ScrewsymmetricIntersectionOfWalls Class Reference

Use ScrewsymmetricIntersectionOfWalls to define screwsymmetric walls, such as cylinders, cones, etc. More...

#include <ScrewsymmetricIntersectionOfWalls.h>

+ Inheritance diagram for ScrewsymmetricIntersectionOfWalls:

Public Member Functions

 ScrewsymmetricIntersectionOfWalls ()
 Default constructor. More...
 
 ScrewsymmetricIntersectionOfWalls (const ScrewsymmetricIntersectionOfWalls &p)
 Copy constructor. More...
 
 ScrewsymmetricIntersectionOfWalls (Vec3D position, Vec3D normal, std::vector< normalAndPosition > walls, const ParticleSpecies *species)
 Constructor setting values. More...
 
 ~ScrewsymmetricIntersectionOfWalls () override
 Destructor. More...
 
ScrewsymmetricIntersectionOfWallsoperator= (const ScrewsymmetricIntersectionOfWalls &other)
 Copy assignment operator. More...
 
ScrewsymmetricIntersectionOfWallscopy () const final
 Wall copy method. It calls the copy constructor of this Wall, useful for polymorphism. More...
 
bool getDistanceAndNormal (const BaseParticle &P, Mdouble &distance, Vec3D &normal_return) const final
 Computes the distance from the wall for a given BaseParticle and returns true if there is a collision. If there is a collision, also return the normal vector. More...
 
void computeNormalRadialDeltaN (const Vec3D &positionLabFrame, Vec3D &normalVector, Vec3D &radialVector, Mdouble &deltaN) const
 
Mdouble computeDeltaZ (const Vec3D &positionLabFrame, Mdouble h, Mdouble pitch) const
 
void read (std::istream &is) final
 reads wall More...
 
void write (std::ostream &os) const final
 outputs wall More...
 
std::string getName () const final
 Returns the name of the object. More...
 
void setAxis (Vec3D a)
 
void convertLimits (Vec3D &min, Vec3D &max) const
 
void writeVTK (VTKContainer &vtk) const override
 
void setRightHandedness (bool rightHandedness)
 
bool getRightHandedness () const
 
void setPitch (Mdouble pitch)
 
Mdouble getPitch () const
 
void setThickness (Mdouble thickness)
 
Mdouble getThickness () const
 
void setLength (Mdouble length)
 
Mdouble getLength () const
 
- Public Member Functions inherited from IntersectionOfWalls
 IntersectionOfWalls ()
 Default constructor. More...
 
 IntersectionOfWalls (const IntersectionOfWalls &other)
 Copy constructor. More...
 
 IntersectionOfWalls (const std::vector< normalAndPosition > &walls, const ParticleSpecies *species)
 Constructor setting values. More...
 
 ~IntersectionOfWalls () override
 Destructor. More...
 
IntersectionOfWallsoperator= (const IntersectionOfWalls &other)
 
void clear ()
 Removes all parts of the walls. More...
 
void setSpecies (const ParticleSpecies *species)
 sets species of subwalls as well More...
 
void setHandler (WallHandler *wallHandler) override
 A function which sets the WallHandler for this BaseWall. More...
 
unsigned int getNumberOfObjects ()
 Returns the number of objects. More...
 
void addObject (Vec3D normal, Vec3D point)
 Adds a wall to the set of infinite walls, given a normal vector pointing into the wall (i.e. out of the simulation domain), going through the point, so that normal*x=normal*point. More...
 
void addObject (Quaternion orientation, Vec3D position)
 
void add3PointObject (Vec3D PointA, Vec3D PointB, Vec3D PointC)
 
void setPointsAndLines (unsigned int n)
 
void addTetraSTL (Vec3D PointA, Vec3D PointB, Vec3D PointC, Vec3D WallNormal, Mdouble Thickness, int wallidentifier)
 constructs a tetrahedron for an STL file input More...
 
void addTetra (const Vec3D &PointA, const Vec3D &PointB, const Vec3D &PointC, Mdouble &Thickness)
 constructs a tetrahedron from 3 input coordinates More...
 
void addPlate (const Vec3D &PointA, const Vec3D &PointB, const Vec3D &PointC, const Vec3D &WallNormal, const Mdouble &Thickness, int wallidentifier)
 
MERCURYDPM_DEPRECATED void addObject (Vec3D normal, Mdouble position)
 Adds a wall to the set of finite walls, given an normal vector pointing into the wall (i.e. out of the flow domain), to give a plane defined by normal*x=position. More...
 
void createOpenPrism (std::vector< Vec3D > points, Vec3D prismAxis)
 Creates an open prism which is a polygon between the points, except the first and last point, and extends infinitely in the PrismAxis direction. Note that if you view from inside of your geometry, the shape formed by points has to be convex, otherwise it will not create the wall correctly. More...
 
void createPrism (std::vector< Vec3D > points, Vec3D prismAxis)
 Creates an open prism which is a polygon between the points and extends infinitely in the PrismAxis direction. Note that if you view from inside of your geometry, the shape formed by points has to be convex, otherwise it will not create the wall correctly. More...
 
void createOpenPrism (std::vector< Vec3D > points)
 Creates an open prism which is a polygon between the points, except the first and last point, and extends infinitely in the direction perpendicular to the first and second wall. Note that if you view from inside of your geometry, the shape formed by points has to be convex, otherwise it will not create the wall correctly. More...
 
void createPrism (std::vector< Vec3D > points)
 Creates an open prism which is a polygon between the points and extends infinitely in the direction perpendicular to the first and second wall. Note that if you view from inside of your geometry, the shape formed by points has to be convex, otherwise it will not create the wall correctly. More...
 
bool getDistanceAndNormal (const Vec3D &position, Mdouble wallInteractionRadius, Mdouble &distance, Vec3D &normal_return) const
 Compute the distance from the wall for a given BaseParticle and return if there is an interaction. If there is an interaction, also return the normal vector. More...
 
- Public Member Functions inherited from BaseWall
 BaseWall ()
 Default constructor. More...
 
 BaseWall (const BaseWall &w)
 Copy constructor. More...
 
 ~BaseWall () override
 Default destructor. More...
 
virtual bool getDistanceNormalOverlap (const BaseParticle &P, Mdouble &distance, Vec3D &normal_return, Mdouble &overlap) const
 
virtual bool getDistanceNormalOverlapSuperquadric (const SuperQuadricParticle &p, Mdouble &distance, Vec3D &normal_return, Mdouble &overlap) const
 
virtual Vec3D getFurthestPointSuperQuadric (const Vec3D &normalBodyFixed, const Vec3D &axes, Mdouble eps1, Mdouble eps2) const
 
WallHandlergetHandler () const
 A function which returns the WallHandler that handles this BaseWall. More...
 
void setIndSpecies (unsigned int indSpecies) override
 Define the species of this wall using the index of the species in the SpeciesHandler in this DPMBase. More...
 
void setSpecies (const ParticleSpecies *species)
 Defines the species of the current wall. More...
 
bool isFixed () const override
 
void setForceControl (Vec3D forceGoal, Vec3D gainFactor, Vec3D baseVelocity={0, 0, 0})
 Slowly adjusts the force on a wall towards a specified goal, by adjusting (prescribing) the velocity of the wall. More...
 
virtual bool isLocal (Vec3D &min, Vec3D &max) const
 
bool getLinePlaneIntersect (Vec3D &intersect, const Vec3D &p0, const Vec3D &p1, const Vec3D &n, const Vec3D &p)
 
bool isInsideWallVTK (const Vec3D &point, const Vec3D &normal, const Vec3D &position) const
 
void projectOntoWallVTK (Vec3D &point0, const Vec3D &point1, const Vec3D &normal, const Vec3D &position) const
 
void intersectVTK (std::vector< Vec3D > &points, Vec3D normal, Vec3D position) const
 
virtual BaseInteractiongetInteractionWithSuperQuad (SuperQuadricParticle *p, unsigned timeStamp, InteractionHandler *interactionHandler)
 
void getVTK (std::vector< Vec3D > &points, std::vector< std::vector< double >> &triangleStrips)
 
const Vec3D getAxis () const
 
BaseInteractiongetInteractionWith (BaseParticle *p, unsigned timeStamp, InteractionHandler *interactionHandler) override
 Returns the interaction between this wall and a given particle, nullptr if there is no interaction. More...
 
virtual void actionsOnRestart ()
 No implementation but can be overidden in its derived classes. More...
 
virtual void actionsAfterParticleGhostUpdate ()
 No implementation but can be overidden in its derived classes. More...
 
virtual void handleParticleAddition (unsigned int id, BaseParticle *p)
 Handles the addition of particles to the particleHandler. More...
 
virtual void handleParticleRemoval (unsigned int id)
 Handles the addition of particles to the particleHandler. More...
 
virtual void checkInteractions (InteractionHandler *interactionHandler, unsigned int timeStamp)
 Check if all interactions are valid. More...
 
bool getVTKVisibility () const
 
void setVTKVisibility (bool vtkVisibility)
 
void addRenderedWall (BaseWall *w)
 
BaseWallgetRenderedWall (size_t i) const
 
std::vector< BaseWall * > getRenderedWalls () const
 
void removeRenderedWalls ()
 
void renderWall (VTKContainer &vtk)
 
void addParticlesAtWall (unsigned numElements=50)
 
void setVelocityControl (Vec3D forceGoal, Vec3D gainFactor, Vec3D baseVelocity)
 
virtual void writeWallDetailsVTK (VTKData &data) const
 
virtual void computeWear ()
 
- Public Member Functions inherited from BaseInteractable
 BaseInteractable ()
 Default BaseInteractable constructor. More...
 
 BaseInteractable (const BaseInteractable &p)
 Copy constructor. More...
 
 ~BaseInteractable () override
 Destructor, it simply destructs the BaseInteractable and all the objects it contains. More...
 
unsigned int getIndSpecies () const
 Returns the index of the species associated with the interactable object. More...
 
const ParticleSpeciesgetSpecies () const
 Returns a pointer to the species of this BaseInteractable. More...
 
void setSpecies (const ParticleSpecies *species)
 Sets the species of this BaseInteractable. More...
 
const Vec3DgetForce () const
 Returns the force on this BaseInteractable. More...
 
const Vec3DgetTorque () const
 Returns the torque on this BaseInteractable. More...
 
void setForce (const Vec3D &force)
 Sets the force on this BaseInteractable. More...
 
void setTorque (const Vec3D &torque)
 Sets the torque on this BaseInteractable. More...
 
void addForce (const Vec3D &addForce)
 Adds an amount to the force on this BaseInteractable. More...
 
void addTorque (const Vec3D &addTorque)
 Adds an amount to the torque on this BaseInteractable. More...
 
virtual void resetForceTorque (int numberOfOMPthreads)
 
void sumForceTorqueOMP ()
 
const Vec3DgetPosition () const
 Returns the position of this BaseInteractable. More...
 
const QuaterniongetOrientation () const
 Returns the orientation of this BaseInteractable. More...
 
virtual void setPosition (const Vec3D &position)
 Sets the position of this BaseInteractable. More...
 
void setOrientationViaNormal (Vec3D normal)
 Sets the orientation of this BaseInteractable by defining the vector that results from the rotation of the (1,0,0) vector. More...
 
void setOrientationViaEuler (Vec3D eulerAngle)
 Sets the orientation of this BaseInteractable by defining the euler angles. More...
 
virtual void setOrientation (const Quaternion &orientation)
 Sets the orientation of this BaseInteractable. More...
 
virtual void move (const Vec3D &move)
 Moves this BaseInteractable by adding an amount to the position. More...
 
virtual void rotate (const Vec3D &angularVelocityDt)
 Rotates this BaseInteractable. More...
 
const std::vector< BaseInteraction * > & getInteractions () const
 Returns a list of interactions which belong to this interactable. More...
 
void addInteraction (BaseInteraction *I)
 Adds an interaction to this BaseInteractable. More...
 
bool removeInteraction (BaseInteraction *I)
 Removes an interaction from this BaseInteractable. More...
 
void copyInteractionsForPeriodicParticles (const BaseInteractable &p)
 Copies interactions to this BaseInteractable whenever a periodic copy made. More...
 
void setVelocity (const Vec3D &velocity)
 set the velocity of the BaseInteractable. More...
 
void setAngularVelocity (const Vec3D &angularVelocity)
 set the angular velocity of the BaseInteractble. More...
 
void addVelocity (const Vec3D &velocity)
 adds an increment to the velocity. More...
 
void addAngularVelocity (const Vec3D &angularVelocity)
 add an increment to the angular velocity. More...
 
virtual const Vec3DgetVelocity () const
 Returns the velocity of this interactable. More...
 
virtual const Vec3DgetAngularVelocity () const
 Returns the angular velocity of this interactable. More...
 
void setPrescribedPosition (const std::function< Vec3D(double)> &prescribedPosition)
 Allows the position of an infinite mass interactable to be prescribed. More...
 
void applyPrescribedPosition (double time)
 Computes the position from the user defined prescribed position function. More...
 
void setPrescribedVelocity (const std::function< Vec3D(double)> &prescribedVelocity)
 Allows the velocity of an infinite mass interactable to be prescribed. More...
 
void applyPrescribedVelocity (double time)
 Computes the velocity from the user defined prescribed velocity function. More...
 
void setPrescribedOrientation (const std::function< Quaternion(double)> &prescribedOrientation)
 Allows the orientation of the infinite mass interactbale to be prescribed. More...
 
void applyPrescribedOrientation (double time)
 Computes the orientation from the user defined prescribed orientation function. More...
 
void setPrescribedAngularVelocity (const std::function< Vec3D(double)> &prescribedAngularVelocity)
 Allows the angular velocity of the infinite mass interactable to be prescribed. More...
 
void applyPrescribedAngularVelocity (double time)
 Computes the angular velocity from the user defined prescribed angular velocity. More...
 
virtual const Vec3D getVelocityAtContact (const Vec3D &contact) const
 Returns the velocity at the contact point, use by many force laws. More...
 
void integrateBeforeForceComputation (double time, double timeStep)
 This is part of integrate routine for objects with infinite mass. More...
 
void integrateAfterForceComputation (double time, double timeStep)
 This is part of the integration routine for objects with infinite mass. More...
 
virtual Mdouble getInvMass () const
 
virtual Mdouble getCurvature (const Vec3D &labFixedCoordinates) const
 
virtual bool isFaceContact (const Vec3D &normal) const
 
- Public Member Functions inherited from BaseObject
 BaseObject ()=default
 Default constructor. More...
 
 BaseObject (const BaseObject &p)=default
 Copy constructor, copies all the objects BaseObject contains. More...
 
virtual ~BaseObject ()=default
 virtual destructor More...
 
virtual void moveInHandler (unsigned int index)
 Except that it is virtual, it does the same thing as setIndex() does. More...
 
void setIndex (unsigned int index)
 Allows one to assign an index to an object in the handler/container. More...
 
void setId (unsigned long id)
 Assigns a unique identifier to each object in the handler (container) which remains constant even after the object is deleted from the container/handler. More...
 
unsigned int getIndex () const
 Returns the index of the object in the handler. More...
 
unsigned int getId () const
 Returns the unique identifier of any particular object. More...
 
void setGroupId (unsigned groupId)
 
unsigned getGroupId () const
 

Public Attributes

bool rightHandedness_ = true
 The right handedness of the screw, i.e. the direction of the screw-blade. More...
 

Private Attributes

Mdouble pitch_ = 1
 
Mdouble thickness_ = 0
 The thickness of the screw blade. More...
 
Mdouble length_ = 1
 The length of the screw. More...
 

Additional Inherited Members

- Static Public Member Functions inherited from BaseWall
static void addToVTK (const std::vector< Vec3D > &points, VTKContainer &vtk)
 Takes the points provided and adds a triangle strip connecting these points to the vtk container. More...
 
- Protected Attributes inherited from IntersectionOfWalls
std::vector< InfiniteWallwallObjects_
 The wall "segments"/directions that together make up the finite wall. More...
 
std::vector< Vec3DC_
 A vector that stores the intersection point of three different InfiniteWall. More...
 

Detailed Description

Use ScrewsymmetricIntersectionOfWalls to define screwsymmetric walls, such as cylinders, cones, etc.

An ScrewsymmetricIntersectionOfWalls is equivalent to an IntersectionOfWalls where the Cartesian coordinate system (x,y,z) is replaced by a cylindrical coordinate system \((\hat{r},\theta,\hat{z})\). The origin and orientation of the cylindrical coordinate system is defined by the position and orientation of the wall, respectively.

In other words, a particle touches an ScrewsymmetricIntersectionOfWalls, if it touches the IntersectionOfWalls object in the \((r,\theta,z)\) coordinate system.

Thus, you need to define:

  • the position p of the wall, which is also the origin of the cylindrical coordinate system
  • the orientation o of the wall, which is the \(\hat{z}\) direction of the cylindrical coordinate system
  • a set of walls in the \((\hat{r},\theta,\hat{z})\) coordinate system, defined by a normal n and position p. Only screwsymmetric objects can be defined, thus the \(\theta \) value of the normals has to be zero.

Example 1

Say you want to define a cylindrical wall as in the left image below. If you define the origin and orientation of the cylindrical coordinate system as *(0,0,0)* and *(0,0,1)*, respectively, then the cylinder is a rectangle in the cylindrical coordinate system. Thus, you need to intersect three walls, with normals and position as indicated in the right figure below.

A cylindric wall that repels particles

The following code defines such a cylinder:

w.setSpecies(species);
w.setPosition(Vec3D(0,0,0));
w.setOrientation(Vec3D(0,0,1));
//arguments of addObject are normal and position of the intersected walls
w.addObject(Vec3D(-1,0,0), Vec3D(1,0,0)); //Cylindric wall
w.addObject(Vec3D(0,0,1), Vec3D(.5,0,-1)); //Bottom wall
w.addObject(Vec3D(0,0,-1), Vec3D(.5,0,1)); //Top wall
wallHandler.copyAndAddObject(w);
RowVector3d w
Definition: Matrix_resize_int.cpp:3
Use ScrewsymmetricIntersectionOfWalls to define screwsymmetric walls, such as cylinders,...
Definition: ScrewsymmetricIntersectionOfWalls.h:105
Definition: Kernel/Math/Vector.h:30

Example 2

Note, one can also define a cylindric casing that can be filled with particles, see image below.

A cylindric casing that can be filled with particles

In this case, you don't have to intersect the walls; instead you need to create three separate walls. A sample code:

w.setSpecies(species);
w.setPosition(Vec3D(0,0,0));
w.setOrientation(Vec3D(0,0,1));
w.addObject(Vec3D(1,0,0), Vec3D(1,0,0)); //Cylindric wall
wallHandler.copyAndAddObject(w);
w1.set(Vec3D(0,0,-1), Vec3D(0,0,-1)); //Bottom wall
wallHandler.copyAndAddObject(w1);
w1.set(Vec3D(0,0,1), Vec3D(0,0,1)); //Top wall
wallHandler.copyAndAddObject(w1);
A infinite wall fills the half-space {point: (position_-point)*normal_<=0}.
Definition: InfiniteWall.h:27
void set(Vec3D normal, Vec3D point)
Defines a standard wall, given an outward normal vector s.t. normal*x=normal*point for all x of the w...
Definition: InfiniteWall.cc:97

Example 3

Say you want a cylindrical casing with an outflow at the base. In this case, you need to define three walls:

  • The outer cylinder of radius R, height H
  • The flat top wall
  • A bottom wall which is a outer cylinder of radius r<R, with a flat top wall at z=0
A cylindric casing that can be filled with particles

This can be done as follows:

double R = 2;
double H = 1;
double r = 1;
w.setSpecies(species);
w.setPosition(Vec3D(0,0,0));
w.setOrientation(Vec3D(0,0,1));
//normal and position of the outer shell in cylindrical coordinates
w.addObject(Vec3D(1,0,0), Vec3D(R,0,0));
wallHandler.copyAndAddObject(w);
w1.set(Vec3D(0,0,1), Vec3D(0,0,H)); //Top wall
w0.setSpecies(species);
w0.setPosition(Vec3D(0,0,0));
w0.setOrientation(Vec3D(0,0,1));
// bottom wall is an intersection of two walls, an outer cylinder of radius r and a flat top wall at z=0
w0.addObject(Vec3D(1,0,0), Vec3D(r,0,0));
w0.addObject(Vec3D(0,0,1), Vec3D(r,0,0));
wallHandler.copyAndAddObject(w0);
MatrixXf H
Definition: HessenbergDecomposition_matrixH.cpp:4
@ R
Definition: StatisticsVector.h:21
virtual void setOrientation(const Quaternion &orientation)
Sets the orientation of this BaseInteractable.
Definition: BaseInteractable.h:239
virtual void setPosition(const Vec3D &position)
Sets the position of this BaseInteractable.
Definition: BaseInteractable.h:218
void addObject(Vec3D normal, Vec3D point)
Adds a wall to the set of infinite walls, given a normal vector pointing into the wall (i....
Definition: IntersectionOfWalls.cc:117
void setSpecies(const ParticleSpecies *species)
sets species of subwalls as well
Definition: IntersectionOfWalls.cc:51
r
Definition: UniformPSDSelfTest.py:20

For a demonstration on how to use this class, see Flow through a 3D hourglass/silo.

Constructor & Destructor Documentation

◆ ScrewsymmetricIntersectionOfWalls() [1/3]

ScrewsymmetricIntersectionOfWalls::ScrewsymmetricIntersectionOfWalls ( )

Default constructor.

12 {
13  logger(ERROR, "ScrewsymmetricIntersectionOfWalls() is not yet completely implemented");
14  logger(DEBUG, "ScrewsymmetricIntersectionOfWalls() finished");
15 }
Logger< MERCURYDPM_LOGLEVEL > logger("MercuryKernel")
Definition of different loggers with certain modules. A user can define its own custom logger here.
@ ERROR
@ DEBUG

References DEBUG, ERROR, and logger.

Referenced by copy().

◆ ScrewsymmetricIntersectionOfWalls() [2/3]

ScrewsymmetricIntersectionOfWalls::ScrewsymmetricIntersectionOfWalls ( const ScrewsymmetricIntersectionOfWalls other)

Copy constructor.

Parameters
[in]otherThe ScrewsymmetricIntersectionOfWalls that must be copied.
21  : IntersectionOfWalls(other)
22 {
23  logger(ERROR, "ScrewsymmetricIntersectionOfWalls() is not yet completely implemented");
24  logger(DEBUG, "ScrewsymmetricIntersectionOfWalls(const ScrewsymmetricIntersectionOfWalls &p) finished");
25 }
IntersectionOfWalls()
Default constructor.
Definition: IntersectionOfWalls.cc:12

References DEBUG, ERROR, and logger.

◆ ScrewsymmetricIntersectionOfWalls() [3/3]

ScrewsymmetricIntersectionOfWalls::ScrewsymmetricIntersectionOfWalls ( Vec3D  position,
Vec3D  normal,
std::vector< normalAndPosition walls,
const ParticleSpecies species 
)

Constructor setting values.

30  : IntersectionOfWalls(walls, species)
31 {
32  logger(ERROR, "ScrewsymmetricIntersectionOfWalls() is not yet completely implemented");
33  setPosition(position);
34  setOrientationViaNormal(orientation);
35 }
void setOrientationViaNormal(Vec3D normal)
Sets the orientation of this BaseInteractable by defining the vector that results from the rotation o...
Definition: BaseInteractable.cc:177

References ERROR, logger, BaseInteractable::setOrientationViaNormal(), and BaseInteractable::setPosition().

◆ ~ScrewsymmetricIntersectionOfWalls()

ScrewsymmetricIntersectionOfWalls::~ScrewsymmetricIntersectionOfWalls ( )
override

Destructor.

38 {
39  logger(DEBUG, "~ScrewsymmetricIntersectionOfWalls() finished.");
40 }

References DEBUG, and logger.

Member Function Documentation

◆ computeDeltaZ()

Mdouble ScrewsymmetricIntersectionOfWalls::computeDeltaZ ( const Vec3D positionLabFrame,
Mdouble  h,
Mdouble  pitch 
) const

Auxiliary function that computes the oriented axial distance between the particle's centre and the blade centre

Parameters
[in]positionLabFramedistance between the starting point of the screw, start_, and the particle position (Vec3D)
[in]hThe rescaled length of the screw (length_/(2*pi*numberOfTurns_)) (Mdouble > 0)
[in]pitchThe pitch length of the screw (length_/numberOfTurns_) (Mdouble > 0)
Returns
oriented axial distance between the particle's centre and the blade centre
189 {
190  // oriented axial distance between the particle's centre and the blade centre
191  Mdouble deltaZ;
192 
193  // normal to the blade at the particle position
194  if (rightHandedness_) // right-handed thread
195  {
196  // angular coordinate of the particle
197  // IMPORTANT: this angle needs to be defined in the interval [0, +2*pi[ radians!
198  Mdouble xi = atan2(positionLabFrame.Y, positionLabFrame.X);
199  if (xi < 0.0)
200  xi += 2.0 * constants::pi;
201 
202  deltaZ = fmod(positionLabFrame.Z - h * (xi + getOrientation().getAxis().Z) -
203  static_cast<int> (positionLabFrame.Z / pitch), pitch);
204  logger(DEBUG, "xi: %, deltaZ: %", xi, deltaZ);
205  }
206  else // left-handed thread
207  {
208  // angular coordinate of the particle
209  // IMPORTANT: this angle needs to be defined in the interval [0, +2*pi[ radians!
210  Mdouble xi = atan2(-positionLabFrame.Y, positionLabFrame.X);
211  if (xi < 0.0)
212  xi += 2.0 * constants::pi;
213  xi += 0.5 * constants::pi;
214  xi = fmod(xi, 2.0 * constants::pi);
215 
216  deltaZ = fmod(positionLabFrame.Z - h * (xi + 0.5 * constants::pi - getOrientation().getAxis().Z) -
217  static_cast<int> (positionLabFrame.Z / pitch), pitch);
218  logger(DEBUG, "xi: %, deltaZ: %", xi, deltaZ);
219  }
220 
221  if (deltaZ > 0.5 * pitch)
222  {
223  deltaZ -= pitch;
224  }
225  else if (deltaZ < -0.5 * pitch)
226  {
227  deltaZ += pitch;
228  }
229  return deltaZ;
230 }
AnnoyingScalar atan2(const AnnoyingScalar &y, const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:139
const Quaternion & getOrientation() const
Returns the orientation of this BaseInteractable.
Definition: BaseInteractable.h:209
const Vec3D getAxis() const
Definition: BaseWall.cc:485
bool rightHandedness_
The right handedness of the screw, i.e. the direction of the screw-blade.
Definition: ScrewsymmetricIntersectionOfWalls.h:184
Mdouble Y
Definition: Kernel/Math/Vector.h:45
Mdouble Z
Definition: Kernel/Math/Vector.h:45
Mdouble X
the vector components
Definition: Kernel/Math/Vector.h:45
#define Z
Definition: icosphere.cpp:21
EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC bfloat16 fmod(const bfloat16 &a, const bfloat16 &b)
Definition: BFloat16.h:648
const Mdouble pi
Definition: ExtendedMath.h:23

References atan2(), DEBUG, Eigen::bfloat16_impl::fmod(), BaseWall::getAxis(), BaseInteractable::getOrientation(), logger, constants::pi, rightHandedness_, Vec3D::X, Vec3D::Y, Z, and Vec3D::Z.

Referenced by computeNormalRadialDeltaN().

◆ computeNormalRadialDeltaN()

void ScrewsymmetricIntersectionOfWalls::computeNormalRadialDeltaN ( const Vec3D positionLabFrame,
Vec3D normalVector,
Vec3D radialVector,
Mdouble deltaN 
) const

Computes the normal and radial vector for the screw at the position of the particle. Furthermore, it also computes deltaN, which is component of the particle-blade centre distance normal to the blade surface

Parameters
[in]pparticle whose position is used to compute the vectors and distance to the blade
[out]normalVectorthe vector in (x,y,z)-direction that points perpendicular to the screw blade
[out]radialVectorthe vector in (x,y)-direction that points outward from shaft to particle
[out]deltaNcomponent of the particle-blade_center distance normal to the blade surface
133 {
134  // radial position of the particle
135  const Mdouble rho = std::sqrt(positionLabFrame.X * positionLabFrame.X
136  + positionLabFrame.Y * positionLabFrame.Y);
137 
138  // The rescaled length of the screw (length_/(2*pi*numberOfTurns_)).
139  const Mdouble h = 0.5 * pitch_ / constants::pi;
140 
141  // The pitch length of the screw (length_/numberOfTurns_).
142  const Mdouble deltaZ = computeDeltaZ(positionLabFrame, h, pitch_);
143 
144 
145  // trigonometric functions relative to the particle angle
146  const Mdouble cosXi = positionLabFrame.X / rho;
147  const Mdouble sinXi = positionLabFrame.Y / rho;
148  if (rightHandedness_)
149  {
150  normalVector.X = h * sinXi;
151  normalVector.Y = -h * cosXi;
152  normalVector.Z = rho;
153  }
154  else
155  {
156  normalVector.X = -h * cosXi;
157  normalVector.Y = h * sinXi;
158  normalVector.Z = rho;
159  }
160 
161  // takes the right direction (+/-) of the vector and normalizes
162  normalVector *= -deltaZ;
163  normalVector /= normalVector.getLength();
164 
165  // radial vector at the particle position
166  radialVector.X = cosXi;
167  radialVector.Y = sinXi;
168  radialVector.Z = 0.0;
169 
170  // The half-thickness of the screw.
171  const Mdouble delta = 0.5 * thickness_;
172 
173  // cosine of the helix angle at the particle position
174  const Mdouble cosEta = 1.0 / std::sqrt(1.0 + (h * h / rho / rho));
175 
176  // component of the particle-blade_center distance normal to the blade surface
177  deltaN = fabs(deltaZ) * cosEta - delta;
178 }
AnnoyingScalar sqrt(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:134
Mdouble pitch_
Definition: ScrewsymmetricIntersectionOfWalls.h:201
Mdouble computeDeltaZ(const Vec3D &positionLabFrame, Mdouble h, Mdouble pitch) const
Definition: ScrewsymmetricIntersectionOfWalls.cc:188
Mdouble thickness_
The thickness of the screw blade.
Definition: ScrewsymmetricIntersectionOfWalls.h:204
static Mdouble getLength(const Vec3D &a)
Calculates the length of a Vec3D: .
Definition: Vector.cc:350
int delta
Definition: MultiOpt.py:96
Real fabs(const Real &a)
Definition: boostmultiprec.cpp:117

References computeDeltaZ(), MultiOpt::delta, boost::multiprecision::fabs(), Vec3D::getLength(), constants::pi, pitch_, rightHandedness_, sqrt(), thickness_, Vec3D::X, Vec3D::Y, and Vec3D::Z.

Referenced by getDistanceAndNormal().

◆ convertLimits()

void ScrewsymmetricIntersectionOfWalls::convertLimits ( Vec3D min,
Vec3D max 
) const

converts XYZ limits into RZ limits, to properly limit the VTK plotting area.

264 {
266  Vec3D rMin = min - getPosition();
267  q.rotateBack(rMin); //set min/max initial values to values of first corner point
268  Vec3D rMax = max - getPosition();
269  q.rotateBack(rMax); //set min/max initial values to values of first corner point
270 
271  Mdouble r = std::sqrt(std::max(rMax.Y * rMax.Y + rMax.Z * rMax.Z, rMin.Y * rMin.Y + rMin.Z * rMin.Z));
272  max = Vec3D(r, 0.001, std::max(rMin.X,rMax.X));
273  min = Vec3D(0, 0, std::min(rMin.X,rMax.X));
274  //std::cout << "r=" << r << std::endl;
275 }
const Vec3D & getPosition() const
Returns the position of this BaseInteractable.
Definition: BaseInteractable.h:197
This class contains the 4 components of a quaternion and the standard operators and functions needed ...
Definition: Kernel/Math/Quaternion.h:42
#define min(a, b)
Definition: datatypes.h:22
#define max(a, b)
Definition: datatypes.h:23
EIGEN_DEVICE_FUNC const Scalar & q
Definition: SpecialFunctionsImpl.h:2019

References BaseInteractable::getOrientation(), BaseInteractable::getPosition(), max, min, Eigen::numext::q, UniformPSDSelfTest::r, sqrt(), Vec3D::X, Vec3D::Y, and Vec3D::Z.

Referenced by writeVTK().

◆ copy()

ScrewsymmetricIntersectionOfWalls * ScrewsymmetricIntersectionOfWalls::copy ( ) const
finalvirtual

Wall copy method. It calls the copy constructor of this Wall, useful for polymorphism.

Returns
pointer to a IntersectionOfWalls object allocated using new.

Reimplemented from IntersectionOfWalls.

62 {
63  return new ScrewsymmetricIntersectionOfWalls(*this);
64 }
ScrewsymmetricIntersectionOfWalls()
Default constructor.
Definition: ScrewsymmetricIntersectionOfWalls.cc:11

References ScrewsymmetricIntersectionOfWalls().

Referenced by operator=().

◆ getDistanceAndNormal()

bool ScrewsymmetricIntersectionOfWalls::getDistanceAndNormal ( const BaseParticle p,
Mdouble distance,
Vec3D normal_return 
) const
finalvirtual

Computes the distance from the wall for a given BaseParticle and returns true if there is a collision. If there is a collision, also return the normal vector.

First, the particle is translated by the vector position_, then the distance normal and tangential to the orientation is computed. This normal and tangential direction is interpreted as the x and z coordinate. With the particle shifted into the XZ plane, the distance and normal is computed, as if the ScrewsymmetricIntersectionOfWalls would be a simple IntersectionOfWalls. Finally, the object and the normal is rotated back to the original position.

See also ScrewsymmetricIntersectionOfWalls for details.

Reimplemented from IntersectionOfWalls.

77 {
78  // squared radial position of the particle
79  const Vec3D positionLabFrame = p.getPosition() - getPosition();
80  const Mdouble rho2 = positionLabFrame.X * positionLabFrame.X + positionLabFrame.Y * positionLabFrame.Y;
81 
82  // should thickness be added here?
83  // const Mdouble wallInteractionRadius = p.getWallInteractionRadius(this) + thickness_;
84 
85  // if the particle is outside the cylinder containing the screw there is no collision
86  if (//rho2 > square(rMax_ + wallInteractionRadius) ||
87  positionLabFrame.Z > length_ + p.getWallInteractionRadius(this) ||
88  positionLabFrame.Z < -p.getWallInteractionRadius(this))
89  {
90  return false;
91  }
92  Vec3D normalVector;
93  Vec3D radialVector;
94  Mdouble deltaN;
95  // positionLabFrame = normalVector + radialVector + axialVector
96  computeNormalRadialDeltaN(positionLabFrame, normalVector, radialVector, deltaN);
97 
98  // radial position of the particle
99  const Mdouble r = std::sqrt(rho2);
100 
101  //determine wall distance, normal and contact in axissymmetric coordinates
102  //and transform from axisymmetric coordinates
103  Vec3D normalRN;
104  if (!IntersectionOfWalls::getDistanceAndNormal(Vec3D(r, 0, deltaN), p.getWallInteractionRadius(this), distance, normalRN))
105  {
106  //if not in contact
107  return false;
108  }
109  else
110  {
111  //if in contact
112  if (r != 0)
113  radialVector /= r;
114  else //in this case the tangential vector is irrelevant
115  logger(WARN, "Warning: Particle % is exactly on the symmetry axis of wall %", p.getIndex(), getIndex());
116  //normal_Return = normalVector.Z * deltaN + normalVector.X * r;
117  normal_return = normalRN.Z * normalVector + normalRN.X * radialVector;
118  normal_return.normalise();
119  return true;
120  }
121 }
@ WARN
float * p
Definition: Tutorial_Map_using.cpp:9
unsigned int getIndex() const
Returns the index of the object in the handler.
Definition: BaseObject.h:97
bool getDistanceAndNormal(const BaseParticle &p, Mdouble &distance, Vec3D &normal_return) const override
Compute the distance from the wall for a given BaseParticle and return if there is a collision....
Definition: IntersectionOfWalls.cc:511
Mdouble length_
The length of the screw.
Definition: ScrewsymmetricIntersectionOfWalls.h:207
void computeNormalRadialDeltaN(const Vec3D &positionLabFrame, Vec3D &normalVector, Vec3D &radialVector, Mdouble &deltaN) const
Definition: ScrewsymmetricIntersectionOfWalls.cc:131
void normalise()
Makes this Vec3D unit length.
Definition: Vector.cc:103

References computeNormalRadialDeltaN(), IntersectionOfWalls::getDistanceAndNormal(), BaseObject::getIndex(), BaseInteractable::getPosition(), length_, logger, Vec3D::normalise(), p, UniformPSDSelfTest::r, sqrt(), WARN, Vec3D::X, Vec3D::Y, and Vec3D::Z.

◆ getLength()

Mdouble ScrewsymmetricIntersectionOfWalls::getLength ( ) const
inline
181 {return length_;}

References length_.

◆ getName()

std::string ScrewsymmetricIntersectionOfWalls::getName ( ) const
finalvirtual

Returns the name of the object.

Returns
The string "ScrewsymmetricIntersectionOfWalls".

Reimplemented from IntersectionOfWalls.

254 {
255  return "ScrewsymmetricIntersectionOfWalls";
256 }

◆ getPitch()

Mdouble ScrewsymmetricIntersectionOfWalls::getPitch ( ) const
inline
175 {return pitch_;}

References pitch_.

◆ getRightHandedness()

bool ScrewsymmetricIntersectionOfWalls::getRightHandedness ( ) const
inline
172 {return rightHandedness_;}

References rightHandedness_.

◆ getThickness()

Mdouble ScrewsymmetricIntersectionOfWalls::getThickness ( ) const
inline
178 {return thickness_;}

References thickness_.

◆ operator=()

ScrewsymmetricIntersectionOfWalls & ScrewsymmetricIntersectionOfWalls::operator= ( const ScrewsymmetricIntersectionOfWalls other)

Copy assignment operator.

Parameters
[in]otherThe ScrewsymmetricIntersectionOfWalls that must be copied.
47 {
48  if (this == &other)
49  {
50  return *this;
51  }
52  else
53  {
54  return *(other.copy());
55  }
56 }
ScrewsymmetricIntersectionOfWalls * copy() const final
Wall copy method. It calls the copy constructor of this Wall, useful for polymorphism.
Definition: ScrewsymmetricIntersectionOfWalls.cc:61

References copy().

◆ read()

void ScrewsymmetricIntersectionOfWalls::read ( std::istream &  is)
finalvirtual

reads wall

Parameters
[in]isThe input stream from which the ScrewsymmetricIntersectionOfWalls is read, usually a restart file.

Reimplemented from IntersectionOfWalls.

237 {
239 }
void read(std::istream &is) override
Move the IntersectionOfWalls to a new position, which is a Vec3D from the old position.
Definition: IntersectionOfWalls.cc:725

References IntersectionOfWalls::read().

◆ setAxis()

void ScrewsymmetricIntersectionOfWalls::setAxis ( Vec3D  a)
259 {
261 }
const Scalar * a
Definition: level2_cplx_impl.h:32

References a, and BaseInteractable::setOrientationViaNormal().

◆ setLength()

void ScrewsymmetricIntersectionOfWalls::setLength ( Mdouble  length)
inline
180 {length_=length;}

References length_.

◆ setPitch()

void ScrewsymmetricIntersectionOfWalls::setPitch ( Mdouble  pitch)
inline
174 {pitch_=pitch;}

References pitch_.

◆ setRightHandedness()

void ScrewsymmetricIntersectionOfWalls::setRightHandedness ( bool  rightHandedness)
inline
171 {rightHandedness_=rightHandedness;}

References rightHandedness_.

◆ setThickness()

void ScrewsymmetricIntersectionOfWalls::setThickness ( Mdouble  thickness)
inline
177 {thickness_=thickness;}

References thickness_.

◆ write()

void ScrewsymmetricIntersectionOfWalls::write ( std::ostream &  os) const
finalvirtual

outputs wall

Parameters
[in]osThe output stream where the ScrewsymmetricIntersectionOfWalls must be written to, usually a restart file.

Reimplemented from IntersectionOfWalls.

246 {
248 }
void write(std::ostream &os) const override
Writes an IntersectionOfWalls to an output stream, for example a restart file.
Definition: IntersectionOfWalls.cc:755

References IntersectionOfWalls::write().

◆ writeVTK()

void ScrewsymmetricIntersectionOfWalls::writeVTK ( VTKContainer vtk) const
overridevirtual

adds extra information to the points and triangleStrips vectors needed to plot the wall in vtk format

Parameters
pointsCoordinates of the vertices of the triangulated surfaces (in the VTK file this is called POINTS)
triangleStripsIndices of three vertices forming one triangulated surface (in the VTK file this is called CELL)
Bug:
once the quaternions are implemented, we can orient these walls properly

Reimplemented from IntersectionOfWalls.

278 {
279  for (auto wall = wallObjects_.begin(); wall != wallObjects_.end(); wall++)
280  {
281  //plot each of the intersecting walls
282  std::vector<Vec3D> myPoints;
283 
284  //first create a slice of non-rotated wall in the xz plane, 0<y<1
288 
289  //create the basic slice for the first wall using the InfiniteWall routine
290  wall->createVTK(myPoints, min, max);
291 
292  //create intersections with the other walls, similar to the IntersectionOfWalls routine
293  for (auto other = wallObjects_.begin(); other != wallObjects_.end(); other++)
294  {
295  if (other != wall)
296  {
297  intersectVTK(myPoints, -other->getNormal(), other->getPosition());
298  }
299  }
300 
301  //only keep the y=0 values
302  std::vector<Vec3D> rzVec;
303  for (auto& p: myPoints)
304  {
305  if (p.Y == 0)
306  {
307  rzVec.push_back(p);
308  }
309  }
310  if (rzVec.empty())
311  return;
312 
313  //create points on the unit circle
314  unsigned nr = 180;
315  struct XY
316  {
317  double X;
318  double Y;
319  };
320  std::vector<XY> xyVec;
321  for (unsigned ir = 0; ir < nr; ir++)
322  {
323  Mdouble angle = 2.0 * constants::pi * ir / nr;
324  xyVec.push_back({cos(angle), sin(angle)});
325  }
326 
327  //now create rings of points on the axisym. shape
329  unsigned long nPoints = vtk.points.size();
330  Vec3D p;
331  //Vec3D o = getOrientation().getAxis();
332  for (auto rz : rzVec)
333  {
334  for (auto xy : xyVec)
335  {
336  p = Vec3D(rz.Z, rz.X * xy.X, rz.X * xy.Y);
338  p += getPosition();
339  vtk.points.push_back(p);
340  }
341  }
342 
343  //finally create the connectivity matri to plot shell-like triangle strips.
344  unsigned long nz = rzVec.size();
345  for (unsigned iz = 0; iz < nz - 1; iz++)
346  {
347  std::vector<double> cell;
348  cell.reserve(2 * nr + 2);
349  for (unsigned ir = 0; ir < nr; ir++)
350  {
351  cell.push_back(nPoints + ir + iz * nr);
352  cell.push_back(nPoints + ir + (iz + 1) * nr);
353  }
354  cell.push_back(nPoints + iz * nr);
355  cell.push_back(nPoints + (iz + 1) * nr);
356  vtk.triangleStrips.push_back(cell);
357  }
358  }
359 
360 }
AnnoyingScalar cos(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:136
AnnoyingScalar sin(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:137
Matrix< float, 2, 1 > xy
Definition: LLT_solve.cpp:6
@ XY
Definition: StatisticsVector.h:21
DPMBase * getDPMBase()
Gets the problem that is solved using this handler.
Definition: BaseHandler.h:733
void intersectVTK(std::vector< Vec3D > &points, Vec3D normal, Vec3D position) const
Definition: BaseWall.cc:220
WallHandler * getHandler() const
A function which returns the WallHandler that handles this BaseWall.
Definition: BaseWall.cc:113
Vec3D getMax() const
Returns the maximum coordinates of the problem domain.
Definition: DPMBase.h:659
Vec3D getMin() const
Returns the minimum coordinates of the problem domain.
Definition: DPMBase.h:653
std::vector< InfiniteWall > wallObjects_
The wall "segments"/directions that together make up the finite wall.
Definition: IntersectionOfWalls.h:198
void rotate(Vec3D &position) const
Definition: Quaternion.cc:550
void convertLimits(Vec3D &min, Vec3D &max) const
Definition: ScrewsymmetricIntersectionOfWalls.cc:263
#define X
Definition: icosphere.cpp:20
double angle(const double &t)
Angular position as a function of time t.
Definition: jeffery_orbit.cc:98
const unsigned nz
Definition: ConstraintElementsUnitTest.cpp:32
std::vector< std::vector< double > > triangleStrips
Definition: BaseWall.h:19
std::vector< Vec3D > points
Definition: BaseWall.h:18
const char Y
Definition: test/EulerAngles.cpp:32

References Jeffery_Solution::angle(), convertLimits(), cos(), BaseHandler< T >::getDPMBase(), BaseWall::getHandler(), DPMBase::getMax(), DPMBase::getMin(), BaseInteractable::getOrientation(), BaseInteractable::getPosition(), BaseWall::intersectVTK(), max, min, Mesh_Parameters::nz, p, constants::pi, VTKContainer::points, Quaternion::rotate(), sin(), VTKContainer::triangleStrips, IntersectionOfWalls::wallObjects_, X, xy, XY, and Y.

Member Data Documentation

◆ length_

Mdouble ScrewsymmetricIntersectionOfWalls::length_ = 1
private

The length of the screw.

Referenced by getDistanceAndNormal(), getLength(), and setLength().

◆ pitch_

Mdouble ScrewsymmetricIntersectionOfWalls::pitch_ = 1
private

axial length of one rotation

Referenced by computeNormalRadialDeltaN(), getPitch(), and setPitch().

◆ rightHandedness_

bool ScrewsymmetricIntersectionOfWalls::rightHandedness_ = true

The right handedness of the screw, i.e. the direction of the screw-blade.

Referenced by computeDeltaZ(), computeNormalRadialDeltaN(), getRightHandedness(), and setRightHandedness().

◆ thickness_

Mdouble ScrewsymmetricIntersectionOfWalls::thickness_ = 0
private

The thickness of the screw blade.

Referenced by computeNormalRadialDeltaN(), getThickness(), and setThickness().


The documentation for this class was generated from the following files: