RefineableBuoyantQCrouzeixRaviartElement< DIM > Class Template Reference
+ Inheritance diagram for RefineableBuoyantQCrouzeixRaviartElement< DIM >:

Public Member Functions

 RefineableBuoyantQCrouzeixRaviartElement ()
 
unsigned required_nvalue (const unsigned &n) const
 
const doublera () const
 Access function for the Rayleigh number (const version) More...
 
double *& ra_pt ()
 Access function for the pointer to the Rayleigh number. More...
 
void disable_ALE ()
 Final override for disable ALE. More...
 
void enable_ALE ()
 Final override for enable ALE. More...
 
unsigned nscalar_paraview () const
 
void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
std::string scalar_name_paraview (const unsigned &i) const
 
void output (ostream &outfile)
 Overload the standard output function with the broken default. More...
 
void output (ostream &outfile, const unsigned &nplot)
 
void output (FILE *file_pt)
 C-style output function: Broken default. More...
 
void output (FILE *file_pt, const unsigned &n_plot)
 C-style output function: Broken default. More...
 
void output_fct (ostream &outfile, const unsigned &Nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 Output function for an exact solution: Broken default. More...
 
void output_fct (ostream &outfile, const unsigned &Nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 
unsigned u_index_adv_diff () const
 
unsigned nvertex_node () const
 
Nodevertex_node_pt (const unsigned &j) const
 
unsigned ncont_interpolated_values () const
 
void get_interpolated_values (const Vector< double > &s, Vector< double > &values)
 
void get_interpolated_values (const unsigned &t, const Vector< double > &s, Vector< double > &values)
 
void further_setup_hanging_nodes ()
 
void rebuild_from_sons (Mesh *&mesh_pt)
 
void further_build ()
 
unsigned nrecovery_order ()
 The recovery order is that of the NavierStokes elements. More...
 
unsigned ncompound_fluxes ()
 
unsigned num_Z2_flux_terms ()
 
void get_Z2_flux (const Vector< double > &s, Vector< double > &flux)
 Get the Z2 flux from the fluid element. More...
 
void get_Z2_compound_flux_indices (Vector< unsigned > &flux_index)
 
void compute_error (ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void get_wind_adv_diff (const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &wind) const
 
void get_body_force_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &result)
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Fill in the constituent elements' contribution to the residual vector. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
void fill_in_off_diagonal_jacobian_blocks_analytic (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
unsigned ndof_types () const
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned > > &dof_lookup_list) const
 
- Public Member Functions inherited from oomph::RefineableQAdvectionDiffusionElement< DIM, 3 >
 RefineableQAdvectionDiffusionElement ()
 Empty Constructor: More...
 
 RefineableQAdvectionDiffusionElement (const RefineableQAdvectionDiffusionElement< DIM, NNODE_1D > &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableQAdvectionDiffusionElement< DIM, NNODE_1D > &)=delete
 Broken assignment operator. More...
 
unsigned ncont_interpolated_values () const
 Number of continuously interpolated values: 1. More...
 
unsigned nvertex_node () const
 Number of vertex nodes in the element. More...
 
Nodevertex_node_pt (const unsigned &j) const
 Pointer to the j-th vertex node in the element. More...
 
void rebuild_from_sons (Mesh *&mesh_pt)
 Rebuild from sons: empty. More...
 
unsigned nrecovery_order ()
 
void further_setup_hanging_nodes ()
 
- Public Member Functions inherited from oomph::QAdvectionDiffusionElement< DIM, NNODE_1D >
 QAdvectionDiffusionElement ()
 
 QAdvectionDiffusionElement (const QAdvectionDiffusionElement< DIM, NNODE_1D > &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const QAdvectionDiffusionElement< DIM, NNODE_1D > &)=delete
 Broken assignment operator. More...
 
unsigned required_nvalue (const unsigned &n) const
 
void output (std::ostream &outfile)
 
void output (std::ostream &outfile, const unsigned &n_plot)
 
void output (FILE *file_pt)
 
void output (FILE *file_pt, const unsigned &n_plot)
 
void output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 
void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 
- Public Member Functions inherited from oomph::AdvectionDiffusionEquations< DIM >
 AdvectionDiffusionEquations ()
 
 AdvectionDiffusionEquations (const AdvectionDiffusionEquations &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const AdvectionDiffusionEquations &)=delete
 Broken assignment operator. More...
 
double du_dt_adv_diff (const unsigned &n) const
 
void disable_ALE ()
 
void enable_ALE ()
 
unsigned nscalar_paraview () const
 
void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
std::string scalar_name_paraview (const unsigned &i) const
 
void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 Get error against and norm of exact solution. More...
 
void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Dummy, time dependent error checker. More...
 
AdvectionDiffusionSourceFctPtsource_fct_pt ()
 Access function: Pointer to source function. More...
 
AdvectionDiffusionSourceFctPt source_fct_pt () const
 Access function: Pointer to source function. Const version. More...
 
AdvectionDiffusionWindFctPtwind_fct_pt ()
 Access function: Pointer to wind function. More...
 
AdvectionDiffusionWindFctPt wind_fct_pt () const
 Access function: Pointer to wind function. Const version. More...
 
const doublepe () const
 Peclet number. More...
 
double *& pe_pt ()
 Pointer to Peclet number. More...
 
const doublepe_st () const
 Peclet number multiplied by Strouhal number. More...
 
double *& pe_st_pt ()
 Pointer to Peclet number multipled by Strouha number. More...
 
virtual void get_source_adv_diff (const unsigned &ipt, const Vector< double > &x, double &source) const
 
void get_flux (const Vector< double > &s, Vector< double > &flux) const
 Get flux: \(\mbox{flux}[i] = \mbox{d}u / \mbox{d}x_i \). More...
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Add the element's contribution to its residual vector (wrapper) More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
double interpolated_u_adv_diff (const Vector< double > &s) const
 Return FE representation of function value u(s) at local coordinate s. More...
 
unsigned self_test ()
 Self-test: Return 0 for OK. More...
 
- Public Member Functions inherited from oomph::FiniteElement
void set_dimension (const unsigned &dim)
 
void set_nodal_dimension (const unsigned &nodal_dim)
 
void set_nnodal_position_type (const unsigned &nposition_type)
 Set the number of types required to interpolate the coordinate. More...
 
void set_n_node (const unsigned &n)
 
int nodal_local_eqn (const unsigned &n, const unsigned &i) const
 
double dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const
 
 FiniteElement ()
 Constructor. More...
 
virtual ~FiniteElement ()
 
 FiniteElement (const FiniteElement &)=delete
 Broken copy constructor. More...
 
virtual bool local_coord_is_valid (const Vector< double > &s)
 Broken assignment operator. More...
 
virtual void move_local_coord_back_into_element (Vector< double > &s) const
 
void get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const
 
virtual void local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
 
virtual void local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
 
virtual double local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt)
 
MacroElementmacro_elem_pt ()
 Access function to pointer to macro element. More...
 
void get_x (const Vector< double > &s, Vector< double > &x) const
 
void get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const
 
virtual void get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void set_integration_scheme (Integral *const &integral_pt)
 Set the spatial integration scheme. More...
 
Integral *const & integral_pt () const
 Return the pointer to the integration scheme (const version) More...
 
virtual void shape (const Vector< double > &s, Shape &psi) const =0
 
virtual void shape_at_knot (const unsigned &ipt, Shape &psi) const
 
virtual void dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
 
virtual void dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const
 
virtual void d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual void d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual double J_eulerian (const Vector< double > &s) const
 
virtual double J_eulerian_at_knot (const unsigned &ipt) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
void check_jacobian (const double &jacobian) const
 
double dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const
 
double d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual double d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual void describe_local_dofs (std::ostream &out, const std::string &current_string) const
 
virtual void describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const
 
virtual void assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)
 
Node *& node_pt (const unsigned &n)
 Return a pointer to the local node n. More...
 
Node *const & node_pt (const unsigned &n) const
 Return a pointer to the local node n (const version) More...
 
unsigned nnode () const
 Return the number of nodes. More...
 
virtual unsigned nnode_1d () const
 
double raw_nodal_position (const unsigned &n, const unsigned &i) const
 
double raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position (const unsigned &n, const unsigned &i) const
 
double nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double dnodal_position_dt (const unsigned &n, const unsigned &i) const
 Return the i-th component of nodal velocity: dx/dt at local node n. More...
 
double dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
unsigned nnodal_position_type () const
 
bool has_hanging_nodes () const
 
unsigned nodal_dimension () const
 Return the required Eulerian dimension of the nodes in this element. More...
 
virtual Nodeconstruct_node (const unsigned &n)
 
virtual Nodeconstruct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
virtual Nodeconstruct_boundary_node (const unsigned &n)
 
virtual Nodeconstruct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
int get_node_number (Node *const &node_pt) const
 
virtual Nodeget_node_at_local_coordinate (const Vector< double > &s) const
 
double raw_nodal_value (const unsigned &n, const unsigned &i) const
 
double raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
unsigned dim () const
 
virtual ElementGeometry::ElementGeometry element_geometry () const
 Return the geometry type of the element (either Q or T usually). More...
 
virtual double interpolated_x (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated coordinate x[i] at local coordinate s. More...
 
virtual double interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual void interpolated_x (const Vector< double > &s, Vector< double > &x) const
 Return FE interpolated position x[] at local coordinate s as Vector. More...
 
virtual void interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const
 
virtual double interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)
 
virtual void interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)
 
unsigned ngeom_data () const
 
Datageom_data_pt (const unsigned &j)
 
void position (const Vector< double > &zeta, Vector< double > &r) const
 
void position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const
 
void dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)
 
virtual double zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const
 
void interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const
 
void locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)
 
virtual void node_update ()
 
virtual void identify_geometric_data (std::set< Data * > &geometric_data_pt)
 
virtual double s_min () const
 Min value of local coordinate. More...
 
virtual double s_max () const
 Max. value of local coordinate. More...
 
double size () const
 
virtual double compute_physical_size () const
 
void point_output (std::ostream &outfile, const Vector< double > &s)
 
virtual unsigned nplot_points_paraview (const unsigned &nplot) const
 
virtual unsigned nsub_elements_paraview (const unsigned &nplot) const
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const
 
virtual void write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
 Output a time-dependent exact solution over the element. More...
 
virtual void get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
 
virtual std::string tecplot_zone_string (const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const
 
virtual unsigned nplot_points (const unsigned &nplot) const
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)
 
void integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
 Integrate Vector-valued function over element. More...
 
void integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
 Integrate Vector-valued time-dep function over element. More...
 
virtual void build_face_element (const int &face_index, FaceElement *face_element_pt)
 
virtual unsigned get_bulk_node_number (const int &face_index, const unsigned &i) const
 
virtual int face_outer_unit_normal_sign (const int &face_index) const
 Get the sign of the outer unit normal on the face given by face_index. More...
 
virtual unsigned nnode_on_face () const
 
void face_node_number_error_check (const unsigned &i) const
 Range check for face node numbers. More...
 
virtual CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt (const int &face_index) const
 
virtual BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt (const int &face_index) const
 
- Public Member Functions inherited from oomph::GeneralisedElement
 GeneralisedElement ()
 Constructor: Initialise all pointers and all values to zero. More...
 
virtual ~GeneralisedElement ()
 Virtual destructor to clean up any memory allocated by the object. More...
 
 GeneralisedElement (const GeneralisedElement &)=delete
 Broken copy constructor. More...
 
void operator= (const GeneralisedElement &)=delete
 Broken assignment operator. More...
 
Data *& internal_data_pt (const unsigned &i)
 Return a pointer to i-th internal data object. More...
 
Data *const & internal_data_pt (const unsigned &i) const
 Return a pointer to i-th internal data object (const version) More...
 
Data *& external_data_pt (const unsigned &i)
 Return a pointer to i-th external data object. More...
 
Data *const & external_data_pt (const unsigned &i) const
 Return a pointer to i-th external data object (const version) More...
 
unsigned long eqn_number (const unsigned &ieqn_local) const
 
int local_eqn_number (const unsigned long &ieqn_global) const
 
unsigned add_external_data (Data *const &data_pt, const bool &fd=true)
 
bool external_data_fd (const unsigned &i) const
 
void exclude_external_data_fd (const unsigned &i)
 
void include_external_data_fd (const unsigned &i)
 
void flush_external_data ()
 Flush all external data. More...
 
void flush_external_data (Data *const &data_pt)
 Flush the object addressed by data_pt from the external data array. More...
 
unsigned ninternal_data () const
 Return the number of internal data objects. More...
 
unsigned nexternal_data () const
 Return the number of external data objects. More...
 
unsigned ndof () const
 Return the number of equations/dofs in the element. More...
 
void dof_vector (const unsigned &t, Vector< double > &dof)
 Return the vector of dof values at time level t. More...
 
void dof_pt_vector (Vector< double * > &dof_pt)
 Return the vector of pointers to dof values. More...
 
void set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)
 
virtual void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void complete_setup_of_dependencies ()
 
virtual void get_residuals (Vector< double > &residuals)
 
virtual void get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
virtual void get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
virtual void get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Public Member Functions inherited from oomph::GeomObject
 GeomObject ()
 Default constructor. More...
 
 GeomObject (const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)
 
 GeomObject (const GeomObject &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const GeomObject &)=delete
 Broken assignment operator. More...
 
virtual ~GeomObject ()
 (Empty) destructor More...
 
unsigned nlagrangian () const
 Access function to # of Lagrangian coordinates. More...
 
unsigned ndim () const
 Access function to # of Eulerian coordinates. More...
 
void set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
 Set # of Lagrangian and Eulerian coordinates. More...
 
TimeStepper *& time_stepper_pt ()
 
TimeSteppertime_stepper_pt () const
 
virtual void position (const double &t, const Vector< double > &zeta, Vector< double > &r) const
 
virtual void dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const
 
virtual void d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const
 
virtual void d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const
 
- Public Member Functions inherited from oomph::RefineableAdvectionDiffusionEquations< DIM >
 RefineableAdvectionDiffusionEquations ()
 Empty Constructor. More...
 
 RefineableAdvectionDiffusionEquations (const RefineableAdvectionDiffusionEquations< DIM > &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableAdvectionDiffusionEquations< DIM > &)=delete
 Broken assignment operator. More...
 
unsigned num_Z2_flux_terms ()
 Number of 'flux' terms for Z2 error estimation. More...
 
void get_Z2_flux (const Vector< double > &s, Vector< double > &flux)
 
void get_interpolated_values (const Vector< double > &s, Vector< double > &values)
 
void get_interpolated_values (const unsigned &t, const Vector< double > &s, Vector< double > &values)
 
void further_build ()
 Further build: Copy source function pointer from father element. More...
 
void dinterpolated_u_adv_diff_ddata (const Vector< double > &s, Vector< double > &du_ddata, Vector< unsigned > &global_eqn_number)
 
- Public Member Functions inherited from oomph::RefineableElement
 RefineableElement ()
 
virtual ~RefineableElement ()
 Destructor, delete the allocated storage for the hanging equations. More...
 
 RefineableElement (const RefineableElement &)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableElement &)=delete
 Broken assignment operator. More...
 
Treetree_pt ()
 Access function: Pointer to quadtree representation of this element. More...
 
void set_tree_pt (Tree *my_tree_pt)
 Set pointer to quadtree representation of this element. More...
 
virtual unsigned required_nsons () const
 
bool refinement_is_enabled ()
 Flag to indicate suppression of any refinement. More...
 
void disable_refinement ()
 Suppress of any refinement for this element. More...
 
void enable_refinement ()
 Emnable refinement for this element. More...
 
template<class ELEMENT >
void split (Vector< ELEMENT * > &son_pt) const
 
int local_hang_eqn (Node *const &node_pt, const unsigned &i)
 
virtual void build (Mesh *&mesh_pt, Vector< Node * > &new_node_pt, bool &was_already_built, std::ofstream &new_nodes_file)=0
 
void set_refinement_level (const int &refine_level)
 Set the refinement level. More...
 
unsigned refinement_level () const
 Return the Refinement level. More...
 
void select_for_refinement ()
 Select the element for refinement. More...
 
void deselect_for_refinement ()
 Deselect the element for refinement. More...
 
void select_sons_for_unrefinement ()
 Unrefinement will be performed by merging the four sons of this element. More...
 
void deselect_sons_for_unrefinement ()
 
bool to_be_refined ()
 Has the element been selected for refinement? More...
 
bool sons_to_be_unrefined ()
 Has the element been selected for unrefinement? More...
 
virtual void unbuild ()
 
virtual void deactivate_element ()
 
virtual bool nodes_built ()
 Return true if all the nodes have been built, false if not. More...
 
long number () const
 Element number (for debugging/plotting) More...
 
void set_number (const long &mynumber)
 Set element number (for debugging/plotting) More...
 
virtual Nodeinterpolating_node_pt (const unsigned &n, const int &value_id)
 
virtual double local_one_d_fraction_of_interpolating_node (const unsigned &n1d, const unsigned &i, const int &value_id)
 
virtual Nodeget_interpolating_node_at_local_coordinate (const Vector< double > &s, const int &value_id)
 
virtual unsigned ninterpolating_node (const int &value_id)
 
virtual unsigned ninterpolating_node_1d (const int &value_id)
 
virtual void interpolating_basis (const Vector< double > &s, Shape &psi, const int &value_id) const
 
virtual void check_integrity (double &max_error)=0
 
void identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)
 
void assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual RefineableElementroot_element_pt ()
 
virtual RefineableElementfather_element_pt () const
 Return a pointer to the father element. More...
 
void get_father_at_refinement_level (unsigned &refinement_level, RefineableElement *&father_at_reflevel_pt)
 
virtual void initial_setup (Tree *const &adopted_father_pt=0, const unsigned &initial_p_order=0)
 
virtual void pre_build (Mesh *&mesh_pt, Vector< Node * > &new_node_pt)
 Pre-build the element. More...
 
virtual void setup_hanging_nodes (Vector< std::ofstream * > &output_stream)
 
unsigned nshape_controlling_nodes ()
 
std::map< Node *, unsignedshape_controlling_node_lookup ()
 
- Public Member Functions inherited from oomph::ElementWithZ2ErrorEstimator
 ElementWithZ2ErrorEstimator ()
 Default empty constructor. More...
 
 ElementWithZ2ErrorEstimator (const ElementWithZ2ErrorEstimator &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithZ2ErrorEstimator &)=delete
 Broken assignment operator. More...
 
virtual void compute_exact_Z2_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_flux_pt, double &error, double &norm)
 
virtual double geometric_jacobian (const Vector< double > &x)
 
- Public Member Functions inherited from oomph::RefineableQElement< DIM >
 RefineableQElement ()
 Empty constuctor. More...
 
- Public Member Functions inherited from oomph::RefineableQCrouzeixRaviartElement< DIM >
 RefineableQCrouzeixRaviartElement ()
 Constructor. More...
 
 RefineableQCrouzeixRaviartElement (const RefineableQCrouzeixRaviartElement< DIM > &dummy)=delete
 Broken copy constructor. More...
 
unsigned ncont_interpolated_values () const
 Broken assignment operator. More...
 
void rebuild_from_sons (Mesh *&mesh_pt)
 
unsigned nrecovery_order ()
 
unsigned nvertex_node () const
 Number of vertex nodes in the element. More...
 
Nodevertex_node_pt (const unsigned &j) const
 Pointer to the j-th vertex node in the element. More...
 
void get_interpolated_values (const Vector< double > &s, Vector< double > &values)
 
void get_interpolated_values (const unsigned &t, const Vector< double > &s, Vector< double > &values)
 
void further_setup_hanging_nodes ()
 
void further_build ()
 
void build_fp_press_adv_diff_robin_bc_element (const unsigned &face_index)
 
void identify_load_data (std::set< std::pair< Data *, unsigned >> &paired_load_data)
 
void rebuild_from_sons (Mesh *&mesh_pt)
 2D Rebuild from sons: Reconstruct pressure from the (merged) sons More...
 
void rebuild_from_sons (Mesh *&mesh_pt)
 3D Rebuild from sons: Reconstruct pressure from the (merged) sons More...
 
void further_build ()
 
void further_build ()
 
- Public Member Functions inherited from oomph::QCrouzeixRaviartElement< DIM >
 QCrouzeixRaviartElement ()
 Constructor, there are DIM+1 internal values (for the pressure) More...
 
void pshape_nst (const Vector< double > &s, Shape &psi) const
 Pressure shape functions at local coordinate s. More...
 
void pshape_nst (const Vector< double > &s, Shape &psi, Shape &test) const
 Pressure shape and test functions at local coordinte s. More...
 
double p_nst (const unsigned &i) const
 
double p_nst (const unsigned &t, const unsigned &i) const
 
unsigned npres_nst () const
 Return number of pressure values. More...
 
double dpshape_and_dptest_eulerian_nst (const Vector< double > &s, Shape &ppsi, DShape &dppsidx, Shape &ptest, DShape &dptestdx) const
 
int p_local_eqn (const unsigned &n) const
 Return the local equation numbers for the pressure values. More...
 
void fix_pressure (const unsigned &p_dof, const double &p_value)
 Pin p_dof-th pressure dof and set it to value specified by p_value. More...
 
void identify_pressure_data (std::set< std::pair< Data *, unsigned >> &paired_pressure_data)
 
void output (std::ostream &outfile)
 Redirect output to NavierStokesEquations output. More...
 
void output (std::ostream &outfile, const unsigned &nplot)
 Redirect output to NavierStokesEquations output. More...
 
void output (FILE *file_pt)
 Redirect output to NavierStokesEquations output. More...
 
void output (FILE *file_pt, const unsigned &nplot)
 Redirect output to NavierStokesEquations output. More...
 
void full_output (std::ostream &outfile)
 
void full_output (std::ostream &outfile, const unsigned &nplot)
 
unsigned ndof_types () const
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const
 
void pshape_nst (const Vector< double > &s, Shape &psi) const
 
double dpshape_and_dptest_eulerian_nst (const Vector< double > &s, Shape &ppsi, DShape &dppsidx, Shape &ptest, DShape &dptestdx) const
 
void pshape_nst (const Vector< double > &s, Shape &psi) const
 
double dpshape_and_dptest_eulerian_nst (const Vector< double > &s, Shape &ppsi, DShape &dppsidx, Shape &ptest, DShape &dptestdx) const
 
- Public Member Functions inherited from oomph::NavierStokesEquations< DIM >
 NavierStokesEquations ()
 
const doublere () const
 Reynolds number. More...
 
const doublere_st () const
 Product of Reynolds and Strouhal number (=Womersley number) More...
 
double *& re_pt ()
 Pointer to Reynolds number. More...
 
double *& re_st_pt ()
 Pointer to product of Reynolds and Strouhal number (=Womersley number) More...
 
const doubleviscosity_ratio () const
 
double *& viscosity_ratio_pt ()
 Pointer to Viscosity Ratio. More...
 
const doubledensity_ratio () const
 
double *& density_ratio_pt ()
 Pointer to Density ratio. More...
 
const doublere_invfr () const
 Global inverse Froude number. More...
 
double *& re_invfr_pt ()
 Pointer to global inverse Froude number. More...
 
const Vector< double > & g () const
 Vector of gravitational components. More...
 
Vector< double > *& g_pt ()
 Pointer to Vector of gravitational components. More...
 
NavierStokesBodyForceFctPtbody_force_fct_pt ()
 Access function for the body-force pointer. More...
 
NavierStokesBodyForceFctPt body_force_fct_pt () const
 Access function for the body-force pointer. Const version. More...
 
NavierStokesSourceFctPtsource_fct_pt ()
 Access function for the source-function pointer. More...
 
NavierStokesSourceFctPt source_fct_pt () const
 Access function for the source-function pointer. Const version. More...
 
NavierStokesPressureAdvDiffSourceFctPtsource_fct_for_pressure_adv_diff ()
 
NavierStokesPressureAdvDiffSourceFctPt source_fct_for_pressure_adv_diff () const
 
intpinned_fp_pressure_eqn ()
 
double u_nst (const unsigned &n, const unsigned &i) const
 
double u_nst (const unsigned &t, const unsigned &n, const unsigned &i) const
 
virtual unsigned u_index_nst (const unsigned &i) const
 
unsigned n_u_nst () const
 
double du_dt_nst (const unsigned &n, const unsigned &i) const
 
void disable_ALE ()
 
void enable_ALE ()
 
virtual int p_nodal_index_nst () const
 
double pressure_integral () const
 Integral of pressure over element. More...
 
double dissipation () const
 Return integral of dissipation over element. More...
 
double dissipation (const Vector< double > &s) const
 Return dissipation at local coordinate s. More...
 
void get_vorticity (const Vector< double > &s, Vector< double > &vorticity) const
 Compute the vorticity vector at local coordinate s. More...
 
void get_vorticity (const Vector< double > &s, double &vorticity) const
 Compute the scalar vorticity at local coordinate s (2D) More...
 
double kin_energy () const
 Get integral of kinetic energy over element. More...
 
double d_kin_energy_dt () const
 Get integral of time derivative of kinetic energy over element. More...
 
void strain_rate (const Vector< double > &s, DenseMatrix< double > &strain_rate) const
 Strain-rate tensor: 1/2 (du_i/dx_j + du_j/dx_i) More...
 
void get_traction (const Vector< double > &s, const Vector< double > &N, Vector< double > &traction)
 
void get_traction (const Vector< double > &s, const Vector< double > &N, Vector< double > &traction_p, Vector< double > &traction_visc_n, Vector< double > &traction_visc_t)
 
void get_load (const Vector< double > &s, const Vector< double > &N, Vector< double > &load)
 
unsigned nscalar_paraview () const
 
void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
std::string scalar_name_paraview (const unsigned &i) const
 
void full_output (std::ostream &outfile)
 
void full_output (std::ostream &outfile, const unsigned &nplot)
 
void output_veloc (std::ostream &outfile, const unsigned &nplot, const unsigned &t)
 
void output_vorticity (std::ostream &outfile, const unsigned &nplot)
 
void output_fct (std::ostream &outfile, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 
void output_fct (std::ostream &outfile, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 
void compute_norm (double &norm)
 Compute norm of solution: square of the L2 norm of the velocities. More...
 
void compute_norm (Vector< double > &norm)
 Compute the vector norm of the FEM solution. More...
 
void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Compute the element's residual Vector. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
void fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 Compute the element's residual Vector. More...
 
void fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
void fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
void fill_in_pressure_advection_diffusion_residuals (Vector< double > &residuals)
 
void fill_in_pressure_advection_diffusion_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void pin_all_non_pressure_dofs (std::map< Data *, std::vector< int >> &eqn_number_backup)
 Pin all non-pressure dofs and backup eqn numbers. More...
 
void output_pressure_advection_diffusion_robin_elements (std::ostream &outfile)
 
void delete_pressure_advection_diffusion_robin_elements ()
 
void interpolated_u_nst (const Vector< double > &s, Vector< double > &veloc) const
 Compute vector of FE interpolated velocity u at local coordinate s. More...
 
double interpolated_u_nst (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated velocity u[i] at local coordinate s. More...
 
double interpolated_u_nst (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual double interpolated_p_nst (const Vector< double > &s) const
 Return FE interpolated pressure at local coordinate s. More...
 
double interpolated_p_nst (const unsigned &t, const Vector< double > &s) const
 Return FE interpolated pressure at local coordinate s at time level t. More...
 
double interpolated_dudx_nst (const Vector< double > &s, const unsigned &i, const unsigned &j) const
 
void point_output_data (const Vector< double > &s, Vector< double > &data)
 
void get_vorticity (const Vector< double > &s, Vector< double > &vorticity) const
 
void get_vorticity (const Vector< double > &s, double &vorticity) const
 
void get_vorticity (const Vector< double > &s, Vector< double > &vorticity) const
 Compute 3D vorticity vector at local coordinate s. More...
 
- Public Member Functions inherited from oomph::FSIFluidElement
 FSIFluidElement ()
 Constructor. More...
 
 FSIFluidElement (const FSIFluidElement &)=delete
 Broken copy constructor. More...
 
void operator= (const FSIFluidElement &)=delete
 Broken assignment operator. More...
 
- Public Member Functions inherited from oomph::TemplateFreeNavierStokesEquationsBase
 TemplateFreeNavierStokesEquationsBase ()
 Constructor (empty) More...
 
virtual ~TemplateFreeNavierStokesEquationsBase ()
 Virtual destructor (empty) More...
 
- Public Member Functions inherited from oomph::NavierStokesElementWithDiagonalMassMatrices
 NavierStokesElementWithDiagonalMassMatrices ()
 Empty constructor. More...
 
virtual ~NavierStokesElementWithDiagonalMassMatrices ()
 Virtual destructor. More...
 
 NavierStokesElementWithDiagonalMassMatrices (const NavierStokesElementWithDiagonalMassMatrices &)=delete
 Broken copy constructor. More...
 
void operator= (const NavierStokesElementWithDiagonalMassMatrices &)=delete
 Broken assignment operator. More...
 
- Public Member Functions inherited from oomph::RefineableNavierStokesEquations< DIM >
 RefineableNavierStokesEquations ()
 Constructor. More...
 
virtual Nodepressure_node_pt (const unsigned &n_p)
 
void get_pressure_and_velocity_mass_matrix_diagonal (Vector< double > &press_mass_diag, Vector< double > &veloc_mass_diag, const unsigned &which_one=0)
 
unsigned num_Z2_flux_terms ()
 Number of 'flux' terms for Z2 error estimation. More...
 
void get_Z2_flux (const Vector< double > &s, Vector< double > &flux)
 
void dinterpolated_u_nst_ddata (const Vector< double > &s, const unsigned &i, Vector< double > &du_ddata, Vector< unsigned > &global_eqn_number)
 

Private Member Functions

double Default_Physical_Constant_Value
 Set the default value of the Rayleigh number to be zero. More...
 
double Default_Physical_Constant_Value
 Set the default value of the Rayleigh number to be zero. More...
 
double Default_Physical_Constant_Value
 

Private Attributes

doubleRa_pt
 Pointer to a new physical variable, the Rayleigh number. More...
 

Static Private Attributes

static double Default_Physical_Constant_Value
 The static default value of the Rayleigh number. More...
 

Additional Inherited Members

- Public Types inherited from oomph::AdvectionDiffusionEquations< DIM >
typedef void(* AdvectionDiffusionSourceFctPt) (const Vector< double > &x, double &f)
 
typedef void(* AdvectionDiffusionWindFctPt) (const Vector< double > &x, Vector< double > &wind)
 
- Public Types inherited from oomph::FiniteElement
typedef void(* SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)
 
typedef void(* UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)
 
- Public Types inherited from oomph::NavierStokesEquations< DIM >
typedef void(* NavierStokesBodyForceFctPt) (const double &time, const Vector< double > &x, Vector< double > &body_force)
 
typedef double(* NavierStokesSourceFctPt) (const double &time, const Vector< double > &x)
 
typedef double(* NavierStokesPressureAdvDiffSourceFctPt) (const Vector< double > &x)
 
- Static Public Member Functions inherited from oomph::RefineableElement
static doublemax_integrity_tolerance ()
 Max. allowed discrepancy in element integrity check. More...
 
- Static Public Member Functions inherited from oomph::RefineableNavierStokesEquations< DIM >
static void pin_redundant_nodal_pressures (const Vector< GeneralisedElement * > &element_pt)
 
static void unpin_all_pressure_dofs (const Vector< GeneralisedElement * > &element_pt)
 Unpin all pressure dofs in elements listed in vector. More...
 
- Static Public Attributes inherited from oomph::FiniteElement
static double Tolerance_for_singular_jacobian = 1.0e-16
 Tolerance below which the jacobian is considered singular. More...
 
static bool Accept_negative_jacobian = false
 
static bool Suppress_output_while_checking_for_inverted_elements
 
- Static Public Attributes inherited from oomph::GeneralisedElement
static bool Suppress_warning_about_repeated_internal_data
 
static bool Suppress_warning_about_repeated_external_data = true
 
static double Default_fd_jacobian_step = 1.0e-8
 
- Static Public Attributes inherited from oomph::NavierStokesEquations< DIM >
static Vector< doubleGamma
 Vector to decide whether the stress-divergence form is used or not. More...
 
- Protected Member Functions inherited from oomph::QAdvectionDiffusionElement< DIM, NNODE_1D >
double dshape_and_dtest_eulerian_adv_diff (const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_adv_diff (const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
- Protected Member Functions inherited from oomph::FiniteElement
template<unsigned DIM>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual void dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<unsigned DIM>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
virtual void d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<unsigned DIM>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
virtual void transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
void transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
virtual void transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
void fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_nodal_fd ()
 
virtual void reset_after_nodal_fd ()
 
virtual void update_in_nodal_fd (const unsigned &i)
 
virtual void reset_in_nodal_fd (const unsigned &i)
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 One-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Two-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
- Protected Member Functions inherited from oomph::GeneralisedElement
unsigned add_internal_data (Data *const &data_pt, const bool &fd=true)
 
bool internal_data_fd (const unsigned &i) const
 
void exclude_internal_data_fd (const unsigned &i)
 
void include_internal_data_fd (const unsigned &i)
 
void clear_global_eqn_numbers ()
 
void add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)
 
virtual void assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void assign_additional_local_eqn_numbers ()
 
int internal_local_eqn (const unsigned &i, const unsigned &j) const
 
int external_local_eqn (const unsigned &i, const unsigned &j)
 
void fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
virtual void update_before_internal_fd ()
 
virtual void reset_after_internal_fd ()
 
virtual void update_in_internal_fd (const unsigned &i)
 
virtual void reset_in_internal_fd (const unsigned &i)
 
virtual void update_before_external_fd ()
 
virtual void reset_after_external_fd ()
 
virtual void update_in_external_fd (const unsigned &i)
 
virtual void reset_in_external_fd (const unsigned &i)
 
virtual void fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Protected Member Functions inherited from oomph::RefineableAdvectionDiffusionEquations< DIM >
void fill_in_generic_residual_contribution_adv_diff (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
 
- Protected Member Functions inherited from oomph::RefineableElement
void assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const
 
void assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const
 
void assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const
 
double local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
void assign_hanging_local_eqn_numbers (const bool &store_local_dof_pt)
 Assign the local equation numbers for hanging node variables. More...
 
virtual void fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
- Protected Member Functions inherited from oomph::QCrouzeixRaviartElement< DIM >
double dshape_and_dtest_eulerian_nst (const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
- Protected Member Functions inherited from oomph::NavierStokesEquations< DIM >
virtual void get_body_force_gradient_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, DenseMatrix< double > &d_body_force_dx)
 
virtual double get_source_nst (const double &time, const unsigned &ipt, const Vector< double > &x)
 
virtual void get_source_gradient_nst (const double &time, const unsigned &ipt, const Vector< double > &x, Vector< double > &gradient)
 
virtual void fill_in_generic_dresidual_contribution_nst (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam, unsigned flag)
 
void fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
- Protected Member Functions inherited from oomph::RefineableNavierStokesEquations< DIM >
virtual void pin_elemental_redundant_nodal_pressure_dofs ()
 
void fill_in_generic_residual_contribution_nst (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
 
void fill_in_generic_pressure_advection_diffusion_contribution_nst (Vector< double > &residuals, DenseMatrix< double > &jacobian, unsigned flag)
 
virtual void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
- Static Protected Member Functions inherited from oomph::RefineableElement
static void check_value_id (const int &n_continuously_interpolated_values, const int &value_id)
 
- Protected Attributes inherited from oomph::AdvectionDiffusionEquations< DIM >
doublePe_pt
 Pointer to global Peclet number. More...
 
doublePeSt_pt
 Pointer to global Peclet number multiplied by Strouhal number. More...
 
AdvectionDiffusionSourceFctPt Source_fct_pt
 Pointer to source function: More...
 
AdvectionDiffusionWindFctPt Wind_fct_pt
 Pointer to wind function: More...
 
bool ALE_is_disabled
 
- Protected Attributes inherited from oomph::FiniteElement
MacroElementMacro_elem_pt
 Pointer to the element's macro element (NULL by default) More...
 
- Protected Attributes inherited from oomph::GeomObject
unsigned NLagrangian
 Number of Lagrangian (intrinsic) coordinates. More...
 
unsigned Ndim
 Number of Eulerian coordinates. More...
 
TimeStepperGeom_object_time_stepper_pt
 
- Protected Attributes inherited from oomph::RefineableElement
TreeTree_pt
 A pointer to a general tree object. More...
 
unsigned Refine_level
 Refinement level. More...
 
bool To_be_refined
 Flag for refinement. More...
 
bool Refinement_is_enabled
 Flag to indicate suppression of any refinement. More...
 
bool Sons_to_be_unrefined
 Flag for unrefinement. More...
 
long Number
 Global element number – for plotting/validation purposes. More...
 
- Protected Attributes inherited from oomph::QCrouzeixRaviartElement< DIM >
unsigned P_nst_internal_index
 
- Protected Attributes inherited from oomph::NavierStokesEquations< DIM >
doubleViscosity_Ratio_pt
 
doubleDensity_Ratio_pt
 
doubleRe_pt
 Pointer to global Reynolds number. More...
 
doubleReSt_pt
 Pointer to global Reynolds number x Strouhal number (=Womersley) More...
 
doubleReInvFr_pt
 
Vector< double > * G_pt
 Pointer to global gravity Vector. More...
 
NavierStokesBodyForceFctPt Body_force_fct_pt
 Pointer to body force function. More...
 
NavierStokesSourceFctPt Source_fct_pt
 Pointer to volumetric source function. More...
 
NavierStokesPressureAdvDiffSourceFctPt Press_adv_diff_source_fct_pt
 
bool ALE_is_disabled
 
Vector< FpPressureAdvDiffRobinBCElementBase * > Pressure_advection_diffusion_robin_element_pt
 
int Pinned_fp_pressure_eqn
 
- Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned Default_Initial_Nvalue = 0
 Default value for the number of values at a node. More...
 
static const double Node_location_tolerance = 1.0e-14
 
static const unsigned N2deriv [] = {0, 1, 3, 6}
 
- Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< doubleDummy_matrix
 
static std::deque< double * > Dof_pt_deque
 
- Static Protected Attributes inherited from oomph::RefineableElement
static double Max_integrity_tolerance = 1.0e-8
 Max. allowed discrepancy in element integrity check. More...
 

Detailed Description

template<unsigned DIM>
class RefineableBuoyantQCrouzeixRaviartElement< DIM >

A RefineableElement class that solves the Boussinesq approximation of the Navier–Stokes and energy equations by coupling two pre-existing classes. The RefineableQAdvectionDiffusionElement with bi-quadratic interpolation for the scalar variable (temperature) and RefineableQCrouzeixRaviartElement which solves the Navier–Stokes equations using bi-quadratic interpolation for the velocities and a discontinuous bi-linear interpolation for the pressure. Note that we are free to choose the order in which we store the variables at the nodes. In this case we choose to store the variables in the order fluid velocities followed by temperature. We must, therefore, overload the function AdvectionDiffusionEquations<DIM>::u_index_adv_diff() to indicate that the temperature is stored at the DIM-th position not the 0-th. We do not need to overload the corresponding function in the NavierStokesEquations<DIM> class because the velocities are stored first. Finally, we choose to use the flux-recovery calculation from the fluid velocities to provide the error used in the mesh adaptation.

Constructor & Destructor Documentation

◆ RefineableBuoyantQCrouzeixRaviartElement()

Constructor: call the underlying constructors and initialise the pointer to the Rayleigh number to address the default value of 0.0

547  :
550  {
552  }
double * Ra_pt
Pointer to a new physical variable, the Rayleigh number.
Definition: 3d_ref_b_convect.cc:538
static double Default_Physical_Constant_Value
The static default value of the Rayleigh number.
Definition: 3d_ref_b_convect.cc:541
Refineable version of Crouzeix Raviart elements. Generic class definitions.
Definition: refineable_navier_stokes_elements.h:1109

References oomph::MultiDomainBoussinesqHelper::Default_Physical_Constant_Value.

Member Function Documentation

◆ compute_error() [1/2]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::compute_error ( ostream &  outfile,
FiniteElement::SteadyExactSolutionFctPt  exact_soln_pt,
double error,
double norm 
)
inline

Validate against exact solution. Solution is provided via function pointer. Plot at a given number of plot points and compute L2 error and L2 norm of velocity solution over element Overload to broken default.

893  compute_error(outfile,exact_soln_pt,error,norm);}
int error
Definition: calibrate.py:297
void compute_error(std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
Get error against and norm of exact solution.

References oomph::FiniteElement::compute_error(), and calibrate::error.

◆ compute_error() [2/2]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::compute_error ( ostream &  outfile,
FiniteElement::UnsteadyExactSolutionFctPt  exact_soln_pt,
const double time,
double error,
double norm 
)
inline

Validate against exact solution at given time Solution is provided via function pointer. Plot at a given number of plot points and compute L2 error and L2 norm of velocity solution over element Overload to broken default

881  {FiniteElement::compute_error(outfile,exact_soln_pt,
882  time,error,norm);}

References oomph::FiniteElement::compute_error(), and calibrate::error.

◆ Default_Physical_Constant_Value() [1/3]

◆ Default_Physical_Constant_Value() [2/3]

double RefineableBuoyantQCrouzeixRaviartElement< 2 >::Default_Physical_Constant_Value
private

Set the default value of the Rayleigh number to be zero.

◆ Default_Physical_Constant_Value() [3/3]

double RefineableBuoyantQCrouzeixRaviartElement< 3 >::Default_Physical_Constant_Value
private

◆ disable_ALE()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::disable_ALE ( )
inlinevirtual

Final override for disable ALE.

Reimplemented from oomph::FiniteElement.

570  {
571  //Disable ALE in both sets of equations
574  }
void disable_ALE()
Definition: gen_axisym_advection_diffusion_elements.h:144

References oomph::AdvectionDiffusionEquations< DIM >::disable_ALE(), and oomph::NavierStokesEquations< DIM >::disable_ALE().

◆ enable_ALE()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::enable_ALE ( )
inlinevirtual

Final override for enable ALE.

Reimplemented from oomph::FiniteElement.

578  {
579  //Enable ALE in both sets of equations
582  }
void enable_ALE()
Definition: gen_axisym_advection_diffusion_elements.h:154

References oomph::AdvectionDiffusionEquations< DIM >::enable_ALE(), and oomph::NavierStokesEquations< DIM >::enable_ALE().

◆ fill_in_contribution_to_jacobian()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::fill_in_contribution_to_jacobian ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inlinevirtual

Compute the element's residual Vector and the jacobian matrix using full finite differences, the default implementation

Reimplemented from oomph::GeneralisedElement.

944  {
945 #ifdef USE_FD_JACOBIAN_FOR_REFINEABLE_BUOYANT_Q_ELEMENT
947 #else
948  //Calculate the Navier-Stokes contributions (diagonal block and residuals)
950  fill_in_contribution_to_jacobian(residuals,jacobian);
951 
952  //Calculate the advection-diffusion contributions
953  //(diagonal block and residuals)
955  fill_in_contribution_to_jacobian(residuals,jacobian);
956 
957  //We now fill in the off-diagonal (interaction) blocks analytically
958  this->fill_in_off_diagonal_jacobian_blocks_analytic(residuals,jacobian);
959 #endif
960  } //End of jacobian calculation
void fill_in_off_diagonal_jacobian_blocks_analytic(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: 3d_ref_b_convect.cc:975
void fill_in_contribution_to_jacobian(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: gen_axisym_advection_diffusion_elements.h:536

References oomph::AdvectionDiffusionEquations< DIM >::fill_in_contribution_to_jacobian(), oomph::FiniteElement::fill_in_contribution_to_jacobian(), and oomph::NavierStokesEquations< DIM >::fill_in_contribution_to_jacobian().

◆ fill_in_contribution_to_jacobian_and_mass_matrix()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::fill_in_contribution_to_jacobian_and_mass_matrix ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian,
DenseMatrix< double > &  mass_matrix 
)
inlinevirtual

Add the element's contribution to its residuals vector, jacobian matrix and mass matrix

Reimplemented from oomph::GeneralisedElement.

967  {
968  //Call the (broken) version in the base class
970  residuals,jacobian,mass_matrix);
971  }
void fill_in_contribution_to_jacobian_and_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
Definition: gen_axisym_advection_diffusion_elements.h:547

References oomph::GeneralisedElement::fill_in_contribution_to_jacobian_and_mass_matrix().

◆ fill_in_contribution_to_residuals()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::fill_in_contribution_to_residuals ( Vector< double > &  residuals)
inlinevirtual

Fill in the constituent elements' contribution to the residual vector.

Reimplemented from oomph::GeneralisedElement.

929  {
930  //Call the residuals of the Navier-Stokes equations
932  residuals);
933 
934  //Call the residuals of the advection-diffusion equations
937  }
void fill_in_contribution_to_residuals(Vector< double > &residuals)
Add the element's contribution to its residual vector (wrapper)
Definition: gen_axisym_advection_diffusion_elements.h:522

References oomph::AdvectionDiffusionEquations< DIM >::fill_in_contribution_to_residuals(), and oomph::NavierStokesEquations< DIM >::fill_in_contribution_to_residuals().

◆ fill_in_off_diagonal_jacobian_blocks_analytic()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::fill_in_off_diagonal_jacobian_blocks_analytic ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inline

Compute the contribution of the off-diagonal blocks analytically.

977  {
978  //Perform another loop over the integration loops using the information
979  //from the original elements' residual assembly loops to determine
980  //the conributions to the jacobian
981 
982  // Local storage for pointers to hang_info objects
983  HangInfo *hang_info_pt=0, *hang_info2_pt=0;
984 
985  //Local storage for the index in the nodes at which the
986  //Navier-Stokes velocities are stored (we know that this should be 0,1,2)
987  unsigned u_nodal_nst[DIM];
988  for(unsigned i=0;i<DIM;i++) {u_nodal_nst[i] = this->u_index_nst(i);}
989 
990  //Local storage for the index at which the temperature is stored
991  const unsigned u_nodal_adv_diff = this->u_index_adv_diff();
992 
993  //Find out how many nodes there are
994  const unsigned n_node = this->nnode();
995 
996  //Set up memory for the shape and test functions and their derivatives
997  Shape psif(n_node), testf(n_node);
998  DShape dpsifdx(n_node,DIM), dtestfdx(n_node,DIM);
999 
1000  //Number of integration points
1001  const unsigned n_intpt = this->integral_pt()->nweight();
1002 
1003  //Get Physical Variables from Element
1004  double Ra = this->ra();
1005  double Pe = this->pe();
1006  Vector<double> gravity = this->g();
1007 
1008  //Integers to store the local equations and unknowns
1009  int local_eqn=0, local_unknown=0;
1010 
1011  //Loop over the integration points
1012  for(unsigned ipt=0;ipt<n_intpt;ipt++)
1013  {
1014  //Get the integral weight
1015  double w = this->integral_pt()->weight(ipt);
1016 
1017  //Call the derivatives of the shape and test functions
1018  double J =
1019  this->dshape_and_dtest_eulerian_at_knot_nst(ipt,psif,dpsifdx,
1020  testf,dtestfdx);
1021 
1022  //Premultiply the weights and the Jacobian
1023  double W = w*J;
1024 
1025  //Calculate local values of temperature derivatives
1026  //Allocate
1027  Vector<double> interpolated_du_adv_diff_dx(DIM,0.0);
1028 
1029  // Loop over nodes
1030  for(unsigned l=0;l<n_node;l++)
1031  {
1032  //Get the nodal value
1033  double u_value = this->nodal_value(l,u_nodal_adv_diff);
1034  //Loop over the derivative directions
1035  for(unsigned j=0;j<DIM;j++)
1036  {
1037  interpolated_du_adv_diff_dx[j] += u_value*dpsifdx(l,j);
1038  }
1039  }
1040 
1041  //Assemble the Jacobian terms
1042  //---------------------------
1043 
1044  //Loop over the test functions/eqns
1045  for(unsigned l=0;l<n_node;l++)
1046  {
1047  //Local variables to store the number of master nodes and
1048  //the weight associated with the shape function if the node is hanging
1049  unsigned n_master=1;
1050  double hang_weight=1.0;
1051 
1052  //Local bool (is the node hanging)
1053  bool is_node_hanging = this->node_pt(l)->is_hanging();
1054 
1055  //If the node is hanging, get the number of master nodes
1056  if(is_node_hanging)
1057  {
1058  hang_info_pt = this->node_pt(l)->hanging_pt();
1059  n_master = hang_info_pt->nmaster();
1060  }
1061  //Otherwise there is just one master node, the node itself
1062  else
1063  {
1064  n_master = 1;
1065  }
1066 
1067  //Loop over the master nodes
1068  for(unsigned m=0;m<n_master;m++)
1069  {
1070  //If the node is hanging get weight from master node
1071  if(is_node_hanging)
1072  {
1073  //Get the hang weight from the master node
1074  hang_weight = hang_info_pt->master_weight(m);
1075  }
1076  else
1077  {
1078  // Node contributes with full weight
1079  hang_weight = 1.0;
1080  }
1081 
1082 
1083  //Assemble derivatives of Navier Stokes momentum w.r.t. temperature
1084  //-----------------------------------------------------------------
1085 
1086  // Loop over velocity components for equations
1087  for(unsigned i=0;i<DIM;i++)
1088  {
1089 
1090  //Get the equation number
1091  if(is_node_hanging)
1092  {
1093  //Get the equation number from the master node
1094  local_eqn = this->local_hang_eqn(hang_info_pt->master_node_pt(m),
1095  u_nodal_nst[i]);
1096  }
1097  else
1098  {
1099  // Local equation number
1100  local_eqn = this->nodal_local_eqn(l,u_nodal_nst[i]);
1101  }
1102 
1103  if(local_eqn >= 0)
1104  {
1105  //Local variables to store the number of master nodes
1106  //and the weights associated with each hanging node
1107  unsigned n_master2=1;
1108  double hang_weight2=1.0;
1109 
1110  //Loop over the nodes for the unknowns
1111  for(unsigned l2=0;l2<n_node;l2++)
1112  {
1113  //Local bool (is the node hanging)
1114  bool is_node2_hanging = this->node_pt(l2)->is_hanging();
1115 
1116  //If the node is hanging, get the number of master nodes
1117  if(is_node2_hanging)
1118  {
1119  hang_info2_pt = this->node_pt(l2)->hanging_pt();
1120  n_master2 = hang_info2_pt->nmaster();
1121  }
1122  //Otherwise there is one master node, the node itself
1123  else
1124  {
1125  n_master2 = 1;
1126  }
1127 
1128  //Loop over the master nodes
1129  for(unsigned m2=0;m2<n_master2;m2++)
1130  {
1131  if(is_node2_hanging)
1132  {
1133  //Read out the local unknown from the master node
1134  local_unknown =
1135  this->local_hang_eqn(hang_info2_pt->master_node_pt(m2),
1136  u_nodal_adv_diff);
1137  //Read out the hanging weight from the master node
1138  hang_weight2 = hang_info2_pt->master_weight(m2);
1139  }
1140  else
1141  {
1142  //The local unknown number comes from the node
1143  local_unknown = this->nodal_local_eqn(l2,u_nodal_adv_diff);
1144  //The hang weight is one
1145  hang_weight2 = 1.0;
1146  }
1147 
1148  if(local_unknown >= 0)
1149  {
1150  //Add contribution to jacobian matrix
1151  jacobian(local_eqn,local_unknown)
1152  += -gravity[i]*psif(l2)*Ra*testf(l)*
1153  W*hang_weight*hang_weight2;
1154  }
1155  }
1156  }
1157  }
1158  }
1159 
1160 
1161  //Assemble derivative of adv diff eqn w.r.t. fluid veloc
1162  //------------------------------------------------------
1163  {
1164  //Get the equation number
1165  if(is_node_hanging)
1166  {
1167  //Get the equation number from the master node
1168  local_eqn = this->local_hang_eqn(hang_info_pt->master_node_pt(m),
1169  u_nodal_adv_diff);
1170  }
1171  else
1172  {
1173  // Local equation number
1174  local_eqn = this->nodal_local_eqn(l,u_nodal_adv_diff);
1175  }
1176 
1177  //If it's not pinned
1178  if(local_eqn >= 0)
1179  {
1180  //Local variables to store the number of master nodes
1181  //and the weights associated with each hanging node
1182  unsigned n_master2=1;
1183  double hang_weight2=1.0;
1184 
1185  //Loop over the nodes for the unknowns
1186  for(unsigned l2=0;l2<n_node;l2++)
1187  {
1188  //Local bool (is the node hanging)
1189  bool is_node2_hanging = this->node_pt(l2)->is_hanging();
1190 
1191  //If the node is hanging, get the number of master nodes
1192  if(is_node2_hanging)
1193  {
1194  hang_info2_pt = this->node_pt(l2)->hanging_pt();
1195  n_master2 = hang_info2_pt->nmaster();
1196  }
1197  //Otherwise there is one master node, the node itself
1198  else
1199  {
1200  n_master2 = 1;
1201  }
1202 
1203  //Loop over the master nodes
1204  for(unsigned m2=0;m2<n_master2;m2++)
1205  {
1206  //If the node is hanging
1207  if(is_node2_hanging)
1208  {
1209  //Read out the hanging weight from the master node
1210  hang_weight2 = hang_info2_pt->master_weight(m2);
1211  }
1212  //If the node is not hanging
1213  else
1214  {
1215  //The hang weight is one
1216  hang_weight2 = 1.0;
1217  }
1218 
1219  //Loop over the velocity degrees of freedom
1220  for(unsigned i2=0;i2<DIM;i2++)
1221  {
1222  //If the node is hanging
1223  if(is_node2_hanging)
1224  {
1225  //Read out the local unknown from the master node
1226  local_unknown =
1227  this->local_hang_eqn(hang_info2_pt->master_node_pt(m2),
1228  u_nodal_nst[i2]);
1229  }
1230  else
1231  {
1232  //The local unknown number comes from the node
1233  local_unknown=this->nodal_local_eqn(l2, u_nodal_nst[i2]);
1234  }
1235 
1236  //If it's not pinned
1237  if(local_unknown >= 0)
1238  {
1239  //Add the contribution to the jacobian matrix
1240  jacobian(local_eqn,local_unknown)
1241  -= Pe*psif(l2)*interpolated_du_adv_diff_dx[i2]*testf(l)
1242  *W*hang_weight*hang_weight2;
1243  }
1244  }
1245  }
1246  }
1247  }
1248  }
1249 
1250  }
1251  }
1252  }
1253  } //End of function
int i
Definition: BiCGSTAB_step_by_step.cpp:9
JacobiRotation< float > J
Definition: Jacobi_makeJacobi.cpp:3
RowVector3d w
Definition: Matrix_resize_int.cpp:3
MatrixType m2(n_dims)
unsigned u_index_adv_diff() const
Definition: 3d_ref_b_convect.cc:692
const double & ra() const
Access function for the Rayleigh number (const version)
Definition: 3d_ref_b_convect.cc:562
const double & pe() const
Peclet number.
Definition: advection_diffusion_elements.h:318
Definition: shape.h:278
Node *& node_pt(const unsigned &n)
Return a pointer to the local node n.
Definition: elements.h:2175
double nodal_value(const unsigned &n, const unsigned &i) const
Definition: elements.h:2593
int nodal_local_eqn(const unsigned &n, const unsigned &i) const
Definition: elements.h:1432
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2210
Integral *const & integral_pt() const
Return the pointer to the integration scheme (const version)
Definition: elements.h:1963
Definition: nodes.h:742
double const & master_weight(const unsigned &i) const
Return weight for dofs on i-th master node.
Definition: nodes.h:808
Node *const & master_node_pt(const unsigned &i) const
Return a pointer to the i-th master node.
Definition: nodes.h:791
unsigned nmaster() const
Return the number of master nodes.
Definition: nodes.h:785
virtual unsigned nweight() const =0
Return the number of integration points of the scheme.
virtual double weight(const unsigned &i) const =0
Return weight of i-th integration point.
virtual unsigned u_index_nst(const unsigned &i) const
Definition: navier_stokes_elements.h:866
const Vector< double > & g() const
Vector of gravitational components.
Definition: navier_stokes_elements.h:765
HangInfo *const & hanging_pt() const
Definition: nodes.h:1228
bool is_hanging() const
Test whether the node is geometrically hanging.
Definition: nodes.h:1285
double dshape_and_dtest_eulerian_at_knot_nst(const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
Definition: navier_stokes_elements.h:1981
int local_hang_eqn(Node *const &node_pt, const unsigned &i)
Definition: refineable_elements.h:278
Definition: shape.h:76
int * m
Definition: level2_cplx_impl.h:294
#define DIM
Definition: linearised_navier_stokes_elements.h:44
double Pe
Peclet number.
Definition: axisym_heat_sphere.cc:59
double Ra
Rayleigh number.
Definition: axisym_heat_sphere.cc:62
Definition: MortaringCantileverCompareToNonMortaring.cpp:176
@ W
Definition: quadtree.h:63
std::ptrdiff_t j
Definition: tut_arithmetic_redux_minmax.cpp:2

References DIM, i, J, j, m, m2(), oomph::HangInfo::master_node_pt(), oomph::HangInfo::master_weight(), oomph::HangInfo::nmaster(), Global_Parameters::Pe, oomph::pe(), Global_Parameters::Ra, w, and oomph::QuadTreeNames::W.

◆ further_build()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::further_build ( )
inlinevirtual

Call the underlying single-physics element's further_build() functions and make sure that the pointer to the Rayleigh number is passed to the sons

Reimplemented from oomph::RefineableElement.

794  {
797 
798  //Cast the pointer to the father element to the specific
799  //element type
800  RefineableBuoyantQCrouzeixRaviartElement<DIM>* cast_father_element_pt
802  this->father_element_pt());
803 
804  //Set the pointer to the Rayleigh number to be the same as that in
805  //the father
806  this->Ra_pt = cast_father_element_pt->ra_pt();
807  } //end of further build
Definition: boussinesq_elements.h:803
double *& ra_pt()
Access function for the pointer to the Rayleigh number.
Definition: boussinesq_elements.h:838
virtual RefineableElement * father_element_pt() const
Return a pointer to the father element.
Definition: refineable_elements.h:539

References oomph::RefineableAdvectionDiffusionEquations< DIM >::further_build(), oomph::RefineableQCrouzeixRaviartElement< DIM >::further_build(), and oomph::RefineableBuoyantQCrouzeixRaviartElement< DIM >::ra_pt().

◆ further_setup_hanging_nodes()

◆ get_body_force_nst()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_body_force_nst ( const double time,
const unsigned ipt,
const Vector< double > &  s,
const Vector< double > &  x,
Vector< double > &  result 
)
inlinevirtual

Overload the body force in the navier-stokes equations This provides the coupling from the advection-diffusion equations to the Navier–Stokes equations, the body force is the temperature multiplied by the Rayleigh number acting in the direction opposite to gravity.

Reimplemented from oomph::NavierStokesEquations< DIM >.

915  {
916  // Get vector that indicates the direction of gravity from
917  // the Navier-Stokes equations
919 
920  // Temperature-dependent body force:
921  for (unsigned i=0;i<DIM;i++)
922  {
923  result[i] = -gravity[i]*this->interpolated_u_adv_diff(s)*ra();
924  }
925  }
double interpolated_u_adv_diff(const Vector< double > &s) const
Return FE representation of function value u(s) at local coordinate s.
Definition: advection_diffusion_elements.h:458
Definition: navier_stokes_elements.h:395
void gravity(const double &t, const Vector< double > &xi, Vector< double > &b)
Definition: ConstraintElementsUnitTest.cpp:20

References DIM, Gravity::gravity(), i, and s.

◆ get_dof_numbers_for_unknowns()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_dof_numbers_for_unknowns ( std::list< std::pair< unsigned long, unsigned > > &  dof_lookup_list) const
inline

Create a list of pairs for all unknowns in this element, so that the first entry in each pair contains the global equation number of the unknown, while the second one contains the number of the DOF that this unknown is associated with. (Function can obviously only be called if the equation numbering scheme has been set up.)

1272  {
1273  // number of nodes
1274  unsigned n_node = this->nnode();
1275 
1276  // number of pressure values
1277  unsigned n_press = this->npres_nst();
1278 
1279  // temporary pair (used to store dof lookup prior to being added to list)
1280  std::pair<unsigned,unsigned> dof_lookup;
1281 
1282  // pressure dof number
1283  unsigned pressure_dof_number = DIM;
1284 
1285  // loop over the pressure values
1286  for (unsigned n = 0; n < n_press; n++)
1287  {
1288  // determine local eqn number
1289  int local_eqn_number = this->p_local_eqn(n);
1290 
1291  // ignore pinned values - far away degrees of freedom resulting
1292  // from hanging nodes can be ignored since these are be dealt
1293  // with by the element containing their master nodes
1294  if (local_eqn_number >= 0)
1295  {
1296  // store dof lookup in temporary pair: First entry in pair
1297  // is global equation number; second entry is dof type
1298  dof_lookup.first = this->eqn_number(local_eqn_number);
1299  dof_lookup.second = pressure_dof_number;
1300 
1301  // add to list
1302  dof_lookup_list.push_front(dof_lookup);
1303  }
1304  }
1305 
1306  // loop over the nodes
1307  for (unsigned n = 0; n < n_node; n++)
1308  {
1309  //loop over velocity dofs
1310  for (unsigned v = 0; v < DIM; v++)
1311  {
1312  // determine local eqn number
1313  int local_eqn_number = this->nodal_local_eqn(n, v);
1314 
1315  // ignore pinned values
1316  if (local_eqn_number >= 0)
1317  {
1318  // store dof lookup in temporary pair: First entry in pair
1319  // is global equation number; second entry is dof type
1320  dof_lookup.first = this->eqn_number(local_eqn_number);
1321  dof_lookup.second = v;
1322 
1323  // add to list
1324  dof_lookup_list.push_front(dof_lookup);
1325  }
1326  }
1327 
1328  // Temperature is stored at the end
1329  unsigned v=DIM;
1330  {
1331  // determine local eqn number
1332  int local_eqn_number = this->nodal_local_eqn(n, v);
1333 
1334  // ignore pinned values
1335  if (local_eqn_number >= 0)
1336  {
1337  // store dof lookup in temporary pair: First entry in pair
1338  // is global equation number; second entry is dof type
1339  dof_lookup.first = this->eqn_number(local_eqn_number);
1340 
1341  // Temperture is the last type
1342  dof_lookup.second = DIM+1;
1343 
1344  // add to list
1345  dof_lookup_list.push_front(dof_lookup);
1346 
1347  }
1348  }
1349  }
1350  }
Array< int, Dynamic, 1 > v
Definition: Array_initializer_list_vector_cxx11.cpp:1
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
unsigned long eqn_number(const unsigned &ieqn_local) const
Definition: elements.h:704
int local_eqn_number(const unsigned long &ieqn_global) const
Definition: elements.h:726
unsigned npres_nst() const
Return number of pressure values.
Definition: navier_stokes_elements.h:1830
int p_local_eqn(const unsigned &n) const
Return the local equation numbers for the pressure values.
Definition: navier_stokes_elements.h:1845

References DIM, n, and v.

◆ get_interpolated_values() [1/2]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_interpolated_values ( const unsigned t,
const Vector< double > &  s,
Vector< double > &  values 
)
inlinevirtual

Get all continuously interpolated values at the local coordinate s at time level t (t=0: present; t>0: previous). We choose to put the fluid velocities first, followed by the temperature

Implements oomph::RefineableElement.

745  {
746  //Storage for the fluid velocities
747  Vector<double> nst_values;
748 
749  //Get the fluid velocities from the fluid element
751  get_interpolated_values(t,s,nst_values);
752 
753  //Storage for the temperature
754  Vector<double> advection_values;
755 
756  //Get the temperature from the advection-diffusion element
758  get_interpolated_values(s,advection_values);
759 
760  //Add the fluid velocities to the values vector
761  for(unsigned i=0;i<DIM;i++) {values.push_back(nst_values[i]);}
762 
763  //Add the concentration to the end
764  values.push_back(advection_values[0]);
765 
766  } // end of get_interpolated_values
RealScalar s
Definition: level1_cplx_impl.h:130
t
Definition: plotPSD.py:36

References DIM, oomph::RefineableAdvectionDiffusionEquations< DIM >::get_interpolated_values(), oomph::RefineableQCrouzeixRaviartElement< DIM >::get_interpolated_values(), i, s, and plotPSD::t.

◆ get_interpolated_values() [2/2]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_interpolated_values ( const Vector< double > &  s,
Vector< double > &  values 
)
inlinevirtual

Get the continuously interpolated values at the local coordinate s. We choose to put the fluid velocities first, followed by the temperature.

Reimplemented from oomph::RefineableElement.

715  {
716  //Storage for the fluid velocities
717  Vector<double> nst_values;
718 
719  //Get the fluid velocities from the fluid element
721  get_interpolated_values(s,nst_values);
722 
723  //Storage for the temperature
724  Vector<double> advection_values;
725 
726  //Get the temperature from the advection-diffusion element
728  get_interpolated_values(s,advection_values);
729 
730  //Add the fluid velocities to the values vector
731  for(unsigned i=0;i<DIM;i++) {values.push_back(nst_values[i]);}
732 
733  //Add the concentration to the end
734  values.push_back(advection_values[0]);
735  }

References DIM, oomph::RefineableAdvectionDiffusionEquations< DIM >::get_interpolated_values(), oomph::RefineableQCrouzeixRaviartElement< DIM >::get_interpolated_values(), i, and s.

◆ get_wind_adv_diff()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_wind_adv_diff ( const unsigned ipt,
const Vector< double > &  s,
const Vector< double > &  x,
Vector< double > &  wind 
) const
inlinevirtual

Overload the wind function in the advection-diffusion equations. This provides the coupling from the Navier–Stokes equations to the advection-diffusion equations because the wind is the fluid velocity.

Reimplemented from oomph::AdvectionDiffusionEquations< DIM >.

901  {
902  //The wind function is simply the velocity at the points
903  this->interpolated_u_nst(s,wind);
904  }
void interpolated_u_nst(const Vector< double > &s, Vector< double > &veloc) const
Compute vector of FE interpolated velocity u at local coordinate s.
Definition: navier_stokes_elements.h:1505

References s.

◆ get_Z2_compound_flux_indices()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_Z2_compound_flux_indices ( Vector< unsigned > &  flux_index)
inlinevirtual

Fill in which flux components are associated with the fluid measure and which are associated with the temperature measure

Reimplemented from oomph::ElementWithZ2ErrorEstimator.

855  {
856  //Find the number of fluid fluxes
857  unsigned n_fluid_flux =
859  //Find the number of temperature fluxes
860  unsigned n_temp_flux =
862 
863  //The fluid fluxes are first
864  //The values of the flux_index vector are zero on entry, so we
865  //could omit this line
866  for(unsigned i=0;i<n_fluid_flux;i++) {flux_index[i] = 0;}
867  //Set the temperature fluxes (the last set of fluxes
868  for(unsigned i=0;i<n_temp_flux;i++) {flux_index[n_fluid_flux + i] = 1;}
869  }

References i, oomph::RefineableAdvectionDiffusionEquations< DIM >::num_Z2_flux_terms(), and oomph::RefineableNavierStokesEquations< DIM >::num_Z2_flux_terms().

◆ get_Z2_flux()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::get_Z2_flux ( const Vector< double > &  s,
Vector< double > &  flux 
)
inlinevirtual

Get the Z2 flux from the fluid element.

Implements oomph::ElementWithZ2ErrorEstimator.

831  {
832  //Find the number of fluid fluxes
833  unsigned n_fluid_flux =
835  //Fill in the first flux entries as the velocity entries
837 
838  //Find the number of temperature fluxes
839  unsigned n_temp_flux =
841  Vector<double> temp_flux(n_temp_flux);
842  //Get the temperature flux
844 
845  //Add the temperature flux to the end of the flux vector
846  for(unsigned i=0;i<n_temp_flux;i++)
847  {
848  flux[n_fluid_flux+i] = temp_flux[i];
849  }
850  } //end of get_Z2_flux
void flux(const double &time, const Vector< double > &x, double &flux)
Get flux applied along boundary x=0.
Definition: pretend_melt.cc:59
void get_Z2_flux(const Vector< double > &s, Vector< double > &flux)
Get 'flux' for Z2 error recovery.
Definition: overloaded_element_body.h:745

References ProblemParameters::flux(), oomph::RefineableAdvectionDiffusionEquations< DIM >::get_Z2_flux(), oomph::RefineableNavierStokesEquations< DIM >::get_Z2_flux(), i, oomph::RefineableAdvectionDiffusionEquations< DIM >::num_Z2_flux_terms(), oomph::RefineableNavierStokesEquations< DIM >::num_Z2_flux_terms(), and s.

◆ ncompound_fluxes()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::ncompound_fluxes ( )
inlinevirtual

The number of compound fluxes is two (one for the fluid and one for the temperature)

Reimplemented from oomph::ElementWithZ2ErrorEstimator.

817 {return 2;}

◆ ncont_interpolated_values()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::ncont_interpolated_values ( ) const
inlinevirtual

The total number of continously interpolated values is DIM+1 (DIM fluid velocities and one temperature).

Implements oomph::RefineableElement.

708  {return DIM+1;}

References DIM.

◆ ndof_types()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::ndof_types ( ) const
inlinevirtual

Perhaps this deserves a comment rather than three slashes? I did not write this function...

Reimplemented from oomph::GeneralisedElement.

1259  {
1260  return DIM+2;
1261  }

References DIM.

◆ nrecovery_order()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::nrecovery_order ( )
inlinevirtual

◆ nscalar_paraview()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::nscalar_paraview ( ) const
inlinevirtual

Number of scalars/fields output by this element. Broken virtual. Needs to be implemented for each new specific element type. Temporary dummy

Reimplemented from oomph::FiniteElement.

590  {
591  throw OomphLibError(
592  "This function hasn't been implemented for this element",
595 
596  // Dummy unsigned
597  return 0;
598  }
Definition: oomph_definitions.h:222
#define OOMPH_EXCEPTION_LOCATION
Definition: oomph_definitions.h:61
#define OOMPH_CURRENT_FUNCTION
Definition: oomph_definitions.h:86

References OOMPH_CURRENT_FUNCTION, and OOMPH_EXCEPTION_LOCATION.

◆ num_Z2_flux_terms()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::num_Z2_flux_terms ( )
inlinevirtual

The number of Z2 flux terms is the same as that in the fluid element plus that in the advection-diffusion element

Implements oomph::ElementWithZ2ErrorEstimator.

◆ nvertex_node()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::nvertex_node ( ) const
inlinevirtual

Number of vertex nodes in the element is obtained from the geometric element.

Implements oomph::ElementWithZ2ErrorEstimator.

Definition: Qelements.h:459

◆ output() [1/4]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::output ( FILE *  file_pt)
inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

666  {FiniteElement::output(file_pt);}
void output(std::ostream &outfile, const unsigned &nplot)
Overload output function.
Definition: overloaded_element_body.h:490

References oomph::FiniteElement::output().

◆ output() [2/4]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::output ( FILE *  file_pt,
const unsigned n_plot 
)
inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

670  {FiniteElement::output(file_pt,n_plot);}

References oomph::FiniteElement::output().

◆ output() [3/4]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::output ( ostream &  outfile)
inlinevirtual

Overload the standard output function with the broken default.

Reimplemented from oomph::FiniteElement.

624  {FiniteElement::output(outfile);}

References oomph::FiniteElement::output().

◆ output() [4/4]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::output ( ostream &  outfile,
const unsigned nplot 
)
inlinevirtual

Output function: x,y,u or x,y,z,u at Nplot^DIM plot points

Reimplemented from oomph::FiniteElement.

629  {
630  //vector of local coordinates
632 
633  // Tecplot header info
634  outfile << this->tecplot_zone_string(nplot);
635 
636  // Loop over plot points
637  unsigned num_plot_points=this->nplot_points(nplot);
638  for (unsigned iplot=0;iplot<num_plot_points;iplot++)
639  {
640  // Get local coordinates of plot point
641  this->get_s_plot(iplot,nplot,s);
642 
643  // Output the position of the plot point
644  for(unsigned i=0;i<DIM;i++)
645  {outfile << this->interpolated_x(s,i) << " ";}
646 
647  // Output the fluid velocities at the plot point
648  for(unsigned i=0;i<DIM;i++)
649  {outfile << this->interpolated_u_nst(s,i) << " ";}
650 
651  // Output the fluid pressure at the plot point
652  outfile << this->interpolated_p_nst(s) << " ";
653 
654  // Output the temperature at the plot point
655  outfile << this->interpolated_u_adv_diff(s) << " " << std::endl;
656  }
657  outfile << std::endl;
658 
659  // Write tecplot footer (e.g. FE connectivity lists)
660  this->write_tecplot_zone_footer(outfile,nplot);
661 
662  }
virtual std::string tecplot_zone_string(const unsigned &nplot) const
Definition: elements.h:3161
virtual double interpolated_x(const Vector< double > &s, const unsigned &i) const
Return FE interpolated coordinate x[i] at local coordinate s.
Definition: elements.cc:3962
virtual void get_s_plot(const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
Definition: elements.h:3148
virtual unsigned nplot_points(const unsigned &nplot) const
Definition: elements.h:3186
virtual void write_tecplot_zone_footer(std::ostream &outfile, const unsigned &nplot) const
Definition: elements.h:3174
virtual double interpolated_p_nst(const Vector< double > &s) const
Return FE interpolated pressure at local coordinate s.
Definition: navier_stokes_elements.h:1639

References DIM, i, and s.

◆ output_fct() [1/2]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::output_fct ( ostream &  outfile,
const unsigned Nplot,
const double time,
FiniteElement::UnsteadyExactSolutionFctPt  exact_soln_pt 
)
inline

Output function for a time-dependent exact solution. Broken default

685  {
687  output_fct(outfile,Nplot,time,exact_soln_pt);
688  }
void output_fct(std::ostream &outfile, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
Output exact soln: r,z,u_exact at nplot^2 plot points.

References oomph::FiniteElement::output_fct().

◆ output_fct() [2/2]

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::output_fct ( ostream &  outfile,
const unsigned Nplot,
FiniteElement::SteadyExactSolutionFctPt  exact_soln_pt 
)
inline

Output function for an exact solution: Broken default.

676  {FiniteElement::output_fct(outfile,Nplot,exact_soln_pt);}

References oomph::FiniteElement::output_fct().

◆ ra()

template<unsigned DIM>
const double& RefineableBuoyantQCrouzeixRaviartElement< DIM >::ra ( ) const
inline

Access function for the Rayleigh number (const version)

562 {return *Ra_pt;}

◆ ra_pt()

template<unsigned DIM>
double* & RefineableBuoyantQCrouzeixRaviartElement< DIM >::ra_pt ( )
inline

Access function for the pointer to the Rayleigh number.

565 {return Ra_pt;}

◆ rebuild_from_sons()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::rebuild_from_sons ( Mesh *&  mesh_pt)
inlinevirtual

◆ required_nvalue()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::required_nvalue ( const unsigned n) const
inlinevirtual

The required number of values stored at the nodes is the sum of the required values of the two single-physics elements. This step is generic for any composed element of this type.

Reimplemented from oomph::QCrouzeixRaviartElement< DIM >.

References n.

◆ scalar_name_paraview()

template<unsigned DIM>
std::string RefineableBuoyantQCrouzeixRaviartElement< DIM >::scalar_name_paraview ( const unsigned i) const
inlinevirtual

Name of the i-th scalar field. Default implementation returns V1 for the first one, V2 for the second etc. Can (should!) be overloaded with more meaningful names.

Reimplemented from oomph::FiniteElement.

618  {
619  return "V"+StringConversion::to_string(i);
620  }
std::string to_string(T object, unsigned float_precision=8)
Definition: oomph_utilities.h:189

References i, and oomph::StringConversion::to_string().

◆ scalar_value_paraview()

template<unsigned DIM>
void RefineableBuoyantQCrouzeixRaviartElement< DIM >::scalar_value_paraview ( std::ofstream &  file_out,
const unsigned i,
const unsigned nplot 
) const
inlinevirtual

Write values of the i-th scalar field at the plot points. Broken virtual. Needs to be implemented for each new specific element type. Temporary dummy

Reimplemented from oomph::FiniteElement.

606  {
607  throw OomphLibError(
608  "This function hasn't been implemented for this element",
611  }

References OOMPH_CURRENT_FUNCTION, and OOMPH_EXCEPTION_LOCATION.

◆ u_index_adv_diff()

template<unsigned DIM>
unsigned RefineableBuoyantQCrouzeixRaviartElement< DIM >::u_index_adv_diff ( ) const
inlinevirtual

Overload the index at which the temperature variable is stored. We choose to store is after the fluid velocities.

Reimplemented from oomph::AdvectionDiffusionEquations< DIM >.

693  {return DIM;}

References DIM.

◆ vertex_node_pt()

template<unsigned DIM>
Node* RefineableBuoyantQCrouzeixRaviartElement< DIM >::vertex_node_pt ( const unsigned j) const
inlinevirtual

Pointer to the j-th vertex node in the element, Call the geometric element's function.

Implements oomph::ElementWithZ2ErrorEstimator.

References j.

Member Data Documentation

◆ Default_Physical_Constant_Value

template<unsigned DIM>
double RefineableBuoyantQCrouzeixRaviartElement< DIM >::Default_Physical_Constant_Value
staticprivate

The static default value of the Rayleigh number.

◆ Ra_pt

template<unsigned DIM>
double* RefineableBuoyantQCrouzeixRaviartElement< DIM >::Ra_pt
private

Pointer to a new physical variable, the Rayleigh number.


The documentation for this class was generated from the following file: