), sin(), oomph::Node::x(), and Eigen::zeta().

◆ ~WallMesh() [1/3]

template<class ELEMENT >
virtual WallMesh< ELEMENT >::~WallMesh ( )
inlinevirtual

Empty Destructor.

258 { }

◆ WallMesh() [2/3]

template<class ELEMENT >
WallMesh< ELEMENT >::WallMesh ( const double r_min,
const double r_max,
const double lz,
const int nr,
const int nphi,
const int nz,
TimeStepper time_stepper_pt = &Mesh::Default_TimeStepper 
)
inline

Constructor:

211  : SimpleCubicMesh<ELEMENT>(nr,nphi,nz,1.0,1.0,lz,time_stepper_pt),
212  RefineableSimpleCubicMesh<ELEMENT>(nr,nphi,nz,1.0,1.0,lz,time_stepper_pt)
213  {
214 
215  // hierher: Important: Currently wall mesh will not refine
216  // towards cylindrical geometry! Need Domain!
217 
218  // move the nodes
219 
220  // Find out how many nodes there are
221  unsigned n_node=nnode();
222 
223  // Calculate the value of pi
224  const double pi = MathematicalConstants::Pi;
225 
226  // Loop over all nodes
227  for (unsigned n=0;n<n_node;n++)
228  {
229  // Pointer to node
230  Node* nod_pt=node_pt(n);
231 
232  // Get the x/y coordinates
233  double x_old=nod_pt->x(0);
234  double y_old=nod_pt->x(1);
235 
236  // Map from the old x/y to the new r/phi:
237  double r=r_min+(r_max-r_min)*x_old;
238  double phi=(pi/2.0)*(y_old);
239 
240  // Set new nodal coordinates
241  nod_pt->x(0)=r*cos(phi);
242  nod_pt->x(1)=r*sin(phi);
243 
244  // set boundary coordinates
245  if (nod_pt->is_on_boundary(4))
246  {
247  Vector<double> zeta(2);
248  zeta[0]=nod_pt->x(2);
249  zeta[1]=phi;
251  }
252  }
253  this->Boundary_coordinate_exists[4]=true;
255  }

References cos(), oomph::Node::is_on_boundary(), n, constants::pi, BiharmonicTestFunctions2::Pi, UniformPSDSelfTest::r, BiharmonicTestFunctions2::r_max, BiharmonicTestFunctions2::r_min, oomph::Node::set_coordinates_on_boundary(), sin(), oomph::Node::x(), and Eigen::zeta().

◆ ~WallMesh() [2/3]

template<class ELEMENT >
virtual WallMesh< ELEMENT >::~WallMesh ( )
inlinevirtual

Empty Destructor.

258 { }

◆ WallMesh() [3/3]

template<class ELEMENT >
WallMesh< ELEMENT >::WallMesh ( const double r_min,
const double r_max,
const double lz,
const int nr,
const int nphi,
const int nz,
TimeStepper time_stepper_pt = &Mesh::Default_TimeStepper 
)
inline

Constructor:

217  : SimpleCubicMesh<ELEMENT>(nr,nphi,nz,1.0,1.0,lz,time_stepper_pt),
218  RefineableSimpleCubicMesh<ELEMENT>(nr,nphi,nz,1.0,1.0,lz,time_stepper_pt)
219  {
220 
221  // Important: Currently wall mesh will not refine
222  // towards cylindrical geometry! Need Domain!
223 
224  // move the nodes
225 
226  // Find out how many nodes there are
227  unsigned n_node=nnode();
228 
229  // Calculate the value of pi
230  const double pi = MathematicalConstants::Pi;
231 
232  // Loop over all nodes
233  for (unsigned n=0;n<n_node;n++)
234  {
235  // Pointer to node
236  Node* nod_pt=node_pt(n);
237 
238  // Get the x/y coordinates
239  double x_old=nod_pt->x(0);
240  double y_old=nod_pt->x(1);
241 
242  // Map from the old x/y to the new r/phi:
243  double r=r_min+(r_max-r_min)*x_old;
244  double phi=(pi/2.0)*(y_old);
245 
246  // Set new nodal coordinates
247  nod_pt->x(0)=r*cos(phi);
248  nod_pt->x(1)=r*sin(phi);
249 
250  // set boundary coordinates
251  if (nod_pt->is_on_boundary(4))
252  {
253  Vector<double> zeta(2);
254  zeta[0]=nod_pt->x(2);
255  zeta[1]=phi;
257  }
258  }
259  this->Boundary_coordinate_exists[4]=true;
261  }

References cos(), oomph::Node::is_on_boundary(), n, constants::pi, BiharmonicTestFunctions2::Pi, UniformPSDSelfTest::r, BiharmonicTestFunctions2::r_max, BiharmonicTestFunctions2::r_min, oomph::Node::set_coordinates_on_boundary(), sin(), oomph::Node::x(), and Eigen::zeta().

◆ ~WallMesh() [3/3]

template<class ELEMENT >
virtual WallMesh< ELEMENT >::~WallMesh ( )
inlinevirtual

Empty Destructor.

264 { }

Member Function Documentation

◆ max_deformation() [1/3]

template<class ELEMENT >
double WallMesh< ELEMENT >::max_deformation ( )
inline

return the maximum y-position of a fluid-wall interface node on the y / z face

281  {
282  double ymax = 1.0;
283  unsigned n_node=nnode();
284  for (unsigned n=0;n<n_node;n++)
285  {
286  Node* nod_pt=node_pt(n);
287  if (nod_pt->is_on_boundary(3)&&nod_pt->is_on_boundary(4))
288  {
289  ymax=max(ymax,nod_pt->x(1));
290  }
291  }
292  return ymax;
293  }
#define max(a, b)
Definition: datatypes.h:23

References oomph::Node::is_on_boundary(), max, n, and oomph::Node::x().

◆ max_deformation() [2/3]

template<class ELEMENT >
double WallMesh< ELEMENT >::max_deformation ( )
inline

return the maximum y-position of a fluid-wall interface node on the y / z face

281  {
282  double ymax = 1.0;
283  unsigned n_node=nnode();
284  for (unsigned n=0;n<n_node;n++)
285  {
286  Node* nod_pt=node_pt(n);
287  if (nod_pt->is_on_boundary(3)&&nod_pt->is_on_boundary(4))
288  {
289  ymax=max(ymax,nod_pt->x(1));
290  }
291  }
292  return ymax;
293  }

References oomph::Node::is_on_boundary(), max, n, and oomph::Node::x().

◆ max_deformation() [3/3]

template<class ELEMENT >
double WallMesh< ELEMENT >::max_deformation ( )
inline

return the maximum y-position of a fluid-wall interface node on the y / z face

287  {
288  double ymax = 1.0;
289  unsigned n_node=nnode();
290  for (unsigned n=0;n<n_node;n++)
291  {
292  Node* nod_pt=node_pt(n);
293  if (nod_pt->is_on_boundary(3)&&nod_pt->is_on_boundary(4))
294  {
295  ymax=max(ymax,nod_pt->x(1));
296  }
297  }
298  return ymax;
299  }

References oomph::Node::is_on_boundary(), max, n, and oomph::Node::x().

◆ min_deformation() [1/3]

template<class ELEMENT >
double WallMesh< ELEMENT >::min_deformation ( )
inline

return the minimum x-position of a fluid-wall interface node on the x / z face

264  {
265  double xmin = 1.0;
266  unsigned n_node=nnode();
267  for (unsigned n=0;n<n_node;n++)
268  {
269  Node* nod_pt=node_pt(n);
270  if (nod_pt->is_on_boundary(1))
271  {
272  xmin=min(xmin,nod_pt->x(0));
273  }
274  }
275  return xmin;
276  }
#define min(a, b)
Definition: datatypes.h:22

References oomph::Node::is_on_boundary(), min, n, and oomph::Node::x().

◆ min_deformation() [2/3]

template<class ELEMENT >
double WallMesh< ELEMENT >::min_deformation ( )
inline

return the minimum x-position of a fluid-wall interface node on the x / z face

264  {
265  double xmin = 1.0;
266  unsigned n_node=nnode();
267  for (unsigned n=0;n<n_node;n++)
268  {
269  Node* nod_pt=node_pt(n);
270  if (nod_pt->is_on_boundary(1))
271  {
272  xmin=min(xmin,nod_pt->x(0));
273  }
274  }
275  return xmin;
276  }

References oomph::Node::is_on_boundary(), min, n, and oomph::Node::x().

◆ min_deformation() [3/3]

template<class ELEMENT >
double WallMesh< ELEMENT >::min_deformation ( )
inline

return the minimum x-position of a fluid-wall interface node on the x / z face

270  {
271  double xmin = 1.0;
272  unsigned n_node=nnode();
273  for (unsigned n=0;n<n_node;n++)
274  {
275  Node* nod_pt=node_pt(n);
276  if (nod_pt->is_on_boundary(1))
277  {
278  xmin=min(xmin,nod_pt->x(0));
279  }
280  }
281  return xmin;
282  }

References oomph::Node::is_on_boundary(), min, n, and oomph::Node::x().


The documentation for this class was generated from the following files: