#include <element_with_external_element.h>

Inheritance diagram for oomph::ElementWithExternalElement:

Public Member Functions
	ElementWithExternalElement ()

virtual	~ElementWithExternalElement ()
	The destructor, clean up any allocated memory. More...

	ElementWithExternalElement (const ElementWithExternalElement &)=delete
	Broken copy constructor. More...

void	operator= (const ElementWithExternalElement &)=delete
	Broken assignment operator. More...

bool	storage_has_been_allocated () const
	Helper function to check if storage has actually been allocated. More...

FiniteElement *&	external_element_pt (const unsigned &interaction_index, const unsigned &ipt)

FiniteElement *const &	external_element_pt (const unsigned &interaction_index, const unsigned &ipt) const
	Access function to source element, const version. More...

Vector< double > &	external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt)

Vector< double > const &	external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt) const
	Access function to get source element's coords, const version. More...

void	output_external_elements (std::ostream &outfile, const unsigned &interaction_index)

void	initialise_external_element_storage ()

void	flush_all_external_element_storage ()
	Flush the storage for external elements. More...

void	set_ninteraction (const unsigned &n_interaction)

unsigned	ninteraction () const
	Return the number of interactions in the element. More...

virtual void	identify_all_field_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< std::pair< Data *, unsigned >> &paired_interaction_data)

virtual void	identify_all_geometric_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< Data * > &external_geometric_data_pt)

unsigned	nexternal_interaction_field_data () const

Vector< Data * >	external_interaction_field_data_pt () const

unsigned	nexternal_interaction_geometric_data () const

bool	add_external_geometric_data ()
	Are we including external geometric data in the element's Jacobian. More...

bool	add_external_interaction_data ()
	Are we including external data in the element's Jacobian. More...

Vector< Data * >	external_interaction_geometric_data_pt () const

void	ignore_external_geometric_data ()

void	ignore_external_interaction_data ()

void	include_external_geometric_data ()

void	include_external_interaction_data ()

bool	external_geometric_data_is_included () const

void	describe_local_dofs (std::ostream &out, const std::string &curr_string) const

Public Member Functions inherited from oomph::FiniteElement
void	set_dimension (const unsigned &dim)

void	set_nodal_dimension (const unsigned &nodal_dim)

void	set_nnodal_position_type (const unsigned &nposition_type)
	Set the number of types required to interpolate the coordinate. More...

void	set_n_node (const unsigned &n)

int	nodal_local_eqn (const unsigned &n, const unsigned &i) const

double	dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const

	FiniteElement ()
	Constructor. More...

virtual	~FiniteElement ()

	FiniteElement (const FiniteElement &)=delete
	Broken copy constructor. More...

virtual bool	local_coord_is_valid (const Vector< double > &s)
	Broken assignment operator. More...

virtual void	move_local_coord_back_into_element (Vector< double > &s) const

void	get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const

virtual void	local_coordinate_of_node (const unsigned &j, Vector< double > &s) const

virtual void	local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)

virtual double	local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)

virtual void	set_macro_elem_pt (MacroElement *macro_elem_pt)

MacroElement *	macro_elem_pt ()
	Access function to pointer to macro element. More...

void	get_x (const Vector< double > &s, Vector< double > &x) const

void	get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)

virtual void	get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const

virtual void	get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)

virtual void	set_integration_scheme (Integral *const &integral_pt)
	Set the spatial integration scheme. More...

Integral *const &	integral_pt () const
	Return the pointer to the integration scheme (const version) More...

virtual void	shape (const Vector< double > &s, Shape &psi) const =0

virtual void	shape_at_knot (const unsigned &ipt, Shape &psi) const

virtual void	dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const

virtual void	dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const

virtual void	d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const

virtual void	d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const

virtual double	J_eulerian (const Vector< double > &s) const

virtual double	J_eulerian_at_knot (const unsigned &ipt) const

void	check_J_eulerian_at_knots (bool &passed) const

void	check_jacobian (const double &jacobian) const

double	dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const

virtual double	dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const

virtual double	dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const

double	d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const

virtual double	d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const

virtual void	assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)

virtual void	describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const

virtual void	assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)

Node *&	node_pt (const unsigned &n)
	Return a pointer to the local node n. More...

Node *const &	node_pt (const unsigned &n) const
	Return a pointer to the local node n (const version) More...

unsigned	nnode () const
	Return the number of nodes. More...

virtual unsigned	nnode_1d () const

double	raw_nodal_position (const unsigned &n, const unsigned &i) const

double	raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const

double	raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const

double	raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const

double	raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const

double	raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const

double	raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const

double	raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const

double	nodal_position (const unsigned &n, const unsigned &i) const

double	nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const

double	dnodal_position_dt (const unsigned &n, const unsigned &i) const
	Return the i-th component of nodal velocity: dx/dt at local node n. More...

double	dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const

double	nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const

double	nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const

double	dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const

double	dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const

virtual void	get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)

virtual void	disable_ALE ()

virtual void	enable_ALE ()

virtual unsigned	required_nvalue (const unsigned &n) const

unsigned	nnodal_position_type () const

bool	has_hanging_nodes () const

unsigned	nodal_dimension () const
	Return the required Eulerian dimension of the nodes in this element. More...

virtual unsigned	nvertex_node () const

virtual Node *	vertex_node_pt (const unsigned &j) const

virtual Node *	construct_node (const unsigned &n)

virtual Node *	construct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)

virtual Node *	construct_boundary_node (const unsigned &n)

virtual Node *	construct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)

int	get_node_number (Node *const &node_pt) const

virtual Node *	get_node_at_local_coordinate (const Vector< double > &s) const

double	raw_nodal_value (const unsigned &n, const unsigned &i) const

double	raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const

double	nodal_value (const unsigned &n, const unsigned &i) const

double	nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const

unsigned	dim () const

virtual ElementGeometry::ElementGeometry	element_geometry () const
	Return the geometry type of the element (either Q or T usually). More...

virtual double	interpolated_x (const Vector< double > &s, const unsigned &i) const
	Return FE interpolated coordinate x[i] at local coordinate s. More...

virtual double	interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const

virtual void	interpolated_x (const Vector< double > &s, Vector< double > &x) const
	Return FE interpolated position x[] at local coordinate s as Vector. More...

virtual void	interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const

virtual double	interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)

virtual void	interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)

unsigned	ngeom_data () const

Data *	geom_data_pt (const unsigned &j)

void	position (const Vector< double > &zeta, Vector< double > &r) const

void	position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const

void	dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)

virtual double	zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const

void	interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const

void	locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)

virtual void	node_update ()

virtual void	identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)

virtual void	identify_geometric_data (std::set< Data * > &geometric_data_pt)

virtual double	s_min () const
	Min value of local coordinate. More...

virtual double	s_max () const
	Max. value of local coordinate. More...

double	size () const

virtual double	compute_physical_size () const

virtual void	point_output_data (const Vector< double > &s, Vector< double > &data)

void	point_output (std::ostream &outfile, const Vector< double > &s)

virtual unsigned	nplot_points_paraview (const unsigned &nplot) const

virtual unsigned	nsub_elements_paraview (const unsigned &nplot) const

void	output_paraview (std::ofstream &file_out, const unsigned &nplot) const

virtual void	write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const

virtual void	write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const

virtual void	write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const

virtual unsigned	nscalar_paraview () const

virtual void	scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const

virtual void	scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const

virtual void	scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const

virtual std::string	scalar_name_paraview (const unsigned &i) const

virtual void	output (std::ostream &outfile)

virtual void	output (std::ostream &outfile, const unsigned &n_plot)

virtual void	output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const

virtual void	output (FILE *file_pt)

virtual void	output (FILE *file_pt, const unsigned &n_plot)

virtual void	output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
	Output an exact solution over the element. More...

virtual void	output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
	Output a time-dependent exact solution over the element. More...

virtual void	output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
	Output a time-dependent exact solution over the element. More...

virtual void	get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const

virtual std::string	tecplot_zone_string (const unsigned &nplot) const

virtual void	write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const

virtual void	write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const

virtual unsigned	nplot_points (const unsigned &nplot) const

virtual void	compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
	Calculate the norm of the error and that of the exact solution. More...

virtual void	compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
	Calculate the norm of the error and that of the exact solution. More...

virtual void	compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)

virtual void	compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)

virtual void	compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)

virtual void	compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)

void	integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
	Integrate Vector-valued function over element. More...

void	integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
	Integrate Vector-valued time-dep function over element. More...

virtual void	build_face_element (const int &face_index, FaceElement *face_element_pt)

virtual unsigned	self_test ()

virtual unsigned	get_bulk_node_number (const int &face_index, const unsigned &i) const

virtual int	face_outer_unit_normal_sign (const int &face_index) const
	Get the sign of the outer unit normal on the face given by face_index. More...

virtual unsigned	nnode_on_face () const

void	face_node_number_error_check (const unsigned &i) const
	Range check for face node numbers. More...

virtual CoordinateMappingFctPt	face_to_bulk_coordinate_fct_pt (const int &face_index) const

virtual BulkCoordinateDerivativesFctPt	bulk_coordinate_derivatives_fct_pt (const int &face_index) const

Public Member Functions inherited from oomph::GeneralisedElement
	GeneralisedElement ()
	Constructor: Initialise all pointers and all values to zero. More...

virtual	~GeneralisedElement ()
	Virtual destructor to clean up any memory allocated by the object. More...

	GeneralisedElement (const GeneralisedElement &)=delete
	Broken copy constructor. More...

void	operator= (const GeneralisedElement &)=delete
	Broken assignment operator. More...

Data *&	internal_data_pt (const unsigned &i)
	Return a pointer to i-th internal data object. More...

Data *const &	internal_data_pt (const unsigned &i) const
	Return a pointer to i-th internal data object (const version) More...

Data *&	external_data_pt (const unsigned &i)
	Return a pointer to i-th external data object. More...

Data *const &	external_data_pt (const unsigned &i) const
	Return a pointer to i-th external data object (const version) More...

unsigned long	eqn_number (const unsigned &ieqn_local) const

int	local_eqn_number (const unsigned long &ieqn_global) const

unsigned	add_external_data (Data *const &data_pt, const bool &fd=true)

bool	external_data_fd (const unsigned &i) const

void	exclude_external_data_fd (const unsigned &i)

void	include_external_data_fd (const unsigned &i)

void	flush_external_data ()
	Flush all external data. More...

void	flush_external_data (Data *const &data_pt)
	Flush the object addressed by data_pt from the external data array. More...

unsigned	ninternal_data () const
	Return the number of internal data objects. More...

unsigned	nexternal_data () const
	Return the number of external data objects. More...

unsigned	ndof () const
	Return the number of equations/dofs in the element. More...

void	dof_vector (const unsigned &t, Vector< double > &dof)
	Return the vector of dof values at time level t. More...

void	dof_pt_vector (Vector< double * > &dof_pt)
	Return the vector of pointers to dof values. More...

void	set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)

void	assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)

void	describe_dofs (std::ostream &out, const std::string &current_string) const

void	add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)

virtual void	assign_local_eqn_numbers (const bool &store_local_dof_pt)

virtual void	complete_setup_of_dependencies ()

virtual void	get_residuals (Vector< double > &residuals)

virtual void	get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

virtual void	get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)

virtual void	get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)

virtual void	get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)

virtual void	get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)

virtual void	get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)

virtual void	get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)

virtual void	get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)

virtual void	get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)

virtual void	compute_norm (Vector< double > &norm)

virtual void	compute_norm (double &norm)

virtual unsigned	ndof_types () const

virtual void	get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const

Public Member Functions inherited from oomph::GeomObject
	GeomObject ()
	Default constructor. More...

	GeomObject (const unsigned &ndim)

	GeomObject (const unsigned &nlagrangian, const unsigned &ndim)

	GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)

	GeomObject (const GeomObject &dummy)=delete
	Broken copy constructor. More...

void	operator= (const GeomObject &)=delete
	Broken assignment operator. More...

virtual	~GeomObject ()
	(Empty) destructor More...

unsigned	nlagrangian () const
	Access function to # of Lagrangian coordinates. More...

unsigned	ndim () const
	Access function to # of Eulerian coordinates. More...

void	set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
	Set # of Lagrangian and Eulerian coordinates. More...

TimeStepper *&	time_stepper_pt ()

TimeStepper *	time_stepper_pt () const

virtual void	position (const double &t, const Vector< double > &zeta, Vector< double > &r) const

virtual void	dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const

virtual void	d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const

virtual void	d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const

Protected Member Functions
void	assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)

void	assign_external_interaction_data_local_eqn_numbers (const bool &store_local_dof_pt)

void	fill_in_jacobian_from_external_interaction_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_by_fd (DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_field_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_field_by_fd (DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_geometric_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_external_interaction_geometric_by_fd (DenseMatrix< double > &jacobian)

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

virtual void	update_before_external_interaction_field_fd ()

virtual void	reset_after_external_interaction_field_fd ()

virtual void	update_in_external_interaction_field_fd (const unsigned &i)

virtual void	reset_in_external_interaction_field_fd (const unsigned &i)

virtual void	update_before_external_interaction_geometric_fd ()

virtual void	reset_after_external_interaction_geometric_fd ()

virtual void	update_in_external_interaction_geometric_fd (const unsigned &i)

virtual void	reset_in_external_interaction_geometric_fd (const unsigned &i)

Protected Member Functions inherited from oomph::FiniteElement
virtual void	assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const

virtual void	assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const

virtual void	assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const

template<unsigned DIM>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

virtual double	invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

virtual double	local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

double	local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const

virtual double	local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

virtual void	dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<unsigned DIM>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

virtual void	d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<unsigned DIM>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

virtual void	transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const

void	transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const

virtual void	transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<unsigned DIM>
void	transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<unsigned DIM>
void	transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

virtual void	fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)

void	fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)

virtual void	update_before_nodal_fd ()

virtual void	reset_after_nodal_fd ()

virtual void	update_in_nodal_fd (const unsigned &i)

virtual void	reset_in_nodal_fd (const unsigned &i)

void	fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
	Zero-d specialisation of function to calculate inverse of jacobian mapping. More...

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
	One-d specialisation of function to calculate inverse of jacobian mapping. More...

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
	Two-d specialisation of function to calculate inverse of jacobian mapping. More...

template<>
double	invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const

template<>
void	transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<>
void	transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<>
void	transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

template<>
void	transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const

Protected Member Functions inherited from oomph::GeneralisedElement
unsigned	add_internal_data (Data *const &data_pt, const bool &fd=true)

bool	internal_data_fd (const unsigned &i) const

void	exclude_internal_data_fd (const unsigned &i)

void	include_internal_data_fd (const unsigned &i)

void	clear_global_eqn_numbers ()

void	add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)

virtual void	assign_additional_local_eqn_numbers ()

int	internal_local_eqn (const unsigned &i, const unsigned &j) const

int	external_local_eqn (const unsigned &i, const unsigned &j)

virtual void	fill_in_contribution_to_residuals (Vector< double > &residuals)

void	fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

void	fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

void	fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

void	fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)

virtual void	update_before_internal_fd ()

virtual void	reset_after_internal_fd ()

virtual void	update_in_internal_fd (const unsigned &i)

virtual void	reset_in_internal_fd (const unsigned &i)

virtual void	update_before_external_fd ()

virtual void	reset_after_external_fd ()

virtual void	update_in_external_fd (const unsigned &i)

virtual void	reset_in_external_fd (const unsigned &i)

virtual void	fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)

virtual void	fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)

virtual void	fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)

virtual void	fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)

virtual void	fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)

virtual void	fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)

virtual void	fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)

virtual void	fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)

Protected Attributes
bool	Add_external_interaction_data
	Boolean flag to indicate whether to include the external data. More...

bool	Add_external_geometric_data
	Boolean flag to indicate whether to include the external geometric data. More...

Data **	External_interaction_field_data_pt

Data **	External_interaction_geometric_data_pt

Protected Attributes inherited from oomph::FiniteElement
MacroElement *	Macro_elem_pt
	Pointer to the element's macro element (NULL by default) More...

Protected Attributes inherited from oomph::GeomObject
unsigned	NLagrangian
	Number of Lagrangian (intrinsic) coordinates. More...

unsigned	Ndim
	Number of Eulerian coordinates. More...

TimeStepper *	Geom_object_time_stepper_pt

Private Member Functions
void	check_storage_allocated () const
	Helper function to check that storage has actually been allocated. More...

void	range_check (const unsigned &interaction_index, const unsigned &ipt) const
	Helper function for range checking in the access functions. More...

Private Attributes
unsigned	Ninteraction
	Number of interactions. More...

unsigned	Nintpt
	Number of intergation point in the element. More...

unsigned	Nexternal_element_storage

unsigned	Nexternal_interaction_field_data
	Number of external interaction field data. More...

unsigned	Nexternal_interaction_geometric_data
	Number of external interaction geometric data. More...

FiniteElement **	External_element_pt

Vector< double > *	External_element_local_coord

unsigned *	External_interaction_field_data_index

int *	External_interaction_field_data_local_eqn

unsigned *	External_interaction_geometric_data_index

int *	External_interaction_geometric_data_local_eqn

Additional Inherited Members
Public Types inherited from oomph::FiniteElement
typedef void(*	SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)

typedef void(*	UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)

Static Public Attributes inherited from oomph::FiniteElement
static double	Tolerance_for_singular_jacobian = 1.0e-16
	Tolerance below which the jacobian is considered singular. More...

static bool	Accept_negative_jacobian = false

static bool	Suppress_output_while_checking_for_inverted_elements

Static Public Attributes inherited from oomph::GeneralisedElement
static bool	Suppress_warning_about_repeated_internal_data

static bool	Suppress_warning_about_repeated_external_data = true

static double	Default_fd_jacobian_step = 1.0e-8

Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned	Default_Initial_Nvalue = 0
	Default value for the number of values at a node. More...

static const double	Node_location_tolerance = 1.0e-14

static const unsigned	N2deriv [] = {0, 1, 3, 6}

Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< double >	Dummy_matrix

static std::deque< double * >	Dof_pt_deque

Detailed Description

This is a base class for all elements that require external sources (e.g. FSI, multi-domain problems such as Helmholtz, multi-mesh Boussinesq convection, etc.). It provides storage for the source element and corresponding local coordinate at each integration point, and allows use of locate_zeta to obtain such source elements. In addition separate storage is allocated for all field data in the external elements and all geometric data that can affect the field data in the external elements. Generic finite difference routines are provided to calculate entries in the Jacobian from the data of the external elements.

Constructor & Destructor Documentation

◆ ElementWithExternalElement() [1/2]

oomph::ElementWithExternalElement::ElementWithExternalElement ( )

inline

Constructor. Initialise member data and pointers to data associated with the external elements to zero.

       : FiniteElement(),
         Add_external_interaction_data(true),
         Add_external_geometric_data(true),
         External_interaction_field_data_pt(0),
         External_interaction_geometric_data_pt(0),
         Ninteraction(0),
         Nintpt(0),
         Nexternal_element_storage(0),
         Nexternal_interaction_field_data(0),
         Nexternal_interaction_geometric_data(0),
         External_element_pt(0),
         External_element_local_coord(0),
         External_interaction_field_data_index(0),
         External_interaction_field_data_local_eqn(0),
         External_interaction_geometric_data_index(0),
         External_interaction_geometric_data_local_eqn(0)
     {
     }

◆ ~ElementWithExternalElement()

oomph::ElementWithExternalElement::~ElementWithExternalElement ( )

virtual

The destructor, clean up any allocated memory.

Destructor, clean up any memory allocated for the equation numbering schemes and storage for the external elements

   {
     // If storage has been allocated for external geometric data,
     // delete it
     if (External_interaction_geometric_data_local_eqn)
     {
       delete[] External_interaction_geometric_data_local_eqn;
     }
     if (External_interaction_geometric_data_index)
     {
       delete[] External_interaction_geometric_data_index;
     }
     if (External_interaction_geometric_data_pt)
     {
       delete[] External_interaction_geometric_data_pt;
     }
  
     // If storage has been allocated for external field data,
     // delete it
     if (External_interaction_field_data_local_eqn)
     {
       delete[] External_interaction_field_data_local_eqn;
     }
     if (External_interaction_field_data_index)
     {
       delete[] External_interaction_field_data_index;
     }
     if (External_interaction_field_data_pt)
     {
       delete[] External_interaction_field_data_pt;
     }
  
     // Flush the storage associated with the external elements
     this->flush_all_external_element_storage();
   }

References External_interaction_field_data_index, External_interaction_field_data_local_eqn, External_interaction_field_data_pt, External_interaction_geometric_data_index, External_interaction_geometric_data_local_eqn, External_interaction_geometric_data_pt, and flush_all_external_element_storage().

◆ ElementWithExternalElement() [2/2]

oomph::ElementWithExternalElement::ElementWithExternalElement ( const ElementWithExternalElement & )

delete

Broken copy constructor.

Member Function Documentation

◆ add_external_geometric_data()

bool oomph::ElementWithExternalElement::add_external_geometric_data ( )

inline

Are we including external geometric data in the element's Jacobian.

     {
       return Add_external_geometric_data;
     }

References Add_external_geometric_data.

Referenced by oomph::ProjectableElement< ELEMENT >::enable_projection().

◆ add_external_interaction_data()

bool oomph::ElementWithExternalElement::add_external_interaction_data ( )

inline

Are we including external data in the element's Jacobian.

     {
       return Add_external_interaction_data;
     }

References Add_external_interaction_data.

Referenced by oomph::ProjectableElement< ELEMENT >::enable_projection().

◆ assign_external_interaction_data_local_eqn_numbers()

void oomph::ElementWithExternalElement::assign_external_interaction_data_local_eqn_numbers ( const bool & store_local_dof_pt )

protected

Assign the local equation numbers for those Data values involved in the external interactions that affect the residuals of the element

This function determines the all Data in external elemetns that affects the residuals of the element and adds their global equation numbers to the local-to-global look-up scheme. Note that we only include Data items into the element's External_interaction_data if they are not already included in the element's nodal positional Data, its internal or external Data.

   {
     // Reset number of stored field data to zero
     Nexternal_interaction_field_data = 0;
     // Clear all the internal field data storage, if it's been allocated
     if (External_interaction_field_data_pt)
     {
       delete[] External_interaction_field_data_pt;
       External_interaction_field_data_pt = 0;
     }
     if (External_interaction_field_data_index)
     {
       delete[] External_interaction_field_data_index;
       External_interaction_field_data_index = 0;
     }
     if (External_interaction_field_data_local_eqn)
     {
       delete[] External_interaction_field_data_local_eqn;
       External_interaction_field_data_local_eqn = 0;
     }
  
     // Reset number of stored geometric data to zero
     Nexternal_interaction_geometric_data = 0;
     // Clear all internal external data storage, if it's been allocated
     if (External_interaction_geometric_data_pt)
     {
       delete[] External_interaction_geometric_data_pt;
       External_interaction_geometric_data_pt = 0;
     }
     if (External_interaction_geometric_data_index)
     {
       delete[] External_interaction_geometric_data_index;
       External_interaction_geometric_data_index = 0;
     }
     if (External_interaction_geometric_data_local_eqn)
     {
       delete[] External_interaction_geometric_data_local_eqn;
       External_interaction_geometric_data_local_eqn = 0;
     }
  
     // Only bother with non-halo elements
 #ifdef OOMPH_HAS_MPI
     if (!this->is_halo())
 #endif
     {
       // If desired, determine the Data that affects the interactions but is not
       // already included in elements other generic Data.
       // The conditional test is done here, so that the vectors are cleared
       // and not re-filled if Add_external_interaction_data is false
       if (Add_external_interaction_data)
       {
         // Number of interactions
         const unsigned n_interaction = this->ninteraction();
         // Number of integration points
         const unsigned n_intpt = integral_pt()->nweight();
  
         // Sets of all (external) FiniteElements that affect the interactions
         // One set per interaction
         Vector<std::set<FiniteElement*>> external_interaction_elements_pt(
           n_interaction);
  
         // Loop over the interactions
         for (unsigned i = 0; i < n_interaction; i++)
         {
           // Loop over the integration points and the adjacent element at
           // each integration point to the set
           for (unsigned ipt = 0; ipt < n_intpt; ipt++)
           {
             // Add the element adjacent to the element into the set
             external_interaction_elements_pt[i].insert(
               external_element_pt(i, ipt));
           }
           // For safety erase any null pointers
           external_interaction_elements_pt[i].erase(0);
         }
  
         // Storage for a pairs of interaction data (pointer to Data and the
         // index of the value within this Data object) affecting the element.
         std::set<std::pair<Data*, unsigned>> paired_field_data;
  
         // Determine the field data that affects the external interactions
         // for all sets of external elements
         identify_all_field_data_for_external_interaction(
           external_interaction_elements_pt, paired_field_data);
  
         // It's just possible that some of the field data could be internal
         // or nodal data, so we should remove it if that's the case
         // Loop over all internal data
         const unsigned n_internal = this->ninternal_data();
         for (unsigned n = 0; n < n_internal; n++)
         {
           // Cache the data pointer
           Data* const dat_pt = this->internal_data_pt(n);
           // Find the number of data values stored in the data object
           const unsigned n_value = dat_pt->nvalue();
           // Add the index of each data value and the pointer to the set
           // of pairs
           for (unsigned i = 0; i < n_value; i++)
           {
             paired_field_data.erase(std::make_pair(dat_pt, i));
           }
         }
  
         // Loop over all the nodes
         const unsigned n_node = this->nnode();
         for (unsigned n = 0; n < n_node; n++)
         {
           // Find the node point
           Node* const nod_pt = this->node_pt(n);
           // Find the number of values stored at the node
           const unsigned n_value = nod_pt->nvalue();
           // Loop over values and erase all pairs from the set
           for (unsigned i = 0; i < n_value; i++)
           {
             paired_field_data.erase(std::make_pair(nod_pt, i));
           }
           SolidNode* solid_nod_pt = dynamic_cast<SolidNode*>(nod_pt);
           if (solid_nod_pt != 0)
           {
             Data* pos_data_pt = solid_nod_pt->variable_position_pt();
             // Find the number of positional values stored at the node
             const unsigned n_value = pos_data_pt->nvalue();
             // Loop over values and erase all pairs from the set
             for (unsigned i = 0; i < n_value; i++)
             {
               paired_field_data.erase(std::make_pair(pos_data_pt, i));
             }
           }
         }
  
         // Now allocate storage for the external field data
         // associated indices and local equation numbers
         const unsigned n_external_interaction_field_data =
           paired_field_data.size();
         Nexternal_interaction_field_data = n_external_interaction_field_data;
         External_interaction_field_data_pt =
           new Data*[n_external_interaction_field_data];
         External_interaction_field_data_index =
           new unsigned[n_external_interaction_field_data];
  
         // Add the pairs of data to the field data vectors
         {
           unsigned count = 0;
           for (std::set<std::pair<Data*, unsigned>>::iterator it =
                  paired_field_data.begin();
                it != paired_field_data.end();
                it++)
           {
             External_interaction_field_data_pt[count] = it->first;
             External_interaction_field_data_index[count] = it->second;
             ++count;
           }
         }
  
  
         // Only bother to add geometric data if we're told to
         if (Add_external_geometric_data)
         {
           // Storage for a set of external geometric Data affecting the element
           std::set<Data*> external_geometric_data_pt;
  
           // Determine the geometric data that affects the external interactions
           // for all sets of external elements
           identify_all_geometric_data_for_external_interaction(
             external_interaction_elements_pt, external_geometric_data_pt);
  
           // Now loop over any geometric data of the Element itself
           // and erase them from the external_geometric_data_pt
           // because these data are actually intrinsic
           // data of this element and are counted and numbered elsewhere
           unsigned n_geom_data = ngeom_data();
           for (unsigned j = 0; j < n_geom_data; j++)
           {
             external_geometric_data_pt.erase(geom_data_pt(j));
           }
  
           // It is possible that the geometric data may have already been added
           // as external data. We should erase any common entries from the
           // External_interaction_data
           // but not touch the external data that has been set up by a
           //"knowledgeable" user
           unsigned n_external = nexternal_data();
           for (unsigned j = 0; j < n_external; j++)
           {
             external_geometric_data_pt.erase(external_data_pt(j));
           }
  
           // Loop over all the nodes of present element to avoid double counting
           const unsigned n_node = this->nnode();
           for (unsigned n = 0; n < n_node; n++)
           {
             Node* const nod_pt = this->node_pt(n);
             external_geometric_data_pt.erase(nod_pt);
  
             SolidNode* solid_nod_pt = dynamic_cast<SolidNode*>(nod_pt);
             if (solid_nod_pt != 0)
             {
               Data* pos_data_pt = solid_nod_pt->variable_position_pt();
               //          std::ostringstream junk;
               //          junk << "Erasing ";
               //          unsigned nval=pos_data_pt->nvalue();
               //          for (unsigned i=0;i<nval;i++)
               //           {
               //            junk << pos_data_pt->eqn_number(i) << " ";
               //           }
               //          oomph_info << junk.str() << std::endl;
               external_geometric_data_pt.erase(pos_data_pt);
             }
           }
  
  
           // Next allocate storage for the geometric field data
           // Find out how many individual data we have
           unsigned n_external_interaction_geometric_data = 0;
           for (std::set<Data*>::iterator it =
                  external_geometric_data_pt.begin();
                it != external_geometric_data_pt.end();
                it++)
           {
             // Add the number of values stored in each geometric datum
             n_external_interaction_geometric_data += (*it)->nvalue();
           }
  
           // Now allocate storage
           Nexternal_interaction_geometric_data =
             n_external_interaction_geometric_data;
           External_interaction_geometric_data_pt =
             new Data*[n_external_interaction_geometric_data];
           External_interaction_geometric_data_index =
             new unsigned[n_external_interaction_geometric_data];
  
           // Now we can add all the geometric data to the geometric data vectors
           {
             unsigned count = 0;
             for (std::set<Data*>::iterator it =
                    external_geometric_data_pt.begin();
                  it != external_geometric_data_pt.end();
                  it++)
             {
               // Find the number of values stored in the geometric data
               unsigned n_value = (*it)->nvalue();
               // Loop over the values
               for (unsigned j = 0; j < n_value; j++)
               {
                 // Add data to the external geometric data
                 External_interaction_geometric_data_pt[count] = *it;
                 External_interaction_geometric_data_index[count] = j;
                 ++count;
               }
             }
           }
         }
       }
  
       // All external interaction data has now been specified
  
       // Find the number of external field data
       const unsigned n_external_field_data = nexternal_interaction_field_data();
  
       // If there are interaction data fill in the internal storage
       if (n_external_field_data > 0)
       {
         // Allocate storage for the local equation numbers associated with
         // external field data
         External_interaction_field_data_local_eqn =
           new int[n_external_field_data];
  
         // Find the number of local equations assigned so far
         unsigned local_eqn_number = ndof();
  
         // A local queue to store the global equation numbers
         std::deque<unsigned long> global_eqn_number_queue;
  
         // Now loop over the field data again to assign local equation numbers
         for (unsigned i = 0; i < n_external_field_data; i++)
         {
           // Get the GLOBAL equation number
           long eqn_number = External_interaction_field_data_pt[i]->eqn_number(
             External_interaction_field_data_index[i]);
  
           // If the GLOBAL equation number is positive (i.e. not pinned)
           if (eqn_number >= 0)
           {
             //        std::ostringstream junk;
             //        junk << "Adding global eqn " << eqn_number << " (";
             //        if (!(External_interaction_field_data_pt[i]->is_halo()))
             //         {
             //          junk << "not";
             //         }
             //        oomph_info << junk.str() << " halo" << std::endl;
  
             // Add the GLOBAL equation number to the local queue
             global_eqn_number_queue.push_back(eqn_number);
             // Add pointer to the dof to the queue if required
             if (store_local_dof_pt)
             {
               GeneralisedElement::Dof_pt_deque.push_back(
                 External_interaction_field_data_pt[i]->value_pt(
                   External_interaction_field_data_index[i]));
             }
  
             // Add the local equation number to the local scheme
             External_interaction_field_data_local_eqn[i] = local_eqn_number;
             // Increase the local number
             local_eqn_number++;
           }
           else
           {
             // Set the local scheme to be pinned
             External_interaction_field_data_local_eqn[i] = Data::Is_pinned;
           }
         }
         // Now add our global equations numbers to the internal element storage
         add_global_eqn_numbers(global_eqn_number_queue,
                                GeneralisedElement::Dof_pt_deque);
         // Clear the memory used in the deque
         if (store_local_dof_pt)
         {
           std::deque<double*>().swap(GeneralisedElement::Dof_pt_deque);
         }
       }
  
       // Find the number of external geometric data
       unsigned n_external_geom_data = nexternal_interaction_geometric_data();
  
       // If there are external geometric data fill in the internal storage
       if (n_external_geom_data > 0)
       {
         // Allocate storage for the local equation numbers associated with
         // external geometric data
         External_interaction_geometric_data_local_eqn =
           new int[n_external_geom_data];
  
         // Find the number of local equations assigned so far
         unsigned local_eqn_number = ndof();
  
         // A local queue to store the global equation numbers
         std::deque<unsigned long> global_eqn_number_queue;
  
         // Now loop over the field data again assign local equation numbers
         for (unsigned i = 0; i < n_external_geom_data; i++)
         {
           // Get the GLOBAL equation number
           long eqn_number =
             External_interaction_geometric_data_pt[i]->eqn_number(
               External_interaction_geometric_data_index[i]);
  
           // If the GLOBAL equation number is positive (a free variable)
           if (eqn_number >= 0)
           {
             // Add the GLOBAL equation number to the local queue
             global_eqn_number_queue.push_back(eqn_number);
             // Add pointer to the dof to the queue if required
             if (store_local_dof_pt)
             {
               GeneralisedElement::Dof_pt_deque.push_back(
                 External_interaction_geometric_data_pt[i]->value_pt(
                   External_interaction_geometric_data_index[i]));
             }
  
             // Add the local equation number to the local scheme
             External_interaction_geometric_data_local_eqn[i] = local_eqn_number;
             // Increase the local number
             local_eqn_number++;
           }
           else
           {
             // Set the local scheme to be pinned
             External_interaction_geometric_data_local_eqn[i] = Data::Is_pinned;
           }
         }
         // Now add our global equations numbers to the internal element storage
         add_global_eqn_numbers(global_eqn_number_queue,
                                GeneralisedElement::Dof_pt_deque);
         // Clear the memory used in the deque
         if (store_local_dof_pt)
         {
           std::deque<double*>().swap(GeneralisedElement::Dof_pt_deque);
         }
       }
     }
   }

Referenced by assign_internal_and_external_local_eqn_numbers().

◆ assign_internal_and_external_local_eqn_numbers()

void oomph::ElementWithExternalElement::assign_internal_and_external_local_eqn_numbers ( const bool & store_local_dof_pt )

inlineprotectedvirtual

Overload the assign internal and external local equation number scheme so that the interaction data is taken into account

Reimplemented from oomph::GeneralisedElement.

     {
       // Call the external stuff first so that it is near the front of the
       // list for fast searches when using indexing by global dof for
       // analytic calculation of interaction blocks.
       this->assign_external_interaction_data_local_eqn_numbers(
         store_local_dof_pt);
       // Now call the underlying equation numbering
       GeneralisedElement::assign_internal_and_external_local_eqn_numbers(
         store_local_dof_pt);
     }

References assign_external_interaction_data_local_eqn_numbers(), and oomph::GeneralisedElement::assign_internal_and_external_local_eqn_numbers().

◆ check_storage_allocated()

void oomph::ElementWithExternalElement::check_storage_allocated ( ) const

inlineprivate

Helper function to check that storage has actually been allocated.

     {
       // If either of the storage arrays is zero, then storage has not
       // yet been allocated. Both arrays are allocated at once, so
       // if one is zero both will (should) be
       if ((External_element_pt == 0) || (External_element_local_coord == 0))
       {
         std::ostringstream error_stream;
         error_stream
           << "Storage for the external elements has not been allocated.\n"
           << "initialise_external_element_storage() must be called.\n"
           << "This tends to be done automatically during the multi-domain\n"
           << "setup procedures -- you're most likely to get this error\n"
           << "because you have not specified the number of interactions\n"
           << "that your ElementWithExternalElement is involved in.\n"
           << "You ought to specify this with a call to\n\n"
           << "     ElementWithExternalElement::set_ninteraction(...)\n\n";
         throw OomphLibError(
           error_stream.str(), OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION);
       }
     }

References External_element_local_coord, External_element_pt, OOMPH_CURRENT_FUNCTION, and OOMPH_EXCEPTION_LOCATION.

Referenced by external_element_local_coord(), and external_element_pt().

◆ describe_local_dofs()

void oomph::ElementWithExternalElement::describe_local_dofs	(	std::ostream &	out,
		const std::string &	current_string
	)		const

virtual

Function to describe the local dofs of the element. The ostream specifies the output stream to which the description is written; the string stores the currently assembled output that is ultimately written to the output stream by Data::describe_dofs(...); it is typically built up incrementally as we descend through the call hierarchy of this function when called from Problem::describe_dofs(...)

Reimplemented from oomph::FiniteElement.

   {
     // Find the number of external field data
     const unsigned n_external_field_data = nexternal_interaction_field_data();
     // Now loop over the field data again to assign local equation numbers
     for (unsigned i = 0; i < n_external_field_data; i++)
     {
       std::stringstream conversion;
       conversion << " of External Interaction Field Data " << i
                  << current_string;
       std::string in(conversion.str());
       External_interaction_field_data_pt[i]->describe_dofs(out, in);
     }
  
     // Find the number of external geometric data
     unsigned n_external_geom_data = nexternal_interaction_geometric_data();
  
     // Now loop over the field data again assign local equation numbers
     for (unsigned i = 0; i < n_external_geom_data; i++)
     {
       std::stringstream conversion;
       conversion << " of External Interaction Geometric Data " << i
                  << current_string;
       std::string in(conversion.str());
       External_interaction_geometric_data_pt[i]->describe_dofs(out, in);
     }
     GeneralisedElement::describe_local_dofs(out, current_string);
   }

References oomph::Data::describe_dofs(), oomph::GeneralisedElement::describe_local_dofs(), External_interaction_field_data_pt, External_interaction_geometric_data_pt, i, nexternal_interaction_field_data(), nexternal_interaction_geometric_data(), out(), and oomph::Global_string_for_annotation::string().

Referenced by oomph::FaceElementAsGeomObject< ELEMENT >::describe_local_dofs(), oomph::ProjectableElement< ELEMENT >::describe_local_dofs(), and oomph::FSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::describe_local_dofs().

◆ external_element_local_coord() [1/2]

Vector<double>& oomph::ElementWithExternalElement::external_element_local_coord	(	const unsigned &	interaction_index,
		const unsigned &	ipt
	)

inline

Access function to get source element's local coords for specified interaction index at specified integration point

     {
 #ifdef PARANOID
       check_storage_allocated();
 #endif
 #ifdef RANGE_CHECKING
       range_check(interaction_index, ipt);
 #endif
       return External_element_local_coord[Nintpt * interaction_index + ipt];
     }

References check_storage_allocated(), External_element_local_coord, Nintpt, and range_check().

◆ external_element_local_coord() [2/2]

Vector<double> const& oomph::ElementWithExternalElement::external_element_local_coord	(	const unsigned &	interaction_index,
		const unsigned &	ipt
	)		const

inline

Access function to get source element's coords, const version.

     {
 #ifdef PARANOID
       check_storage_allocated();
 #endif
 #ifdef RANGE_CHECKING
       range_check(interaction_index, ipt);
 #endif
       return External_element_local_coord[Nintpt * interaction_index + ipt];
     }

References check_storage_allocated(), External_element_local_coord, Nintpt, and range_check().

◆ external_element_pt() [1/2]

FiniteElement*& oomph::ElementWithExternalElement::external_element_pt	(	const unsigned &	interaction_index,
		const unsigned &	ipt
	)

inline

Access function to source element for specified interaction index at specified integration point

     {
 #ifdef PARANOID
       check_storage_allocated();
 #endif
 #ifdef RANGE_CHECKING
       range_check(interaction_index, ipt);
 #endif
       // Return the appropriate entry in the storage array
       return External_element_pt[Nintpt * interaction_index + ipt];
     }

References check_storage_allocated(), External_element_pt, Nintpt, and range_check().

◆ external_element_pt() [2/2]

FiniteElement* const& oomph::ElementWithExternalElement::external_element_pt	(	const unsigned &	interaction_index,
		const unsigned &	ipt
	)		const

inline

Access function to source element, const version.

     {
 #ifdef PARANOID
       check_storage_allocated();
 #endif
 #ifdef RANGE_CHECKING
       range_check(interaction_index, ipt);
 #endif
       // Return the appropriate entry in the storage array
       return External_element_pt[Nintpt * interaction_index + ipt];
     }

References check_storage_allocated(), External_element_pt, Nintpt, and range_check().

◆ external_geometric_data_is_included()

bool oomph::ElementWithExternalElement::external_geometric_data_is_included ( ) const

inline

Is the external geometric data taken into account when forming the Jacobian?

     {
       return Add_external_geometric_data;
     }

References Add_external_geometric_data.

Referenced by RefineableQAxisymCrouzeixRaviartBoussinesqElement::further_build(), and oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::further_build().

◆ external_interaction_field_data_pt()

Vector<Data*> oomph::ElementWithExternalElement::external_interaction_field_data_pt ( ) const

inline

Return vector of pointers to the field Data objects that affect the interactions on the element.

     {
       // Find out how many external field data there are
       const unsigned n_external_interaction_field_data =
         nexternal_interaction_field_data();
       // Create and populate  a temporary vector
       Vector<Data*> temp_data(n_external_interaction_field_data);
       for (unsigned i = 0; i < n_external_interaction_field_data; i++)
       {
         temp_data[i] = External_interaction_field_data_pt[i];
       }
       // Return the temporary data
       return temp_data;
     }

References External_interaction_field_data_pt, i, and nexternal_interaction_field_data().

Referenced by oomph::GeneralisedElement::assign_local_eqn_numbers(), and oomph::FSI_functions::doc_fsi().

◆ external_interaction_geometric_data_pt()

Vector<Data*> oomph::ElementWithExternalElement::external_interaction_geometric_data_pt ( ) const

inline

Return vector of pointers to the geometric Data objects that affect the interactions on the element.

     {
       // Find out how many external field data there are
       const unsigned n_external_interaction_geometric_data =
         nexternal_interaction_geometric_data();
       // Create and populate  a temporary vector
       Vector<Data*> temp_data(n_external_interaction_geometric_data);
       for (unsigned i = 0; i < n_external_interaction_geometric_data; i++)
       {
         temp_data[i] = External_interaction_geometric_data_pt[i];
       }
       // Return the temporary data
       return temp_data;
     }

References External_interaction_geometric_data_pt, i, and nexternal_interaction_geometric_data().

Referenced by oomph::GeneralisedElement::assign_local_eqn_numbers(), and oomph::FSI_functions::doc_fsi().

◆ fill_in_contribution_to_jacobian()

void oomph::ElementWithExternalElement::fill_in_contribution_to_jacobian	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

inlineprotectedvirtual

Fill in the element's contribution to the Jacobian matrix and the residual vector: Done by finite differencing the residual vector w.r.t. all nodal, internal, external and load Data.

Reimplemented from oomph::GeneralisedElement.

     {
       // Add the contribution to the residuals
       fill_in_contribution_to_residuals(residuals);
       // Allocate storage for the full residuals  (residuals of entire element)
       const unsigned n_dof = this->ndof();
       Vector<double> full_residuals(n_dof);
       // Get the residuals for the entire element
       get_residuals(full_residuals);
       // Add the internal and external by finite differences
       fill_in_jacobian_from_internal_by_fd(full_residuals, jacobian);
       fill_in_jacobian_from_external_by_fd(full_residuals, jacobian);
       fill_in_jacobian_from_nodal_by_fd(full_residuals, jacobian);
       fill_in_jacobian_from_external_interaction_by_fd(full_residuals,
                                                        jacobian);
     }

References oomph::GeneralisedElement::fill_in_contribution_to_residuals(), oomph::GeneralisedElement::fill_in_jacobian_from_external_by_fd(), fill_in_jacobian_from_external_interaction_by_fd(), oomph::GeneralisedElement::fill_in_jacobian_from_internal_by_fd(), oomph::FiniteElement::fill_in_jacobian_from_nodal_by_fd(), oomph::GeneralisedElement::get_residuals(), and oomph::GeneralisedElement::ndof().

Referenced by QAxisymCrouzeixRaviartElementWithExternalElement::fill_in_contribution_to_jacobian(), QAxisymAdvectionDiffusionElementWithExternalElement::fill_in_contribution_to_jacobian(), QCrouzeixRaviartElementWithTwoExternalElement< DIM >::fill_in_contribution_to_jacobian(), QAdvectionDiffusionElementWithExternalElement< DIM >::fill_in_contribution_to_jacobian(), oomph::NavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_contribution_to_jacobian(), and oomph::AdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >::fill_in_contribution_to_jacobian().

◆ fill_in_jacobian_from_external_interaction_by_fd() [1/2]

void oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_by_fd ( DenseMatrix< double > & jacobian )

inlineprotected

Calculate the contributions to the jacobian from all enternal interaction degrees of freedom (geometric and field data) in the external element using finite differences. This version computes the residuals vector before calculating the jacobian terms.

     {
       const unsigned n_dof = this->ndof();
       // Allocate storage for the residuals
       Vector<double> residuals(n_dof, 0.0);
       // Get the residuals for the entire element
       get_residuals(residuals);
       // Call the jacobian calculation
       fill_in_jacobian_from_external_interaction_by_fd(residuals, jacobian);
     }

References fill_in_jacobian_from_external_interaction_by_fd(), oomph::GeneralisedElement::get_residuals(), and oomph::GeneralisedElement::ndof().

◆ fill_in_jacobian_from_external_interaction_by_fd() [2/2]

void oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_by_fd	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

inlineprotected

Calculate the contributions to the jacobian from all external interaction degrees of freedom (geometric and field data) in the external element using finite differences. This version of the function assumes that the residuals vector has already been calculated.

     {
       // Get the contribution from the external field data
       fill_in_jacobian_from_external_interaction_field_by_fd(residuals,
                                                              jacobian);
       // Get the contribution from the external geometric data
       fill_in_jacobian_from_external_interaction_geometric_by_fd(residuals,
                                                                  jacobian);
     }

References fill_in_jacobian_from_external_interaction_field_by_fd(), and fill_in_jacobian_from_external_interaction_geometric_by_fd().

◆ fill_in_jacobian_from_external_interaction_field_by_fd() [1/2]

void oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_field_by_fd ( DenseMatrix< double > & jacobian )

inlineprotected

Calculate the contributions to the jacobian from the enternal interaction degrees of freedom associated with fields interpolated by the external element using finite differences. This version computes the residuals vector before calculating the jacobian terms.

     {
       const unsigned n_dof = this->ndof();
       // Allocate storage for the residuals
       Vector<double> residuals(n_dof, 0.0);
       // Get the residuals for the entire element
       get_residuals(residuals);
       // Call the jacobian calculation
       fill_in_jacobian_from_external_interaction_field_by_fd(residuals,
                                                              jacobian);
     }

References fill_in_jacobian_from_external_interaction_field_by_fd(), oomph::GeneralisedElement::get_residuals(), and oomph::GeneralisedElement::ndof().

◆ fill_in_jacobian_from_external_interaction_field_by_fd() [2/2]

void oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_field_by_fd	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

protected

Calculate the contributions to the jacobian from the external interaction degrees of freedom associated with fields interpolated by the external element using finite differences. This version of the function assumes that the residuals vector has already been calculated.

This function calculates the entries of Jacobian matrix, used in the Newton method, associated with the external interaction degrees of freedom for external fields. It does this using finite differences, rather than an analytical formulation, so can be done in total generality.

   {
     // Locally cache the number of data
     const unsigned n_external_interaction_field_data =
       nexternal_interaction_field_data();
  
     // If there is no such data return
     if (n_external_interaction_field_data == 0)
     {
       return;
     }
  
     // Call the update function to ensure that the element is in a
     // consistent state before finite differencing
     update_before_external_interaction_field_fd();
  
     // Find the number of dofs in the element
     const unsigned n_dof = ndof();
  
     // Create newres vector
     Vector<double> newres(n_dof);
  
     // Integer storage for local unknown
     int local_unknown = 0;
  
     // Use the default finite difference step
     const double fd_step = Default_fd_jacobian_step;
  
     // Loop over the data
     for (unsigned i = 0; i < n_external_interaction_field_data; i++)
     {
       // Find the value of the local unknown
       local_unknown = External_interaction_field_data_local_eqn[i];
       // If it's not a boundary condition
       if (local_unknown >= 0)
       {
         // Store a pointer to the field value
         double* value_pt = External_interaction_field_data_pt[i]->value_pt(
           External_interaction_field_data_index[i]);
  
         // Save the old value of the field value
         double old_var = *value_pt;
  
         // Increment the value
         *value_pt += fd_step;
  
         // Now update any dependent variables
         update_in_external_interaction_field_fd(i);
  
         // Calculate the new residuals
         get_residuals(newres);
  
         // Do forward finite differences
         for (unsigned m = 0; m < n_dof; m++)
         {
           // Stick the entry into the Jacobian matrix
           jacobian(m, local_unknown) = (newres[m] - residuals[m]) / fd_step;
         }
  
         // Reset the variables
         *value_pt = old_var;
  
         // Reset any dependent variables
         reset_in_external_interaction_field_fd(i);
       }
     } // End of loop over external interaction data
  
     // End of finite difference loop
     // Final reset of any dependent data
     reset_after_external_interaction_field_fd();
   }

References oomph::GeneralisedElement::Default_fd_jacobian_step, External_interaction_field_data_index, External_interaction_field_data_local_eqn, External_interaction_field_data_pt, oomph::GeneralisedElement::get_residuals(), i, m, oomph::GeneralisedElement::ndof(), nexternal_interaction_field_data(), reset_after_external_interaction_field_fd(), reset_in_external_interaction_field_fd(), update_before_external_interaction_field_fd(), update_in_external_interaction_field_fd(), and oomph::Data::value_pt().

Referenced by fill_in_jacobian_from_external_interaction_by_fd(), and fill_in_jacobian_from_external_interaction_field_by_fd().

◆ fill_in_jacobian_from_external_interaction_geometric_by_fd() [1/2]

void oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_geometric_by_fd ( DenseMatrix< double > & jacobian )

inlineprotected

Calculate the contributions to the jacobian from the external interaction degrees of freedom associated with the geometry of the external elements using finite differences. This version computes the residuals vector before calculating the jacobian terms.

     {
       const unsigned n_dof = this->ndof();
       // Allocate storage for the residuals
       Vector<double> residuals(n_dof, 0.0);
       // Get the residuals for the entire element
       get_residuals(residuals);
       // Call the jacobian calculation
       fill_in_jacobian_from_external_interaction_geometric_by_fd(residuals,
                                                                  jacobian);
     }

References fill_in_jacobian_from_external_interaction_geometric_by_fd(), oomph::GeneralisedElement::get_residuals(), and oomph::GeneralisedElement::ndof().

◆ fill_in_jacobian_from_external_interaction_geometric_by_fd() [2/2]

void oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_geometric_by_fd	(	Vector< double > &	residuals,
		DenseMatrix< double > &	jacobian
	)

protected

Calculate the contributions to the jacobian from the external interaction degrees of freedom associated with the geometry of the external elements using finite differences. This version of the function assumes that the residuals vector has already been calculated.

This function calculates the entries of Jacobian matrix, used in the Newton method, associated with the external interaction degrees of freedom for external geometric data. It does this using finite differences, rather than an analytical formulation, so can be done in total generality.

   {
     // Locally cache the number of data
     const unsigned n_external_interaction_geometric_data =
       nexternal_interaction_geometric_data();
     // If there is no such data return
     if (n_external_interaction_geometric_data == 0)
     {
       return;
     }
  
     // Call the update function to ensure that the element is in a
     // consistent state before finite differencing
     update_before_external_interaction_geometric_fd();
  
     // Find the number of dofs in the element
     const unsigned n_dof = ndof();
  
     // Create newres vector
     Vector<double> newres(n_dof);
  
     // Integer storage for local unknown
     int local_unknown = 0;
  
     // Use the default finite difference step
     const double fd_step = Default_fd_jacobian_step;
  
     // Loop over the data
     for (unsigned i = 0; i < n_external_interaction_geometric_data; i++)
     {
       // Find the value of the local unknown
       local_unknown = External_interaction_geometric_data_local_eqn[i];
       // If it's not a boundary condition
       if (local_unknown >= 0)
       {
         // Store a pointer to the geometric value
         double* value_pt = External_interaction_geometric_data_pt[i]->value_pt(
           External_interaction_geometric_data_index[i]);
  
         // Save the old value of the geometric value
         double old_var = *value_pt;
  
         // Increment the value
         *value_pt += fd_step;
  
         // Now update any dependent variables
         update_in_external_interaction_geometric_fd(i);
  
         // Calculate the new residuals
         get_residuals(newres);
  
         // Do forward finite differences
         for (unsigned m = 0; m < n_dof; m++)
         {
           // Stick the entry into the Jacobian matrix
           jacobian(m, local_unknown) = (newres[m] - residuals[m]) / fd_step;
         }
  
         // Reset the variables
         *value_pt = old_var;
  
         // Reset any dependent variables
         reset_in_external_interaction_geometric_fd(i);
       }
     } // End of loop over external interaction data
  
     // End of finite difference loop
     // Final reset of any dependent data
     reset_after_external_interaction_geometric_fd();
   }

References oomph::GeneralisedElement::Default_fd_jacobian_step, External_interaction_geometric_data_index, External_interaction_geometric_data_local_eqn, External_interaction_geometric_data_pt, oomph::GeneralisedElement::get_residuals(), i, m, oomph::GeneralisedElement::ndof(), nexternal_interaction_geometric_data(), reset_after_external_interaction_geometric_fd(), reset_in_external_interaction_geometric_fd(), update_before_external_interaction_geometric_fd(), update_in_external_interaction_geometric_fd(), and oomph::Data::value_pt().

Referenced by fill_in_jacobian_from_external_interaction_by_fd(), and fill_in_jacobian_from_external_interaction_geometric_by_fd().

◆ flush_all_external_element_storage()

void oomph::ElementWithExternalElement::flush_all_external_element_storage ( )

Flush the storage for external elements.

Clear the storage for pointers to external elements and their associated local coordinates.

   {
     // Delete the memory if it has been allocated
     if (External_element_pt)
     {
       delete[] External_element_pt;
       External_element_pt = 0;
     }
  
     if (External_element_local_coord)
     {
       delete[] External_element_local_coord;
       External_element_local_coord = 0;
     }
  
     // Reset the number of stored values to zero
     Nexternal_element_storage = 0;
   }

References External_element_local_coord, External_element_pt, and Nexternal_element_storage.

Referenced by ~ElementWithExternalElement().

◆ identify_all_field_data_for_external_interaction()

void oomph::ElementWithExternalElement::identify_all_field_data_for_external_interaction	(	Vector< std::set< FiniteElement * >> const &	external_elements_pt,
		std::set< std::pair< Data *, unsigned >> &	paired_interaction_data
	)

virtual

Function that must return all the data involved in the desired interactions from the external element

Function that must return all the data involved in the desired interactions from the external element Default is to call the identify_field_data_for_interaction() for each element.

Reimplemented in oomph::FSIWallElement, and oomph::RefineableAdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >.

   {
     // Loop over each interaction
     const unsigned n_interaction = this->ninteraction();
     for (unsigned i = 0; i < n_interaction; i++)
     {
       // Loop over each element in the set
       for (std::set<FiniteElement*>::const_iterator it =
              external_elements_pt[i].begin();
            it != external_elements_pt[i].end();
            it++)
       {
         (*it)->identify_field_data_for_interactions(paired_interaction_data);
       }
     } // End of loop over interactions
   }

References i, and ninteraction().

Referenced by assign_external_interaction_data_local_eqn_numbers().

◆ identify_all_geometric_data_for_external_interaction()

void oomph::ElementWithExternalElement::identify_all_geometric_data_for_external_interaction	(	Vector< std::set< FiniteElement * >> const &	external_elements_pt,
		std::set< Data * > &	external_geometric_data_pt
	)

virtual

Function that must return all geometric data involved in the desired interactions from the external element

Function that must return all geometric data involved in the desired interactions from the external element Default is to add all geometric data for each element for each interaction

Reimplemented in oomph::FSIWallElement.

   {
     // Loop over each interaction
     const unsigned n_interaction = this->ninteraction();
     for (unsigned i = 0; i < n_interaction; i++)
     {
       // Loop over each element in the set
       for (std::set<FiniteElement*>::const_iterator it =
              external_elements_pt[i].begin();
            it != external_elements_pt[i].end();
            it++)
       {
         (*it)->identify_geometric_data(external_geometric_data_pt);
       }
     } // End of loop over interactions
   }

References i, and ninteraction().

Referenced by assign_external_interaction_data_local_eqn_numbers().

◆ ignore_external_geometric_data()

void oomph::ElementWithExternalElement::ignore_external_geometric_data ( )

inline

Do not include any external geometric data when computing the element's Jacobian. This function should be called if the external element does not move and/or if the "source term" does not depend on spatial derivatives of the field computed by the other element.

     {
       Add_external_geometric_data = false;
     }

References Add_external_geometric_data.

◆ ignore_external_interaction_data()

void oomph::ElementWithExternalElement::ignore_external_interaction_data ( )

inline

Do not include any external interaction data when computing the element's Jacobian

     {
       Add_external_interaction_data = false;
     }

References Add_external_interaction_data.

◆ include_external_geometric_data()

void oomph::ElementWithExternalElement::include_external_geometric_data ( )

inline

Do include external geometric data when computing the element's Jacobian. This function should be called to re-enable inclusion of external geometric data.

     {
       Add_external_geometric_data = true;
     }

References Add_external_geometric_data.

Referenced by oomph::ProjectableElement< ELEMENT >::disable_projection().

◆ include_external_interaction_data()

void oomph::ElementWithExternalElement::include_external_interaction_data ( )

inline

Do include external geometric data when computing the element's Jacobian This function should be called to re-enable inclusion of external interaction data

     {
       Add_external_interaction_data = true;
     }

References Add_external_interaction_data.

Referenced by oomph::ProjectableElement< ELEMENT >::disable_projection().

◆ initialise_external_element_storage()

void oomph::ElementWithExternalElement::initialise_external_element_storage ( )

Initialise storage for pointers to external elements and their local coordinates. This must be called before any of the access functions are used.

Initialise storage for source elements and their associated local coordinates for the specified number of interactions

   {
     // Find the number of interactions
     const unsigned n_interaction = this->Ninteraction;
     // Find the number of integration points
     const unsigned n_intpt = this->integral_pt()->nweight();
  
     // Work out the required storage
     const unsigned n_external_element_storage = n_interaction * n_intpt;
  
     // If we have not allocated the correct amount of memory,
     // then do so
     if (Nexternal_element_storage != n_external_element_storage)
     {
       // Allocate storage for the pointers to the elements
       // Delete old storage, if needed
       if (External_element_pt)
       {
         delete[] External_element_pt;
       }
       // Allocate new memory
       External_element_pt = new FiniteElement*[n_external_element_storage];
  
       // Initialise all new pointers to zero
       for (unsigned i = 0; i < n_external_element_storage; i++)
       {
         External_element_pt[i] = 0;
       }
  
       // Alloacte storage for local coordinates
       // Delete old storage, if needed
       if (External_element_local_coord)
       {
         delete[] External_element_local_coord;
       }
       // Allocate the new memory
       External_element_local_coord =
         new Vector<double>[n_external_element_storage];
  
       // Finally record how much memory we have allocated
       Nexternal_element_storage = n_external_element_storage;
       Nintpt = n_intpt;
     }
   }

References External_element_local_coord, External_element_pt, i, oomph::FiniteElement::integral_pt(), Nexternal_element_storage, Ninteraction, Nintpt, and oomph::Integral::nweight().

Referenced by oomph::Multi_domain_functions::aux_setup_multi_domain_interaction().

◆ nexternal_interaction_field_data()

unsigned oomph::ElementWithExternalElement::nexternal_interaction_field_data ( ) const

inline

Return the number of Data items that affect the external interactions in this element. This includes e.g. fluid velocities and pressures in adjacent fluid elements in an FSI problem

     {
       return Nexternal_interaction_field_data;
     }

References Nexternal_interaction_field_data.

Referenced by assign_external_interaction_data_local_eqn_numbers(), oomph::GeneralisedElement::assign_local_eqn_numbers(), describe_local_dofs(), oomph::FSIWallElement::describe_local_dofs(), external_interaction_field_data_pt(), and fill_in_jacobian_from_external_interaction_field_by_fd().

◆ nexternal_interaction_geometric_data()

unsigned oomph::ElementWithExternalElement::nexternal_interaction_geometric_data ( ) const

inline

Return the number of geometric Data items that affect the external interactions in this element: i.e. any geometric Data in the problem that affects the nodal positions in the external elements.

     {
       return Nexternal_interaction_geometric_data;
     }

References Nexternal_interaction_geometric_data.

Referenced by assign_external_interaction_data_local_eqn_numbers(), oomph::GeneralisedElement::assign_local_eqn_numbers(), describe_local_dofs(), oomph::FSIWallElement::describe_local_dofs(), external_interaction_geometric_data_pt(), and fill_in_jacobian_from_external_interaction_geometric_by_fd().

◆ ninteraction()

unsigned oomph::ElementWithExternalElement::ninteraction ( ) const

inline

Return the number of interactions in the element.

     {
       return Ninteraction;
     }

References Ninteraction.

Referenced by assign_external_interaction_data_local_eqn_numbers(), oomph::ProjectableElement< ELEMENT >::enable_projection(), identify_all_field_data_for_external_interaction(), oomph::FSIWallElement::identify_all_field_data_for_external_interaction(), identify_all_geometric_data_for_external_interaction(), and oomph::FSIWallElement::identify_all_geometric_data_for_external_interaction().

◆ operator=()

void oomph::ElementWithExternalElement::operator= ( const ElementWithExternalElement & )

delete

Broken assignment operator.

◆ output_external_elements()

void oomph::ElementWithExternalElement::output_external_elements	(	std::ostream &	outfile,
		const unsigned &	interaction_index
	)

Output by plotting vector from integration point to corresponding point in external element for specified interaction index

   {
     // Dimension of element
     unsigned n_dim_el = dim();
     Vector<double> s(n_dim_el);
  
     // Vectors for coordintes
     unsigned n_dim = node_pt(0)->ndim();
     Vector<double> x(n_dim);
     Vector<double> x_ext(n_dim);
  
     // Loop over the integration points
     const unsigned n_intpt = this->integral_pt()->nweight();
     outfile << "ZONE I=" << n_intpt << std::endl;
     for (unsigned ipt = 0; ipt < n_intpt; ipt++)
     {
       for (unsigned i = 0; i < n_dim_el; i++)
       {
         s[i] = integral_pt()->knot(ipt, i);
       }
  
       // Eulerian coordinates of integration point
       interpolated_x(s, x);
  
       // Get pointer to external element
       FiniteElement* ext_el_pt = external_element_pt(interaction_index, ipt);
       // Get local coordinate in external element
       Vector<double> s_ext(
         external_element_local_coord(interaction_index, ipt));
  
       // Eulerian coordinates of point in external element
       ext_el_pt->interpolated_x(s_ext, x_ext);
  
       // Output coords of interation point
       for (unsigned i = 0; i < n_dim; i++)
       {
         outfile << x[i] << " ";
       }
       // Write vector to point in external element
       for (unsigned i = 0; i < n_dim; i++)
       {
         outfile << x_ext[i] - x[i] << " ";
       }
       outfile << std::endl;
     }
   }

References oomph::FiniteElement::dim(), external_element_local_coord(), external_element_pt(), i, oomph::FiniteElement::integral_pt(), oomph::FiniteElement::interpolated_x(), oomph::Integral::knot(), oomph::Node::ndim(), oomph::FiniteElement::node_pt(), oomph::Integral::nweight(), s, and plotDoE::x.

◆ range_check()

void oomph::ElementWithExternalElement::range_check	(	const unsigned &	interaction_index,
		const unsigned &	ipt
	)		const

inlineprivate

Helper function for range checking in the access functions.

     {
       // Boolean flag used to indicate range error
       bool range_error = false;
       // String for the error message
       std::ostringstream error_message;
       // If there is a range error in the interaction index
       if (interaction_index >= Ninteraction)
       {
         error_message << "Range Error: Interaction " << interaction_index
                       << " is not in the range (0," << Ninteraction - 1 << ")";
         // There has been a range error
         range_error = true;
       }
  
       // If there is a range error in the integration point
       if (ipt >= Nintpt)
       {
         error_message << "Range Error: Integration point " << ipt
                       << " is not in the range (0," << Nintpt - 1 << ")";
         range_error = true;
       }
  
  
       // If there has been a range error report it
       if (range_error)
       {
         throw OomphLibError(error_message.str(),
                             OOMPH_CURRENT_FUNCTION,
                             OOMPH_EXCEPTION_LOCATION);
       }
     }

References Ninteraction, Nintpt, OOMPH_CURRENT_FUNCTION, and OOMPH_EXCEPTION_LOCATION.

Referenced by external_element_local_coord(), and external_element_pt().

◆ reset_after_external_interaction_field_fd()

virtual void oomph::ElementWithExternalElement::reset_after_external_interaction_field_fd ( )

inlineprotectedvirtual

Function that is call after the finite differencing of the external interaction data associated with external fields This may be overloaded to reset any dependent variables that may have changed during the finite differencing.

Reimplemented in oomph::FSIWallElement.

456 {}

Referenced by fill_in_jacobian_from_external_interaction_field_by_fd().

◆ reset_after_external_interaction_geometric_fd()

virtual void oomph::ElementWithExternalElement::reset_after_external_interaction_geometric_fd ( )

inlineprotectedvirtual

Function that is call after the finite differencing of the external interaction data associated with external geometry. This may be overloaded to reset any dependent variables that may have changed during the finite differencing.

Reimplemented in oomph::FSIWallElement, and oomph::FSIAxisymFoepplvonKarmanElement< NNODE_1D, FLUID_ELEMENT >.

487 {}

Referenced by fill_in_jacobian_from_external_interaction_geometric_by_fd().

◆ reset_in_external_interaction_field_fd()

virtual void oomph::ElementWithExternalElement::reset_in_external_interaction_field_fd ( const unsigned & i )

inlineprotectedvirtual

Function called within the finite difference loop for external interaction data after the values in the i-th external interaction data object associated with external fields are reset. The default behaviour is to call the update function.

Reimplemented in oomph::FSIWallElement.

     {
       update_in_external_interaction_field_fd(i);
     }

References i, and update_in_external_interaction_field_fd().

Referenced by fill_in_jacobian_from_external_interaction_field_by_fd().

◆ reset_in_external_interaction_geometric_fd()

virtual void oomph::ElementWithExternalElement::reset_in_external_interaction_geometric_fd ( const unsigned & i )

inlineprotectedvirtual

Function called within the finite difference loop for external interaction data after the values in the i-th external interaction data object associated with external geometry are reset. The default behaviour is to call the update function.

Reimplemented in oomph::FSIWallElement, and oomph::FSIAxisymFoepplvonKarmanElement< NNODE_1D, FLUID_ELEMENT >.

     {
       update_in_external_interaction_geometric_fd(i);
     }

References i, and update_in_external_interaction_geometric_fd().

Referenced by fill_in_jacobian_from_external_interaction_geometric_by_fd().

◆ set_ninteraction()

void oomph::ElementWithExternalElement::set_ninteraction ( const unsigned & n_interaction )

inline

Set the number of interactions in the element This function is usually called in the specific element's constructor

     {
       Ninteraction = n_interaction;
     }

References Ninteraction.

Referenced by oomph::AdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >::AdvectionDiffusionBoussinesqElement(), oomph::ProjectableElement< ELEMENT >::disable_projection(), oomph::FSIWallElement::enable_fluid_loading_on_both_sides(), oomph::ProjectableElement< ELEMENT >::enable_projection(), oomph::FourierDecomposedHelmholtzFluxFromNormalDisplacementBCElement< HELMHOLTZ_BULK_ELEMENT, ELASTICITY_BULK_ELEMENT >::FourierDecomposedHelmholtzFluxFromNormalDisplacementBCElement(), oomph::FourierDecomposedTimeHarmonicLinElastLoadedByHelmholtzPressureBCElement< ELASTICITY_BULK_ELEMENT, HELMHOLTZ_BULK_ELEMENT >::FourierDecomposedTimeHarmonicLinElastLoadedByHelmholtzPressureBCElement(), oomph::FSIAxisymFoepplvonKarmanElement< NNODE_1D, FLUID_ELEMENT >::FSIAxisymFoepplvonKarmanElement(), oomph::FSIAxisymmetricLinearElasticityTractionElement< ELASTICITY_BULK_ELEMENT, NAVIER_STOKES_BULK_ELEMENT >::FSIAxisymmetricLinearElasticityTractionElement(), oomph::FSIImposeDisplacementByLagrangeMultiplierElement< ELEMENT >::FSIImposeDisplacementByLagrangeMultiplierElement(), oomph::FSILinearisedAxisymPoroelasticTractionElement< POROELASTICITY_BULK_ELEMENT, NAVIER_STOKES_BULK_ELEMENT >::FSILinearisedAxisymPoroelasticTractionElement(), oomph::HeatedPenetratorFluxElement< ELEMENT >::HeatedPenetratorFluxElement(), oomph::HelmholtzFluxFromNormalDisplacementBCElement< HELMHOLTZ_BULK_ELEMENT, ELASTICITY_BULK_ELEMENT >::HelmholtzFluxFromNormalDisplacementBCElement(), oomph::LinearisedAxisymPoroelasticBJS_FSIElement< FLUID_BULK_ELEMENT, POROELASTICITY_BULK_ELEMENT >::LinearisedAxisymPoroelasticBJS_FSIElement(), oomph::LinearisedFSIAxisymmetricNStNoSlipBCElementElement< FLUID_BULK_ELEMENT, SOLID_BULK_ELEMENT >::LinearisedFSIAxisymmetricNStNoSlipBCElementElement(), oomph::NavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::NavierStokesBoussinesqElement(), oomph::PMLHelmholtzFluxFromNormalDisplacementBCElement< HELMHOLTZ_BULK_ELEMENT, ELASTICITY_BULK_ELEMENT >::PMLHelmholtzFluxFromNormalDisplacementBCElement(), oomph::RefineableAdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >::RefineableAdvectionDiffusionBoussinesqElement(), oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::RefineableNavierStokesBoussinesqElement(), oomph::FSIWallElement::setup_fsi_wall_element(), oomph::TimeHarmonicLinElastLoadedByHelmholtzPressureBCElement< ELASTICITY_BULK_ELEMENT, HELMHOLTZ_BULK_ELEMENT >::TimeHarmonicLinElastLoadedByHelmholtzPressureBCElement(), and oomph::TimeHarmonicLinElastLoadedByPMLHelmholtzPressureBCElement< ELASTICITY_BULK_ELEMENT, HELMHOLTZ_BULK_ELEMENT >::TimeHarmonicLinElastLoadedByPMLHelmholtzPressureBCElement().

◆ storage_has_been_allocated()

bool oomph::ElementWithExternalElement::storage_has_been_allocated ( ) const

inline

Helper function to check if storage has actually been allocated.

     {
       // If either of the storage arrays is zero, then storage has not
       // yet been allocated. Both arrays are allocated at once, so
       // if one is zero both will (should) be
       if ((External_element_pt == 0) || (External_element_local_coord == 0))
       {
         return false;
       }
       else
       {
         return true;
       }
     }

References External_element_local_coord, and External_element_pt.

◆ update_before_external_interaction_field_fd()

virtual void oomph::ElementWithExternalElement::update_before_external_interaction_field_fd ( )

inlineprotectedvirtual

Function that is called before the finite differencing of any external interaction data associated with external fields. This may be overloaded to update any dependent data before finite differencing takes place.

450 {}

Referenced by fill_in_jacobian_from_external_interaction_field_by_fd().

◆ update_before_external_interaction_geometric_fd()

virtual void oomph::ElementWithExternalElement::update_before_external_interaction_geometric_fd ( )

inlineprotectedvirtual

Function that is called before the finite differencing of any external interaction data associated with external geometry. This may be overloaded to update any dependent data before finite differencing takes place.

Reimplemented in oomph::FSIAxisymFoepplvonKarmanElement< NNODE_1D, FLUID_ELEMENT >.

481 {}

Referenced by fill_in_jacobian_from_external_interaction_geometric_by_fd().

◆ update_in_external_interaction_field_fd()

virtual void oomph::ElementWithExternalElement::update_in_external_interaction_field_fd ( const unsigned & i )

inlineprotectedvirtual

Function called within the finite difference loop for external interaction data after a change in any values in the i-th external interaction data object associated with external fields.

Reimplemented in oomph::FSIWallElement.

463 {

464 }

Referenced by fill_in_jacobian_from_external_interaction_field_by_fd(), and reset_in_external_interaction_field_fd().

◆ update_in_external_interaction_geometric_fd()

virtual void oomph::ElementWithExternalElement::update_in_external_interaction_geometric_fd ( const unsigned & i )

inlineprotectedvirtual

Function called within the finite difference loop for external interaction data after a change in any values in the i-th external interaction data object associated with external geometry.

Reimplemented in oomph::FSIWallElement, and oomph::FSIAxisymFoepplvonKarmanElement< NNODE_1D, FLUID_ELEMENT >.

494 {

495 }

Referenced by fill_in_jacobian_from_external_interaction_geometric_by_fd(), and reset_in_external_interaction_geometric_fd().

Member Data Documentation

◆ Add_external_geometric_data

bool oomph::ElementWithExternalElement::Add_external_geometric_data

protected

Boolean flag to indicate whether to include the external geometric data.

Referenced by add_external_geometric_data(), assign_external_interaction_data_local_eqn_numbers(), external_geometric_data_is_included(), ignore_external_geometric_data(), and include_external_geometric_data().

◆ Add_external_interaction_data

bool oomph::ElementWithExternalElement::Add_external_interaction_data

protected

Boolean flag to indicate whether to include the external data.

Referenced by add_external_interaction_data(), assign_external_interaction_data_local_eqn_numbers(), oomph::FSIWallElement::exclude_external_load_data(), ignore_external_interaction_data(), include_external_interaction_data(), and oomph::FSIWallElement::include_external_load_data().

◆ External_element_local_coord

Vector<double>* oomph::ElementWithExternalElement::External_element_local_coord

private

Storage for vectors of local coordinates in external elements that correspond to the appropriate integration / point.

Referenced by check_storage_allocated(), external_element_local_coord(), flush_all_external_element_storage(), initialise_external_element_storage(), and storage_has_been_allocated().

◆ External_element_pt

FiniteElement** oomph::ElementWithExternalElement::External_element_pt

private

Storage for pointers to elements that provide contributions to the residuals of the current element. Potentially a different element contributes to each integration point.

Referenced by check_storage_allocated(), external_element_pt(), flush_all_external_element_storage(), initialise_external_element_storage(), and storage_has_been_allocated().

◆ External_interaction_field_data_index

unsigned* oomph::ElementWithExternalElement::External_interaction_field_data_index

private

Storage for the index of the values in the external field data that affect the interactions in the element

Referenced by assign_external_interaction_data_local_eqn_numbers(), fill_in_jacobian_from_external_interaction_field_by_fd(), and ~ElementWithExternalElement().

◆ External_interaction_field_data_local_eqn

int* oomph::ElementWithExternalElement::External_interaction_field_data_local_eqn

private

Storage for the local equation number associated with the external field data the affect the interactions in the element

Referenced by assign_external_interaction_data_local_eqn_numbers(), fill_in_jacobian_from_external_interaction_field_by_fd(), and ~ElementWithExternalElement().

◆ External_interaction_field_data_pt

Data** oomph::ElementWithExternalElement::External_interaction_field_data_pt

protected

/ Storage for pointers to external field Data that affect the interactions in the elemenet

Referenced by assign_external_interaction_data_local_eqn_numbers(), describe_local_dofs(), oomph::FSIWallElement::describe_local_dofs(), external_interaction_field_data_pt(), fill_in_jacobian_from_external_interaction_field_by_fd(), and ~ElementWithExternalElement().

◆ External_interaction_geometric_data_index

unsigned* oomph::ElementWithExternalElement::External_interaction_geometric_data_index

private

Storage for the index of the values in the external geometric data that affect the interactions in the element

Referenced by assign_external_interaction_data_local_eqn_numbers(), fill_in_jacobian_from_external_interaction_geometric_by_fd(), and ~ElementWithExternalElement().

◆ External_interaction_geometric_data_local_eqn

int* oomph::ElementWithExternalElement::External_interaction_geometric_data_local_eqn

private

Storage for the local equation number associated with the external geometric data the affect the interactions in the element

Referenced by assign_external_interaction_data_local_eqn_numbers(), fill_in_jacobian_from_external_interaction_geometric_by_fd(), and ~ElementWithExternalElement().

◆ External_interaction_geometric_data_pt

Data** oomph::ElementWithExternalElement::External_interaction_geometric_data_pt

protected

/ Storage for pointers to external geometric Data that affect the interactions in the elemenet

Referenced by assign_external_interaction_data_local_eqn_numbers(), describe_local_dofs(), oomph::FSIWallElement::describe_local_dofs(), external_interaction_geometric_data_pt(), fill_in_jacobian_from_external_interaction_geometric_by_fd(), and ~ElementWithExternalElement().

◆ Nexternal_element_storage

unsigned oomph::ElementWithExternalElement::Nexternal_element_storage

private

Number of entries in the external element storage schemes (Nintergation_pt * Ninteraction)

Referenced by flush_all_external_element_storage(), and initialise_external_element_storage().

◆ Nexternal_interaction_field_data

unsigned oomph::ElementWithExternalElement::Nexternal_interaction_field_data

private

Number of external interaction field data.

Referenced by assign_external_interaction_data_local_eqn_numbers(), and nexternal_interaction_field_data().

◆ Nexternal_interaction_geometric_data

unsigned oomph::ElementWithExternalElement::Nexternal_interaction_geometric_data

private

Number of external interaction geometric data.

Referenced by assign_external_interaction_data_local_eqn_numbers(), and nexternal_interaction_geometric_data().

◆ Ninteraction

unsigned oomph::ElementWithExternalElement::Ninteraction

private

Number of interactions.

Referenced by initialise_external_element_storage(), ninteraction(), range_check(), and set_ninteraction().

◆ Nintpt

unsigned oomph::ElementWithExternalElement::Nintpt

private

Number of intergation point in the element.

Referenced by external_element_local_coord(), external_element_pt(), initialise_external_element_storage(), and range_check().

The documentation for this class was generated from the following files:

Public Member Functions

Protected Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ ElementWithExternalElement() [1/2]

◆ ~ElementWithExternalElement()

◆ ElementWithExternalElement() [2/2]

Member Function Documentation

◆ add_external_geometric_data()

◆ add_external_interaction_data()

◆ assign_external_interaction_data_local_eqn_numbers()

◆ assign_internal_and_external_local_eqn_numbers()

◆ check_storage_allocated()

◆ describe_local_dofs()

◆ external_element_local_coord() [1/2]

◆ external_element_local_coord() [2/2]

◆ external_element_pt() [1/2]

◆ external_element_pt() [2/2]

◆ external_geometric_data_is_included()

◆ external_interaction_field_data_pt()

◆ external_interaction_geometric_data_pt()

◆ fill_in_contribution_to_jacobian()

◆ fill_in_jacobian_from_external_interaction_by_fd() [1/2]

◆ fill_in_jacobian_from_external_interaction_by_fd() [2/2]

◆ fill_in_jacobian_from_external_interaction_field_by_fd() [1/2]

◆ fill_in_jacobian_from_external_interaction_field_by_fd() [2/2]

◆ fill_in_jacobian_from_external_interaction_geometric_by_fd() [1/2]

◆ fill_in_jacobian_from_external_interaction_geometric_by_fd() [2/2]

◆ flush_all_external_element_storage()

◆ identify_all_field_data_for_external_interaction()

◆ identify_all_geometric_data_for_external_interaction()

◆ ignore_external_geometric_data()

◆ ignore_external_interaction_data()

◆ include_external_geometric_data()

◆ include_external_interaction_data()

◆ initialise_external_element_storage()

◆ nexternal_interaction_field_data()

◆ nexternal_interaction_geometric_data()

◆ ninteraction()

◆ operator=()

◆ output_external_elements()

◆ range_check()

◆ reset_after_external_interaction_field_fd()

◆ reset_after_external_interaction_geometric_fd()

◆ reset_in_external_interaction_field_fd()

◆ reset_in_external_interaction_geometric_fd()

◆ set_ninteraction()

◆ storage_has_been_allocated()

◆ update_before_external_interaction_field_fd()

◆ update_before_external_interaction_geometric_fd()

◆ update_in_external_interaction_field_fd()

◆ update_in_external_interaction_geometric_fd()

Member Data Documentation

◆ Add_external_geometric_data

◆ Add_external_interaction_data

◆ External_element_local_coord

◆ External_element_pt

◆ External_interaction_field_data_index

◆ External_interaction_field_data_local_eqn

◆ External_interaction_field_data_pt

◆ External_interaction_geometric_data_index

◆ External_interaction_geometric_data_local_eqn

◆ External_interaction_geometric_data_pt

◆ Nexternal_element_storage

◆ Nexternal_interaction_field_data

◆ Nexternal_interaction_geometric_data

◆ Ninteraction

◆ Nintpt