RayleighProblem< ELEMENT, TIMESTEPPER > Class Template Reference
+ Inheritance diagram for RayleighProblem< ELEMENT, TIMESTEPPER >:

Public Member Functions

 RayleighProblem (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly)
 Problem constructor. More...
 
void actions_before_newton_solve ()
 
void actions_after_newton_solve ()
 Update after solve is empty. More...
 
void actions_before_implicit_timestep ()
 
void unsteady_run (DocInfo &doc_info)
 Run an unsteady simulation. More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution. More...
 
void set_initial_condition ()
 
 RayleighProblem (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const bool &use_ale)
 Problem constructor. More...
 
RefineableQuarterCircleSectorMesh< ELEMENT > * mesh_pt ()
 Cast to specific mesh. More...
 
void actions_before_newton_solve ()
 
void actions_after_newton_solve ()
 Update after solve is empty. More...
 
void actions_before_implicit_timestep ()
 
void unsteady_run (DocInfo &doc_info)
 Run an unsteady simulation. More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution. More...
 
void set_initial_condition ()
 
void actions_after_adapt ()
 After adaptation: Unpin pressure and pin redudant pressure dofs. More...
 
void possibly_disable_ALE ()
 Switch off ALE terms. More...
 
 RayleighProblem (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const bool &use_ale)
 
void actions_before_newton_solve ()
 
void actions_after_newton_solve ()
 Update after solve is empty. More...
 
void actions_before_implicit_timestep ()
 
void unsteady_run (DocInfo &doc_info)
 Run an unsteady simulation. More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution. More...
 
void set_initial_condition ()
 
- Public Member Functions inherited from oomph::Problem
virtual void debug_hook_fct (const unsigned &i)
 
void set_analytic_dparameter (double *const &parameter_pt)
 
void unset_analytic_dparameter (double *const &parameter_pt)
 
bool is_dparameter_calculated_analytically (double *const &parameter_pt)
 
void set_analytic_hessian_products ()
 
void unset_analytic_hessian_products ()
 
bool are_hessian_products_calculated_analytically ()
 
void set_pinned_values_to_zero ()
 
bool distributed () const
 
virtual void actions_before_adapt ()
 
OomphCommunicatorcommunicator_pt ()
 access function to the oomph-lib communicator More...
 
const OomphCommunicatorcommunicator_pt () const
 access function to the oomph-lib communicator, const version More...
 
 Problem ()
 
 Problem (const Problem &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const Problem &)=delete
 Broken assignment operator. More...
 
virtual ~Problem ()
 Virtual destructor to clean up memory. More...
 
Mesh *& mesh_pt ()
 Return a pointer to the global mesh. More...
 
Mesh *const & mesh_pt () const
 Return a pointer to the global mesh (const version) More...
 
Mesh *& mesh_pt (const unsigned &imesh)
 
Mesh *const & mesh_pt (const unsigned &imesh) const
 Return a pointer to the i-th submesh (const version) More...
 
unsigned nsub_mesh () const
 Return number of submeshes. More...
 
unsigned add_sub_mesh (Mesh *const &mesh_pt)
 
void flush_sub_meshes ()
 
void build_global_mesh ()
 
void rebuild_global_mesh ()
 
LinearSolver *& linear_solver_pt ()
 Return a pointer to the linear solver object. More...
 
LinearSolver *const & linear_solver_pt () const
 Return a pointer to the linear solver object (const version) More...
 
LinearSolver *& mass_matrix_solver_for_explicit_timestepper_pt ()
 
LinearSolvermass_matrix_solver_for_explicit_timestepper_pt () const
 
EigenSolver *& eigen_solver_pt ()
 Return a pointer to the eigen solver object. More...
 
EigenSolver *const & eigen_solver_pt () const
 Return a pointer to the eigen solver object (const version) More...
 
Time *& time_pt ()
 Return a pointer to the global time object. More...
 
Timetime_pt () const
 Return a pointer to the global time object (const version). More...
 
doubletime ()
 Return the current value of continuous time. More...
 
double time () const
 Return the current value of continuous time (const version) More...
 
TimeStepper *& time_stepper_pt ()
 
const TimeSteppertime_stepper_pt () const
 
TimeStepper *& time_stepper_pt (const unsigned &i)
 Return a pointer to the i-th timestepper. More...
 
ExplicitTimeStepper *& explicit_time_stepper_pt ()
 Return a pointer to the explicit timestepper. More...
 
unsigned long set_timestepper_for_all_data (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data=false)
 
virtual void shift_time_values ()
 Shift all values along to prepare for next timestep. More...
 
AssemblyHandler *& assembly_handler_pt ()
 Return a pointer to the assembly handler object. More...
 
AssemblyHandler *const & assembly_handler_pt () const
 Return a pointer to the assembly handler object (const version) More...
 
doubleminimum_dt ()
 Access function to min timestep in adaptive timestepping. More...
 
doublemaximum_dt ()
 Access function to max timestep in adaptive timestepping. More...
 
unsignedmax_newton_iterations ()
 Access function to max Newton iterations before giving up. More...
 
void problem_is_nonlinear (const bool &prob_lin)
 Access function to Problem_is_nonlinear. More...
 
doublemax_residuals ()
 
booltime_adaptive_newton_crash_on_solve_fail ()
 Access function for Time_adaptive_newton_crash_on_solve_fail. More...
 
doublenewton_solver_tolerance ()
 
void add_time_stepper_pt (TimeStepper *const &time_stepper_pt)
 
void set_explicit_time_stepper_pt (ExplicitTimeStepper *const &explicit_time_stepper_pt)
 
void initialise_dt (const double &dt)
 
void initialise_dt (const Vector< double > &dt)
 
Data *& global_data_pt (const unsigned &i)
 Return a pointer to the the i-th global data object. More...
 
void add_global_data (Data *const &global_data_pt)
 
void flush_global_data ()
 
LinearAlgebraDistribution *const & dof_distribution_pt () const
 Return the pointer to the dof distribution (read-only) More...
 
unsigned long ndof () const
 Return the number of dofs. More...
 
unsigned ntime_stepper () const
 Return the number of time steppers. More...
 
unsigned nglobal_data () const
 Return the number of global data values. More...
 
unsigned self_test ()
 Self-test: Check meshes and global data. Return 0 for OK. More...
 
void enable_store_local_dof_pt_in_elements ()
 
void disable_store_local_dof_pt_in_elements ()
 
unsigned long assign_eqn_numbers (const bool &assign_local_eqn_numbers=true)
 
void describe_dofs (std::ostream &out= *(oomph_info.stream_pt())) const
 
void enable_discontinuous_formulation ()
 
void disable_discontinuous_formulation ()
 
void get_dofs (DoubleVector &dofs) const
 
void get_dofs (const unsigned &t, DoubleVector &dofs) const
 Return vector of the t'th history value of all dofs. More...
 
void set_dofs (const DoubleVector &dofs)
 Set the values of the dofs. More...
 
void set_dofs (const unsigned &t, DoubleVector &dofs)
 Set the history values of the dofs. More...
 
void set_dofs (const unsigned &t, Vector< double * > &dof_pt)
 
void add_to_dofs (const double &lambda, const DoubleVector &increment_dofs)
 Add lambda x incremenet_dofs[l] to the l-th dof. More...
 
doubleglobal_dof_pt (const unsigned &i)
 
doubledof (const unsigned &i)
 i-th dof in the problem More...
 
double dof (const unsigned &i) const
 i-th dof in the problem (const version) More...
 
double *& dof_pt (const unsigned &i)
 Pointer to i-th dof in the problem. More...
 
doubledof_pt (const unsigned &i) const
 Pointer to i-th dof in the problem (const version) More...
 
virtual void get_inverse_mass_matrix_times_residuals (DoubleVector &Mres)
 
virtual void get_dvaluesdt (DoubleVector &f)
 
virtual void get_residuals (DoubleVector &residuals)
 Get the total residuals Vector for the problem. More...
 
virtual void get_jacobian (DoubleVector &residuals, DenseDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, CRDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, CCDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, SumOfMatrices &jacobian)
 
void get_fd_jacobian (DoubleVector &residuals, DenseMatrix< double > &jacobian)
 Get the full Jacobian by finite differencing. More...
 
void get_derivative_wrt_global_parameter (double *const &parameter_pt, DoubleVector &result)
 
void get_hessian_vector_products (DoubleVectorWithHaloEntries const &Y, Vector< DoubleVectorWithHaloEntries > const &C, Vector< DoubleVectorWithHaloEntries > &product)
 
void solve_eigenproblem (const unsigned &n_eval, Vector< std::complex< double >> &eigenvalue, Vector< DoubleVector > &eigenvector, const bool &steady=true)
 Solve the eigenproblem. More...
 
void solve_eigenproblem (const unsigned &n_eval, Vector< std::complex< double >> &eigenvalue, const bool &steady=true)
 
virtual void get_eigenproblem_matrices (CRDoubleMatrix &mass_matrix, CRDoubleMatrix &main_matrix, const double &shift=0.0)
 
void assign_eigenvector_to_dofs (DoubleVector &eigenvector)
 Assign the eigenvector passed to the function to the dofs. More...
 
void add_eigenvector_to_dofs (const double &epsilon, const DoubleVector &eigenvector)
 
void store_current_dof_values ()
 Store the current values of the degrees of freedom. More...
 
void restore_dof_values ()
 Restore the stored values of the degrees of freedom. More...
 
void enable_jacobian_reuse ()
 
void disable_jacobian_reuse ()
 Disable recycling of Jacobian in Newton iteration. More...
 
bool jacobian_reuse_is_enabled ()
 Is recycling of Jacobian in Newton iteration enabled? More...
 
booluse_predictor_values_as_initial_guess ()
 
void newton_solve ()
 Use Newton method to solve the problem. More...
 
void enable_globally_convergent_newton_method ()
 enable globally convergent Newton method More...
 
void disable_globally_convergent_newton_method ()
 disable globally convergent Newton method More...
 
void newton_solve (unsigned const &max_adapt)
 
void steady_newton_solve (unsigned const &max_adapt=0)
 
void copy (Problem *orig_problem_pt)
 
virtual Problemmake_copy ()
 
virtual void read (std::ifstream &restart_file, bool &unsteady_restart)
 
virtual void read (std::ifstream &restart_file)
 
virtual void dump (std::ofstream &dump_file) const
 
void dump (const std::string &dump_file_name) const
 
void delete_all_external_storage ()
 
virtual void symmetrise_eigenfunction_for_adaptive_pitchfork_tracking ()
 
doublebifurcation_parameter_pt () const
 
void get_bifurcation_eigenfunction (Vector< DoubleVector > &eigenfunction)
 
void activate_fold_tracking (double *const &parameter_pt, const bool &block_solve=true)
 
void activate_bifurcation_tracking (double *const &parameter_pt, const DoubleVector &eigenvector, const bool &block_solve=true)
 
void activate_bifurcation_tracking (double *const &parameter_pt, const DoubleVector &eigenvector, const DoubleVector &normalisation, const bool &block_solve=true)
 
void activate_pitchfork_tracking (double *const &parameter_pt, const DoubleVector &symmetry_vector, const bool &block_solve=true)
 
void activate_hopf_tracking (double *const &parameter_pt, const bool &block_solve=true)
 
void activate_hopf_tracking (double *const &parameter_pt, const double &omega, const DoubleVector &null_real, const DoubleVector &null_imag, const bool &block_solve=true)
 
void deactivate_bifurcation_tracking ()
 
void reset_assembly_handler_to_default ()
 Reset the system to the standard non-augemented state. More...
 
double arc_length_step_solve (double *const &parameter_pt, const double &ds, const unsigned &max_adapt=0)
 
double arc_length_step_solve (Data *const &data_pt, const unsigned &data_index, const double &ds, const unsigned &max_adapt=0)
 
void reset_arc_length_parameters ()
 
intsign_of_jacobian ()
 
void explicit_timestep (const double &dt, const bool &shift_values=true)
 Take an explicit timestep of size dt. More...
 
void unsteady_newton_solve (const double &dt)
 
void unsteady_newton_solve (const double &dt, const bool &shift_values)
 
void unsteady_newton_solve (const double &dt, const unsigned &max_adapt, const bool &first, const bool &shift=true)
 
double doubly_adaptive_unsteady_newton_solve (const double &dt, const double &epsilon, const unsigned &max_adapt, const bool &first, const bool &shift=true)
 
double doubly_adaptive_unsteady_newton_solve (const double &dt, const double &epsilon, const unsigned &max_adapt, const unsigned &suppress_resolve_after_spatial_adapt_flag, const bool &first, const bool &shift=true)
 
double adaptive_unsteady_newton_solve (const double &dt_desired, const double &epsilon)
 
double adaptive_unsteady_newton_solve (const double &dt_desired, const double &epsilon, const bool &shift_values)
 
void assign_initial_values_impulsive ()
 
void assign_initial_values_impulsive (const double &dt)
 
void calculate_predictions ()
 Calculate predictions. More...
 
void enable_mass_matrix_reuse ()
 
void disable_mass_matrix_reuse ()
 
bool mass_matrix_reuse_is_enabled ()
 Return whether the mass matrix is being reused. More...
 
void refine_uniformly (const Vector< unsigned > &nrefine_for_mesh)
 
void refine_uniformly (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh)
 
void refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void refine_uniformly (DocInfo &doc_info)
 
void refine_uniformly_and_prune (DocInfo &doc_info)
 
void refine_uniformly ()
 
void refine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform refinement for submesh i_mesh with documentation. More...
 
void refine_uniformly (const unsigned &i_mesh)
 Do uniform refinement for submesh i_mesh without documentation. More...
 
void p_refine_uniformly (const Vector< unsigned > &nrefine_for_mesh)
 
void p_refine_uniformly (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void p_refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh)
 
void p_refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void p_refine_uniformly (DocInfo &doc_info)
 
void p_refine_uniformly_and_prune (DocInfo &doc_info)
 
void p_refine_uniformly ()
 
void p_refine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform p-refinement for submesh i_mesh with documentation. More...
 
void p_refine_uniformly (const unsigned &i_mesh)
 Do uniform p-refinement for submesh i_mesh without documentation. More...
 
void refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
void refine_selected_elements (const Vector< RefineableElement * > &elements_to_be_refined_pt)
 
void refine_selected_elements (const unsigned &i_mesh, const Vector< unsigned > &elements_to_be_refined)
 
void refine_selected_elements (const unsigned &i_mesh, const Vector< RefineableElement * > &elements_to_be_refined_pt)
 
void refine_selected_elements (const Vector< Vector< unsigned >> &elements_to_be_refined)
 
void refine_selected_elements (const Vector< Vector< RefineableElement * >> &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const unsigned &i_mesh, const Vector< unsigned > &elements_to_be_refined)
 
void p_refine_selected_elements (const unsigned &i_mesh, const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const Vector< Vector< unsigned >> &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< Vector< PRefineableElement * >> &elements_to_be_refined_pt)
 
unsigned unrefine_uniformly ()
 
unsigned unrefine_uniformly (const unsigned &i_mesh)
 
void p_unrefine_uniformly (DocInfo &doc_info)
 
void p_unrefine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform p-unrefinement for submesh i_mesh without documentation. More...
 
void adapt (unsigned &n_refined, unsigned &n_unrefined)
 
void adapt ()
 
void p_adapt (unsigned &n_refined, unsigned &n_unrefined)
 
void p_adapt ()
 
void adapt_based_on_error_estimates (unsigned &n_refined, unsigned &n_unrefined, Vector< Vector< double >> &elemental_error)
 
void adapt_based_on_error_estimates (Vector< Vector< double >> &elemental_error)
 
void get_all_error_estimates (Vector< Vector< double >> &elemental_error)
 
void doc_errors (DocInfo &doc_info)
 Get max and min error for all elements in submeshes. More...
 
void doc_errors ()
 Get max and min error for all elements in submeshes. More...
 
void enable_info_in_newton_solve ()
 
void disable_info_in_newton_solve ()
 Disable the output of information when in the newton solver. More...
 
- Public Member Functions inherited from oomph::ExplicitTimeSteppableObject
 ExplicitTimeSteppableObject ()
 Empty constructor. More...
 
 ExplicitTimeSteppableObject (const ExplicitTimeSteppableObject &)=delete
 Broken copy constructor. More...
 
void operator= (const ExplicitTimeSteppableObject &)=delete
 Broken assignment operator. More...
 
virtual ~ExplicitTimeSteppableObject ()
 Empty destructor. More...
 
virtual void actions_before_explicit_stage ()
 
virtual void actions_after_explicit_stage ()
 

Private Member Functions

void fix_pressure (const unsigned &e, const unsigned &pdof, const double &pvalue)
 Fix pressure in element e at pressure dof pdof and set to pvalue. More...
 
void fix_pressure (const unsigned &e, const unsigned &pdof, const double &pvalue)
 Fix pressure in element e at pressure dof pdof and set to pvalue. More...
 
void fix_pressure (const unsigned &e, const unsigned &pdof, const double &pvalue)
 Fix pressure in element e at pressure dof pdof and set to pvalue. More...
 

Private Attributes

ofstream Trace_file
 Trace file. More...
 
bool Use_ALE
 Trace file. More...
 

Additional Inherited Members

- Public Types inherited from oomph::Problem
typedef void(* SpatialErrorEstimatorFctPt) (Mesh *&mesh_pt, Vector< double > &elemental_error)
 Function pointer for spatial error estimator. More...
 
typedef void(* SpatialErrorEstimatorWithDocFctPt) (Mesh *&mesh_pt, Vector< double > &elemental_error, DocInfo &doc_info)
 Function pointer for spatial error estimator with doc. More...
 
- Public Attributes inherited from oomph::Problem
bool Shut_up_in_newton_solve
 
- Static Public Attributes inherited from oomph::Problem
static bool Suppress_warning_about_actions_before_read_unstructured_meshes
 
- Protected Types inherited from oomph::Problem
enum  Assembly_method {
  Perform_assembly_using_vectors_of_pairs , Perform_assembly_using_two_vectors , Perform_assembly_using_maps , Perform_assembly_using_lists ,
  Perform_assembly_using_two_arrays
}
 Enumerated flags to determine which sparse assembly method is used. More...
 
- Protected Member Functions inherited from oomph::Problem
unsigned setup_element_count_per_dof ()
 
virtual void sparse_assemble_row_or_column_compressed (Vector< int * > &column_or_row_index, Vector< int * > &row_or_column_start, Vector< double * > &value, Vector< unsigned > &nnz, Vector< double * > &residual, bool compressed_row_flag)
 
virtual void actions_before_newton_convergence_check ()
 
virtual void actions_before_newton_step ()
 
virtual void actions_after_newton_step ()
 
virtual void actions_after_implicit_timestep ()
 
virtual void actions_after_implicit_timestep_and_error_estimation ()
 
virtual void actions_before_explicit_timestep ()
 Actions that should be performed before each explicit time step. More...
 
virtual void actions_after_explicit_timestep ()
 Actions that should be performed after each explicit time step. More...
 
virtual void actions_before_read_unstructured_meshes ()
 
virtual void actions_after_read_unstructured_meshes ()
 
virtual void actions_after_change_in_global_parameter (double *const &parameter_pt)
 
virtual void actions_after_change_in_bifurcation_parameter ()
 
virtual void actions_after_parameter_increase (double *const &parameter_pt)
 
doubledof_derivative (const unsigned &i)
 
doubledof_current (const unsigned &i)
 
virtual double global_temporal_error_norm ()
 
unsigned newton_solve_continuation (double *const &parameter_pt)
 
unsigned newton_solve_continuation (double *const &parameter_pt, DoubleVector &z)
 
void calculate_continuation_derivatives (double *const &parameter_pt)
 
void calculate_continuation_derivatives (const DoubleVector &z)
 
void calculate_continuation_derivatives_fd (double *const &parameter_pt)
 
bool does_pointer_correspond_to_problem_data (double *const &parameter_pt)
 
void set_consistent_pinned_values_for_continuation ()
 
- Protected Attributes inherited from oomph::Problem
Vector< Problem * > Copy_of_problem_pt
 
std::map< double *, boolCalculate_dparameter_analytic
 
bool Calculate_hessian_products_analytic
 
LinearAlgebraDistributionDof_distribution_pt
 
Vector< double * > Dof_pt
 Vector of pointers to dofs. More...
 
DoubleVectorWithHaloEntries Element_count_per_dof
 
double Relaxation_factor
 
double Newton_solver_tolerance
 
unsigned Max_newton_iterations
 Maximum number of Newton iterations. More...
 
unsigned Nnewton_iter_taken
 
Vector< doubleMax_res
 Maximum residuals at start and after each newton iteration. More...
 
double Max_residuals
 
bool Time_adaptive_newton_crash_on_solve_fail
 
bool Jacobian_reuse_is_enabled
 Is re-use of Jacobian in Newton iteration enabled? Default: false. More...
 
bool Jacobian_has_been_computed
 
bool Problem_is_nonlinear
 
bool Pause_at_end_of_sparse_assembly
 
bool Doc_time_in_distribute
 
unsigned Sparse_assembly_method
 
unsigned Sparse_assemble_with_arrays_initial_allocation
 
unsigned Sparse_assemble_with_arrays_allocation_increment
 
Vector< Vector< unsigned > > Sparse_assemble_with_arrays_previous_allocation
 
double Numerical_zero_for_sparse_assembly
 
double FD_step_used_in_get_hessian_vector_products
 
bool Mass_matrix_reuse_is_enabled
 
bool Mass_matrix_has_been_computed
 
bool Discontinuous_element_formulation
 
double Minimum_dt
 Minimum desired dt: if dt falls below this value, exit. More...
 
double Maximum_dt
 Maximum desired dt. More...
 
double DTSF_max_increase
 
double DTSF_min_decrease
 
double Minimum_dt_but_still_proceed
 
bool Scale_arc_length
 Boolean to control whether arc-length should be scaled. More...
 
double Desired_proportion_of_arc_length
 Proportion of the arc-length to taken by the parameter. More...
 
double Theta_squared
 
int Sign_of_jacobian
 Storage for the sign of the global Jacobian. More...
 
double Continuation_direction
 
double Parameter_derivative
 Storage for the derivative of the global parameter wrt arc-length. More...
 
double Parameter_current
 Storage for the present value of the global parameter. More...
 
bool Use_continuation_timestepper
 Boolean to control original or new storage of dof stuff. More...
 
unsigned Dof_derivative_offset
 
unsigned Dof_current_offset
 
Vector< doubleDof_derivative
 Storage for the derivative of the problem variables wrt arc-length. More...
 
Vector< doubleDof_current
 Storage for the present values of the variables. More...
 
double Ds_current
 Storage for the current step value. More...
 
unsigned Desired_newton_iterations_ds
 
double Minimum_ds
 Minimum desired value of arc-length. More...
 
bool Bifurcation_detection
 Boolean to control bifurcation detection via determinant of Jacobian. More...
 
bool Bisect_to_find_bifurcation
 Boolean to control wheter bisection is used to located bifurcation. More...
 
bool First_jacobian_sign_change
 Boolean to indicate whether a sign change has occured in the Jacobian. More...
 
bool Arc_length_step_taken
 Boolean to indicate whether an arc-length step has been taken. More...
 
bool Use_finite_differences_for_continuation_derivatives
 
OomphCommunicatorCommunicator_pt
 The communicator for this problem. More...
 
bool Always_take_one_newton_step
 
double Timestep_reduction_factor_after_nonconvergence
 
bool Keep_temporal_error_below_tolerance
 
- Static Protected Attributes inherited from oomph::Problem
static ContinuationStorageScheme Continuation_time_stepper
 Storage for the single static continuation timestorage object. More...
 

Detailed Description

template<class ELEMENT, class TIMESTEPPER>
class RayleighProblem< ELEMENT, TIMESTEPPER >

Rayleigh-type problem: 2D channel whose upper wall oscillates periodically.

Constructor & Destructor Documentation

◆ RayleighProblem() [1/3]

template<class ELEMENT , class TIMESTEPPER >
RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem ( const unsigned nx,
const unsigned ny,
const double lx,
const double ly 
)

Problem constructor.

Constructor: Pass number of elements in x and y directions and lengths

190 {
191  //Allocate the timestepper
192  add_time_stepper_pt(new TIMESTEPPER);
193 
194  //Now create the mesh with periodic boundary conditions in x direction
195  bool periodic_in_x=true;
196  Problem::mesh_pt() =
197  new RectangularQuadMesh<ELEMENT>(nx,ny,lx,ly,periodic_in_x,
198  time_stepper_pt());
199 
200  // Set the boundary conditions for this problem: All nodes are
201  // free by default -- just pin the ones that have Dirichlet conditions
202  // here
203  unsigned num_bound=mesh_pt()->nboundary();
204  for(unsigned ibound=0;ibound<num_bound;ibound++)
205  {
206  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
207  for (unsigned inod=0;inod<num_nod;inod++)
208  {
209  // No slip on top and bottom
210  if ((ibound==0)||(ibound==2))
211  {
212  mesh_pt()->boundary_node_pt(ibound,inod)->pin(0);
213  mesh_pt()->boundary_node_pt(ibound,inod)->pin(1);
214  }
215  // Horizontal outflow on the left (and right -- right bc not
216  // strictly necessary because of symmetry)
217  else if ((ibound==1)||(ibound==3))
218  {
219  mesh_pt()->boundary_node_pt(ibound,inod)->pin(1);
220  }
221  }
222  } // end loop over boundaries
223 
224  //Complete the problem setup to make the elements fully functional
225 
226  //Loop over the elements
227  unsigned n_el = mesh_pt()->nelement();
228  for(unsigned e=0;e<n_el;e++)
229  {
230  //Cast to a fluid element
231  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e));
232 
233  //Set the Reynolds number, etc
234  el_pt->re_pt() = &Global_Parameters::Re;
235  el_pt->re_st_pt() = &Global_Parameters::ReSt;
236  }
237 
238  // Now pin the pressure in first element at value 0 to 0.0
239  fix_pressure(0,0,0.0);
240 
241  //Assgn equation numbers
242  cout << assign_eqn_numbers() << std::endl;
243 } // end of constructor
Array< double, 1, 3 > e(1./3., 0.5, 2.)
RefineableQuarterCircleSectorMesh< ELEMENT > * mesh_pt()
Cast to specific mesh.
Definition: ray_circ_cavity_adapt.cc:139
void fix_pressure(const unsigned &e, const unsigned &pdof, const double &pvalue)
Fix pressure in element e at pressure dof pdof and set to pvalue.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:169
void add_time_stepper_pt(TimeStepper *const &time_stepper_pt)
Definition: problem.cc:1545
unsigned long assign_eqn_numbers(const bool &assign_local_eqn_numbers=true)
Definition: problem.cc:1989
TimeStepper *& time_stepper_pt()
Definition: problem.h:1524
Definition: rectangular_quadmesh.template.h:59
double ReSt
Womersley number: Product of Reynolds and Strouhal numbers.
Definition: fsi_channel_with_leaflet_precond.cc:225
double Re
reynolds number
Definition: adaptive_hopf.cc:54
const double ly
Definition: ConstraintElementsUnitTest.cpp:34
const double lx
Definition: ConstraintElementsUnitTest.cpp:33
const unsigned nx
Definition: ConstraintElementsUnitTest.cpp:30
const unsigned ny
Definition: ConstraintElementsUnitTest.cpp:31

References e(), Mesh_Parameters::lx, Mesh_Parameters::ly, Mesh_Parameters::nx, Mesh_Parameters::ny, Global_Parameters::Re, and Global_Parameters::ReSt.

◆ RayleighProblem() [2/3]

template<class ELEMENT , class TIMESTEPPER >
RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem ( const unsigned nx,
const unsigned ny,
const double lx,
const double ly,
const bool use_ale 
)

Problem constructor.

Constructor: Pass number of elements in x and y directions and lengths and ALE flag

262  : Use_ALE(use_ale)
263 {
264  //Allocate the timestepper
265  add_time_stepper_pt(new TIMESTEPPER);
266 
267  // Build geometric object that parametrises the curved boundary
268  // of the domain
269 
270  // Half axes for ellipse
271  double a_ellipse=1.0;
272  double b_ellipse=1.0;
273 
274  // Setup elliptical ring
275  GeomObject* Wall_pt=new MyEllipse(a_ellipse,b_ellipse);
276 
277  // End points for wall
278  double xi_lo=0.0;
279  double xi_hi=2.0*atan(1.0);
280 
281  //Now create the mesh
282  double fract_mid=0.5;
283  Problem::mesh_pt() = new
285  Wall_pt,xi_lo,fract_mid,xi_hi,time_stepper_pt());
286 
287  // Set error estimator
290  mesh_pt())->spatial_error_estimator_pt()=error_estimator_pt;
291 
292 
293  mesh_pt()->refine_uniformly();
294  mesh_pt()->refine_uniformly();
295 
296  //Now create the mesh with periodic boundary conditions in x direction
297  //bool periodic_in_x=true;
298  //Problem::mesh_pt() =
299  //new RectangularQuadMesh<ELEMENT>(nx,ny,lx,ly,periodic_in_x,
300  // time_stepper_pt());
301 
302  // Set the boundary conditions for this problem: All nodes are
303  // free by default -- just pin the ones that have Dirichlet conditions
304  // here
305  unsigned num_bound=mesh_pt()->nboundary();
306  for(unsigned ibound=0;ibound<num_bound;ibound++)
307  {
308  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
309  for (unsigned inod=0;inod<num_nod;inod++)
310  {
311  mesh_pt()->boundary_node_pt(ibound,inod)->pin(0);
312  mesh_pt()->boundary_node_pt(ibound,inod)->pin(1);
313  }
314  } // end loop over boundaries
315 
316 
317  //Complete the problem setup to make the elements fully functional
318 
319  //Loop over the elements
320  unsigned n_el = mesh_pt()->nelement();
321  for(unsigned e=0;e<n_el;e++)
322  {
323  //Cast to a fluid element
324  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e));
325 
326  //Set the Reynolds number, etc
327  el_pt->re_pt() = &Global_Parameters::Re;
328  el_pt->re_st_pt() = &Global_Parameters::ReSt;
329  }
330 
331 
332  // Switch off ALE if required
334 
335  // Pin redudant pressure dofs
337  pin_redundant_nodal_pressures(mesh_pt()->element_pt());
338 
339  // Now pin the pressure in first element at value 0 to 0.0
340  fix_pressure(0,0,0.0);
341 
342  //Assgn equation numbers
343  cout << assign_eqn_numbers() << std::endl;
344 
345 } // end of constructor
Definition: two_d_unsteady_heat_2adapt_load_balance.cc:51
void possibly_disable_ALE()
Switch off ALE terms.
Definition: ray_circ_cavity_adapt.cc:204
bool Use_ALE
Trace file.
Definition: ray_circ_cavity_adapt.cc:250
Definition: geom_objects.h:101
Definition: refineable_navier_stokes_elements.h:322
Definition: quarter_circle_sector_mesh.template.h:188
Definition: error_estimator.h:266
EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC bfloat16 atan(const bfloat16 &a)
Definition: BFloat16.h:636
Z2ErrorEstimator * error_estimator_pt
Definition: MortaringCantileverCompareToNonMortaring.cpp:190

References oomph::Problem::add_time_stepper_pt(), oomph::Problem::assign_eqn_numbers(), Eigen::bfloat16_impl::atan(), e(), MeshRefinement::error_estimator_pt, RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure(), RayleighProblem< ELEMENT, TIMESTEPPER >::mesh_pt(), RayleighProblem< ELEMENT, TIMESTEPPER >::possibly_disable_ALE(), Global_Parameters::Re, Global_Parameters::ReSt, and oomph::Problem::time_stepper_pt().

◆ RayleighProblem() [3/3]

template<class ELEMENT , class TIMESTEPPER >
RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem ( const unsigned nx,
const unsigned ny,
const double lx,
const double ly,
const bool use_ale 
)

Constructor: Pass number of elements in x and y directions and lengths and ALE flag

Member Function Documentation

◆ actions_after_adapt()

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_adapt ( )
inlinevirtual

After adaptation: Unpin pressure and pin redudant pressure dofs.

Reimplemented from oomph::Problem.

183  {
184  // Unpin all pressure dofs
186  unpin_all_pressure_dofs(mesh_pt()->element_pt());
187 
188  // Pin redundant pressure dofs
190  pin_redundant_nodal_pressures(mesh_pt()->element_pt());
191 
192  // Now set the first pressure dof in the first element to 0.0
193  fix_pressure(0,0,0.0);
194 
195 
196  // Switch off ALE if required
198 
199  } // end_of_actions_after_adapt

◆ actions_after_newton_solve() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_newton_solve ( )
inlinevirtual

Update after solve is empty.

Reimplemented from oomph::Problem.

133 {}

◆ actions_after_newton_solve() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_newton_solve ( )
inlinevirtual

Update after solve is empty.

Reimplemented from oomph::Problem.

149 {}

◆ actions_after_newton_solve() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_newton_solve ( )
inlinevirtual

Update after solve is empty.

Reimplemented from oomph::Problem.

134 {}

◆ actions_before_implicit_timestep() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_implicit_timestep ( )
inlinevirtual

Actions that should be performed before each implicit time step. This is needed when one wants to solve a steady problem before timestepping and needs to distinguish between the two cases

Reimplemented from oomph::Problem.

137  {
138  // No slip on upper boundary
139  unsigned ibound=2;
140  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
141  for (unsigned inod=0;inod<num_nod;inod++)
142  {
143  // Get exact solution
144  double y=mesh_pt()->boundary_node_pt(ibound,inod)->x(1);
145  double time=time_pt()->time();
146  double soln;
148 
149  // Assign exact solution to boundary
150  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(0,soln);
151  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(1,0.0);
152  }
153 
154  } // end of actions_before_implicit_timestep
Time *& time_pt()
Return a pointer to the global time object.
Definition: problem.h:1504
double & time()
Return the current value of continuous time.
Definition: problem.cc:11531
double & time()
Return the current value of the continuous time.
Definition: timesteppers.h:123
Scalar * y
Definition: level1_cplx_impl.h:128
void get_exact_u(const double &t, const Vector< double > &x, Vector< double > &u)
Exact solution of the problem as a vector.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:68

References ExactSoln::get_exact_u(), and y.

◆ actions_before_implicit_timestep() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_implicit_timestep ( )
inlinevirtual

Actions that should be performed before each implicit time step. This is needed when one wants to solve a steady problem before timestepping and needs to distinguish between the two cases

Reimplemented from oomph::Problem.

153  {
154  // No slip on lower boundary
155  unsigned ibound=0;
156  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
157  for (unsigned inod=0;inod<num_nod;inod++)
158  {
159  // Get exact solution
160  //double x=mesh_pt()->boundary_node_pt(ibound,inod)->x(0);
161  double time=time_pt()->time();
162  double veloc=sin(time*2.0*MathematicalConstants::Pi);
163 
164  // Assign velocity
165  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(0,veloc);
166  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(1,0.0);
167  }
168 
169  } // end of actions_before_implicit_timestep
AnnoyingScalar sin(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:137
double Pi
Definition: two_d_biharmonic.cc:235

References BiharmonicTestFunctions2::Pi, and sin().

◆ actions_before_implicit_timestep() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_implicit_timestep ( )
inlinevirtual

Actions that should be performed before each implicit time step. This is needed when one wants to solve a steady problem before timestepping and needs to distinguish between the two cases

Reimplemented from oomph::Problem.

138  {
139  // No slip on upper boundary
140  unsigned ibound=2;
141  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
142  for (unsigned inod=0;inod<num_nod;inod++)
143  {
144  // Get exact solution
145  double y=mesh_pt()->boundary_node_pt(ibound,inod)->x(1);
146  double time=time_pt()->time();
147  double soln;
149 
150  // Assign exact solution to boundary
151  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(0,soln);
152  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(1,0.0);
153  }
154 
155  } // end of actions_before_implicit_timestep

References ExactSoln::get_exact_u(), and y.

◆ actions_before_newton_solve() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_newton_solve ( )
inlinevirtual

Any actions that are to be performed before a complete Newton solve (e.g. adjust boundary conditions). CAREFUL: This step should (and if the FD-based LinearSolver FD_LU is used, must) only update values that are pinned!

Reimplemented from oomph::Problem.

130 {}

◆ actions_before_newton_solve() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_newton_solve ( )
inlinevirtual

Any actions that are to be performed before a complete Newton solve (e.g. adjust boundary conditions). CAREFUL: This step should (and if the FD-based LinearSolver FD_LU is used, must) only update values that are pinned!

Reimplemented from oomph::Problem.

146 {}

◆ actions_before_newton_solve() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_newton_solve ( )
inlinevirtual

Any actions that are to be performed before a complete Newton solve (e.g. adjust boundary conditions). CAREFUL: This step should (and if the FD-based LinearSolver FD_LU is used, must) only update values that are pinned!

Reimplemented from oomph::Problem.

131 {}

◆ doc_solution() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::doc_solution ( DocInfo doc_info)

Doc the solution.

333 {
334  ofstream some_file;
335  char filename[100];
336 
337  // Number of plot points
338  unsigned npts=5;
339 
340  // Output solution
341  sprintf(filename,"%s/soln%i.dat",doc_info.directory().c_str(),
342  doc_info.number());
343  some_file.open(filename);
344  mesh_pt()->output(some_file,npts);
345 
346  // Write file as a tecplot text object
347  some_file << "TEXT X=2.5,Y=93.6,F=HELV,HU=POINT,C=BLUE,H=26,T=\"time = "
348  << time_pt()->time() << "\"";
349  // ...and draw a horizontal line whose length is proportional
350  // to the elapsed time
351  some_file << "GEOMETRY X=2.5,Y=98,T=LINE,C=BLUE,LT=0.4" << std::endl;
352  some_file << "1" << std::endl;
353  some_file << "2" << std::endl;
354  some_file << " 0 0" << std::endl;
355  some_file << time_pt()->time()*20.0 << " 0" << std::endl;
356 
357  some_file.close();
358 
359  // Output exact solution
360  //----------------------
361  sprintf(filename,"%s/exact_soln%i.dat",doc_info.directory().c_str(),
362  doc_info.number());
363  some_file.open(filename);
364  mesh_pt()->output_fct(some_file,npts,time_pt()->time(),
366  some_file.close();
367 
368  // Doc error
369  //----------
370  double error,norm;
371  sprintf(filename,"%s/error%i.dat",doc_info.directory().c_str(),
372  doc_info.number());
373  some_file.open(filename);
374  mesh_pt()->compute_error(some_file,
376  time_pt()->time(),
377  error,norm);
378  some_file.close();
379 
380  // Doc solution and error
381  //-----------------------
382  cout << "error: " << error << std::endl;
383  cout << "norm : " << norm << std::endl << std::endl;
384 
385  // Get time, position and exact soln at control node
386  unsigned n_control=37;
387  Vector<double> x(2), u(2);
388  double time=time_pt()->time();
389  Node* node_pt=
390  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(n_control))->node_pt(1);
391  x[0] = node_pt->x(0);
392  x[1] = node_pt->x(1);
394 
395  // Write trace file
396  Trace_file << time << " "
397  << x[0] << " "
398  << x[1] << " "
399  << node_pt->value(0) << " "
400  << node_pt->value(1) << " "
401  << u[0] << " "
402  << u[1] << " "
403  << abs(u[0]-node_pt->value(0)) << " "
404  << abs(u[1]-node_pt->value(1)) << " "
405  << error << " "
406  << norm << " "
407  << std::endl;
408 
409 
410 } // end_of_doc_solution
AnnoyingScalar abs(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:135
ofstream Trace_file
Trace file.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:178
std::string directory() const
Output directory.
Definition: oomph_utilities.h:524
unsigned & number()
Number used (e.g.) for labeling output files.
Definition: oomph_utilities.h:554
Definition: nodes.h:906
double & x(const unsigned &i)
Return the i-th nodal coordinate.
Definition: nodes.h:1060
double value(const unsigned &i) const
Definition: nodes.cc:2408
string filename
Definition: MergeRestartFiles.py:39
int error
Definition: calibrate.py:297
list x
Definition: plotDoE.py:28

References abs(), oomph::DocInfo::directory(), calibrate::error, MergeRestartFiles::filename, ExactSoln::get_exact_u(), oomph::DocInfo::number(), oomph::Problem_Parameter::Trace_file, oomph::Node::value(), plotDoE::x, and oomph::Node::x().

◆ doc_solution() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::doc_solution ( DocInfo doc_info)

Doc the solution.

◆ doc_solution() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::doc_solution ( DocInfo doc_info)

Doc the solution.

◆ fix_pressure() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure ( const unsigned e,
const unsigned pdof,
const double pvalue 
)
inlineprivate

Fix pressure in element e at pressure dof pdof and set to pvalue.

171  {
172  //Cast to proper element and fix pressure
173  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e))->
174  fix_pressure(pdof,pvalue);
175  }

References e().

Referenced by RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem().

◆ fix_pressure() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure ( const unsigned e,
const unsigned pdof,
const double pvalue 
)
inlineprivate

Fix pressure in element e at pressure dof pdof and set to pvalue.

240  {
241  //Cast to proper element and fix pressure
242  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e))->
243  fix_pressure(pdof,pvalue);
244  }

References e().

◆ fix_pressure() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure ( const unsigned e,
const unsigned pdof,
const double pvalue 
)
inlineprivate

Fix pressure in element e at pressure dof pdof and set to pvalue.

172  {
173  //Cast to proper element and fix pressure
174  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e))->
175  fix_pressure(pdof,pvalue);
176  }

References e().

◆ mesh_pt()

template<class ELEMENT , class TIMESTEPPER >
RefineableQuarterCircleSectorMesh<ELEMENT>* RayleighProblem< ELEMENT, TIMESTEPPER >::mesh_pt ( )
inline

Cast to specific mesh.

140  {
141  return dynamic_cast<RefineableQuarterCircleSectorMesh<ELEMENT>*>
142  (Problem::mesh_pt());
143  }

Referenced by RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem().

◆ possibly_disable_ALE()

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::possibly_disable_ALE ( )
inline

Switch off ALE terms.

205  {
206  if (Use_ALE)
207  {
208  std::cout << "Enabling ALE " << std::endl;
209  }
210  else
211 
212  {
213  std::cout << "Disabling ALE " << std::endl;
214  }
215 
216  // Loop over the elements
217  unsigned n_element = mesh_pt()->nelement();
218  for(unsigned i=0;i<n_element;i++)
219  {
220  // Upcast from FiniteElement to the present element
221  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(i));
222 
223  // Disable/enable ALE (just to make sure both versions of the
224  // code to the same amount of setup work...)
225  if (Use_ALE)
226  {
227  el_pt->enable_ALE();
228  }
229  else
230  {
231  el_pt->disable_ALE();
232  }
233  }
234  }
int i
Definition: BiCGSTAB_step_by_step.cpp:9

References i.

Referenced by RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem().

◆ set_initial_condition() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::set_initial_condition
virtual

Set initial condition (incl previous timesteps) according to specified function.

Set initial condition: Assign previous and current values from exact solution.

Reimplemented from oomph::Problem.

254 {
255 
256  // Check that timestepper is from the BDF family
257  if (time_stepper_pt()->type()!="BDF")
258  {
259  std::ostringstream error_stream;
260  error_stream << "Timestepper has to be from the BDF family!\n"
261  << "You have specified a timestepper from the "
262  << time_stepper_pt()->type() << " family" << std::endl;
263 
264  throw OomphLibError(error_stream.str(),
267  }
268 
269  // Backup time in global Time object
270  double backed_up_time=time_pt()->time();
271 
272  // Past history needs to be established for t=time0-deltat, ...
273  // Then provide current values (at t=time0) which will also form
274  // the initial guess for the first solve at t=time0+deltat
275 
276  // Vector of exact solution value
277  Vector<double> soln(2);
278  Vector<double> x(2);
279 
280  //Find number of nodes in mesh
281  unsigned num_nod = mesh_pt()->nnode();
282 
283  // Set continuous times at previous timesteps:
284  // How many previous timesteps does the timestepper use?
285  int nprev_steps=time_stepper_pt()->nprev_values();
286  Vector<double> prev_time(nprev_steps+1);
287  for (int t=nprev_steps;t>=0;t--)
288  {
289  prev_time[t]=time_pt()->time(unsigned(t));
290  }
291 
292  // Loop over current & previous timesteps
293  for (int t=nprev_steps;t>=0;t--)
294  {
295  // Continuous time
296  double time=prev_time[t];
297  cout << "setting IC at time =" << time << std::endl;
298 
299  // Loop over the nodes to set initial guess everywhere
300  for (unsigned n=0;n<num_nod;n++)
301  {
302  // Get nodal coordinates
303  x[0]=mesh_pt()->node_pt(n)->x(0);
304  x[1]=mesh_pt()->node_pt(n)->x(1);
305 
306  // Get exact solution at previous time
308 
309  // Assign solution
310  mesh_pt()->node_pt(n)->set_value(t,0,soln[0]);
311  mesh_pt()->node_pt(n)->set_value(t,1,soln[1]);
312 
313  // Loop over coordinate directions: Mesh doesn't move, so
314  // previous position = present position
315  for (unsigned i=0;i<2;i++)
316  {
317  mesh_pt()->node_pt(n)->x(t,i)=x[i];
318  }
319  }
320  }
321 
322  // Reset backed up time for global timestepper
323  time_pt()->time()=backed_up_time;
324 
325 } // end of set_initial_condition
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
Definition: oomph_definitions.h:222
virtual unsigned nprev_values() const =0
Number of previous values available: 0 for static, 1 for BDF<1>,...
std::string type() const
Definition: timesteppers.h:490
type
Definition: compute_granudrum_aor.py:141
t
Definition: plotPSD.py:36
#define OOMPH_EXCEPTION_LOCATION
Definition: oomph_definitions.h:61
#define OOMPH_CURRENT_FUNCTION
Definition: oomph_definitions.h:86

References ExactSoln::get_exact_u(), i, n, OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION, plotPSD::t, compute_granudrum_aor::type, and plotDoE::x.

◆ set_initial_condition() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::set_initial_condition ( )
virtual

Set initial condition (incl previous timesteps) according to specified function.

Reimplemented from oomph::Problem.

◆ set_initial_condition() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::set_initial_condition ( )
virtual

Set initial condition (incl previous timesteps) according to specified function.

Reimplemented from oomph::Problem.

◆ unsteady_run() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::unsteady_run ( DocInfo doc_info)

Run an unsteady simulation.

Unsteady run...

418 {
419 
420  // Open trace file
421  char filename[100];
422  sprintf(filename,"%s/trace.dat",doc_info.directory().c_str());
423  Trace_file.open(filename);
424 
425  // Write tecplot header for trace file
426  Trace_file << "time" << ", "
427  << "x" << ", "
428  << "y" << ", "
429  << "u_1" << ", "
430  << "u_2" << ", "
431  << "u_exact_1" << ", "
432  << "u_exact_2" << ", "
433  << "error_1" << ", "
434  << "error_2" << ", "
435  << "L2 error" << ", "
436  << "L2 norm" << ", " << std::endl;
437 
438  //Set value of dt
439  double dt = 0.025;
440 
442  {
443  // Initialise all history values for an impulsive start
445  cout << "IC = impulsive start" << std::endl;
446  }
447  else
448  {
449  // Initialise timestep
450  initialise_dt(dt);
451  // Set initial conditions.
453  cout << "IC = exact solution" << std::endl;
454  }
455 
456  //Now do many timesteps
457  unsigned ntsteps=80;
458 
459  // If validation run only do 5 timesteps
461  {
462  ntsteps=5;
463  cout << "validation run" << std::endl;
464  }
465 
466  // Doc initial condition
467  doc_solution(doc_info);
468 
469  // increment counter
470  doc_info.number()++;
471 
472  //Loop over the timesteps
473  for(unsigned t=1;t<=ntsteps;t++)
474  {
475  cout << "TIMESTEP " << t << std::endl;
476 
477  //Take one fixed timestep
479 
480  //Output the time
481  cout << "Time is now " << time_pt()->time() << std::endl;
482 
483  // Doc solution
484  doc_solution(doc_info);
485 
486  // increment counter
487  doc_info.number()++;
488  }
489 
490 } // end of unsteady run
void set_initial_condition()
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:253
void doc_solution(DocInfo &doc_info)
Doc the solution.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:332
void initialise_dt(const double &dt)
Definition: problem.cc:13231
void assign_initial_values_impulsive()
Definition: problem.cc:11499
void unsteady_newton_solve(const double &dt)
Definition: problem.cc:10953
unsigned Long_run_flag
Flag for long/short run: Default = perform long run.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:52
unsigned Impulsive_start_flag
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:56

References oomph::DocInfo::directory(), MergeRestartFiles::filename, Global_Parameters::Impulsive_start_flag, Global_Parameters::Long_run_flag, oomph::DocInfo::number(), plotPSD::t, and oomph::Problem_Parameter::Trace_file.

◆ unsteady_run() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::unsteady_run ( DocInfo doc_info)

Run an unsteady simulation.

◆ unsteady_run() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::unsteady_run ( DocInfo doc_info)

Run an unsteady simulation.

Member Data Documentation

◆ Trace_file

template<class ELEMENT , class TIMESTEPPER >
ofstream RayleighProblem< ELEMENT, TIMESTEPPER >::Trace_file
private

Trace file.

◆ Use_ALE

template<class ELEMENT , class TIMESTEPPER >
bool RayleighProblem< ELEMENT, TIMESTEPPER >::Use_ALE
private

Trace file.

Flag for ALE.

Flag for ALE


The documentation for this class was generated from the following files: