oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT > Class Template Reference
+ Inheritance diagram for oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >:

Public Member Functions

 FixedVolumeSpineLineMarangoniFluidInterfaceElement (FiniteElement *const &element_pt, const int &face_index)
 
double bi ()
 
double ma ()
 
double *& ma_pt ()
 
double *& bi_pt ()
 
void set_traded_pressure_data (Data *traded_pressure_data_pt)
 
FluidInterfaceBoundingElementmake_bounding_element (const int &face_index)
 
- Public Member Functions inherited from oomph::SpineLineFluidInterfaceElement< ELEMENT >
 SpineLineFluidInterfaceElement (FiniteElement *const &element_pt, const int &face_index)
 
- Public Member Functions inherited from oomph::SpineUpdateFluidInterfaceElement< FluidInterfaceElement, LineDerivatives, ELEMENT >
 SpineUpdateFluidInterfaceElement (FiniteElement *const &element_pt, const int &face_index, const unsigned &id=0)
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 Calculate the contribution to the residuals and the jacobian. More...
 
void add_additional_residual_contributions_interface (Vector< double > &residuals, DenseMatrix< double > &jacobian, const unsigned &flag, const Shape &psif, const DShape &dpsifds, const DShape &dpsifdS, const DShape &dpsifdS_div, const Vector< double > &s, const Vector< double > &interpolated_x, const Vector< double > &interpolated_n, const double &W, const double &J)
 Helper function to calculate the additional contributions These are those filled in by the particular equations. More...
 
void output (std::ostream &outfile)
 Overload the output function. More...
 
void output (std::ostream &outfile, const unsigned &n_plot)
 Output the element. More...
 
void output (FILE *file_pt)
 Overload the C-style output function. More...
 
void output (FILE *file_pt, const unsigned &n_plot)
 C-style Output function. More...
 
- Public Member Functions inherited from oomph::Hijacked< SpineElement< FaceGeometry< ELEMENT > > >
 Hijacked ()
 Constructor, call the constructors of the base elements. More...
 
 Hijacked (FiniteElement *const &element_pt, const int &face_index)
 Constructor used for hijacking face elements. More...
 
 Hijacked (FiniteElement *const &element_pt, const int &face_index, const unsigned &id=0)
 
Datahijack_internal_value (const unsigned &n, const unsigned &i, const bool &return_data=true)
 
Datahijack_external_value (const unsigned &n, const unsigned &i, const bool &return_data=true)
 
Datahijack_nodal_value (const unsigned &n, const unsigned &i, const bool &return_data=true)
 
Datahijack_nodal_position_value (const unsigned &n, const unsigned &i, const bool &return_data=true)
 
Datahijack_nodal_spine_value (const unsigned &n, const unsigned &i, const bool &return_data=true)
 
void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 
void get_residuals (Vector< double > &residuals)
 
void get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
- Public Member Functions inherited from oomph::SpineElement< FaceGeometry< ELEMENT > >
 SpineElement ()
 Constructor, call the constructor of the base element. More...
 
 SpineElement (FiniteElement *const &element_pt, const int &face_index)
 Constructor used for spine face elements. More...
 
 ~SpineElement ()
 Destructor, clean up the storage allocated to the local equation numbers. More...
 
int spine_local_eqn (const unsigned &n)
 
- Public Member Functions inherited from oomph::ElementWithSpecificMovingNodes< ELEMENT, NODE_TYPE >
void describe_local_dofs (std::ostream &out, const std::string &current_string) const
 
 ElementWithSpecificMovingNodes ()
 Constructor, call the constructor of the base element. More...
 
 ElementWithSpecificMovingNodes (FiniteElement *const &element_pt, const int &face_index)
 Constructor used for face elements. More...
 
 ~ElementWithSpecificMovingNodes ()
 Empty Destructor,. More...
 
void describe_local_dofs (std::ostream &out, std::string &curr_str)
 Unique final overrider for describe_dofs. More...
 
Nodeconstruct_node (const unsigned &n)
 
Nodeconstruct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 Overloaded node allocation for unsteady problems. More...
 
Nodeconstruct_boundary_node (const unsigned &n)
 Overload the node assignment routine to assign boundary nodes. More...
 
Nodeconstruct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 Overloaded boundary node allocation for unsteady problems. More...
 
void assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)
 
void get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 Compute the element's residuals vector and jacobian matrix. More...
 
- Public Member Functions inherited from oomph::ElementWithMovingNodes
 ElementWithMovingNodes ()
 Constructor. More...
 
 ElementWithMovingNodes (const ElementWithMovingNodes &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithMovingNodes &)=delete
 Broken assignment operator. More...
 
virtual ~ElementWithMovingNodes ()
 Virtual destructor (clean up and allocated memory) More...
 
unsigned ngeom_dof () const
 Number of geometric dofs. More...
 
int geometric_data_local_eqn (const unsigned &n, const unsigned &i)
 
void assemble_set_of_all_geometric_data (std::set< Data * > &unique_geom_data_pt)
 Return a set of all geometric data associated with the element. More...
 
void identify_geometric_data (std::set< Data * > &geometric_data_pt)
 
bool are_dresidual_dnodal_coordinates_always_evaluated_by_fd () const
 Return whether shape derivatives are evaluated by fd. More...
 
void enable_always_evaluate_dresidual_dnodal_coordinates_by_fd ()
 
void disable_always_evaluate_dresidual_dnodal_coordinates_by_fd ()
 
void evaluate_shape_derivs_by_direct_fd ()
 Evaluate shape derivatives by direct finite differencing. More...
 
void evaluate_shape_derivs_by_chain_rule (const bool &i_know_what_i_am_doing=false)
 
void evaluate_shape_derivs_by_fastest_method (const bool &i_know_what_i_am_doing=false)
 
intmethod_for_shape_derivs ()
 Access to method (enumerated flag) for determination of shape derivs. More...
 
void enable_bypass_fill_in_jacobian_from_geometric_data ()
 Bypass the call to fill_in_jacobian_from_geometric_data. More...
 
void disable_bypass_fill_in_jacobian_from_geometric_data ()
 Do not bypass the call to fill_in_jacobian_from_geometric_data. More...
 
bool is_fill_in_jacobian_from_geometric_data_bypassed () const
 
unsigned ngeom_data () const
 
- Public Member Functions inherited from oomph::FiniteElement
void set_dimension (const unsigned &dim)
 
void set_nodal_dimension (const unsigned &nodal_dim)
 
void set_nnodal_position_type (const unsigned &nposition_type)
 Set the number of types required to interpolate the coordinate. More...
 
void set_n_node (const unsigned &n)
 
int nodal_local_eqn (const unsigned &n, const unsigned &i) const
 
double dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const
 
 FiniteElement ()
 Constructor. More...
 
virtual ~FiniteElement ()
 
 FiniteElement (const FiniteElement &)=delete
 Broken copy constructor. More...
 
virtual bool local_coord_is_valid (const Vector< double > &s)
 Broken assignment operator. More...
 
virtual void move_local_coord_back_into_element (Vector< double > &s) const
 
void get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const
 
virtual void local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
 
virtual void local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
 
virtual double local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt)
 
MacroElementmacro_elem_pt ()
 Access function to pointer to macro element. More...
 
void get_x (const Vector< double > &s, Vector< double > &x) const
 
void get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const
 
virtual void get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void set_integration_scheme (Integral *const &integral_pt)
 Set the spatial integration scheme. More...
 
Integral *const & integral_pt () const
 Return the pointer to the integration scheme (const version) More...
 
virtual void shape (const Vector< double > &s, Shape &psi) const =0
 
virtual void shape_at_knot (const unsigned &ipt, Shape &psi) const
 
virtual void dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
 
virtual void dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const
 
virtual void d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual void d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
void check_jacobian (const double &jacobian) const
 
double dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const
 
double d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual double d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual void assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const
 
Node *& node_pt (const unsigned &n)
 Return a pointer to the local node n. More...
 
Node *const & node_pt (const unsigned &n) const
 Return a pointer to the local node n (const version) More...
 
unsigned nnode () const
 Return the number of nodes. More...
 
virtual unsigned nnode_1d () const
 
double raw_nodal_position (const unsigned &n, const unsigned &i) const
 
double raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position (const unsigned &n, const unsigned &i) const
 
double nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double dnodal_position_dt (const unsigned &n, const unsigned &i) const
 Return the i-th component of nodal velocity: dx/dt at local node n. More...
 
double dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
virtual void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
virtual void disable_ALE ()
 
virtual void enable_ALE ()
 
virtual unsigned required_nvalue (const unsigned &n) const
 
unsigned nnodal_position_type () const
 
bool has_hanging_nodes () const
 
unsigned nodal_dimension () const
 Return the required Eulerian dimension of the nodes in this element. More...
 
virtual unsigned nvertex_node () const
 
virtual Nodevertex_node_pt (const unsigned &j) const
 
int get_node_number (Node *const &node_pt) const
 
virtual Nodeget_node_at_local_coordinate (const Vector< double > &s) const
 
double raw_nodal_value (const unsigned &n, const unsigned &i) const
 
double raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
unsigned dim () const
 
virtual ElementGeometry::ElementGeometry element_geometry () const
 Return the geometry type of the element (either Q or T usually). More...
 
unsigned ngeom_data () const
 
Datageom_data_pt (const unsigned &j)
 
void position (const Vector< double > &zeta, Vector< double > &r) const
 
void position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const
 
void dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)
 
void interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const
 
void locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)
 
virtual void node_update ()
 
virtual void identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)
 
virtual double s_min () const
 Min value of local coordinate. More...
 
virtual double s_max () const
 Max. value of local coordinate. More...
 
double size () const
 
virtual double compute_physical_size () const
 
virtual void point_output_data (const Vector< double > &s, Vector< double > &data)
 
void point_output (std::ostream &outfile, const Vector< double > &s)
 
virtual unsigned nplot_points_paraview (const unsigned &nplot) const
 
virtual unsigned nsub_elements_paraview (const unsigned &nplot) const
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const
 
virtual void write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const
 
virtual unsigned nscalar_paraview () const
 
virtual void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
virtual std::string scalar_name_paraview (const unsigned &i) const
 
virtual void output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 Output an exact solution over the element. More...
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 Output a time-dependent exact solution over the element. More...
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
 Output a time-dependent exact solution over the element. More...
 
virtual void get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
 
virtual std::string tecplot_zone_string (const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const
 
virtual unsigned nplot_points (const unsigned &nplot) const
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)
 
void integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
 Integrate Vector-valued function over element. More...
 
void integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
 Integrate Vector-valued time-dep function over element. More...
 
virtual void build_face_element (const int &face_index, FaceElement *face_element_pt)
 
virtual unsigned self_test ()
 
virtual unsigned get_bulk_node_number (const int &face_index, const unsigned &i) const
 
virtual int face_outer_unit_normal_sign (const int &face_index) const
 Get the sign of the outer unit normal on the face given by face_index. More...
 
virtual unsigned nnode_on_face () const
 
void face_node_number_error_check (const unsigned &i) const
 Range check for face node numbers. More...
 
virtual CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt (const int &face_index) const
 
virtual BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt (const int &face_index) const
 
- Public Member Functions inherited from oomph::GeneralisedElement
 GeneralisedElement ()
 Constructor: Initialise all pointers and all values to zero. More...
 
virtual ~GeneralisedElement ()
 Virtual destructor to clean up any memory allocated by the object. More...
 
 GeneralisedElement (const GeneralisedElement &)=delete
 Broken copy constructor. More...
 
void operator= (const GeneralisedElement &)=delete
 Broken assignment operator. More...
 
Data *& internal_data_pt (const unsigned &i)
 Return a pointer to i-th internal data object. More...
 
Data *const & internal_data_pt (const unsigned &i) const
 Return a pointer to i-th internal data object (const version) More...
 
Data *& external_data_pt (const unsigned &i)
 Return a pointer to i-th external data object. More...
 
Data *const & external_data_pt (const unsigned &i) const
 Return a pointer to i-th external data object (const version) More...
 
unsigned long eqn_number (const unsigned &ieqn_local) const
 
int local_eqn_number (const unsigned long &ieqn_global) const
 
unsigned add_external_data (Data *const &data_pt, const bool &fd=true)
 
bool external_data_fd (const unsigned &i) const
 
void exclude_external_data_fd (const unsigned &i)
 
void include_external_data_fd (const unsigned &i)
 
void flush_external_data ()
 Flush all external data. More...
 
void flush_external_data (Data *const &data_pt)
 Flush the object addressed by data_pt from the external data array. More...
 
unsigned ninternal_data () const
 Return the number of internal data objects. More...
 
unsigned nexternal_data () const
 Return the number of external data objects. More...
 
unsigned ndof () const
 Return the number of equations/dofs in the element. More...
 
void dof_vector (const unsigned &t, Vector< double > &dof)
 Return the vector of dof values at time level t. More...
 
void dof_pt_vector (Vector< double * > &dof_pt)
 Return the vector of pointers to dof values. More...
 
void set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)
 
virtual void get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
virtual void compute_norm (Vector< double > &norm)
 
virtual void compute_norm (double &norm)
 
virtual unsigned ndof_types () const
 
virtual void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const
 
- Public Member Functions inherited from oomph::GeomObject
 GeomObject ()
 Default constructor. More...
 
 GeomObject (const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)
 
 GeomObject (const GeomObject &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const GeomObject &)=delete
 Broken assignment operator. More...
 
virtual ~GeomObject ()
 (Empty) destructor More...
 
unsigned nlagrangian () const
 Access function to # of Lagrangian coordinates. More...
 
unsigned ndim () const
 Access function to # of Eulerian coordinates. More...
 
void set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
 Set # of Lagrangian and Eulerian coordinates. More...
 
TimeStepper *& time_stepper_pt ()
 
TimeSteppertime_stepper_pt () const
 
virtual void position (const double &t, const Vector< double > &zeta, Vector< double > &r) const
 
virtual void dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const
 
virtual void d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const
 
virtual void d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const
 
- Public Member Functions inherited from oomph::SpineFiniteElement
 SpineFiniteElement ()
 Empty constructor. More...
 
virtual ~SpineFiniteElement ()
 Emtpty virtual destructor. More...
 
- Public Member Functions inherited from oomph::HijackedElementBase
 HijackedElementBase ()
 
virtual ~HijackedElementBase ()
 Destructor, destroy the storage for the equation numbers. More...
 
void unhijack_all_data ()
 
const doubleresidual_multiplier () const
 Return the value of the residual multiplier. More...
 
double *& residual_multiplier_pt ()
 Return the pointer to the residual multiplier. More...
 
- Public Member Functions inherited from oomph::FluidInterfaceElement
 FluidInterfaceElement ()
 Constructor, set the default values of the booleans and pointers (null) More...
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Calculate the residuals by calling the generic residual contribution. More...
 
const doubleca () const
 The value of the Capillary number. More...
 
double *& ca_pt ()
 Pointer to the Capillary number. More...
 
const doublest () const
 The value of the Strouhal number. More...
 
double *& st_pt ()
 The pointer to the Strouhal number. More...
 
double u (const unsigned &j, const unsigned &i)
 Return the i-th velocity component at local node j. More...
 
double interpolated_u (const Vector< double > &s, const unsigned &i)
 Calculate the i-th velocity component at the local coordinate s. More...
 
double pext () const
 Return the value of the external pressure. More...
 
void set_external_pressure_data (Data *external_pressure_data_pt)
 
void set_external_pressure_data (Data *external_pressure_data_pt, const unsigned &index_of_external_pressure_value)
 
- Public Member Functions inherited from oomph::FaceElement
 FaceElement ()
 Constructor: Initialise all appropriate member data. More...
 
virtual ~FaceElement ()
 Empty virtual destructor. More...
 
 FaceElement (const FaceElement &)=delete
 Broken copy constructor. More...
 
const unsignedboundary_number_in_bulk_mesh () const
 Broken assignment operator. More...
 
void set_boundary_number_in_bulk_mesh (const unsigned &b)
 Set function for the boundary number in bulk mesh. More...
 
double zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double J_eulerian (const Vector< double > &s) const
 
double J_eulerian_at_knot (const unsigned &ipt) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
double interpolated_x (const Vector< double > &s, const unsigned &i) const
 
double interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
void interpolated_x (const Vector< double > &s, Vector< double > &x) const
 
void interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const
 
double interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)
 
void interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)
 
intnormal_sign ()
 
int normal_sign () const
 
intface_index ()
 
int face_index () const
 
const Vector< double > * tangent_direction_pt () const
 Public access function for the tangent direction pointer. More...
 
void set_tangent_direction (Vector< double > *tangent_direction_pt)
 Set the tangent direction vector. More...
 
void turn_on_warning_for_discontinuous_tangent ()
 
void turn_off_warning_for_discontinuous_tangent ()
 
void continuous_tangent_and_outer_unit_normal (const Vector< double > &s, Vector< Vector< double >> &tang_vec, Vector< double > &unit_normal) const
 
void continuous_tangent_and_outer_unit_normal (const unsigned &ipt, Vector< Vector< double >> &tang_vec, Vector< double > &unit_normal) const
 
void outer_unit_normal (const Vector< double > &s, Vector< double > &unit_normal) const
 Compute outer unit normal at the specified local coordinate. More...
 
void outer_unit_normal (const unsigned &ipt, Vector< double > &unit_normal) const
 Compute outer unit normal at ipt-th integration point. More...
 
FiniteElement *& bulk_element_pt ()
 Pointer to higher-dimensional "bulk" element. More...
 
FiniteElementbulk_element_pt () const
 Pointer to higher-dimensional "bulk" element (const version) More...
 
CoordinateMappingFctPtface_to_bulk_coordinate_fct_pt ()
 
CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt () const
 
BulkCoordinateDerivativesFctPtbulk_coordinate_derivatives_fct_pt ()
 
BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt () const
 
Vector< doublelocal_coordinate_in_bulk (const Vector< double > &s) const
 
void get_local_coordinate_in_bulk (const Vector< double > &s, Vector< double > &s_bulk) const
 
void get_ds_bulk_ds_face (const Vector< double > &s, DenseMatrix< double > &dsbulk_dsface, unsigned &interior_direction) const
 
unsignedbulk_position_type (const unsigned &i)
 
const unsignedbulk_position_type (const unsigned &i) const
 
void bulk_node_number_resize (const unsigned &i)
 Resize the storage for the bulk node numbers. More...
 
unsignedbulk_node_number (const unsigned &n)
 
const unsignedbulk_node_number (const unsigned &n) const
 
void bulk_position_type_resize (const unsigned &i)
 Resize the storage for bulk_position_type to i entries. More...
 
unsignednbulk_value (const unsigned &n)
 
unsigned nbulk_value (const unsigned &n) const
 
void nbulk_value_resize (const unsigned &i)
 
void resize_nodes (Vector< unsigned > &nadditional_data_values)
 
void output_zeta (std::ostream &outfile, const unsigned &nplot)
 Output boundary coordinate zeta. More...
 
- Public Member Functions inherited from oomph::LineDerivatives
 LineDerivatives ()
 

Protected Member Functions

double sigma (const Vector< double > &s)
 Overload the surface tension function. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 Calculate the contribution to the jacobian. More...
 
void add_additional_residual_contributions_interface (Vector< double > &residuals, DenseMatrix< double > &jacobian, const unsigned &flag, const Shape &psif, const DShape &dpsifds, const DShape &dpsifdS, const DShape &dpsifdS_div, const Vector< double > &s, const Vector< double > &interpolated_x, const Vector< double > &interpolated_n, const double &W, const double &J)
 
- Protected Member Functions inherited from oomph::SpineUpdateFluidInterfaceElement< FluidInterfaceElement, LineDerivatives, ELEMENT >
double compute_surface_derivatives (const Shape &psi, const DShape &dpsids, const DenseMatrix< double > &interpolated_t, const Vector< double > &interpolated_x, DShape &surface_gradient, DShape &surface_divergence)
 
- Protected Member Functions inherited from oomph::ElementWithMovingNodes
virtual void get_dnodal_coordinates_dgeom_dofs (RankThreeTensor< double > &dnodal_coordinates_dgeom_dofs)
 
void fill_in_jacobian_from_geometric_data (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_geometric_data (DenseMatrix< double > &jacobian)
 
- Protected Member Functions inherited from oomph::FiniteElement
virtual void assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const
 
virtual void assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const
 
virtual void assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const
 
template<unsigned DIM>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual void dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<unsigned DIM>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
virtual void d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<unsigned DIM>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
virtual void transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
void transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
virtual void transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
virtual void fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_nodal_fd ()
 
virtual void reset_after_nodal_fd ()
 
virtual void update_in_nodal_fd (const unsigned &i)
 
virtual void reset_in_nodal_fd (const unsigned &i)
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 One-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Two-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
- Protected Member Functions inherited from oomph::GeneralisedElement
unsigned add_internal_data (Data *const &data_pt, const bool &fd=true)
 
bool internal_data_fd (const unsigned &i) const
 
void exclude_internal_data_fd (const unsigned &i)
 
void include_internal_data_fd (const unsigned &i)
 
void clear_global_eqn_numbers ()
 
void add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)
 
virtual void assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void assign_additional_local_eqn_numbers ()
 
int internal_local_eqn (const unsigned &i, const unsigned &j) const
 
int external_local_eqn (const unsigned &i, const unsigned &j)
 
void fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
virtual void update_before_internal_fd ()
 
virtual void reset_after_internal_fd ()
 
virtual void update_in_internal_fd (const unsigned &i)
 
virtual void reset_in_internal_fd (const unsigned &i)
 
virtual void update_before_external_fd ()
 
virtual void reset_after_external_fd ()
 
virtual void update_in_external_fd (const unsigned &i)
 
virtual void reset_in_external_fd (const unsigned &i)
 
virtual void fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Protected Member Functions inherited from oomph::HijackedElementBase
void hijack_global_eqn (long *const &global_eqn_pt)
 
void unhijack_global_eqn (long *const &global_eqn_pt)
 
- Protected Member Functions inherited from oomph::FluidInterfaceElement
int pext_local_eqn ()
 
virtual void fill_in_generic_residual_contribution_interface (Vector< double > &residuals, DenseMatrix< double > &jacobian, unsigned flag)
 
- Protected Member Functions inherited from oomph::FaceElement
void add_additional_values (const Vector< unsigned > &nadditional_values, const unsigned &id)
 
- Protected Member Functions inherited from oomph::LineDerivatives
double compute_surface_derivatives (const Shape &psi, const DShape &dpsids, const DenseMatrix< double > &interpolated_t, const Vector< double > &interpolated_x, DShape &surface_gradient, DShape &surface_divergence)
 Fill in the specific surface derivative calculations. More...
 

Private Member Functions

int ptraded_local_eqn ()
 

Private Attributes

int Ptraded_local_eqn
 value that has been traded for the volume constraint. More...
 
unsigned External_data_number_of_traded_pressure
 
DataPtraded_data_pt
 
doubleBi_pt
 Pointer to a Biot number. More...
 
doubleMa_pt
 Pointer to a Marangoni number. More...
 
unsigned T_index
 Index at which the temperature is stored at the nodes. More...
 

Static Private Attributes

static double Default_Physical_Constant_Value = 1.0
 Default value of the physical constants. More...
 

Additional Inherited Members

- Public Types inherited from oomph::ElementWithMovingNodes
enum  { Shape_derivs_by_chain_rule , Shape_derivs_by_direct_fd , Shape_derivs_by_fastest_method }
 Public enumeration to choose method for computing shape derivatives. More...
 
- Public Types inherited from oomph::FiniteElement
typedef void(* SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)
 
typedef void(* UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)
 
- Static Public Attributes inherited from oomph::FiniteElement
static double Tolerance_for_singular_jacobian = 1.0e-16
 Tolerance below which the jacobian is considered singular. More...
 
static bool Accept_negative_jacobian = false
 
static bool Suppress_output_while_checking_for_inverted_elements
 
- Static Public Attributes inherited from oomph::GeneralisedElement
static bool Suppress_warning_about_repeated_internal_data
 
static bool Suppress_warning_about_repeated_external_data = true
 
static double Default_fd_jacobian_step = 1.0e-8
 
- Protected Attributes inherited from oomph::ElementWithMovingNodes
Vector< Data * > Geom_data_pt
 
- Protected Attributes inherited from oomph::FiniteElement
MacroElementMacro_elem_pt
 Pointer to the element's macro element (NULL by default) More...
 
- Protected Attributes inherited from oomph::GeomObject
unsigned NLagrangian
 Number of Lagrangian (intrinsic) coordinates. More...
 
unsigned Ndim
 Number of Eulerian coordinates. More...
 
TimeStepperGeom_object_time_stepper_pt
 
- Protected Attributes inherited from oomph::HijackedElementBase
std::set< long * > * Hijacked_global_eqn_number_pt
 
Vector< int > * Hijacked_local_eqn_number_pt
 
doubleResidual_multiplier_pt
 
- Protected Attributes inherited from oomph::FluidInterfaceElement
Vector< unsignedU_index_interface
 Nodal index at which the i-th velocity component is stored. More...
 
int External_data_number_of_external_pressure
 
DataPext_data_pt
 Pointer to the Data item that stores the external pressure. More...
 
unsigned Index_of_external_pressure_value
 Which of the values in Pext_data_pt stores the external pressure. More...
 
- Protected Attributes inherited from oomph::FaceElement
unsigned Boundary_number_in_bulk_mesh
 The boundary number in the bulk mesh to which this element is attached. More...
 
FiniteElementBulk_element_pt
 Pointer to the associated higher-dimensional "bulk" element. More...
 
Vector< unsignedBulk_node_number
 
Vector< unsignedNbulk_value
 
Vector< double > * Tangent_direction_pt
 
- Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned Default_Initial_Nvalue = 0
 Default value for the number of values at a node. More...
 
static const double Node_location_tolerance = 1.0e-14
 
static const unsigned N2deriv [] = {0, 1, 3, 6}
 
- Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< doubleDummy_matrix
 
static std::deque< double * > Dof_pt_deque
 
- Static Protected Attributes inherited from oomph::HijackedElementBase
static double Default_residual_multiplier = 0.0
 

Detailed Description

template<class ELEMENT>
class oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >

New Marangoni surface tension elements that also include a fixed volume constraint for steady problems. Note that the implementation is rather specific for our meshes used in this demo driver. You may have to alter this class for different problems.

Constructor & Destructor Documentation

◆ FixedVolumeSpineLineMarangoniFluidInterfaceElement()

template<class ELEMENT >
oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::FixedVolumeSpineLineMarangoniFluidInterfaceElement ( FiniteElement *const &  element_pt,
const int face_index 
)
inline

Constructor that passes the bulk element and the face index down to the underlying

414  :
416  (element_pt,face_index)
417  {
418  //Initialise the values
421 
422  Ptraded_data_pt = 0;
423 
424  //Cast the bulk element
425  ELEMENT* cast_element_pt = dynamic_cast<ELEMENT*>(element_pt);
426  //Now find the index at which the temperature is stored from the
427  //advection-diffusion part of the bulk element
428  T_index = cast_element_pt->u_index_adv_diff();
429  }
int & face_index()
Definition: elements.h:4626
unsigned T_index
Index at which the temperature is stored at the nodes.
Definition: marangoni_convection_box.cc:225
double * Bi_pt
Pointer to a Biot number.
Definition: marangoni_convection_box.cc:219
Data * Ptraded_data_pt
Definition: marangoni_convection_box.cc:206
double * Ma_pt
Pointer to a Marangoni number.
Definition: marangoni_convection_box.cc:222
static double Default_Physical_Constant_Value
Default value of the physical constants.
Definition: marangoni_convection_box.cc:228
Definition: specific_node_update_interface_elements.h:556

References oomph::MultiDomainBoussinesqHelper::Default_Physical_Constant_Value.

Member Function Documentation

◆ add_additional_residual_contributions_interface()

template<class ELEMENT >
void oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::add_additional_residual_contributions_interface ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian,
const unsigned flag,
const Shape psif,
const DShape dpsifds,
const DShape dpsifdS,
const DShape dpsifdS_div,
const Vector< double > &  s,
const Vector< double > &  interpolated_x,
const Vector< double > &  interpolated_n,
const double W,
const double J 
)
inlineprotectedvirtual

Overload the Helper function to calculate the residuals and jacobian entries. This particular function ensures that the additional entries are calculated inside the integration loop

Reimplemented from oomph::FluidInterfaceElement.

335  {
336  //Find the index at which the temperature is stored
337  unsigned t_index = this->T_index;
338 
339  //Find out how many nodes there are
340  unsigned n_node = this->nnode();
341 
342  //Read out the Bi number
343  const double Bi = this->bi();
344 
345  //Now calculate the temperature at this point
346  //Assuming the same shape functions are used (which they are)
347  double T = 0.0;
348  for(unsigned l=0;l<n_node;l++)
349  {
350  T += this->nodal_value(l,t_index)*psif(l);
351  }
352 
353  //Storage for the local equation numbers and unknowns
354  int local_eqn = 0, local_unknown = 0;
355 
356  //Now we add the flux term to the appropriate residuals
357  for(unsigned l=0;l<n_node;l++)
358  {
359  //Read out the apprporiate local equation
360  local_eqn = this->nodal_local_eqn(l,t_index);
361 
362  //If not a boundary condition
363  if(local_eqn >= 0)
364  {
365  residuals[local_eqn] -= Bi*T*psif(l)*W*J;
366 
367  //We also need to worry about the jacobian terms
368  if(flag)
369  {
370  //Loop over the nodes again
371  for(unsigned l2=0;l2<n_node;l2++)
372  {
373  //Get the unknown
374  local_unknown = this->nodal_local_eqn(l2,t_index);
375  //If not a boundary condition
376  if(local_unknown >= 0)
377  {
378  jacobian(local_eqn,local_unknown) -= Bi*psif(l2)*psif(l)*W*J;
379  }
380  }
381  }
382  }
383  } //End of loop over nodes
384 
385  //Now do the volume constraint
386  local_eqn = ptraded_local_eqn();
387  if(local_eqn >=0)
388  {
389  //Find the x position
391  //Fill in the x position
392  for(unsigned l=0;l<n_node;l++)
393  {
394  const double psi_local = psif(l);
395  for(unsigned i=0;i<2;i++)
396  {
397  interpolated_x[i] += this->nodal_position(l,i)*psi_local;
398  }
399  }
400 
401  //Find the dot product
402  double dot = 0.0;
403  for(unsigned k=0;k<2;k++) {dot += interpolated_x[k]*interpolated_n[k];}
404  residuals[local_eqn] += 0.5*dot*W*J;
405  }
406  } //End of additional jacobian terms
int i
Definition: BiCGSTAB_step_by_step.cpp:9
JacobiRotation< float > J
Definition: Jacobi_makeJacobi.cpp:3
double interpolated_x(const Vector< double > &s, const unsigned &i) const
Definition: elements.h:4528
double nodal_value(const unsigned &n, const unsigned &i) const
Definition: elements.h:2593
int nodal_local_eqn(const unsigned &n, const unsigned &i) const
Definition: elements.h:1432
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2210
double nodal_position(const unsigned &n, const unsigned &i) const
Definition: elements.h:2317
int ptraded_local_eqn()
Definition: marangoni_convection_box.cc:210
double bi()
Definition: marangoni_convection_box.cc:431
Scalar EIGEN_BLAS_FUNC_NAME() dot(int *n, Scalar *px, int *incx, Scalar *py, int *incy)
Definition: level1_real_impl.h:52
char char char int int * k
Definition: level2_impl.h:374
double Bi
Biot number.
Definition: thermal_fibre.cc:85
@ W
Definition: quadtree.h:63

References Global_Physical_Variables::Bi, dot(), i, J, k, and oomph::QuadTreeNames::W.

◆ bi()

template<class ELEMENT >
double oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::bi ( )
inline
431 {return *Bi_pt;}

◆ bi_pt()

template<class ELEMENT >
double* & oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::bi_pt ( )
inline
437 {return Bi_pt;}

◆ fill_in_contribution_to_jacobian()

template<class ELEMENT >
void oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::fill_in_contribution_to_jacobian ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inlineprotectedvirtual

Calculate the contribution to the jacobian.

Fill in the contribution to the residuals

Reimplemented from oomph::GeneralisedElement.

259  {
260  //Call the generic routine with the flag set to 1
261  this->fill_in_generic_residual_contribution_interface(residuals,jacobian,1);
262  {
263  //Use finite differences to handle temperature variations
264  const unsigned n_node = this->nnode();
265  //Find the number of dofs in the element
266  const unsigned n_dof = this->ndof();
267  //Create newres vector
268  Vector<double> newres(n_dof);
269 
270  //Integer storage for local unknown
271  int local_unknown=0;
272 
273  //Use the default finite difference step
274  const double fd_step = this->Default_fd_jacobian_step;
275 
276  //Loop over the nodes
277  for(unsigned n=0;n<n_node;n++)
278  {
279  //Get the number of values stored at the node
280  unsigned t_index = this->T_index;
281 
282  //Get the local equation number
283  local_unknown = this->nodal_local_eqn(n,t_index);
284  //If it's not pinned
285  if(local_unknown >= 0)
286  {
287  //Store a pointer to the nodal data value
288  double *value_pt = this->node_pt(n)->value_pt(t_index);
289 
290  //Save the old value of the Nodal data
291  double old_var = *value_pt;
292 
293  //Increment the value of the Nodal data
294  *value_pt += fd_step;
295 
296  //Calculate the new residuals
297  this->get_residuals(newres);
298 
299  //Do finite differences
300  for(unsigned m=0;m<n_dof;m++)
301  {
302  double sum = (newres[m] - residuals[m])/fd_step;
303  //Stick the entry into the Jacobian matrix
304  jacobian(m,local_unknown) = sum;
305  }
306 
307  //Reset the Nodal data
308  *value_pt = old_var;
309  }
310  }
311  }
312 
313  //Fill in the external data by finite differences
314  this->fill_in_jacobian_from_external_by_fd(jacobian);
315 
316  //Call the generic routine to handle the spine variables
317  this->fill_in_jacobian_from_geometric_data(jacobian);
318  }
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
double * value_pt(const unsigned &i) const
Definition: nodes.h:324
void fill_in_jacobian_from_geometric_data(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: element_with_moving_nodes.cc:323
Node *& node_pt(const unsigned &n)
Return a pointer to the local node n.
Definition: elements.h:2175
virtual void fill_in_generic_residual_contribution_interface(Vector< double > &residuals, DenseMatrix< double > &jacobian, unsigned flag)
Definition: interface_elements.cc:471
static double Default_fd_jacobian_step
Definition: elements.h:1198
unsigned ndof() const
Return the number of equations/dofs in the element.
Definition: elements.h:835
void fill_in_jacobian_from_external_by_fd(Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
Definition: elements.cc:1199
void get_residuals(Vector< double > &residuals)
Definition: hijacked_elements.h:377
int * m
Definition: level2_cplx_impl.h:294

References GlobalFct::get_residuals(), m, and n.

◆ ma()

template<class ELEMENT >
double oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::ma ( )
inline
433 {return *Ma_pt;}

◆ ma_pt()

template<class ELEMENT >
double* & oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::ma_pt ( )
inline
435 {return Ma_pt;}

◆ make_bounding_element()

template<class ELEMENT >
FluidInterfaceBoundingElement* oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::make_bounding_element ( const int face_index)
inlinevirtual

/ Overload the making of the edge element to create out volume constraint edge element

Reimplemented from oomph::SpineUpdateFluidInterfaceElement< FluidInterfaceElement, LineDerivatives, ELEMENT >.

474  {
475  //Create a temporary pointer to the appropriate FaceElement
478 
479  //Attach the geometrical information to the new element
480  this->build_face_element(face_index,Temp_pt);
481 
482  //Set the index at which the unknowns are stored from the element
484 
485  //Set the value of the nbulk_value, the node is not resized
486  //in this problem, so it will just be the actual nvalue
487  Temp_pt->nbulk_value(0) = Temp_pt->node_pt(0)->nvalue();
488 
489  //Set of unique geometric data that is used to update the bulk,
490  //but is not used to update the face
491  std::set<Data*> unique_additional_geom_data;
492  //Get all the geometric data for this (bulk) element
493  this->assemble_set_of_all_geometric_data(unique_additional_geom_data);
494 
495  //Now assemble the set of geometric data for the face element
496  std::set<Data*> unique_face_geom_data_pt;
497  Temp_pt->assemble_set_of_all_geometric_data(unique_face_geom_data_pt);
498  //Erase the face geometric data from the additional data
499  for(std::set<Data*>::iterator it=unique_face_geom_data_pt.begin();
500  it!=unique_face_geom_data_pt.end();++it)
501  {unique_additional_geom_data.erase(*it);}
502 
503  //Finally add all unique additional data as external data
504  for(std::set<Data*>::iterator it = unique_additional_geom_data.begin();
505  it!= unique_additional_geom_data.end();++it)
506  {
507  Temp_pt->add_external_data(*it);
508  }
509 
510  //Return the value of the pointer
511  return Temp_pt;
512  }
unsigned nvalue() const
Return number of values stored in data object (incl pinned ones).
Definition: nodes.h:483
void assemble_set_of_all_geometric_data(std::set< Data * > &unique_geom_data_pt)
Return a set of all geometric data associated with the element.
Definition: element_with_moving_nodes.cc:43
unsigned & nbulk_value(const unsigned &n)
Definition: elements.h:4845
virtual void build_face_element(const int &face_index, FaceElement *face_element_pt)
Definition: elements.cc:5132
Vector< unsigned > & u_index_interface_boundary()
Access for nodal index at which the velocity components are stored.
Definition: interface_elements.h:153
Vector< unsigned > U_index_interface
Nodal index at which the i-th velocity component is stored.
Definition: interface_elements.h:338
unsigned add_external_data(Data *const &data_pt, const bool &fd=true)
Definition: elements.cc:307
Definition: marangoni_convection_box.cc:85

References oomph::GeneralisedElement::add_external_data(), oomph::ElementWithMovingNodes::assemble_set_of_all_geometric_data(), oomph::FaceElement::nbulk_value(), oomph::FiniteElement::node_pt(), oomph::Data::nvalue(), and oomph::FluidInterfaceBoundingElement::u_index_interface_boundary().

◆ ptraded_local_eqn()

template<class ELEMENT >
int oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::ptraded_local_eqn ( )
inlineprivate

The local eqn number for the traded pressure, which is the variable that corresponds to this equation

211  {
212  if(Ptraded_data_pt==0) {return -1;}
213  else
214  {return this->external_local_eqn(
216  }
unsigned External_data_number_of_traded_pressure
Definition: marangoni_convection_box.cc:202
int external_local_eqn(const unsigned &i, const unsigned &j)
Definition: elements.h:311

◆ set_traded_pressure_data()

template<class ELEMENT >
void oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::set_traded_pressure_data ( Data traded_pressure_data_pt)
inline

Set the Data that contains the single pressure value that is "traded" for the volume constraint. The Data item must only contain a single value!

444  {
445 #ifdef PARANOID
446  if (traded_pressure_data_pt->nvalue()!=1)
447  {
448  std::ostringstream error_stream;
449  error_stream
450  << "The `traded` pressure Data must only contain a single value\n"
451  << "This one contains " << traded_pressure_data_pt->nvalue()
452  << std::endl;
453 
454  std::string function_name =
455  "FixedVolumeSpineLineFluidInterfaceElement::\n";
456  function_name += "set_traded_pressure_data()";
457 
458  throw OomphLibError(error_stream.str(),
461  }
462 #endif
463  // Store pointer explicitly
464  Ptraded_data_pt=traded_pressure_data_pt;
465  // Add the traded pressure to the external data.
466  // If it's a duplicate it will be reported as such
468  this->add_external_data(traded_pressure_data_pt);
469  }
Definition: oomph_definitions.h:222
std::string string(const unsigned &i)
Definition: oomph_definitions.cc:286
#define OOMPH_EXCEPTION_LOCATION
Definition: oomph_definitions.h:61
#define OOMPH_CURRENT_FUNCTION
Definition: oomph_definitions.h:86

References oomph::Data::nvalue(), OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION, and oomph::Global_string_for_annotation::string().

◆ sigma()

template<class ELEMENT >
double oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::sigma ( const Vector< double > &  s)
inlineprotectedvirtual

Overload the surface tension function.

Reimplemented from oomph::FluidInterfaceElement.

234  {
235  //Find the number of shape functions
236  const unsigned n_node = this->nnode();
237  //Now get the shape fuctions at the local coordinate
238  Shape psi(n_node);
239  this->shape(s,psi);
240 
241  double T = 0.0;
242  //Now interpolate the temperature
243  for(unsigned l=0;l<n_node;l++)
244  {
245  T += this->nodal_value(l,T_index)*psi(l);
246  }
247 
248  //Get the Marangoni and Capillary numbers
249  double Ma = this->ma();
250  double Ca = this->ca();
251  //Return the variable surface tension
252  return (1.0 - Ca*Ma*T);
253  }
virtual void shape(const Vector< double > &s, Shape &psi) const =0
double ma()
Definition: marangoni_convection_box.cc:433
const double & ca() const
The value of the Capillary number.
Definition: interface_elements.h:473
Definition: shape.h:76
double Ca
Capillary number.
Definition: fibre.cc:61
double Ma
Surfactant Parameters.
Definition: refineable_two_layer_soluble_surfactant.cc:127

References Global_Physical_Variables::Ca, oomph::Global_Physical_Variables::Ma, and oomph::OneDimLagrange::shape().

Member Data Documentation

◆ Bi_pt

template<class ELEMENT >
double* oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::Bi_pt
private

Pointer to a Biot number.

◆ Default_Physical_Constant_Value

template<class ELEMENT >
double oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::Default_Physical_Constant_Value = 1.0
staticprivate

Default value of the physical constants.

◆ External_data_number_of_traded_pressure

template<class ELEMENT >
unsigned oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::External_data_number_of_traded_pressure
private

The Data that contains the traded pressure is stored as external Data for the element. Which external Data item is it?

◆ Ma_pt

template<class ELEMENT >
double* oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::Ma_pt
private

Pointer to a Marangoni number.

◆ Ptraded_data_pt

template<class ELEMENT >
Data* oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::Ptraded_data_pt
private

Pointer to the Data item that stores the pressure that has been "traded" for the volume constraint in its single value.

◆ Ptraded_local_eqn

template<class ELEMENT >
int oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::Ptraded_local_eqn
private

value that has been traded for the volume constraint.

Integer to hold the local equation number for the single pressure

◆ T_index

template<class ELEMENT >
unsigned oomph::FixedVolumeSpineLineMarangoniFluidInterfaceElement< ELEMENT >::T_index
private

Index at which the temperature is stored at the nodes.


The documentation for this class was generated from the following file: