#include <multi_domain_axisym_boussinesq_elements.h>

Inheritance diagram for QAxisymAdvectionDiffusionElementWithExternalElement:

Public Member Functions
	QAxisymAdvectionDiffusionElementWithExternalElement ()
	Constructor: call the underlying constructors. More...

void	get_wind_axi_adv_diff (const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &wind) const

void	output (ostream &outfile, const unsigned &nplot)

void	output (ostream &outfile)
	Overload the standard output function with the broken default. More...

void	output (FILE *file_pt)
	C-style output function: Broken default. More...

void	output (FILE *file_pt, const unsigned &n_plot)
	C-style output function: Broken default. More...

void	get_dwind_axi_adv_diff_dexternal_element_data (const unsigned &ipt, const unsigned &i, Vector< double > &result, Vector< unsigned > &global_eqn_number)

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)

void	fill_in_off_diagonal_block_analytic (Vector< double > &residuals, DenseMatrix< double > &jacobian)

	QAxisymAdvectionDiffusionElementWithExternalElement ()
	Constructor: call the underlying constructors. More...

void	get_wind_axi_adv_diff (const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &wind) const

void	output (ostream &outfile, const unsigned &nplot)

void	output (ostream &outfile)
	Overload the standard output function with the broken default. More...

void	output (FILE *file_pt)
	C-style output function: Broken default. More...

void	output (FILE *file_pt, const unsigned &n_plot)
	C-style output function: Broken default. More...

void	get_dwind_axi_adv_diff_dexternal_element_data (const unsigned &ipt, const unsigned &i, Vector< double > &result, Vector< unsigned > &global_eqn_number)

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)

void	fill_in_off_diagonal_block_analytic (Vector< double > &residuals, DenseMatrix< double > &jacobian)

Public Member Functions inherited from oomph::QAxisymAdvectionDiffusionElement< 3 >
	QAxisymAdvectionDiffusionElement ()

	QAxisymAdvectionDiffusionElement (const QAxisymAdvectionDiffusionElement< NNODE_1D > &dummy)=delete
	Broken copy constructor. More...

unsigned	required_nvalue (const unsigned &n) const
	Broken assignment operator. More...

void	output (std::ostream &outfile)

void	output (std::ostream &outfile, const unsigned &n_plot)

void	output (FILE *file_pt)

void	output (FILE *file_pt, const unsigned &n_plot)

void	output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)

Public Member Functions inherited from oomph::QElement< 2, NNODE_1D >
	QElement ()
	Constructor. More...

	QElement (const QElement &)=delete
	Broken copy constructor. More...

void	shape (const Vector< double > &s, Shape &psi) const
	Broken assignment operator. More...

void	dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
	Derivatives of shape functions for specific QElement<2,..> More...

void	d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const

double	invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

double	s_min () const
	Min. value of local coordinate. More...

double	s_max () const
	Max. value of local coordinate. More...

unsigned	nvertex_node () const
	Number of vertex nodes in the element. More...

Node *	vertex_node_pt (const unsigned &j) const
	Pointer to the j-th vertex node in the element. More...

void	local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
	Get local coordinates of node j in the element; vector sets its own size. More...

void	local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
	Get the local fraction of node j in the element. More...

double	local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)

Node *	get_node_at_local_coordinate (const Vector< double > &s) const
	Get the node at the specified local coordinate. More...

unsigned	nnode_1d () const
	Number of nodes along each element edge. More...

unsigned	nplot_points_paraview (const unsigned &nplot) const

unsigned	nsub_elements_paraview (const unsigned &nplot) const

void	write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const

void	write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const

void	write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const

void	get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &use_equally_spaced_interior_sample_points=false) const

std::string	tecplot_zone_string (const unsigned &nplot) const

unsigned	nplot_points (const unsigned &nplot) const

unsigned	get_bulk_node_number (const int &face_index, const unsigned &i) const

int	face_outer_unit_normal_sign (const int &face_index) const
	Get the sign of the outer unit normal on the face given by face_index. More...

CoordinateMappingFctPt	face_to_bulk_coordinate_fct_pt (const int &face_index) const

BulkCoordinateDerivativesFctPt	bulk_coordinate_derivatives_fct_pt (const int &face_index) const

Public Member Functions inherited from oomph::QuadElementBase
	QuadElementBase ()
	Constructor. Empty. More...

Public Member Functions inherited from oomph::QElementBase
	QElementBase ()
	Constructor: Initialise pointers to macro element reference coords. More...

	QElementBase (const QElementBase &)=delete
	Broken copy constructor. More...

virtual	~QElementBase ()
	Broken assignment operator. More...

bool	local_coord_is_valid (const Vector< double > &s)
	Check whether the local coordinate are valid or not. More...

void	move_local_coord_back_into_element (Vector< double > &s) const

virtual void	set_macro_elem_pt (MacroElement *macro_elem_pt)

double &	s_macro_ll (const unsigned &i)

double &	s_macro_ur (const unsigned &i)

double	s_macro_ll (const unsigned &i) const

double	s_macro_ur (const unsigned &i) const

void	get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const

void	get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)

unsigned	nnode_on_face () const

ElementGeometry::ElementGeometry	element_geometry () const
	It's a Q element! More...

Public Member Functions inherited from oomph::QElementGeometricBase
	QElementGeometricBase ()
	Empty default constructor. More...

	QElementGeometricBase (const QElementGeometricBase &)=delete
	Broken copy constructor. More...

Public Member Functions inherited from oomph::FiniteElement
void	set_dimension (const unsigned &dim)

void	set_nodal_dimension (const unsigned &nodal_dim)

void	set_nnodal_position_type (const unsigned &nposition_type)
	Set the number of types required to interpolate the coordinate. More...

void	set_n_node (const unsigned &n)

int	nodal_local_eqn (const unsigned &n, const unsigned &i) const

double	dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const

	FiniteElement ()
	Constructor. More...

virtual	~FiniteElement ()

	FiniteElement (const FiniteElement &)=delete
	Broken copy constructor. More...

void	get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const

MacroElement *	macro_elem_pt ()
	Access function to pointer to macro element. More...

void	get_x (const Vector< double > &s, Vector< double > &x) const

void	get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)

virtual void	set_integration_scheme (Integral *const &integral_pt)
	Set the spatial integration scheme. More...

Integral *const &	integral_pt () const
	Return the pointer to the integration scheme (const version) More...

virtual void	shape_at_knot (const unsigned &ipt, Shape &psi) const

virtual void	dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const

virtual void	d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const

virtual double	J_eulerian (const Vector< double > &s) const

virtual double	J_eulerian_at_knot (const unsigned &ipt) const

void	check_J_eulerian_at_knots (bool &passed) const

void	check_jacobian (const double &jacobian) const

double	dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const

virtual double	dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const

virtual double	dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const

double	d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const

virtual double	d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const

virtual void	assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)

virtual void	describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const

virtual void	assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)

Node *&	node_pt (const unsigned &n)
	Return a pointer to the local node n. More...

Node *const &	node_pt (const unsigned &n) const
	Return a pointer to the local node n (const version) More...

unsigned	nnode () const
	Return the number of nodes. More...

double	raw_nodal_position (const unsigned &n, const unsigned &i) const

double	raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const

double	raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const

double	raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const

double	raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const

double	raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const

double	raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const

double	raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const

double	nodal_position (const unsigned &n, const unsigned &i) const

double	nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const

double	dnodal_position_dt (const unsigned &n, const unsigned &i) const
	Return the i-th component of nodal velocity: dx/dt at local node n. More...

double	dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const

double	nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const

double	nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const

double	dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const

double	dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const

virtual void	get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)

unsigned	nnodal_position_type () const

bool	has_hanging_nodes () const

unsigned	nodal_dimension () const
	Return the required Eulerian dimension of the nodes in this element. More...

virtual Node *	construct_node (const unsigned &n)

virtual Node *	construct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)

virtual Node *	construct_boundary_node (const unsigned &n)

virtual Node *	construct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)

int	get_node_number (Node *const &node_pt) const

double	raw_nodal_value (const unsigned &n, const unsigned &i) const

double	raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const

double	nodal_value (const unsigned &n, const unsigned &i) const

double	nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const

unsigned	dim () const

virtual double	interpolated_x (const Vector< double > &s, const unsigned &i) const
	Return FE interpolated coordinate x[i] at local coordinate s. More...

virtual double	interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const

virtual void	interpolated_x (const Vector< double > &s, Vector< double > &x) const
	Return FE interpolated position x[] at local coordinate s as Vector. More...

virtual void	interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const

virtual double	interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)

virtual void	interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)

unsigned	ngeom_data () const

Data *	geom_data_pt (const unsigned &j)

void	position (const Vector< double > &zeta, Vector< double > &r) const

void	position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const

void	dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)

virtual double	zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const

void	interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const

void	locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)

virtual void	node_update ()

virtual void	identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)

virtual void	identify_geometric_data (std::set< Data * > &geometric_data_pt)

double	size () const

virtual double	compute_physical_size () const

virtual void	point_output_data (const Vector< double > &s, Vector< double > &data)

void	point_output (std::ostream &outfile, const Vector< double > &s)

void	output_paraview (std::ofstream &file_out, const unsigned &nplot) const

virtual void	scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const

virtual void	scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const

virtual void	output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const

virtual void	output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
	Output a time-dependent exact solution over the element. More...

virtual void	output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
	Output a time-dependent exact solution over the element. More...

virtual void	write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const

virtual void	write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const

virtual void	compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
	Calculate the norm of the error and that of the exact solution. More...

virtual void	compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
	Calculate the norm of the error and that of the exact solution. More...

virtual void	compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)

virtual void	compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)

virtual void	compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)

void	integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
	Integrate Vector-valued function over element. More...

void	integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
	Integrate Vector-valued time-dep function over element. More...

virtual void	build_face_element (const int &face_index, FaceElement *face_element_pt)

void	face_node_number_error_check (const unsigned &i) const
	Range check for face node numbers. More...

Public Member Functions inherited from oomph::GeneralisedElement
	GeneralisedElement ()
	Constructor: Initialise all pointers and all values to zero. More...

virtual	~GeneralisedElement ()
	Virtual destructor to clean up any memory allocated by the object. More...

	GeneralisedElement (const GeneralisedElement &)=delete
	Broken copy constructor. More...

void	operator= (const GeneralisedElement &)=delete
	Broken assignment operator. More...

Data *&	internal_data_pt (const unsigned &i)
	Return a pointer to i-th internal data object. More...

Data *const &	internal_data_pt (const unsigned &i) const
	Return a pointer to i-th internal data object (const version) More...

Data *&	external_data_pt (const unsigned &i)
	Return a pointer to i-th external data object. More...

Data *const &	external_data_pt (const unsigned &i) const
	Return a pointer to i-th external data object (const version) More...

unsigned long	eqn_number (const unsigned &ieqn_local) const

int	local_eqn_number (const unsigned long &ieqn_global) const

unsigned	add_external_data (Data *const &data_pt, const bool &fd=true)

bool	external_data_fd (const unsigned &i) const

void	exclude_external_data_fd (const unsigned &i)

void	include_external_data_fd (const unsigned &i)

void	flush_external_data ()
	Flush all external data. More...

void	flush_external_data (Data *const &data_pt)
	Flush the object addressed by data_pt from the external data array. More...

unsigned	ninternal_data () const
	Return the number of internal data objects. More...

unsigned	nexternal_data () const
	Return the number of external data objects. More...

unsigned	ndof () const
	Return the number of equations/dofs in the element. More...

void	dof_vector (const unsigned &t, Vector< double > &dof)
	Return the vector of dof values at time level t. More...

void	dof_pt_vector (Vector< double * > &dof_pt)
	Return the vector of pointers to dof values. More...

void	set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)

void	assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)

void	describe_dofs (std::ostream &out, const std::string &current_string) const

void	add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)

virtual void	assign_local_eqn_numbers (const bool &store_local_dof_pt)

virtual void	complete_setup_of_dependencies ()

virtual void	get_residuals (Vector< double > &residuals)

virtual void	get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

virtual void	get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)

virtual void	get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)

virtual void	get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)

virtual void	get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)

virtual void	get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)

virtual void	get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)

virtual void	get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)

virtual void	get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)

virtual void	compute_norm (Vector< double > &norm)

virtual void	compute_norm (double &norm)

virtual unsigned	ndof_types () const

virtual void	get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const

Public Member Functions inherited from oomph::GeomObject
	GeomObject ()
	Default constructor. More...

	GeomObject (const unsigned &ndim)

	GeomObject (const unsigned &nlagrangian, const unsigned &ndim)

	GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)

	GeomObject (const GeomObject &dummy)=delete
	Broken copy constructor. More...

void	operator= (const GeomObject &)=delete
	Broken assignment operator. More...

virtual	~GeomObject ()
	(Empty) destructor More...

unsigned	nlagrangian () const
	Access function to # of Lagrangian coordinates. More...

unsigned	ndim () const
	Access function to # of Eulerian coordinates. More...

void	set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
	Set # of Lagrangian and Eulerian coordinates. More...

TimeStepper *&	time_stepper_pt ()

TimeStepper *	time_stepper_pt () const

virtual void	position (const double &t, const Vector< double > &zeta, Vector< double > &r) const

virtual void	dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const

virtual void	d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const

virtual void	d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const

Public Member Functions inherited from oomph::AxisymAdvectionDiffusionEquations
	AxisymAdvectionDiffusionEquations ()

	AxisymAdvectionDiffusionEquations (const AxisymAdvectionDiffusionEquations &dummy)=delete
	Broken copy constructor. More...

virtual unsigned	u_index_axi_adv_diff () const
	Broken assignment operator. More...

double	du_dt_axi_adv_diff (const unsigned &n) const

void	disable_ALE ()

void	enable_ALE ()

unsigned	nscalar_paraview () const

void	scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const

std::string	scalar_name_paraview (const unsigned &i) const

void	compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
	Get error against and norm of exact solution. More...

AxisymAdvectionDiffusionSourceFctPt &	source_fct_pt ()
	Access function: Pointer to source function. More...

AxisymAdvectionDiffusionSourceFctPt	source_fct_pt () const
	Access function: Pointer to source function. Const version. More...

AxisymAdvectionDiffusionWindFctPt &	wind_fct_pt ()
	Access function: Pointer to wind function. More...

AxisymAdvectionDiffusionWindFctPt	wind_fct_pt () const
	Access function: Pointer to wind function. Const version. More...

const double &	pe () const
	Peclet number. More...

double *&	pe_pt ()
	Pointer to Peclet number. More...

const double &	pe_st () const
	Peclet number multiplied by Strouhal number. More...

double *&	pe_st_pt ()
	Pointer to Peclet number multipled by Strouha number. More...

const double &	d () const
	Peclet number multiplied by Strouhal number. More...

double *&	d_pt ()
	Pointer to Peclet number multipled by Strouha number. More...

virtual void	get_source_axi_adv_diff (const unsigned &ipt, const Vector< double > &x, double &source) const

void	get_flux (const Vector< double > &s, Vector< double > &flux) const
	Get flux: [du/dr,du/dz]. More...

void	fill_in_contribution_to_residuals (Vector< double > &residuals)
	Add the element's contribution to its residual vector (wrapper) More...

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

double	interpolated_u_axi_adv_diff (const Vector< double > &s) const
	Return FE representation of function value u(s) at local coordinate s. More...

virtual void	dinterpolated_u_axi_adv_diff_ddata (const Vector< double > &s, Vector< double > &du_ddata, Vector< unsigned > &global_eqn_number)

unsigned	self_test ()
	Self-test: Return 0 for OK. More...

Public Member Functions inherited from oomph::ElementWithExternalElement
	ElementWithExternalElement ()

virtual	~ElementWithExternalElement ()
	The destructor, clean up any allocated memory. More...

	ElementWithExternalElement (const ElementWithExternalElement &)=delete
	Broken copy constructor. More...

void	operator= (const ElementWithExternalElement &)=delete
	Broken assignment operator. More...

bool	storage_has_been_allocated () const
	Helper function to check if storage has actually been allocated. More...

FiniteElement *&	external_element_pt (const unsigned &interaction_index, const unsigned &ipt)

FiniteElement *const &	external_element_pt (const unsigned &interaction_index, const unsigned &ipt) const
	Access function to source element, const version. More...

Vector< double > &	external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt)

Vector< double > const &	external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt) const
	Access function to get source element's coords, const version. More...

void	output_external_elements (std::ostream &outfile, const unsigned &interaction_index)

void	initialise_external_element_storage ()

void	flush_all_external_element_storage ()
	Flush the storage for external elements. More...

void	set_ninteraction (const unsigned &n_interaction)

unsigned	ninteraction () const
	Return the number of interactions in the element. More...

virtual void	identify_all_field_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< std::pair< Data *, unsigned >> &paired_interaction_data)

virtual void	identify_all_geometric_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< Data * > &external_geometric_data_pt)

unsigned	nexternal_interaction_field_data () const

Vector< Data * >	external_interaction_field_data_pt () const

unsigned	nexternal_interaction_geometric_data () const

bool	add_external_geometric_data ()
	Are we including external geometric data in the element's Jacobian. More...

bool	add_external_interaction_data ()
	Are we including external data in the element's Jacobian. More...

Vector< Data * >	external_interaction_geometric_data_pt () const

void	ignore_external_geometric_data ()

void	ignore_external_interaction_data ()

void	include_external_geometric_data ()

void	include_external_interaction_data ()

bool	external_geometric_data_is_included () const

void	describe_local_dofs (std::ostream &out, const std::string &curr_string) const

Additional Inherited Members
Public Types inherited from oomph::FiniteElement
typedef void(*	SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)

typedef void(*	UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)

Public Types inherited from oomph::AxisymAdvectionDiffusionEquations
typedef void(*	AxisymAdvectionDiffusionSourceFctPt) (const Vector< double > &x, double &f)

typedef void(*	AxisymAdvectionDiffusionWindFctPt) (const Vector< double > &x, Vector< double > &wind)

Static Public Attributes inherited from oomph::FiniteElement
static double	Tolerance_for_singular_jacobian = 1.0e-16
	Tolerance below which the jacobian is considered singular. More...

static bool	Accept_negative_jacobian = false

static bool	Suppress_output_while_checking_for_inverted_elements

Static Public Attributes inherited from oomph::GeneralisedElement
static bool	Suppress_warning_about_repeated_internal_data

static bool	Suppress_warning_about_repeated_external_data = true

static double	Default_fd_jacobian_step = 1.0e-8

Protected Member Functions inherited from oomph::QAxisymAdvectionDiffusionElement< 3 >
double	dshape_and_dtest_eulerian_axi_adv_diff (const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const

double	dshape_and_dtest_eulerian_at_knot_axi_adv_diff (const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const

Protected Member Functions inherited from oomph::FiniteElement
virtual void	assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const

virtual void	assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const

virtual void	assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const

template<unsigned DIM>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

virtual double	local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

double	local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const

virtual double	local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

virtual void	dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<unsigned DIM>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

virtual void	d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<unsigned DIM>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

virtual void	transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const

void	transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const

virtual void	transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<unsigned DIM>
void	transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<unsigned DIM>
void	transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

virtual void	fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)

virtual void	update_before_nodal_fd ()

virtual void	reset_after_nodal_fd ()

virtual void	update_in_nodal_fd (const unsigned &i)

virtual void	reset_in_nodal_fd (const unsigned &i)

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
	Zero-d specialisation of function to calculate inverse of jacobian mapping. More...

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
	One-d specialisation of function to calculate inverse of jacobian mapping. More...

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
	Two-d specialisation of function to calculate inverse of jacobian mapping. More...

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<>
void	transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<>
void	transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<>
void	transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

Protected Member Functions inherited from oomph::GeneralisedElement
unsigned	add_internal_data (Data *const &data_pt, const bool &fd=true)

bool	internal_data_fd (const unsigned &i) const

void	exclude_internal_data_fd (const unsigned &i)

void	include_internal_data_fd (const unsigned &i)

void	clear_global_eqn_numbers ()

void	add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)

virtual void	assign_additional_local_eqn_numbers ()

int	internal_local_eqn (const unsigned &i, const unsigned &j) const

int	external_local_eqn (const unsigned &i, const unsigned &j)

void	fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

void	fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

void	fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

void	fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

virtual void	update_before_internal_fd ()

virtual void	reset_after_internal_fd ()

virtual void	update_in_internal_fd (const unsigned &i)

virtual void	reset_in_internal_fd (const unsigned &i)

virtual void	update_before_external_fd ()

virtual void	reset_after_external_fd ()

virtual void	update_in_external_fd (const unsigned &i)

virtual void	reset_in_external_fd (const unsigned &i)

virtual void	fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)

virtual void	fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)

virtual void	fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)

virtual void	fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)

virtual void	fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)

virtual void	fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)

virtual void	fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)

Protected Member Functions inherited from oomph::AxisymAdvectionDiffusionEquations
virtual void	fill_in_generic_residual_contribution_axi_adv_diff (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)

Protected Member Functions inherited from oomph::ElementWithExternalElement
void	assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)

void	assign_external_interaction_data_local_eqn_numbers (const bool &store_local_dof_pt)

void	fill_in_jacobian_from_external_interaction_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_by_fd (DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_field_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_field_by_fd (DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_geometric_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_geometric_by_fd (DenseMatrix< double > &jacobian)

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

virtual void	update_before_external_interaction_field_fd ()

virtual void	reset_after_external_interaction_field_fd ()

virtual void	update_in_external_interaction_field_fd (const unsigned &i)

virtual void	reset_in_external_interaction_field_fd (const unsigned &i)

virtual void	update_before_external_interaction_geometric_fd ()

virtual void	reset_after_external_interaction_geometric_fd ()

virtual void	update_in_external_interaction_geometric_fd (const unsigned &i)

virtual void	reset_in_external_interaction_geometric_fd (const unsigned &i)

Protected Attributes inherited from oomph::FiniteElement
MacroElement *	Macro_elem_pt
	Pointer to the element's macro element (NULL by default) More...

Protected Attributes inherited from oomph::GeomObject
unsigned	NLagrangian
	Number of Lagrangian (intrinsic) coordinates. More...

unsigned	Ndim
	Number of Eulerian coordinates. More...

TimeStepper *	Geom_object_time_stepper_pt

Protected Attributes inherited from oomph::AxisymAdvectionDiffusionEquations
double *	Pe_pt
	Pointer to global Peclet number. More...

double *	PeSt_pt
	Pointer to global Peclet number multiplied by Strouhal number. More...

double *	D_pt
	Pointer to global Diffusion parameter. More...

AxisymAdvectionDiffusionSourceFctPt	Source_fct_pt
	Pointer to source function: More...

AxisymAdvectionDiffusionWindFctPt	Wind_fct_pt
	Pointer to wind function: More...

bool	ALE_is_disabled
	Boolean flag to indicate whether AlE formulation is disable. More...

Protected Attributes inherited from oomph::ElementWithExternalElement
bool	Add_external_interaction_data
	Boolean flag to indicate whether to include the external data. More...

bool	Add_external_geometric_data
	Boolean flag to indicate whether to include the external geometric data. More...

Data **	External_interaction_field_data_pt

Data **	External_interaction_geometric_data_pt

Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned	Default_Initial_Nvalue = 0
	Default value for the number of values at a node. More...

static const double	Node_location_tolerance = 1.0e-14

static const unsigned	N2deriv [] = {0, 1, 3, 6}

Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< double >	Dummy_matrix

static std::deque< double * >	Dof_pt_deque

Detailed Description

Build QAdvectionDiffusionElementWithExternalElement that inherits from ElementWithExternalElement so that it can "communicate" with the QCrouzeixRaviartElementWithExternalElement

Constructor & Destructor Documentation

◆ QAxisymAdvectionDiffusionElementWithExternalElement() [1/2]

QAxisymAdvectionDiffusionElementWithExternalElement::QAxisymAdvectionDiffusionElementWithExternalElement ( )

inline

Constructor: call the underlying constructors.

                                                        : 
  QAxisymAdvectionDiffusionElement<3>(),
   ElementWithExternalElement()
   { 
    //There is only one interaction
    this->set_ninteraction(1);
   } 

◆ QAxisymAdvectionDiffusionElementWithExternalElement() [2/2]

QAxisymAdvectionDiffusionElementWithExternalElement::QAxisymAdvectionDiffusionElementWithExternalElement ( )

inline

Constructor: call the underlying constructors.

                                                        : 
  QAxisymAdvectionDiffusionElement<3>(),
   ElementWithExternalElement()
   { 
    //There is only one interaction
    this->set_ninteraction(1);
   } 

Member Function Documentation

◆ fill_in_contribution_to_jacobian() [1/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_contribution_to_jacobian	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

inlinevirtual

Compute the element's residual vector and the Jacobian matrix. Jacobian is computed by finite-differencing.

Reimplemented from oomph::GeneralisedElement.

   {
 #ifdef USE_FD_JACOBIAN
  
    // This function computes the Jacobian by finite-differencing
    ElementWithExternalElement::
     fill_in_contribution_to_jacobian(residuals,jacobian);
  
 #else
  
    //Get the contribution from the basic advection-diffusion element
    QAxisymAdvectionDiffusionElement<3>::
     fill_in_contribution_to_jacobian(residuals,jacobian);
    //Get the off-diagonal terms analytically
    this->fill_in_off_diagonal_block_analytic(residuals,jacobian);
  
 #endif
   }

References oomph::AxisymAdvectionDiffusionEquations::fill_in_contribution_to_jacobian(), and oomph::ElementWithExternalElement::fill_in_contribution_to_jacobian().

◆ fill_in_contribution_to_jacobian() [2/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_contribution_to_jacobian	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

inlinevirtual

Compute the element's residual vector and the Jacobian matrix. Jacobian is computed by finite-differencing.

Reimplemented from oomph::GeneralisedElement.

   {
 #ifdef USE_FD_JACOBIAN
  
    // This function computes the Jacobian by finite-differencing
    ElementWithExternalElement::
     fill_in_contribution_to_jacobian(residuals,jacobian);
  
 #else
  
    //Get the contribution from the basic advection-diffusion element
    QAxisymAdvectionDiffusionElement<3>::
     fill_in_contribution_to_jacobian(residuals,jacobian);
    //Get the off-diagonal terms analytically
    this->fill_in_off_diagonal_block_analytic(residuals,jacobian);
  
 #endif
   }

References oomph::AxisymAdvectionDiffusionEquations::fill_in_contribution_to_jacobian(), and oomph::ElementWithExternalElement::fill_in_contribution_to_jacobian().

◆ fill_in_contribution_to_jacobian_and_mass_matrix() [1/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_contribution_to_jacobian_and_mass_matrix	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian,
		DenseMatrix< double > &	mass_matrix
	)

inlinevirtual

Add the element's contribution to its residuals vector, jacobian matrix and mass matrix

Reimplemented from oomph::GeneralisedElement.

   {
    //Call the standard (Broken) function
    //which will prevent these elements from being used
    //in eigenproblems until replaced.
    FiniteElement::fill_in_contribution_to_jacobian_and_mass_matrix(
      residuals,jacobian,mass_matrix);
   }

References oomph::GeneralisedElement::fill_in_contribution_to_jacobian_and_mass_matrix().

◆ fill_in_contribution_to_jacobian_and_mass_matrix() [2/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_contribution_to_jacobian_and_mass_matrix	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian,
		DenseMatrix< double > &	mass_matrix
	)

inlinevirtual

Add the element's contribution to its residuals vector, jacobian matrix and mass matrix

Reimplemented from oomph::GeneralisedElement.

   {
    //Call the standard (Broken) function
    //which will prevent these elements from being used
    //in eigenproblems until replaced.
    FiniteElement::fill_in_contribution_to_jacobian_and_mass_matrix(
      residuals,jacobian,mass_matrix);
   }

References oomph::GeneralisedElement::fill_in_contribution_to_jacobian_and_mass_matrix().

◆ fill_in_off_diagonal_block_analytic() [1/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_off_diagonal_block_analytic	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

inline

Compute the contribution of the external degrees of freedom (velocities) on the AdvectionDiffusion equations

   {
    //Local storage for the  index at which the temperature is stored
    const unsigned u_nodal_axi_adv_diff = this->u_index_axi_adv_diff();
  
    //Find out how many nodes there are
    const unsigned n_node = this->nnode();
    
    //Set up memory for the shape and test functions and their derivatives
    Shape psi(n_node), test(n_node);
    DShape dpsidx(n_node,2), dtestdx(n_node,2);
    
    //Number of integration points
    const unsigned n_intpt = this->integral_pt()->nweight();
    
    //Integers to store the local equations and unknowns
    int local_eqn=0, local_unknown=0;
  
    //Get the peclet number
    const double peclet = this->pe();
    
    //Loop over the integration points
    for(unsigned ipt=0;ipt<n_intpt;ipt++)
     {
      //Get the integral weight
      double w = this->integral_pt()->weight(ipt);
      
      //Call the derivatives of the shape and test functions
      double J = 
       this->dshape_and_dtest_eulerian_at_knot_axi_adv_diff(ipt,psi,dpsidx,
                                                            test,dtestdx);
      
      //Premultiply the weights and the Jacobian
      double W = w*J;
      
      //Calculate local values of the derivatives of the solution
      Vector<double> interpolated_dudx(2,0.0);
      //Calculate radius
      double r = 0.0;
      // Loop over nodes
      for(unsigned l=0;l<n_node;l++) 
       {
        r += this->raw_nodal_position(l,0)*psi(l);
        // Loop over directions
        for(unsigned j=0;j<2;j++)
         {
          interpolated_dudx[j] += 
           this->raw_nodal_value(l,u_nodal_axi_adv_diff)*dpsidx(l,j);
         }
       }
      
      //Get the derivatives of the wind wrt the unknowns
      //of the external element
      Vector<double> dwind_dexternal_element_data;
  
      //Vector of global equation number corresponding to the external
      //element's data
      Vector<unsigned> global_eqn_number_of_external_element_data;
  
  
      //Loop over the wind directions
      for(unsigned i2=0;i2<2;i2++)
       {
        //Get the appropriate derivatives
        this->get_dwind_axi_adv_diff_dexternal_element_data(
         ipt,i2,dwind_dexternal_element_data,
         global_eqn_number_of_external_element_data);
        
        //Find out how many external data there are
        const unsigned n_external_element_data = 
         global_eqn_number_of_external_element_data.size();
        
        //Loop over the test functions
        for(unsigned l=0;l<n_node;l++)
         {
          //Assemble the contributions of the velocities 
          //the Advection-Diffusion equations
          
          //If it's not a boundary condition
          local_eqn = this->nodal_local_eqn(l,u_nodal_axi_adv_diff);
          if(local_eqn >= 0)
           {
            //Loop over the external data
            for(unsigned l2=0;l2<n_external_element_data;l2++)
             { 
              //Find the local equation number corresponding to the global
              //unknown
              local_unknown = 
               this->local_eqn_number(
                global_eqn_number_of_external_element_data[l2]);
              if(local_unknown >= 0)
               {
                //Add contribution to jacobian matrix
                jacobian(local_eqn,local_unknown) 
                 -= peclet*dwind_dexternal_element_data[l2]*
                 interpolated_dudx[i2]*test(l)*r*W;
               }
             }
           }
         }
       }
     }
   }

References J, j, oomph::pe(), UniformPSDSelfTest::r, Eigen::test, w, and oomph::QuadTreeNames::W.

◆ fill_in_off_diagonal_block_analytic() [2/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_off_diagonal_block_analytic	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

inline

Compute the contribution of the external degrees of freedom (velocities) on the AdvectionDiffusion equations

   {
    //Local storage for the  index at which the temperature is stored
    const unsigned u_nodal_axi_adv_diff = this->u_index_axi_adv_diff();
  
    //Find out how many nodes there are
    const unsigned n_node = this->nnode();
    
    //Set up memory for the shape and test functions and their derivatives
    Shape psi(n_node), test(n_node);
    DShape dpsidx(n_node,2), dtestdx(n_node,2);
    
    //Number of integration points
    const unsigned n_intpt = this->integral_pt()->nweight();
    
    //Integers to store the local equations and unknowns
    int local_eqn=0, local_unknown=0;
  
    //Get the peclet number
    const double peclet = this->pe();
    
    //Loop over the integration points
    for(unsigned ipt=0;ipt<n_intpt;ipt++)
     {
      //Get the integral weight
      double w = this->integral_pt()->weight(ipt);
      
      //Call the derivatives of the shape and test functions
      double J = 
       this->dshape_and_dtest_eulerian_at_knot_axi_adv_diff(ipt,psi,dpsidx,
                                                            test,dtestdx);
      
      //Premultiply the weights and the Jacobian
      double W = w*J;
      
      //Calculate local values of the derivatives of the solution
      Vector<double> interpolated_dudx(2,0.0);
      //Calculate radius
      double r = 0.0;
      // Loop over nodes
      for(unsigned l=0;l<n_node;l++) 
       {
        r += this->raw_nodal_position(l,0)*psi(l);
        // Loop over directions
        for(unsigned j=0;j<2;j++)
         {
          interpolated_dudx[j] += 
           this->raw_nodal_value(l,u_nodal_axi_adv_diff)*dpsidx(l,j);
         }
       }
      
      //Get the derivatives of the wind wrt the unknowns
      //of the external element
      Vector<double> dwind_dexternal_element_data;
  
      //Vector of global equation number corresponding to the external
      //element's data
      Vector<unsigned> global_eqn_number_of_external_element_data;
  
  
      //Loop over the wind directions
      for(unsigned i2=0;i2<2;i2++)
       {
        //Get the appropriate derivatives
        this->get_dwind_axi_adv_diff_dexternal_element_data(
         ipt,i2,dwind_dexternal_element_data,
         global_eqn_number_of_external_element_data);
        
        //Find out how many external data there are
        const unsigned n_external_element_data = 
         global_eqn_number_of_external_element_data.size();
        
        //Loop over the test functions
        for(unsigned l=0;l<n_node;l++)
         {
          //Assemble the contributions of the velocities 
          //the Advection-Diffusion equations
          
          //If it's not a boundary condition
          local_eqn = this->nodal_local_eqn(l,u_nodal_axi_adv_diff);
          if(local_eqn >= 0)
           {
            //Loop over the external data
            for(unsigned l2=0;l2<n_external_element_data;l2++)
             { 
              //Find the local equation number corresponding to the global
              //unknown
              local_unknown = 
               this->local_eqn_number(
                global_eqn_number_of_external_element_data[l2]);
              if(local_unknown >= 0)
               {
                //Add contribution to jacobian matrix
                jacobian(local_eqn,local_unknown) 
                 -= peclet*dwind_dexternal_element_data[l2]*
                 interpolated_dudx[i2]*test(l)*r*W;
               }
             }
           }
         }
       }
     }
   }

References J, j, oomph::pe(), UniformPSDSelfTest::r, Eigen::test, w, and oomph::QuadTreeNames::W.

◆ get_dwind_axi_adv_diff_dexternal_element_data() [1/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::get_dwind_axi_adv_diff_dexternal_element_data	(	const unsigned &	ipt,
		const unsigned &	i,
		Vector< double > &	result,
		Vector< unsigned > &	global_eqn_number
	)

Fill in the derivatives of the wind with respect to the external unknowns

Fill in the derivatives of the wind with respect to the external unknowns in the advection-diffusion equations

 {
  // The interaction index is 0 in this case
  unsigned interaction=0;
  
  // Dynamic cast "other" element to correct type
  QAxisymCrouzeixRaviartElementWithExternalElement* source_el_pt=
   dynamic_cast<QAxisymCrouzeixRaviartElementWithExternalElement*>
   (external_element_pt(interaction,ipt));
   
  // Get the external element's derivatives of the velocity with respect
  // to the data. The wind is just the Navier--Stokes velocity, so this
  // is all that's required
  source_el_pt->dinterpolated_u_axi_nst_ddata(
   external_element_local_coord(interaction,ipt),i,result,
   global_eqn_number);
 }

References oomph::AxisymmetricNavierStokesEquations::dinterpolated_u_axi_nst_ddata(), and i.

◆ get_dwind_axi_adv_diff_dexternal_element_data() [2/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::get_dwind_axi_adv_diff_dexternal_element_data	(	const unsigned &	ipt,
		const unsigned &	i,
		Vector< double > &	result,
		Vector< unsigned > &	global_eqn_number
	)

Fill in the derivatives of the wind with respect to the external unknowns

◆ get_wind_axi_adv_diff() [1/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::get_wind_axi_adv_diff	(	const unsigned &	ipt,
		const Vector< double > &	s,
		const Vector< double > &	x,
		Vector< double > &	wind
	)		const

virtual

Overload the wind function in the advection-diffusion equations. This provides the coupling from the Navier–Stokes equations to the advection-diffusion equations because the wind is the fluid velocity, obtained from the source element in the other mesh

Overload the wind function in the advection-diffusion equations. This provides the coupling from the Navier–Stokes equations to the advection-diffusion equations because the wind is the fluid velocity, obtained from the source elements in the other mesh

Reimplemented from oomph::AxisymAdvectionDiffusionEquations.

 {
  // The interaction index is 0 in this case
  unsigned interaction=0;
  
  // Dynamic cast "other" element to correct type
  QAxisymCrouzeixRaviartElementWithExternalElement* source_el_pt=
   dynamic_cast<QAxisymCrouzeixRaviartElementWithExternalElement*>
   (external_element_pt(interaction,ipt));
  
  //The wind function is simply the velocity at the points of the "other" el
  source_el_pt->interpolated_u_axi_nst
   (external_element_local_coord(interaction,ipt),wind);
 }  

References oomph::AxisymmetricNavierStokesEquations::interpolated_u_axi_nst().

◆ get_wind_axi_adv_diff() [2/2]

void QAxisymAdvectionDiffusionElementWithExternalElement::get_wind_axi_adv_diff	(	const unsigned &	ipt,
		const Vector< double > &	s,
		const Vector< double > &	x,
		Vector< double > &	wind
	)		const

virtual

Overload the wind function in the advection-diffusion equations. This provides the coupling from the Navier–Stokes equations to the advection-diffusion equations because the wind is the fluid velocity, obtained from the source element in the other mesh

Reimplemented from oomph::AxisymAdvectionDiffusionEquations.

◆ output() [1/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output ( FILE * file_pt )

inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

1070 {FiniteElement::output(file_pt);}

output

void output(std::ostream &outfile, const unsigned &nplot)

Overload output function.

Definition: overloaded_element_body.h:490

References oomph::FiniteElement::output().

◆ output() [2/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output ( FILE * file_pt )

inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

1070 {FiniteElement::output(file_pt);}

References oomph::FiniteElement::output().

◆ output() [3/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output	(	FILE *	file_pt,
		const unsigned &	n_plot
	)

inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

1074 {FiniteElement::output(file_pt,n_plot);}

References oomph::FiniteElement::output().

◆ output() [4/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output	(	FILE *	file_pt,
		const unsigned &	n_plot
	)

inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

1074 {FiniteElement::output(file_pt,n_plot);}

References oomph::FiniteElement::output().

◆ output() [5/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output ( ostream & outfile )

inlinevirtual

Overload the standard output function with the broken default.

Reimplemented from oomph::FiniteElement.

1066 {FiniteElement::output(outfile);}

References oomph::FiniteElement::output().

◆ output() [6/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output ( ostream & outfile )

inlinevirtual

Overload the standard output function with the broken default.

Reimplemented from oomph::FiniteElement.

1066 {FiniteElement::output(outfile);}

References oomph::FiniteElement::output().

◆ output() [7/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output	(	ostream &	outfile,
		const unsigned &	nplot
	)

inlinevirtual

Output function: Output x, y, theta at Nplot^DIM plot points

Reimplemented from oomph::FiniteElement.

   {
    //vector of local coordinates
    Vector<double> s(2);
    
    // Tecplot header info
    outfile << this->tecplot_zone_string(nplot);
    
    // Loop over plot points
    unsigned num_plot_points=this->nplot_points(nplot);
    for (unsigned iplot=0;iplot<num_plot_points;iplot++)
     {
      // Get local coordinates of plot point
      this->get_s_plot(iplot,nplot,s);
      
      // Output the position of the plot point
      for(unsigned i=0;i<2;i++)
       {outfile << this->interpolated_x(s,i) << " ";}
      
      // Output the temperature (the advected variable) at the plot point
      outfile << this->interpolated_u_axi_adv_diff(s) << std::endl;
     }
    outfile << std::endl;
    
    // Write tecplot footer (e.g. FE connectivity lists)
    this->write_tecplot_zone_footer(outfile,nplot);
    
   } //End of output function

References i, and s.

◆ output() [8/8]

void QAxisymAdvectionDiffusionElementWithExternalElement::output	(	ostream &	outfile,
		const unsigned &	nplot
	)

inlinevirtual

Output function: Output x, y, theta at Nplot^DIM plot points

Reimplemented from oomph::FiniteElement.

   {
    //vector of local coordinates
    Vector<double> s(2);
    
    // Tecplot header info
    outfile << this->tecplot_zone_string(nplot);
    
    // Loop over plot points
    unsigned num_plot_points=this->nplot_points(nplot);
    for (unsigned iplot=0;iplot<num_plot_points;iplot++)
     {
      // Get local coordinates of plot point
      this->get_s_plot(iplot,nplot,s);
      
      // Output the position of the plot point
      for(unsigned i=0;i<2;i++)
       {outfile << this->interpolated_x(s,i) << " ";}
      
      // Output the temperature (the advected variable) at the plot point
      outfile << this->interpolated_u_axi_adv_diff(s) << std::endl;
     }
    outfile << std::endl;
    
    // Write tecplot footer (e.g. FE connectivity lists)
    this->write_tecplot_zone_footer(outfile,nplot);
    
   } //End of output function

References i, and s.

The documentation for this class was generated from the following file:

axisym_heat_sphere/multi_domain_axisym_boussinesq_elements.h

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ QAxisymAdvectionDiffusionElementWithExternalElement() [1/2]

◆ QAxisymAdvectionDiffusionElementWithExternalElement() [2/2]

Member Function Documentation

◆ fill_in_contribution_to_jacobian() [1/2]

◆ fill_in_contribution_to_jacobian() [2/2]

◆ fill_in_contribution_to_jacobian_and_mass_matrix() [1/2]

◆ fill_in_contribution_to_jacobian_and_mass_matrix() [2/2]

◆ fill_in_off_diagonal_block_analytic() [1/2]

◆ fill_in_off_diagonal_block_analytic() [2/2]

◆ get_dwind_axi_adv_diff_dexternal_element_data() [1/2]

◆ get_dwind_axi_adv_diff_dexternal_element_data() [2/2]

◆ get_wind_axi_adv_diff() [1/2]

◆ get_wind_axi_adv_diff() [2/2]

◆ output() [1/8]

◆ output() [2/8]

◆ output() [3/8]

◆ output() [4/8]

◆ output() [5/8]

◆ output() [6/8]

◆ output() [7/8]

◆ output() [8/8]