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Variables | |
| parser = argparse.ArgumentParser() | |
| help | |
| default | |
| type | |
| action | |
| nargs | |
| args = parser.parse_args() | |
| onNode | |
| dataFiles = glob.glob('calibrate*.txt') | |
| list | materials = [dataFile.replace("calibrate", "").replace(".txt", "") for dataFile in dataFiles] |
| int | section = 0 |
| list | paramNames = [] |
| dictionary | paramRanges = {} |
| list | exeNames = [] |
| list | obsNames = [] |
| list | data = [] |
| list | weights = [] |
| material = args.material.split('_')[0] | |
| string | paramString = '-speciesType ' + material + ' ' |
| lines = paramFile.readlines() | |
| int | c = 0 |
| line = lines[c] | |
| val = line.split() | |
| string | par = paramString.split() |
| string | nextCompressiveStress = par.index("-normalStress") + 2 |
| string | buildDir = "../../." |
| string | dataFile = "%s/Exp/data.txt" % args.material |
| int | sigma = 1 |
| float | ess = 0.5 |
| int | numGaussians = 2 |
| samples | |
| float | priorWeight = 1.0 / numGaussians |
| list | analysis = [] |
| string | outputDir = "%s/Sim%d/" % (args.material, iteration) |
| string | smcTable = 'Tables/smcTable_%s_%i.txt' % (args.material, iteration) |
| smcTest | |
| gmm | |
| maxNumComponents | |
| caliStep | |
| iterNO | |
| posterior = smcTest.getPosterior() | |
| smcSamples = smcTest.getSmcSamples()[0] | |
| dpmData = smcTest.DPMData[-1] | |
| obsData = smcTest.obsData[-1] | |
| avgValues = smcTest.ips.T[0] | |
| covariances = smcTest.covs.T[0] | |
| bestId = np.argmax(posterior) | |
| bestValues = smcSamples[bestId] | |
| bestPosterior = posterior[bestId] | |
| bestData = dpmData[bestId] | |
| int | error = 0 |
| string | bestValuesStr = ', '.join(str(paramNames[i]) + ": " + str(bestValues[i]) for i in range(len(bestValues))) |
| string | bestDataStr = ', '.join("%s: %g (exp: %g)" % (obsNames[i], bestData[i], obsData[i]) for i in range(len(bestData))) |
| calibrate.action |
Referenced by main(), Eigen::internal.manage_caching_sizes(), and Eigen::internal.manage_multi_threading().
| list calibrate.analysis = [] |
| calibrate.args = parser.parse_args() |
| calibrate.avgValues = smcTest.ips.T[0] |
| string calibrate.bestDataStr = ', '.join("%s: %g (exp: %g)" % (obsNames[i], bestData[i], obsData[i]) for i in range(len(bestData))) |
| calibrate.bestId = np.argmax(posterior) |
| calibrate.bestValues = smcSamples[bestId] |
| string calibrate.bestValuesStr = ', '.join(str(paramNames[i]) + ": " + str(bestValues[i]) for i in range(len(bestValues))) |
| calibrate.buildDir = "../../." |
| int calibrate.c = 0 |
Referenced by __attribute__(), Eigen::FullPivLU< MatrixType_, PermutationIndex_ >._solve_impl(), Eigen::ColPivHouseholderQR< MatrixType_, PermutationIndex_ >._solve_impl(), Eigen::CompleteOrthogonalDecomposition< MatrixType_, PermutationIndex_ >._solve_impl(), Eigen::FullPivHouseholderQR< MatrixType_, PermutationIndex_ >._solve_impl(), Eigen::HouseholderQR< MatrixType_ >._solve_impl(), Eigen::FullPivLU< MatrixType_, PermutationIndex_ >._solve_impl_transposed(), Eigen::ColPivHouseholderQR< MatrixType_, PermutationIndex_ >._solve_impl_transposed(), Eigen::CompleteOrthogonalDecomposition< MatrixType_, PermutationIndex_ >._solve_impl_transposed(), Eigen::FullPivHouseholderQR< MatrixType_, PermutationIndex_ >._solve_impl_transposed(), Eigen::HouseholderQR< MatrixType_ >._solve_impl_transposed(), Eigen::internal::gebp_traits< LhsScalar_, RhsScalar_, ConjLhs_, ConjRhs_, Arch, PacketSize_ >.acc(), Eigen::internal::gebp_traits< std::complex< RealScalar >, RealScalar, ConjLhs_, false, Arch, PacketSize_ >.acc(), Eigen::internal::gebp_traits< RealScalar, std::complex< RealScalar >, false, ConjRhs_, Arch, PacketSize_ >.acc(), Eigen::internal::gebp_traits< std::complex< RealScalar >, std::complex< RealScalar >, ConjLhs_, ConjRhs_, Arch, PacketSize_ >.acc(), TwoByTwoMPIDomainMPI4Test.actionsAfterTimeStep(), oomph::Problem.adapt(), add_online_info_into_contributors_list(), VerticalMixerAngledBlades.addBlades(), ChuteWithHopper.addHopper(), VerticalMixerAngledBlades.addPrettyBlades(), adjoint(), adjoint_extra(), aliasing_with_resize(), alignedboxNonIntegralRotatable(), alignedboxRotatable(), alignedboxTranslatable(), AngledPeriodicBoundarySecondUnitTest.AngledPeriodicBoundarySecondUnitTest(), AngledPeriodicBoundaryUnitTest.AngledPeriodicBoundaryUnitTest(), Eigen::internal.apply_rotation_in_the_plane(), basicStuff(), bench(), bench_prod(), oomph::Problem.bifurcation_adapt_helper(), big_sparse_triplet(), Eigen::internal::bytewise_bitwise_helper< T >.binary(), BlockCompressionProblem< ELEMENT >.BlockCompressionProblem(), Eigen::internal.bruteforce_det3_helper(), bug_1281(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >.calc_lineage(), Eigen::internal::simpl_chol_helper< Scalar, StorageIndex >.calc_post(), oomph::HomogenisedLinearElasticityEquations< DIM >.calculate_effective_modulus(), GlobalParameters.calculate_strouhal_number(), call_ref(), rapidjson::MemoryPoolAllocator< BaseAllocator >.Capacity(), pcast_array< SrcPacket, TgtPacket, 4, 1 >.cast(), pcast_array< SrcPacket, TgtPacket, 8, 1 >.cast(), rapidjson::GenericReader< Encoding, Allocator >.characterOk(), rapidjson::Writer< Stream, Encoding, Allocator >.characterOk(), check_atan2(), check_left_top(), check_sparse_nonhermitian_solving(), check_sparse_spd_solving(), check_sparse_square_solving(), checkOptimalTraversal_impl(), cholesky(), cod(), Eigen::internal::block_xpr_helper< Block< XprType, BlockRows, BlockCols, InnerPanel > >.col(), Eigen::internal::block_xpr_helper< XprType >.col(), comparisons(), oomph::AdvectionDiffusionReactionEquations< NREAGENT, DIM >.compute_norm(), CGHandler.computeContactPoints(), Eigen::ComplexSchur< MatrixType_ >.computeShift(), oomph::OcTree.construct_rotation_matrix(), oomph::FaceElement.continuous_tangent_and_outer_unit_normal(), corners(), corners_fixedsize(), helpers.countLeadingDashes(), oomph::TrilinosEpetraHelpers.create_distributed_epetra_matrix_for_aztecoo(), SegregationWithHopper.create_inflow_particle(), AxisymmetricHopper.create_inflow_particle(), LevelSetWall.createVTKSphere(), cwise_ref(), Eigen::BDCSVD< MatrixType_, Options_ >.deflation43(), Eigen::BDCSVD< MatrixType_, Options_ >.deflation44(), internal::Colamd.detect_super_cols(), CantileverProblem< ELEMENT >.doc_solution(), EIGEN_DECLARE_TEST(), FancySpheres.FancySpheres(), Eigen::SparseVector< Scalar_, Options_, StorageIndex_ >.fill(), oomph::AxisymmetricLinearElasticityEquations.fill_in_generic_contribution_to_residuals_axisymmetric_linear_elasticity(), oomph::TimeHarmonicFourierDecomposedLinearElasticityEquations.fill_in_generic_contribution_to_residuals_fourier_decomp_time_harmonic_linear_elasticity(), oomph::HomogenisedLinearElasticityEquations< DIM >.fill_in_generic_contribution_to_residuals_linear_elasticity(), oomph::LinearElasticityEquations< DIM >.fill_in_generic_contribution_to_residuals_linear_elasticity(), oomph::RefineableLinearElasticityEquations< DIM >.fill_in_generic_contribution_to_residuals_linear_elasticity(), oomph::PMLTimeHarmonicLinearElasticityEquations< DIM >.fill_in_generic_contribution_to_residuals_time_harmonic_linear_elasticity(), oomph::RefineableTimeHarmonicLinearElasticityEquations< DIM >.fill_in_generic_contribution_to_residuals_time_harmonic_linear_elasticity(), oomph::TimeHarmonicLinearElasticityEquations< DIM >.fill_in_generic_contribution_to_residuals_time_harmonic_linear_elasticity(), oomph::AxisymmetricPoroelasticityEquations.fill_in_generic_residual_contribution(), Eigen::SparseVector< Scalar_, Options_, StorageIndex_ >.fillrand(), internal::Colamd.garbage_collection(), DPMBase.gatherContactStatistics(), gemm(), Eigen::internal.gemm_kern_avx512(), gemv_col(), gemv_row(), Eigen::internal.generic_ndtri_gt_exp_neg_two(), oomph::GeompackQuadScaffoldMesh.GeompackQuadScaffoldMesh(), get(), oomph::CRDoubleMatrix.get_matrix_transpose(), PolarNSProblem< ELEMENT >.get_symmetry(), oomph::StreamfunctionProblem.get_vels(), CGCoordinates::R.getCNormal(), CGCoordinates::RZ.getCNormal(), CGCoordinates::X.getCNormal(), CGCoordinates::XY.getCNormal(), CGCoordinates::XZ.getCNormal(), CGCoordinates::Y.getCNormal(), CGCoordinates::YZ.getCNormal(), CGCoordinates::Z.getCNormal(), Matrix3D.getCylindricalTensorField(), Vec3D.getCylindricalTensorField(), DPMBase.getElasticEnergy(), CGCoordinates::R.getINormal(), CGCoordinates::RZ.getINormal(), CGCoordinates::X.getINormal(), CGCoordinates::XY.getINormal(), CGCoordinates::XYZ.getINormal(), CGCoordinates::XZ.getINormal(), CGCoordinates::Y.getINormal(), CGCoordinates::YZ.getINormal(), CGCoordinates::Z.getINormal(), InteractionHandler.getInteraction(), ArcWall.getInteractionWith(), BaseWall.getInteractionWith(), Combtooth.getInteractionWith(), MeshTriangle.getInteractionWith(), SineWall.getInteractionWith(), TriangulatedWall.getInteractionWith(), VChute.getInteractionWith(), CGCoordinates::R.getPNormal(), CGCoordinates::RZ.getPNormal(), CGCoordinates::X.getPNormal(), CGCoordinates::XY.getPNormal(), CGCoordinates::XZ.getPNormal(), CGCoordinates::Y.getPNormal(), CGCoordinates::YZ.getPNormal(), CGCoordinates::Z.getPNormal(), CGCoordinates::RZ.getTangentialSquared(), CGCoordinates::XY.getTangentialSquared(), CGCoordinates::XYZ.getTangentialSquared(), CGCoordinates::XZ.getTangentialSquared(), CGCoordinates::YZ.getTangentialSquared(), TriangleMeshWall.getVolumeTetrahedron(), Eigen::internal.idrs(), internal::Colamd.init_scoring(), oomph::BlockPreconditioner< MATRIX >.internal_get_block(), oomph::BlockPreconditioner< MATRIX >.internal_get_block_ordered_preconditioner_vector(), oomph::BlockPreconditioner< MATRIX >.internal_get_block_vector(), oomph::BlockPreconditioner< MATRIX >.internal_get_block_vectors(), oomph::BlockPreconditioner< MATRIX >.internal_return_block_ordered_preconditioner_vector(), oomph::BlockPreconditioner< MATRIX >.internal_return_block_vector(), oomph::BlockPreconditioner< MATRIX >.internal_return_block_vectors(), jacobi(), linearStructure(), Eigen::internal::gebp_traits< LhsScalar_, RhsScalar_, ConjLhs_, ConjRhs_, Arch, PacketSize_ >.madd(), Eigen::internal::gebp_traits< std::complex< RealScalar >, RealScalar, ConjLhs_, false, Arch, PacketSize_ >.madd(), Eigen::internal::gebp_traits< RealScalar, std::complex< RealScalar >, false, ConjRhs_, Arch, PacketSize_ >.madd(), Eigen::internal::gebp_traits< std::complex< RealScalar >, std::complex< RealScalar >, ConjLhs_, ConjRhs_, Arch, PacketSize_ >.madd(), Eigen::internal::gebp_traits< std::complex< RealScalar >, RealScalar, ConjLhs_, false, Arch, PacketSize_ >.madd_impl(), Eigen::internal::gebp_traits< RealScalar, std::complex< RealScalar >, false, ConjRhs_, Arch, PacketSize_ >.madd_impl(), main(), Eigen::internal.make_packet4f(), Eigen::internal::kiss_cpx_fft< Scalar_ >.make_twiddles(), Eigen::DefaultDevice.memset(), Eigen::internal.minres(), miscMatrices(), msvc_workaround(), nomalloc(), objectivenessTest(), Eigen::internal::accurate_log2< float >.operator()(), Eigen::internal::gemm_pack_lhs< Scalar, Index, DataMapper, Pack1, Pack2, Packet, RowMajor, Conjugate, PanelMode >.operator()(), Eigen::internal.operator*(), operator-(), internal::Colamd.order_children(), rapidjson::GenericReader< Encoding, Allocator >.ParseHex4(), rapidjson::GenericReader< Encoding, Allocator >.ParseString(), Eigen::internal.pcast(), Eigen::internal.pcast< Packet2d, Packet16c >(), Eigen::internal.pcast< Packet2d, Packet16uc >(), Eigen::internal.pcast< Packet2d, Packet8s >(), Eigen::internal.pcast< Packet2d, Packet8us >(), Eigen::internal.pcast< Packet2f, Packet8c >(), Eigen::internal.pcast< Packet2f, Packet8uc >(), Eigen::internal.pcast< Packet2i, Packet8c >(), Eigen::internal.pcast< Packet2i, Packet8uc >(), Eigen::internal.pcast< Packet2l, Packet16c >(), Eigen::internal.pcast< Packet2l, Packet16uc >(), Eigen::internal.pcast< Packet2l, Packet8c >(), Eigen::internal.pcast< Packet2l, Packet8s >(), Eigen::internal.pcast< Packet2l, Packet8uc >(), Eigen::internal.pcast< Packet2l, Packet8us >(), Eigen::internal.pcast< Packet2ui, Packet8c >(), Eigen::internal.pcast< Packet2ui, Packet8uc >(), Eigen::internal.pcast< Packet2ul, Packet16c >(), Eigen::internal.pcast< Packet2ul, Packet16uc >(), Eigen::internal.pcast< Packet2ul, Packet8c >(), Eigen::internal.pcast< Packet2ul, Packet8s >(), Eigen::internal.pcast< Packet2ul, Packet8uc >(), Eigen::internal.pcast< Packet2ul, Packet8us >(), Eigen::internal.pcast< Packet4f, Packet16b >(), Eigen::internal.pcast< Packet4f, Packet16c >(), Eigen::internal.pcast< Packet4f, Packet16uc >(), Eigen::internal.pcast< Packet4i, Packet16c >(), Eigen::internal.pcast< Packet4i, Packet16uc >(), Eigen::internal.pcast< Packet4ui, Packet16c >(), Eigen::internal.pcast< Packet4ui, Packet16uc >(), Eigen::internal.pcmp_lt_or_nan(), Eigen::internal.permute_symm_to_fullsymm(), HopperInsertionBoundary.placeParticle(), Eigen::internal.pldexp< Packet4d >(), Eigen::internal.pldexp< Packet8d >(), Eigen::internal.pldexp_fast< Packet2d >(), Eigen::internal.pldexp_fast< Packet4d >(), Eigen::internal.pldexp_generic(), Eigen::internal.ploaddup< Packet16bf >(), Eigen::internal.ploaddup< Packet16h >(), Eigen::internal.ploaddup< Packet8h >(), Eigen::internal.ploadquad(), Eigen::internal.plset< Packet2f >(), Eigen::internal.plset< Packet2i >(), Eigen::internal.plset< Packet2ui >(), Eigen::internal.plset< Packet4s >(), Eigen::internal.plset< Packet4us >(), Eigen::internal.plset< Packet8c >(), Eigen::internal.plset< Packet8uc >(), Eigen::internal.plset< PacketXf >(), Eigen::internal.plset< PacketXi >(), Eigen::internal::conj_helper< LhsScalar, RhsScalar, true, true >.pmadd(), Eigen::internal::conj_helper< LhsType, RhsType, ConjLhs, ConjRhs >.pmadd(), Eigen::internal.pmadd(), Eigen::internal::conj_helper< Packet, Packet, ConjLhs, ConjRhs >.pmadd(), Eigen::internal::conj_helper< Packet, Packet, true, true >.pmadd(), Eigen::internal.pmadd< Packet1cd >(), Eigen::internal.pmadd< Packet2cf >(), pmadd_complex_complex(), pmadd_complex_real(), Eigen::internal.pmsub(), Eigen::internal.pnmadd(), Eigen::internal.pnmsub(), prod(), product(), product_extra(), product_large_regressions(), Eigen::internal.ptranspose(), rapidjson::GenericInsituStringStream< Encoding >.Put(), rapidjson::GenericStringBuffer< Encoding, Allocator >.Put(), rapidjson::FileStream.Put(), rapidjson::GenericWriteStream.Put(), rapidjson::GenericWriteStream.PutN(), rapidjson.PutN(), qr(), qr_fixedsize(), qr_kahan_matrix(), quatmul_default(), quatmul_novec(), rapidjson::FileStream.Read(), FileReader.read(), TriangleMeshWall.read(), REF_MADD(), REF_MSUB(), REF_NMADD(), REF_NMSUB(), oomph::RefineableSolidCubicMesh< ELEMENT >.RefineableSolidCubicMesh(), reverse(), rot(), Quaternion.rotateInverseInertiaTensor(), rotg(), Eigen::internal::visitor_impl< Visitor, Derived, Dynamic, false, false, ShortCircuitEvaluation >.run(), Eigen::internal::visitor_impl< Visitor, Derived, Dynamic, true, false, ShortCircuitEvaluation >.run(), Eigen::internal::sparse_time_dense_product_impl< SparseLhsType, DenseRhsType, DenseResType, AlphaType, ColMajor, true >.run(), Eigen::internal::sparse_time_dense_product_impl< SparseLhsType, DenseRhsType, DenseResType, typename DenseResType::Scalar, RowMajor, true >.run(), Eigen::internal::apply_rotation_in_the_plane_selector< Scalar, OtherScalar, SizeAtCompileTime, MinAlignment, Vectorizable >.run(), Eigen::internal::apply_rotation_in_the_plane_selector< Scalar, OtherScalar, SizeAtCompileTime, MinAlignment, true >.run(), Eigen::internal::igammac_cf_impl< Scalar, mode >.run(), Eigen::internal::igamma_series_impl< Scalar, mode >.run(), run_fixed_size_test(), run_test(), rvalue_move(), TriangleMeshWall.set(), set(), AngledPeriodicBoundary.set(), RefineableAdvectionDiffusionPipeProblem< ELEMENT >.set_initial_condition(), RefineableAdvectionDiffusionPipeProblem< ELEMENT >.set_inlet_concentration(), Slide.set_Walls(), CGFields::LiquidMigrationFields.setCylindricalFields(), CGFields::StandardFields.setCylindricalFields(), CGFields::LiquidMigrationFields.setFields(), CGFields::StandardFields.setFields(), Eigen::QuaternionBase< Derived >.setFromTwoVectors(), RNG.setLinearCongruentialGeneratorParmeters(), oomph::PseudoElasticFSIPreconditioner.setup(), VerticalMixer.setupInitialConditions(), HourGlass.setupInitialConditions(), Drum.setupInitialConditions(), Penetration.setupInitialConditions(), Silo.setupInitialConditions(), Tutorial11.setupInitialConditions(), AngledPeriodicBoundarySecondUnitTest.setupInitialConditions(), SimpleShearProblem< ELEMENT >.SimpleShearProblem(), rapidjson::MemoryPoolAllocator< BaseAllocator >.Size(), SmallMatrix< numberOfRows, numberOfColumns >.SmallMatrix(), solveQuad(), oomph::Problem.sparse_assemble_row_or_column_compressed_with_two_arrays(), sparse_basic(), sparse_block(), sparse_product(), WearableTriangulatedWall.storeDebris(), swapBytes(), syrk(), rapidjson::FileStream.Take(), test2dRotation(), test_array_misc(), test_array_zip_and_apply(), test_conversion(), test_id_helper(), test_imagenet_patches(), test_imagenet_patches_sycl(), Eigen.test_isCwiseApprox(), test_parallelize_gemm(), test_patch_no_extra_dim(), test_patch_no_extra_dim_sycl(), test_patch_padding_same(), test_patch_padding_same_sycl(), test_patch_padding_valid(), test_patch_padding_valid_same_value(), test_patch_padding_valid_same_value_sycl(), test_patch_padding_valid_sycl(), test_simple_image_patch_sycl(), test_simple_patch(), test_std_initializers_tensor(), test_stl_iterators(), EulerAngles< Scalar_ >.toRotationMatrix(), Eigen::AngleAxis< Scalar_ >.toRotationMatrix(), transformations_computed_scaling_continuity(), trsolve(), Eigen.umeyama(), Eigen::internal::bytewise_bitwise_helper< T >.unary(), upperbidiag(), vectorwiseop_array(), vectorwiseop_matrix(), oomph::OcTree.vertex_node_to_vector(), DPMBase.writeFstatHeader(), RestrictedWall.writeVTK(), WallVTKWriter.writeVTKCells(), VTKData.writeVTKDataFromVtkContainer(), and oomph::Problem.~Problem().
| calibrate.caliStep |
| calibrate.covariances = smcTest.covs.T[0] |
| list calibrate.data = [] |
| string calibrate.dataFile = "%s/Exp/data.txt" % args.material |
| calibrate.dataFiles = glob.glob('calibrate*.txt') |
Referenced by main().
| calibrate.default |
| calibrate.dpmData = smcTest.DPMData[-1] |
| calibrate.error = 0 |
Referenced by Eigen::PardisoImpl< Derived >._solve_impl(), oomph::Problem.adaptive_unsteady_newton_solve(), Eigen::PardisoImpl< Derived >.analyzePattern(), PIControllerBasic.apply(), PIController.apply(), oomph::Problem.arc_length_step_solve_helper(), oomph::FishMesh< ELEMENT >.build_mesh(), helpers.check(), oomph::Mesh.check_inverted_elements(), check_locate_zeta(), checkTemplate(), DarcyProblem< ELEMENT >.complete_problem_setup(), Eigen::PardisoImpl< Derived >.compute(), ModalPRefineableQPoissonElement< DIM >.compute_energy_error(), oomph::PRefineableQLinearElasticityElement< DIM >.compute_energy_error(), oomph::PRefineableQPoissonElement< DIM >.compute_energy_error(), AdvectionProblem.compute_error(), TwoDDGProblem< ELEMENT >.compute_error(), NonIsothermalAxisymmetricQCrouzeixRaviartElement.compute_error(), ModalPoissonEquations< DIM >.compute_error(), ModalPRefineableQPoissonElement< DIM >.compute_error(), RefineableBuoyantQCrouzeixRaviartElement< DIM >.compute_error(), RefineableQCrouzeixRaviartElementWithExternalElement< DIM >.compute_error(), RefineableQAdvectionDiffusionElementWithExternalElement< DIM >.compute_error(), QThermalPVDElement< DIM >.compute_error(), MyTaylorHoodElement.compute_error(), oomph::NavierStokesElementWithSingularity< BASIC_NAVIER_STOKES_ELEMENT >.compute_error(), oomph::MultiPoissonEquations< DIM, NFIELDS >.compute_error(), PoissonElementWithSingularity< BASIC_POISSON_ELEMENT >.compute_error(), Rotateable< ELEMENT >.compute_error(), oomph::AdvectionDiffusionEquations< DIM >.compute_error(), oomph::GeneralisedAdvectionDiffusionEquations< DIM >.compute_error(), oomph::AdvectionDiffusionReactionEquations< NREAGENT, DIM >.compute_error(), oomph::AxisymAdvectionDiffusionEquations.compute_error(), oomph::AxisymFoepplvonKarmanEquations.compute_error(), oomph::AxisymmetricLinearElasticityEquations.compute_error(), oomph::BiharmonicEquations< DIM >.compute_error(), oomph::BiharmonicElement< DIM >.compute_error(), oomph::DisplacementBasedFoepplvonKarmanEquations.compute_error(), oomph::FoepplvonKarmanEquations.compute_error(), oomph::FourierDecomposedHelmholtzEquations.compute_error(), oomph::HelmholtzEquations< DIM >.compute_error(), oomph::LinearElasticityEquations< DIM >.compute_error(), oomph::LinearWaveEquations< DIM >.compute_error(), oomph::PMLFourierDecomposedHelmholtzEquations.compute_error(), oomph::PMLHelmholtzEquations< DIM >.compute_error(), oomph::PMLTimeHarmonicLinearElasticityEquations< DIM >.compute_error(), oomph::PoissonEquations< DIM >.compute_error(), oomph::SpaceTimeUnsteadyHeatEquations< SPATIAL_DIM >.compute_error(), oomph::SpaceTimeUnsteadyHeatMixedOrderEquations< SPATIAL_DIM >.compute_error(), oomph::SphericalAdvectionDiffusionEquations.compute_error(), oomph::SteadyAxisymAdvectionDiffusionEquations.compute_error(), oomph::TimeHarmonicFourierDecomposedLinearElasticityEquations.compute_error(), oomph::UnsteadyHeatEquations< DIM >.compute_error(), oomph::WomersleyEquations< DIM >.compute_error(), oomph::YoungLaplaceEquations.compute_error(), oomph::AxisymmetricPoroelasticityEquations.compute_error(), oomph::DarcyEquations< DIM >.compute_error(), oomph::PoroelasticityEquations< DIM >.compute_error(), oomph::TLinearHeatAndElasticityElement< DIM, NNODE_1D >.compute_error(), oomph::RefineableBuoyantQAxisymCrouzeixRaviartElement.compute_error(), oomph::DoubleBuoyantQCrouzeixRaviartElement< DIM >.compute_error(), oomph::AxisymmetricQAdvectionCrouzeixRaviartElement.compute_error(), oomph::RefineableBuoyantQSphericalCrouzeixRaviartElement.compute_error(), oomph::RefineableDoubleBuoyantQCrouzeixRaviartElement< DIM >.compute_error(), oomph::AxisymmetricNavierStokesEquations.compute_error(), oomph::GeneralisedNewtonianAxisymmetricNavierStokesEquations.compute_error(), oomph::GeneralisedNewtonianNavierStokesEquations< DIM >.compute_error(), oomph::Mesh.compute_error(), oomph::BuoyantQCrouzeixRaviartElement< DIM >.compute_error(), oomph::RefineableBuoyantQCrouzeixRaviartElement< DIM >.compute_error(), oomph::NavierStokesEquations< DIM >.compute_error(), oomph::PolarNavierStokesEquations.compute_error(), oomph::SpaceTimeNavierStokesEquations< DIM >.compute_error(), oomph::SpaceTimeNavierStokesMixedOrderEquations< DIM >.compute_error(), oomph::SphericalNavierStokesEquations.compute_error(), oomph::EulerEquations< DIM >.compute_error(), oomph::ScalarAdvectionEquations< DIM >.compute_error(), oomph::PseudoSolidNodeUpdateElement< BASIC, SOLID >.compute_exact_Z2_error(), oomph::RefineablePseudoSolidNodeUpdateElement< BASIC, SOLID >.compute_exact_Z2_error(), oomph::RefineablePoissonEquations< DIM >.compute_exact_Z2_error(), oomph::TriangleMeshCurveSection.connect_final_vertex_to_curviline(), oomph::TriangleMeshCurveSection.connect_final_vertex_to_polyline(), oomph::TriangleMeshCurveSection.connect_initial_vertex_to_curviline(), oomph::TriangleMeshCurveSection.connect_initial_vertex_to_polyline(), oomph::AxisymmetricPoroelasticityTractionElement< ELEMENT >.contribution_to_total_porous_flux(), oomph::LinearisedAxisymPoroelasticBJS_FSIElement< FLUID_BULK_ELEMENT, POROELASTICITY_BULK_ELEMENT >.contribution_to_total_porous_flux(), oomph::OcTree.doc_face_neighbours(), oomph::BinaryTree.doc_neighbours(), oomph::QuadTree.doc_neighbours(), RefineableAdvectionDiffusionProblem< ELEMENT >.doc_solution(), ExtrudedMovingCylinderProblem< TWO_D_ELEMENT, THREE_D_ELEMENT >.doc_solution(), PMLStructuredCubicHelmholtz< ELEMENT >.doc_solution(), PMLHelmholtzMGProblem< ELEMENT >.doc_solution(), UnsteadyHeatProblem< ELEMENT >.doc_solution(), UnstructuredPoissonProblem< ELEMENT >.doc_solution(), RefineableUnsteadyHeatProblem< ELEMENT >.doc_solution(), AxiPoroProblem< ELEMENT, TIMESTEPPER >.doc_solution(), DarcyProblem< ELEMENT >.doc_solution(), OneDPoissonProblem< ELEMENT >.doc_solution(), TwoMeshFluxAdvectionDiffusionProblem< ELEMENT >.doc_solution(), AxisymmetricLinearElasticityProblem< ELEMENT, TIMESTEPPER >.doc_solution(), FourierDecomposedHelmholtzProblem< ELEMENT >.doc_solution(), StefanBoltzmannProblem< ELEMENT >.doc_solution(), ScatteringProblem< ELEMENT >.doc_solution(), PeriodicLoadProblem< ELEMENT >.doc_solution(), RefineablePeriodicLoadProblem< ELEMENT >.doc_solution(), PoissonProblem< ELEMENT >.doc_solution(), MultiPoissonProblem< ELEMENT >.doc_solution(), LinearWaveProblem< ELEMENT, TIMESTEPPER >.doc_solution(), RefineableTwoDPoissonProblem< ELEMENT >.doc_solution(), RefineableTwoMeshFluxPoissonProblem< ELEMENT >.doc_solution(), FluxPoissonMGProblem< ELEMENT, MESH >.doc_solution(), UnitCubePoissonMGProblem< ELEMENT, MESH >.doc_solution(), OscEllipseProblem< ELEMENT, TIMESTEPPER >.doc_solution(), RayleighProblem< ELEMENT, TIMESTEPPER >.doc_solution(), RayleighTractionProblem< ELEMENT, TIMESTEPPER >.doc_solution(), RefineablePoissonProblem< ELEMENT >.doc_solution(), PMLFourierDecomposedHelmholtzProblem< ELEMENT >.doc_solution(), ElasticAnnulusProblem< ELASTICITY_ELEMENT >.doc_solution(), EighthSpherePoissonProblem< ELEMENT >.doc_solution(), RefineableOneDPoissonProblem< ELEMENT >.doc_solution(), PRefineableOneDPoissonProblem< ELEMENT >.doc_solution(), TwoMeshFluxPoissonProblem< ELEMENT >.doc_solution(), TwoMeshFluxSteadyAxisymAdvectionDiffusionProblem< ELEMENT >.doc_solution(), FourierDecomposedTimeHarmonicLinearElasticityProblem< ELEMENT >.doc_solution(), oomph::BiharmonicProblem< DIM >.doc_solution(), oomph::BiharmonicFluidProblem< DIM >.doc_solution(), oomph::OcTree.doc_true_edge_neighbours(), oomph::NavierStokesSurfacePowerElement< ELEMENT >.drag_force(), oomph::ElementElementMortaringElement.evaluate_constraint_functions(), oomph::SarahBL.exact_soln(), SarahBL.exact_soln(), Eigen::PardisoImpl< Derived >.factorize(), oomph::ConstraintElement.fill_in_contribution_to_residuals(), oomph::LinearisedAxisymPoroelasticBJS_FSIElement< FLUID_BULK_ELEMENT, POROELASTICITY_BULK_ELEMENT >.fill_in_generic_residual_contribution_axisym_poroelastic_fsi(), oomph::SarahBL.full_exact_soln(), SarahBL.full_exact_soln(), oomph::FullCircleMesh< ELEMENT >.FullCircleMesh(), oomph::NavierStokesSurfaceDragTorqueElement< ELEMENT >.get_drag_and_torque(), oomph::Z2ErrorEstimator.get_element_errors(), oomph::NavierStokesSurfacePowerElement< ELEMENT >.get_kinetic_energy_flux(), oomph::NavierStokesSurfacePowerElement< ELEMENT >.get_rate_of_traction_work(), oomph::NavierStokesSurfacePowerElement< ELEMENT >.get_rate_of_traction_work_components(), oomph::FSILinearisedAxisymPoroelasticTractionElement< POROELASTICITY_BULK_ELEMENT, NAVIER_STOKES_BULK_ELEMENT >.get_traction(), oomph::NavierStokesImpedanceTractionElement< BULK_NAVIER_STOKES_ELEMENT, WOMERSLEY_ELEMENT, DIM >.get_volume_flux(), oomph::NavierStokesSurfacePowerElement< ELEMENT >.get_volume_flux(), AxisymmetricVibratingShellProblem< ELEMENT >.global_temporal_error_norm(), VibratingShellProblem< ELEMENT >.global_temporal_error_norm(), RefineableUnsteadyHeatProblem< ELEMENT >.global_temporal_error_norm(), InterfaceProblem< ELEMENT, TIMESTEPPER >.global_temporal_error_norm(), SurfactantProblem< ELEMENT, INTERFACE_ELEMENT >.global_temporal_error_norm(), UnsteadyHeatProblem< ELEMENT >.global_temporal_error_norm(), inverse_general_4x4(), oomph::FiniteElement.locate_zeta(), main(), Eigen::PardisoImpl< Derived >.manageErrorCode(), oomph::Problem.newton_solve(), oomph::DoubleMultiVector.operator()(), oomph::LinearisedAxisymPoroelasticBJS_FSIElement< FLUID_BULK_ELEMENT, POROELASTICITY_BULK_ELEMENT >.output(), oomph::ClampedHermiteShellBoundaryConditionElement.output(), oomph::MyProblem.output_ltes(), EulerProblem.parameter_study(), TwoDDGProblem< ELEMENT >.parameter_study(), AdvectionProblem.parameter_study(), oomph::SolidFiniteElement.position_local_eqn(), oomph::QExtrudedMacroElement< 3 >.QExtrudedMacroElement(), QFaceTestProblem< ELEMENT >.QFaceTestProblem(), oomph::QuarterTubeMesh< ELEMENT >.QuarterTubeMesh(), oomph::TreeBasedRefineableMeshBase.refine_as_in_reference_mesh(), Eigen::internal::pardiso_run_selector< IndexType >.run(), Eigen::internal::pardiso_run_selector< long long int >.run(), Eigen::internal::check_rows_cols_for_overflow< Dynamic, Dynamic, Dynamic >.run(), Eigen::internal::check_rows_cols_for_overflow< Dynamic, Dynamic, MaxColsAtCompileTime >.run(), Eigen::internal::check_rows_cols_for_overflow< Dynamic, MaxRowsAtCompileTime, Dynamic >.run(), run_fixed_size_test(), run_it(), NavierStokesProblem< ELEMENT >.run_natural_continuation(), run_test(), AxiPoroProblem< ELEMENT, TIMESTEPPER >.set_boundary_values(), set_error(), oomph::MyTaylorHoodElement< DIM >.set_error(), oomph::MyCrouzeixRaviartElement.set_error(), LinearWaveProblem< ELEMENT, TIMESTEPPER >.set_initial_condition(), AxisymmetricLinearElasticityProblem< ELEMENT, TIMESTEPPER >.set_initial_conditions(), oomph::TetMeshBase.setup_boundary_coordinates(), oomph::XdaTetMesh< ELEMENT >.setup_boundary_coordinates(), oomph::UnstructuredTwoDMeshGeometryBase.setup_boundary_coordinates(), oomph::TetMeshBase.snap_nodes_onto_geometric_objects(), oomph::TetMeshBase.snap_to_quadratic_surface(), SCoupling< M, O >.solveSurfaceCouplingForgiving(), SolidProblem< ELEMENT_TYPE >.solveUnsteadyForgiving(), oomph::Problem.steady_newton_solve(), oomph::SegregatableFSIProblem.steady_segregated_solve(), TFaceTestProblem< ELEMENT >.TFaceTestProblem(), TriangleFaceTestProblem< ELEMENT >.TriangleFaceTestProblem(), oomph::TriangleMeshClosedCurve.TriangleMeshClosedCurve(), oomph::TriangleMeshOpenCurve.TriangleMeshOpenCurve(), oomph::TriangleMeshPolygon.TriangleMeshPolygon(), oomph::TubeMesh< ELEMENT >.TubeMesh(), oomph::TreeBasedRefineableMeshBase.unrefine_uniformly(), oomph::Problem.unsteady_newton_solve(), and oomph::SegregatableFSIProblem.unsteady_segregated_solve().
| calibrate.ess = 0.5 |
Referenced by Eigen::RealSchur< MatrixType_ >.performFrancisQRStep().
| list calibrate.exeNames = [] |
| calibrate.gmm |
| calibrate.help |
| calibrate.iterNO |
Referenced by add_online_info_into_contributors_list(), PacketBlockSet< Scalar, StorageOrder, n >.comparePacketBlock(), contributor_name(), contributors_map_from_churn_output(), CFile.copy(), CFile.copy_data(), CFile.copy_fstat(), oomph::GmshTetScaffoldMesh.create_mesh_from_msh_file(), oomph::DebugHelpers.debug_string(), Eigen::internal.GetDenseElt(), Eigen.getMarketHeader(), Eigen::internal.GetMarketLine(), AreaVTK.getTotalsurfaceAreaFromFile(), inputfile_t.inputfile_t(), MercuryDataFile.isMercuryDataFile(), LaserOnLayer.LaserOnLayer(), LoadFinalOrient(), LoadInitOrient(), LoadIProfiles(), Eigen.loadMarket(), Eigen.loadMarketDense(), LoadPD(), LoadPebbles(), LoadTOI(), main(), helpers.more(), MercuryTimeStepIterator< NDIMS >.operator++(), print_cpuinfo(), FileReader.read(), csvReader.read(), BaseHandler< T >.read(), InteractionHandler.read(), DPMBase.read(), BaseCluster.read(), Chute.read(), MercuryBase.read(), BoundaryHandler.readAndAddObject(), SpeciesHandler.readAndAddObject(), WallHandler.readAndCreateObject(), WallHandler.readAndCreateOldObject(), DPMBase.readNextDataFile(), DPMBase.readNextFStatFile(), BoundaryHandler.readOldObject(), SpeciesHandler.readOldObject(), oomph::LineVisualiser.setup_from_file(), verify_impl(), CFile.writeP4C(), CFile.writeP4P(), CFile.writeP4W(), DataFiles.writeTimeStep(), and oomph::XdaTetMesh< ELEMENT >.XdaTetMesh().
| calibrate.lines = paramFile.readlines() |
| calibrate.material = args.material.split('_')[0] |
Referenced by Silo.setupInitialConditions().
| list calibrate.materials = [dataFile.replace("calibrate", "").replace(".txt", "") for dataFile in dataFiles] |
| calibrate.maxNumComponents |
| calibrate.nargs |
| string calibrate.nextCompressiveStress = par.index("-normalStress") + 2 |
| int calibrate.numGaussians = 2 |
| calibrate.obsData = smcTest.obsData[-1] |
| list calibrate.obsNames = [] |
| calibrate.onNode |
| string calibrate.outputDir = "%s/Sim%d/" % (args.material, iteration) |
| string calibrate.par = paramString.split() |
| list calibrate.paramNames = [] |
| dictionary calibrate.paramRanges = {} |
| string calibrate.paramString = '-speciesType ' + material + ' ' |
| calibrate.parser = argparse.ArgumentParser() |
| calibrate.posterior = smcTest.getPosterior() |
| float calibrate.priorWeight = 1.0 / numGaussians |
| calibrate.samples |
| int calibrate.section = 0 |
| int calibrate.sigma = 1 |
Referenced by Eigen::internal.bicgstabl(), oomph::Problem.bifurcation_adapt_helper(), oomph::ConstitutiveLaw.calculate_d_second_piola_kirchhoff_stress_dG(), oomph::AnisotropicHookean.calculate_second_piola_kirchhoff_stress(), oomph::GeneralisedHookean.calculate_second_piola_kirchhoff_stress(), oomph::IsotropicStrainEnergyFunctionConstitutiveLaw.calculate_second_piola_kirchhoff_stress(), Eigen::ArpackGeneralizedSelfAdjointEigenSolver< MatrixType, MatrixSolver, BisSPD >.compute(), CompressedSquareProblem< ELEMENT >.doc_solution(), CantileverProblem< ELEMENT >.doc_solution(), SimpleShearProblem< ELEMENT >.doc_solution(), oomph::ConstitutiveLaw.error_checking_in_input(), oomph::DisplacementBasedFoepplvonKarmanEquations.fill_in_contribution_to_residuals(), oomph::AxisymmetricPVDEquations.fill_in_contribution_to_residuals_axisym_pvd(), oomph::RefineableQDPVDElement< DIM, NNODE_1D >.fill_in_generic_contribution_to_residuals_pvd(), oomph::RefineablePVDEquations< DIM >.fill_in_generic_contribution_to_residuals_pvd(), oomph::PVDEquations< DIM >.fill_in_generic_contribution_to_residuals_pvd(), oomph::ScaleCoupledElement< ELEMENT >.fill_in_generic_contribution_to_residuals_pvd(), oomph::VolumeCoupledElement< ELEMENT >.fill_in_generic_contribution_to_residuals_pvd(), oomph::AxisymmetricPVDEquationsWithPressure.fill_in_generic_residual_contribution_axisym_pvd_with_pressure(), oomph::PerturbedSpineLinearisedAxisymmetricFluidInterfaceElement< ELEMENT >.fill_in_generic_residual_contribution_interface(), oomph::PointFluidInterfaceBoundingElement.fill_in_generic_residual_contribution_interface_boundary(), oomph::LineFluidInterfaceBoundingElement.fill_in_generic_residual_contribution_interface_boundary(), oomph::RefineablePVDEquationsWithPressure< DIM >.fill_in_generic_residual_contribution_pvd_with_pressure(), oomph::PVDEquationsWithPressure< DIM >.fill_in_generic_residual_contribution_pvd_with_pressure(), oomph::PVDEquationsWithPressure< DIM >.get_d_stress_dG_upper(), oomph::PVDEquations< DIM >.get_d_stress_dG_upper(), oomph::PVDEquationsBase< DIM >.get_energy(), oomph::SCoupledElement< ELEMENT >.get_momentum_and_energy(), oomph::VolumeCoupledElement< ELEMENT >.get_momentum_and_energy(), oomph::PVDEquationsBase< DIM >.get_principal_stress(), oomph::DisplacementBasedFoepplvonKarmanEquations.get_sigma(), oomph::AxisymmetricPVDEquations.get_stress(), oomph::AxisymmetricPVDEquationsWithPressure.get_stress(), oomph::PVDEquations< DIM >.get_stress(), oomph::PVDEquationsWithPressure< DIM >.get_stress(), oomph::DisplacementBasedFoepplvonKarmanEquations.get_stress_and_strain_for_output(), SolidProblem< ELEMENT_TYPE >.getMassMomentumEnergy(), Eigen::internal.idrstabl(), Eigen::internal.llt_rank_update_lower(), oomph::MySolidElement< ELEMENT >.output(), oomph::SpineAxisymmetricMarangoniSurfactantFluidInterfaceElement< ELEMENT >.output(), ElasticAxisymmetricSolubleSurfactantTransportInterfaceElement< ELEMENT >.output(), oomph::DisplacementBasedFoepplvonKarmanEquations.output(), Eigen::LDLT< MatrixType_, UpLo_ >.rankUpdate(), Eigen::LLT< MatrixType_, UpLo_ >.rankUpdate(), Eigen::internal::llt_inplace< Scalar, Lower >.rankUpdate(), Eigen::internal::llt_inplace< Scalar, Upper >.rankUpdate(), Eigen::internal::lapacke_helpers::lapacke_llt< Scalar, Mode >.rankUpdate(), Eigen::internal::lapacke_helpers::rank_update< Lower >.run(), Eigen::internal::lapacke_helpers::rank_update< Upper >.run(), Eigen::internal::arpack_wrapper< double, double >.seupd(), Eigen::internal::arpack_wrapper< float, float >.seupd(), svd_check_full(), test_chol_update(), Eigen.umeyama(), Eigen::internal::ldlt_inplace< Lower >.update(), Eigen::internal::ldlt_inplace< Upper >.update(), Eigen::internal::ldlt_inplace< Lower >.updateInPlace(), and SolidProblem< ELEMENT_TYPE >.writeToVTK().
| calibrate.smcSamples = smcTest.getSmcSamples()[0] |
| string calibrate.smcTable = 'Tables/smcTable_%s_%i.txt' % (args.material, iteration) |
| calibrate.smcTest |
| calibrate.type |
| calibrate.val = line.split() |
Referenced by oomph::VectorMatrix< VALUE_TYPE >.assign(), bug1105(), oomph::VectorMatrix< VALUE_TYPE >.build_vectors_and_value(), Eigen.BVMinimize(), check_hyperbolic_functions(), check_negate(), Eigen::internal.count_leading_zeros(), mathsFunc.cubic(), Eigen::ThreadPoolTempl< Environment >.DecodePartition(), Eigen::TensorSycl::internal::GeneralVectorTensor< OutScalar, OutAccessor, VectorMapper, TensorMapper, StorageIndex, Properties, KFactor, Vectorizable, is_lhs_vec, IsFinal >.extract_block(), Eigen::TensorSycl::internal::TensorContractionKernel< OutScalar, LhsScalar, RhsScalar, OutAccessor, LhsMapper, RhsMapper, StorageIndex, Properties, TripleDim, Vectorizable, input_mapper_properties, IsFinal, contraction_tp >.extract_block(), oomph::ODEProblem.get_error_norm(), oomph::BlockPreconditioner< MATRIX >.get_index_of_value(), ABCElement.get_non_external_dofs(), Eigen::internal::IndexTupleExtractor< N, T, O... >.get_val(), Eigen::internal::IndexTupleExtractor< 0, T, O... >.get_val(), Eigen::internal.GetDenseElt(), getMPISum(), AreaVTK.getTotalsurfaceAreaFromFile(), RefineableQAxisymAdvectionDiffusionBoussinesqElement.identify_all_field_data_for_external_interaction(), oomph::RefineableAdvectionDiffusionBoussinesqElement< AD_ELEMENT, NST_ELEMENT >.identify_all_field_data_for_external_interaction(), oomph::DenseMatrix< T >.initialise(), oomph::RankThreeTensor< T >.initialise(), oomph::RankFourTensor< T >.initialise(), oomph::RankFiveTensor< T >.initialise(), Eigen::DenseBase< Derived >.isConstant(), helpers.linspace(), LoadIProfiles(), LoadPD(), LoadPebbles(), LoadTOI(), main(), Eigen::internal.minimize_helper(), DPMBase.mpiIsInCommunicationZone(), MyTaylorHoodElement(), Eigen::MakeComplex< false >.operator()(), Eigen::PartOf< RealPart >.operator()(), Eigen::PartOf< ImagPart >.operator()(), Eigen::MakeComplex< NeedUprade >.operator()(), Eigen::MakeComplex< true >.operator()(), Eigen::PartOf< ResultType >.operator()(), Eigen::internal::FixedInt< N >.operator()(), Eigen::symbolic::SymbolExpr< tag >.operator=(), OffByOneScalar< T >.operator=(), packetmath_real(), Eigen::internal.ploaddup< Packet4c >(), Eigen::internal.ploaddup< Packet4s >(), Eigen::internal.ploaddup< Packet4uc >(), Eigen::internal.ploaddup< Packet4us >(), Eigen::internal.ploadquad< Packet8c >(), Eigen::internal.ploadquad< Packet8uc >(), Eigen.poly_eval(), Eigen.poly_eval_horner(), TestQueue.Pop(), Eigen::SparseVector< Scalar_, Options_, StorageIndex_ >.prune(), Eigen::internal.psincos_double(), Eigen::internal.psincos_float(), TestQueue.Push(), HorizontalScrew.read(), helpers.readArrayFromFile(), UserReducer.reduce(), ref_clz(), ref_ctz(), oomph::VectorMatrix< VALUE_TYPE >.resize(), Eigen::internal::void_helper.restore(), check_signbit_impl< T >.run(), typed_logicals_test_impl< ArrayType >.run(), Eigen::internal::maybe_raise_div_by_zero< Packet, true >.run(), Eigen::internal::eigen_fill_impl< Xpr, false >.run(), Eigen::internal::eigen_fill_impl< Xpr, true >.run(), run_eigen(), Eigen::PolynomialSolverBase< Scalar_, Deg_ >.selectRealRoot_withRespectToRealPart(), Eigen::type2indexpair< f, s >.set(), Eigen::type2index< n >.set(), Eigen::IndexPair< Idx >.set(), Eigen::internal::IndexTupleExtractor< N, T, O... >.set_val(), Eigen::internal::IndexTupleExtractor< 0, T, O... >.set_val(), BaseCG.setAverageBeyondDomain(), Vec3D.setComponent(), Eigen::TensorBase< Derived, AccessLevel >.setConstant(), Eigen::DenseBase< Derived >.setConstant(), Eigen::PlainObjectBase< Derived >.setConstant(), SCoupling< M, O >.setSolidFeelsParticles(), Eigen::ThreadPoolTempl< Environment >.SetStealPartition(), Eigen::ThreadPoolTempl< Environment >.SetStealPartitions(), mathsFunc.sign(), sparse_basic(), sparse_vector(), mathsFunc.square(), test_3d(), test_array(), test_casting(), test_clz_ctz(), test_clz_ctz_random(), test_constants(), test_custom_binary_op(), test_custom_binary_op_sycl(), test_from_tensor(), test_functors(), test_minmax_nan_propagation_templ(), helpers.toString(), Eigen::internal.update_value(), Eigen::internal::VariableAndFixedInt< N >.VariableAndFixedInt(), oomph::VectorMatrix< VALUE_TYPE >.VectorMatrix(), Eigen::MapBase< Derived, WriteAccessors >.writePacket(), Eigen::internal::BlockImpl_dense< XprType, BlockRows, BlockCols, InnerPanel, HasDirectAccess >.writePacket(), and Eigen::PlainObjectBase< Derived >.writePacket().
| list calibrate.weights = [] |
Referenced by NurbsUtils.evaluate(), WearableNurbsWall.getVolumeUnderSurface(), WearableNurbsWall.getVolumeUnderSurfaceX(), MeshTriangle.isInsideTriangle(), main(), Eigen::internal.matrix_log_compute_pade(), NurbsSurface.NurbsSurface(), NurbsSurface.set(), WearableNurbsWall.set(), Nurbs.setupInitialConditions(), and NurbsWall.writeWallDetailsVTK().
1.9.1