oomph::QuarterPipeMesh< ELEMENT > Class Template Reference

#include <quarter_pipe_mesh.template.h>

+ Inheritance diagram for oomph::QuarterPipeMesh< ELEMENT >:

Public Member Functions

 QuarterPipeMesh (const unsigned &ntheta, const unsigned &nr, const unsigned &nz, const double &rmin, const double &rmax, const double &length, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
virtual ~QuarterPipeMesh ()
 Empty Destructor. More...
 
QuarterPipeDomaindomain_pt ()
 Access function to domain. More...
 
QuarterPipeDomaindomain_pt () const
 Access function to underlying domain. More...
 
- Public Member Functions inherited from oomph::SimpleCubicMesh< ELEMENT >
 SimpleCubicMesh (const unsigned &nx, const unsigned &ny, const unsigned &nz, const double &lx, const double &ly, const double &lz, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
 SimpleCubicMesh (const unsigned &nx, const unsigned &ny, const unsigned &nz, const double &xmin, const double &xmax, const double &ymin, const double &ymax, const double &zmin, const double &zmax, TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 
const unsignednx () const
 Access function for number of elements in x directions. More...
 
const unsignedny () const
 Access function for number of elements in y directions. More...
 
const unsignednz () const
 Access function for number of elements in y directions. More...
 
- Public Member Functions inherited from oomph::BrickMeshBase
 BrickMeshBase ()
 Constructor (empty) More...
 
 BrickMeshBase (const BrickMeshBase &)=delete
 Broken copy constructor. More...
 
virtual ~BrickMeshBase ()
 Broken assignment operator. More...
 
void setup_boundary_element_info ()
 
void setup_boundary_element_info (std::ostream &outfile)
 
- Public Member Functions inherited from oomph::Mesh
 Mesh ()
 Default constructor. More...
 
 Mesh (const Vector< Mesh * > &sub_mesh_pt)
 
void merge_meshes (const Vector< Mesh * > &sub_mesh_pt)
 
virtual void reset_boundary_element_info (Vector< unsigned > &ntmp_boundary_elements, Vector< Vector< unsigned >> &ntmp_boundary_elements_in_region, Vector< FiniteElement * > &deleted_elements)
 Virtual function to perform the reset boundary elements info rutines. More...
 
template<class BULK_ELEMENT >
void doc_boundary_coordinates (const unsigned &b, std::ofstream &the_file)
 
virtual void scale_mesh (const double &factor)
 
 Mesh (const Mesh &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const Mesh &)=delete
 Broken assignment operator. More...
 
virtual ~Mesh ()
 Virtual Destructor to clean up all memory. More...
 
void flush_element_and_node_storage ()
 
void flush_element_storage ()
 
void flush_node_storage ()
 
Node *& node_pt (const unsigned long &n)
 Return pointer to global node n. More...
 
Nodenode_pt (const unsigned long &n) const
 Return pointer to global node n (const version) More...
 
GeneralisedElement *& element_pt (const unsigned long &e)
 Return pointer to element e. More...
 
GeneralisedElementelement_pt (const unsigned long &e) const
 Return pointer to element e (const version) More...
 
const Vector< GeneralisedElement * > & element_pt () const
 Return reference to the Vector of elements. More...
 
Vector< GeneralisedElement * > & element_pt ()
 Return reference to the Vector of elements. More...
 
FiniteElementfinite_element_pt (const unsigned &e) const
 
Node *& boundary_node_pt (const unsigned &b, const unsigned &n)
 Return pointer to node n on boundary b. More...
 
Nodeboundary_node_pt (const unsigned &b, const unsigned &n) const
 Return pointer to node n on boundary b. More...
 
void set_nboundary (const unsigned &nbound)
 Set the number of boundaries in the mesh. More...
 
void remove_boundary_nodes ()
 Clear all pointers to boundary nodes. More...
 
void remove_boundary_nodes (const unsigned &b)
 
void remove_boundary_node (const unsigned &b, Node *const &node_pt)
 Remove a node from the boundary b. More...
 
void add_boundary_node (const unsigned &b, Node *const &node_pt)
 Add a (pointer to) a node to the b-th boundary. More...
 
void copy_boundary_node_data_from_nodes ()
 
bool boundary_coordinate_exists (const unsigned &i) const
 Indicate whether the i-th boundary has an intrinsic coordinate. More...
 
unsigned long nelement () const
 Return number of elements in the mesh. More...
 
unsigned long nnode () const
 Return number of nodes in the mesh. More...
 
unsigned ndof_types () const
 Return number of dof types in mesh. More...
 
unsigned elemental_dimension () const
 Return number of elemental dimension in mesh. More...
 
unsigned nodal_dimension () const
 Return number of nodal dimension in mesh. More...
 
void add_node_pt (Node *const &node_pt)
 Add a (pointer to a) node to the mesh. More...
 
void add_element_pt (GeneralisedElement *const &element_pt)
 Add a (pointer to) an element to the mesh. More...
 
virtual void node_update (const bool &update_all_solid_nodes=false)
 
virtual void reorder_nodes (const bool &use_old_ordering=true)
 
virtual void get_node_reordering (Vector< Node * > &reordering, const bool &use_old_ordering=true) const
 
template<class BULK_ELEMENT , template< class > class FACE_ELEMENT>
void build_face_mesh (const unsigned &b, Mesh *const &face_mesh_pt)
 
unsigned self_test ()
 Self-test: Check elements and nodes. Return 0 for OK. More...
 
void max_and_min_element_size (double &max_size, double &min_size)
 
double total_size ()
 
void check_inverted_elements (bool &mesh_has_inverted_elements, std::ofstream &inverted_element_file)
 
void check_inverted_elements (bool &mesh_has_inverted_elements)
 
unsigned check_for_repeated_nodes (const double &epsilon=1.0e-12)
 
Vector< Node * > prune_dead_nodes ()
 
unsigned nboundary () const
 Return number of boundaries. More...
 
unsigned long nboundary_node (const unsigned &ibound) const
 Return number of nodes on a particular boundary. More...
 
FiniteElementboundary_element_pt (const unsigned &b, const unsigned &e) const
 Return pointer to e-th finite element on boundary b. More...
 
Nodeget_some_non_boundary_node () const
 
unsigned nboundary_element (const unsigned &b) const
 Return number of finite elements that are adjacent to boundary b. More...
 
int face_index_at_boundary (const unsigned &b, const unsigned &e) const
 
virtual void dump (std::ofstream &dump_file, const bool &use_old_ordering=true) const
 Dump the data in the mesh into a file for restart. More...
 
void dump (const std::string &dump_file_name, const bool &use_old_ordering=true) const
 Dump the data in the mesh into a file for restart. More...
 
virtual void read (std::ifstream &restart_file)
 Read solution from restart file. More...
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
void output_fct_paraview (std::ofstream &file_out, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
void output_fct_paraview (std::ofstream &file_out, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
void output (std::ostream &outfile)
 Output for all elements. More...
 
void output (std::ostream &outfile, const unsigned &n_plot)
 Output at f(n_plot) points in each element. More...
 
void output (FILE *file_pt)
 Output for all elements (C-style output) More...
 
void output (FILE *file_pt, const unsigned &nplot)
 Output at f(n_plot) points in each element (C-style output) More...
 
void output (const std::string &output_filename)
 Output for all elements. More...
 
void output (const std::string &output_filename, const unsigned &n_plot)
 Output at f(n_plot) points in each element. More...
 
void output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt)
 Output a given Vector function at f(n_plot) points in each element. More...
 
void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt)
 
void output_boundaries (std::ostream &outfile)
 Output the nodes on the boundaries (into separate tecplot zones) More...
 
void output_boundaries (const std::string &output_filename)
 
void assign_initial_values_impulsive ()
 Assign initial values for an impulsive start. More...
 
void shift_time_values ()
 
void calculate_predictions ()
 
void set_nodal_and_elemental_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
virtual void set_mesh_level_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void set_consistent_pinned_values_for_continuation (ContinuationStorageScheme *const &continuation_stepper_pt)
 Set consistent values for pinned data in continuation. More...
 
bool does_pointer_correspond_to_mesh_data (double *const &parameter_pt)
 Does the double pointer correspond to any mesh data. More...
 
void set_nodal_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 Set the timestepper associated with the nodal data in the mesh. More...
 
void set_elemental_internal_time_stepper (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
virtual void compute_norm (double &norm)
 
virtual void compute_norm (Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Returns the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
bool is_mesh_distributed () const
 Boolean to indicate if Mesh has been distributed. More...
 
OomphCommunicatorcommunicator_pt () const
 
void delete_all_external_storage ()
 Wipe the storage for all externally-based elements. More...
 

Protected Attributes

unsigned Ntheta
 Number of elements azimuthal direction. More...
 
unsigned Nr
 Number of elements radial direction. More...
 
unsigned Nz
 Number of elements axial direction. More...
 
double Rmin
 Inner radius. More...
 
double Rmax
 Outer radius. More...
 
double Length
 Length. More...
 
QuarterPipeDomainDomain_pt
 Pointer to domain. More...
 
- Protected Attributes inherited from oomph::SimpleCubicMesh< ELEMENT >
unsigned Nx
 Number of elements in x direction. More...
 
unsigned Ny
 Number of elements in y direction. More...
 
unsigned Nz
 Number of elements in y direction. More...
 
double Xmin
 Minimum value of x coordinate. More...
 
double Xmax
 Maximum value of x coordinate. More...
 
double Ymin
 Minimum value of y coordinate. More...
 
double Ymax
 Minimum value of y coordinate. More...
 
double Zmin
 Minimum value of z coordinate. More...
 
double Zmax
 Maximum value of z coordinate. More...
 
- Protected Attributes inherited from oomph::Mesh
Vector< Vector< Node * > > Boundary_node_pt
 
bool Lookup_for_elements_next_boundary_is_setup
 
Vector< Vector< FiniteElement * > > Boundary_element_pt
 
Vector< Vector< int > > Face_index_at_boundary
 
Vector< Node * > Node_pt
 Vector of pointers to nodes. More...
 
Vector< GeneralisedElement * > Element_pt
 Vector of pointers to generalised elements. More...
 
std::vector< boolBoundary_coordinate_exists
 

Additional Inherited Members

- Public Types inherited from oomph::Mesh
typedef void(FiniteElement::* SteadyExactSolutionFctPt) (const Vector< double > &x, Vector< double > &soln)
 
typedef void(FiniteElement::* UnsteadyExactSolutionFctPt) (const double &time, const Vector< double > &x, Vector< double > &soln)
 
- Static Public Attributes inherited from oomph::Mesh
static Steady< 0 > Default_TimeStepper
 The Steady Timestepper. More...
 
static bool Suppress_warning_about_empty_mesh_level_time_stepper_function
 Static boolean flag to control warning about mesh level timesteppers. More...
 
- Protected Member Functions inherited from oomph::SimpleCubicMesh< ELEMENT >
void build_mesh (TimeStepper *time_stepper_pt=&Mesh::Default_TimeStepper)
 Generic mesh construction function: contains all the hard work. More...
 
- Protected Member Functions inherited from oomph::Mesh
unsigned long assign_global_eqn_numbers (Vector< double * > &Dof_pt)
 Assign (global) equation numbers to the nodes. More...
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void describe_local_dofs (std::ostream &out, const std::string &current_string) const
 
void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 Assign local equation numbers in all elements. More...
 
void convert_to_boundary_node (Node *&node_pt, const Vector< FiniteElement * > &finite_element_pt)
 
void convert_to_boundary_node (Node *&node_pt)
 

Detailed Description

template<class ELEMENT>
class oomph::QuarterPipeMesh< ELEMENT >

Non refineable quarter pipe mesh class Deform a simple cubic mesh into a quarter pipe r: radial direction theta: azimuthal direction z: axis direction

Constructor & Destructor Documentation

◆ QuarterPipeMesh()

template<class ELEMENT >
oomph::QuarterPipeMesh< ELEMENT >::QuarterPipeMesh ( const unsigned ntheta,
const unsigned nr,
const unsigned nz,
const double rmin,
const double rmax,
const double length,
TimeStepper time_stepper_pt = &Mesh::Default_TimeStepper 
)

Constructor: Pass number of elements in various directions, the inner and outer radius and the length of the tube

46  : SimpleCubicMesh<ELEMENT>(
47  ntheta, nr, nz, 1.0, 1.0, length, time_stepper_pt)
48  {
49  // Mesh can only be built with 3D Qelements.
50  MeshChecker::assert_geometric_element<QElementGeometricBase, ELEMENT>(3);
51 
52  // Variables declaration
53  Ntheta = ntheta;
54  Nr = nr;
55  Nz = nz;
56  Rmin = rmin;
57  Rmax = rmax;
58  Length = length;
59 
60  // Build macro element-based domain
61  Domain_pt = new QuarterPipeDomain(ntheta, nr, nz, rmin, rmax, length);
62 
63  // Loop over all elements
64  unsigned nel = this->nelement();
65  for (unsigned e = 0; e < nel; e++)
66  {
67  // Try to cast to FiniteElement
68  FiniteElement* el_pt = dynamic_cast<FiniteElement*>(this->element_pt(e));
69 
70  // Set macro element pointer
71  el_pt->set_macro_elem_pt(Domain_pt->macro_element_pt(e));
72  }
73 
74  // Update node coordinates with macroelement coordinates,
75  // updating solid coordinates too.
76  this->node_update(true);
77 
78  // Setup boundary coordinates on inner boundary (boundary 1)
79  unsigned b = 1;
80  unsigned nnod = this->nboundary_node(b);
81  for (unsigned j = 0; j < nnod; j++)
82  {
83  // Pointer to node
84  Node* nod_pt = this->boundary_node_pt(b, j);
85 
86  // Get the Eulerian coordinates
87  double x = nod_pt->x(0);
88  double y = nod_pt->x(1);
89  double z = nod_pt->x(2);
90 
91  // Polar angle
92  double phi = atan2(y, x);
93 
94  // Set boundary coordinates
95  Vector<double> zeta(2);
96  zeta[0] = z;
97  zeta[1] = phi;
98  nod_pt->set_coordinates_on_boundary(b, zeta);
99  }
100  this->Boundary_coordinate_exists[b] = true;
101  }
AnnoyingScalar atan2(const AnnoyingScalar &y, const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:139
Array< double, 1, 3 > e(1./3., 0.5, 2.)
Scalar * b
Definition: benchVecAdd.cpp:17
MacroElement * macro_element_pt(const unsigned &i)
Access to i-th macro element.
Definition: domain.h:116
unsigned long nboundary_node(const unsigned &ibound) const
Return number of nodes on a particular boundary.
Definition: mesh.h:833
std::vector< bool > Boundary_coordinate_exists
Definition: mesh.h:190
virtual void node_update(const bool &update_all_solid_nodes=false)
Definition: mesh.cc:287
const Vector< GeneralisedElement * > & element_pt() const
Return reference to the Vector of elements.
Definition: mesh.h:460
Node *& boundary_node_pt(const unsigned &b, const unsigned &n)
Return pointer to node n on boundary b.
Definition: mesh.h:493
unsigned long nelement() const
Return number of elements in the mesh.
Definition: mesh.h:590
double Length
Length.
Definition: quarter_pipe_mesh.template.h:101
QuarterPipeDomain * Domain_pt
Pointer to domain.
Definition: quarter_pipe_mesh.template.h:104
unsigned Nz
Number of elements axial direction.
Definition: quarter_pipe_mesh.template.h:92
unsigned Nr
Number of elements radial direction.
Definition: quarter_pipe_mesh.template.h:89
double Rmin
Inner radius.
Definition: quarter_pipe_mesh.template.h:95
unsigned Ntheta
Number of elements azimuthal direction.
Definition: quarter_pipe_mesh.template.h:86
double Rmax
Outer radius.
Definition: quarter_pipe_mesh.template.h:98
const unsigned & nz() const
Access function for number of elements in y directions.
Definition: simple_cubic_mesh.template.h:120
Scalar * y
Definition: level1_cplx_impl.h:128
EIGEN_STRONG_INLINE const Eigen::CwiseBinaryOp< Eigen::internal::scalar_zeta_op< typename DerivedX::Scalar >, const DerivedX, const DerivedQ > zeta(const Eigen::ArrayBase< DerivedX > &x, const Eigen::ArrayBase< DerivedQ > &q)
Definition: SpecialFunctionsArrayAPI.h:152
double rmax
Definition: time_harmonic_fourier_decomposed_linear_elasticity/cylinder/cylinder.cc:70
double rmin
Definition: time_harmonic_fourier_decomposed_linear_elasticity/cylinder/cylinder.cc:68
list x
Definition: plotDoE.py:28
std::ptrdiff_t j
Definition: tut_arithmetic_redux_minmax.cpp:2

References atan2(), b, oomph::Mesh::Boundary_coordinate_exists, oomph::Mesh::boundary_node_pt(), oomph::QuarterPipeMesh< ELEMENT >::Domain_pt, e(), oomph::Mesh::element_pt(), j, oomph::QuarterPipeMesh< ELEMENT >::Length, oomph::Domain::macro_element_pt(), oomph::Mesh::nboundary_node(), oomph::Mesh::nelement(), oomph::Mesh::node_update(), oomph::QuarterPipeMesh< ELEMENT >::Nr, oomph::QuarterPipeMesh< ELEMENT >::Ntheta, oomph::QuarterPipeMesh< ELEMENT >::Nz, oomph::SimpleCubicMesh< ELEMENT >::nz(), Global_Parameters::rmax, oomph::QuarterPipeMesh< ELEMENT >::Rmax, Global_Parameters::rmin, oomph::QuarterPipeMesh< ELEMENT >::Rmin, oomph::Node::set_coordinates_on_boundary(), oomph::FiniteElement::set_macro_elem_pt(), plotDoE::x, oomph::Node::x(), y, and Eigen::zeta().

◆ ~QuarterPipeMesh()

template<class ELEMENT >
virtual oomph::QuarterPipeMesh< ELEMENT >::~QuarterPipeMesh ( )
inlinevirtual

Empty Destructor.

68  {
69  delete Domain_pt;
70  }

References oomph::QuarterPipeMesh< ELEMENT >::Domain_pt.

Member Function Documentation

◆ domain_pt() [1/2]

template<class ELEMENT >
QuarterPipeDomain* oomph::QuarterPipeMesh< ELEMENT >::domain_pt ( )
inline

Access function to domain.

74  {
75  return Domain_pt;
76  }

References oomph::QuarterPipeMesh< ELEMENT >::Domain_pt.

◆ domain_pt() [2/2]

template<class ELEMENT >
QuarterPipeDomain* oomph::QuarterPipeMesh< ELEMENT >::domain_pt ( ) const
inline

Access function to underlying domain.

80  {
81  return Domain_pt;
82  }

References oomph::QuarterPipeMesh< ELEMENT >::Domain_pt.

Member Data Documentation

◆ Domain_pt

◆ Length

template<class ELEMENT >
double oomph::QuarterPipeMesh< ELEMENT >::Length
protected

◆ Nr

template<class ELEMENT >
unsigned oomph::QuarterPipeMesh< ELEMENT >::Nr
protected

Number of elements radial direction.

Referenced by oomph::QuarterPipeMesh< ELEMENT >::QuarterPipeMesh().

◆ Ntheta

template<class ELEMENT >
unsigned oomph::QuarterPipeMesh< ELEMENT >::Ntheta
protected

Number of elements azimuthal direction.

Referenced by oomph::QuarterPipeMesh< ELEMENT >::QuarterPipeMesh().

◆ Nz

template<class ELEMENT >
unsigned oomph::QuarterPipeMesh< ELEMENT >::Nz
protected

Number of elements axial direction.

Referenced by oomph::QuarterPipeMesh< ELEMENT >::QuarterPipeMesh().

◆ Rmax

template<class ELEMENT >
double oomph::QuarterPipeMesh< ELEMENT >::Rmax
protected

◆ Rmin

template<class ELEMENT >
double oomph::QuarterPipeMesh< ELEMENT >::Rmin
protected

The documentation for this class was generated from the following files: