RayleighProblem< ELEMENT, TIMESTEPPER > Class Template Reference
+ Inheritance diagram for RayleighProblem< ELEMENT, TIMESTEPPER >:

Public Member Functions

 RayleighProblem (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly)
 Problem constructor. More...
 
void actions_before_newton_solve ()
 
void actions_after_newton_solve ()
 Update after solve is empty. More...
 
void actions_before_implicit_timestep ()
 
void unsteady_run (DocInfo &doc_info)
 Run an unsteady simulation. More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution. More...
 
void set_initial_condition ()
 
 RayleighProblem (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const bool &use_ale)
 Problem constructor. More...
 
RefineableQuarterCircleSectorMesh< ELEMENT > * mesh_pt ()
 Cast to specific mesh. More...
 
void actions_before_newton_solve ()
 
void actions_after_newton_solve ()
 Update after solve is empty. More...
 
void actions_before_implicit_timestep ()
 
void unsteady_run (DocInfo &doc_info)
 Run an unsteady simulation. More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution. More...
 
void set_initial_condition ()
 
void actions_after_adapt ()
 After adaptation: Unpin pressure and pin redudant pressure dofs. More...
 
void possibly_disable_ALE ()
 Switch off ALE terms. More...
 
 RayleighProblem (const unsigned &nx, const unsigned &ny, const double &lx, const double &ly, const bool &use_ale)
 
void actions_before_newton_solve ()
 
void actions_after_newton_solve ()
 Update after solve is empty. More...
 
void actions_before_implicit_timestep ()
 
void unsteady_run (DocInfo &doc_info)
 Run an unsteady simulation. More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution. More...
 
void set_initial_condition ()
 
- Public Member Functions inherited from oomph::Problem
virtual void debug_hook_fct (const unsigned &i)
 
void set_analytic_dparameter (double *const &parameter_pt)
 
void unset_analytic_dparameter (double *const &parameter_pt)
 
bool is_dparameter_calculated_analytically (double *const &parameter_pt)
 
void set_analytic_hessian_products ()
 
void unset_analytic_hessian_products ()
 
bool are_hessian_products_calculated_analytically ()
 
void set_pinned_values_to_zero ()
 
bool distributed () const
 
virtual void actions_before_adapt ()
 
OomphCommunicator * communicator_pt ()
 access function to the oomph-lib communicator More...
 
const OomphCommunicator * communicator_pt () const
 access function to the oomph-lib communicator, const version More...
 
 Problem ()
 
 Problem (const Problem &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const Problem &)=delete
 Broken assignment operator. More...
 
virtual ~Problem ()
 Virtual destructor to clean up memory. More...
 
Mesh *& mesh_pt ()
 Return a pointer to the global mesh. More...
 
Mesh *const & mesh_pt () const
 Return a pointer to the global mesh (const version) More...
 
Mesh *& mesh_pt (const unsigned &imesh)
 
Mesh *const & mesh_pt (const unsigned &imesh) const
 Return a pointer to the i-th submesh (const version) More...
 
unsigned nsub_mesh () const
 Return number of submeshes. More...
 
unsigned add_sub_mesh (Mesh *const &mesh_pt)
 
void flush_sub_meshes ()
 
void build_global_mesh ()
 
void rebuild_global_mesh ()
 
LinearSolver *& linear_solver_pt ()
 Return a pointer to the linear solver object. More...
 
LinearSolver *const & linear_solver_pt () const
 Return a pointer to the linear solver object (const version) More...
 
LinearSolver *& mass_matrix_solver_for_explicit_timestepper_pt ()
 
LinearSolver * mass_matrix_solver_for_explicit_timestepper_pt () const
 
EigenSolver *& eigen_solver_pt ()
 Return a pointer to the eigen solver object. More...
 
EigenSolver *const & eigen_solver_pt () const
 Return a pointer to the eigen solver object (const version) More...
 
Time *& time_pt ()
 Return a pointer to the global time object. More...
 
Time * time_pt () const
 Return a pointer to the global time object (const version). More...
 
double & time ()
 Return the current value of continuous time. More...
 
double time () const
 Return the current value of continuous time (const version) More...
 
TimeStepper *& time_stepper_pt ()
 
const TimeStepper * time_stepper_pt () const
 
TimeStepper *& time_stepper_pt (const unsigned &i)
 Return a pointer to the i-th timestepper. More...
 
ExplicitTimeStepper *& explicit_time_stepper_pt ()
 Return a pointer to the explicit timestepper. More...
 
unsigned long set_timestepper_for_all_data (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data=false)
 
virtual void shift_time_values ()
 Shift all values along to prepare for next timestep. More...
 
AssemblyHandler *& assembly_handler_pt ()
 Return a pointer to the assembly handler object. More...
 
AssemblyHandler *const & assembly_handler_pt () const
 Return a pointer to the assembly handler object (const version) More...
 
double & minimum_dt ()
 Access function to min timestep in adaptive timestepping. More...
 
double & maximum_dt ()
 Access function to max timestep in adaptive timestepping. More...
 
unsigned & max_newton_iterations ()
 Access function to max Newton iterations before giving up. More...
 
void problem_is_nonlinear (const bool &prob_lin)
 Access function to Problem_is_nonlinear. More...
 
double & max_residuals ()
 
bool & time_adaptive_newton_crash_on_solve_fail ()
 Access function for Time_adaptive_newton_crash_on_solve_fail. More...
 
double & newton_solver_tolerance ()
 
void add_time_stepper_pt (TimeStepper *const &time_stepper_pt)
 
void set_explicit_time_stepper_pt (ExplicitTimeStepper *const &explicit_time_stepper_pt)
 
void initialise_dt (const double &dt)
 
void initialise_dt (const Vector< double > &dt)
 
Data *& global_data_pt (const unsigned &i)
 Return a pointer to the the i-th global data object. More...
 
void add_global_data (Data *const &global_data_pt)
 
void flush_global_data ()
 
LinearAlgebraDistribution *const & dof_distribution_pt () const
 Return the pointer to the dof distribution (read-only) More...
 
unsigned long ndof () const
 Return the number of dofs. More...
 
unsigned ntime_stepper () const
 Return the number of time steppers. More...
 
unsigned nglobal_data () const
 Return the number of global data values. More...
 
unsigned self_test ()
 Self-test: Check meshes and global data. Return 0 for OK. More...
 
void enable_store_local_dof_pt_in_elements ()
 
void disable_store_local_dof_pt_in_elements ()
 
unsigned long assign_eqn_numbers (const bool &assign_local_eqn_numbers=true)
 
void describe_dofs (std::ostream &out= *(oomph_info.stream_pt())) const
 
void enable_discontinuous_formulation ()
 
void disable_discontinuous_formulation ()
 
void get_dofs (DoubleVector &dofs) const
 
void get_dofs (const unsigned &t, DoubleVector &dofs) const
 Return vector of the t'th history value of all dofs. More...
 
void set_dofs (const DoubleVector &dofs)
 Set the values of the dofs. More...
 
void set_dofs (const unsigned &t, DoubleVector &dofs)
 Set the history values of the dofs. More...
 
void set_dofs (const unsigned &t, Vector< double * > &dof_pt)
 
void add_to_dofs (const double &lambda, const DoubleVector &increment_dofs)
 Add lambda x incremenet_dofs[l] to the l-th dof. More...
 
double * global_dof_pt (const unsigned &i)
 
double & dof (const unsigned &i)
 i-th dof in the problem More...
 
double dof (const unsigned &i) const
 i-th dof in the problem (const version) More...
 
double *& dof_pt (const unsigned &i)
 Pointer to i-th dof in the problem. More...
 
double * dof_pt (const unsigned &i) const
 Pointer to i-th dof in the problem (const version) More...
 
virtual void get_inverse_mass_matrix_times_residuals (DoubleVector &Mres)
 
virtual void get_dvaluesdt (DoubleVector &f)
 
virtual void get_residuals (DoubleVector &residuals)
 Get the total residuals Vector for the problem. More...
 
virtual void get_jacobian (DoubleVector &residuals, DenseDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, CRDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, CCDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, SumOfMatrices &jacobian)
 
void get_fd_jacobian (DoubleVector &residuals, DenseMatrix< double > &jacobian)
 Get the full Jacobian by finite differencing. More...
 
void get_derivative_wrt_global_parameter (double *const &parameter_pt, DoubleVector &result)
 
void get_hessian_vector_products (DoubleVectorWithHaloEntries const &Y, Vector< DoubleVectorWithHaloEntries > const &C, Vector< DoubleVectorWithHaloEntries > &product)
 
void solve_eigenproblem (const unsigned &n_eval, Vector< std::complex< double >> &eigenvalue, Vector< DoubleVector > &eigenvector, const bool &steady=true)
 Solve the eigenproblem. More...
 
void solve_eigenproblem (const unsigned &n_eval, Vector< std::complex< double >> &eigenvalue, const bool &steady=true)
 
virtual void get_eigenproblem_matrices (CRDoubleMatrix &mass_matrix, CRDoubleMatrix &main_matrix, const double &shift=0.0)
 
void assign_eigenvector_to_dofs (DoubleVector &eigenvector)
 Assign the eigenvector passed to the function to the dofs. More...
 
void add_eigenvector_to_dofs (const double &epsilon, const DoubleVector &eigenvector)
 
void store_current_dof_values ()
 Store the current values of the degrees of freedom. More...
 
void restore_dof_values ()
 Restore the stored values of the degrees of freedom. More...
 
void enable_jacobian_reuse ()
 
void disable_jacobian_reuse ()
 Disable recycling of Jacobian in Newton iteration. More...
 
bool jacobian_reuse_is_enabled ()
 Is recycling of Jacobian in Newton iteration enabled? More...
 
bool & use_predictor_values_as_initial_guess ()
 
void newton_solve ()
 Use Newton method to solve the problem. More...
 
void enable_globally_convergent_newton_method ()
 enable globally convergent Newton method More...
 
void disable_globally_convergent_newton_method ()
 disable globally convergent Newton method More...
 
void newton_solve (unsigned const &max_adapt)
 
void steady_newton_solve (unsigned const &max_adapt=0)
 
void copy (Problem *orig_problem_pt)
 
virtual Problem * make_copy ()
 
virtual void read (std::ifstream &restart_file, bool &unsteady_restart)
 
virtual void read (std::ifstream &restart_file)
 
virtual void dump (std::ofstream &dump_file) const
 
void dump (const std::string &dump_file_name) const
 
void delete_all_external_storage ()
 
virtual void symmetrise_eigenfunction_for_adaptive_pitchfork_tracking ()
 
double * bifurcation_parameter_pt () const
 
void get_bifurcation_eigenfunction (Vector< DoubleVector > &eigenfunction)
 
void activate_fold_tracking (double *const &parameter_pt, const bool &block_solve=true)
 
void activate_bifurcation_tracking (double *const &parameter_pt, const DoubleVector &eigenvector, const bool &block_solve=true)
 
void activate_bifurcation_tracking (double *const &parameter_pt, const DoubleVector &eigenvector, const DoubleVector &normalisation, const bool &block_solve=true)
 
void activate_pitchfork_tracking (double *const &parameter_pt, const DoubleVector &symmetry_vector, const bool &block_solve=true)
 
void activate_hopf_tracking (double *const &parameter_pt, const bool &block_solve=true)
 
void activate_hopf_tracking (double *const &parameter_pt, const double &omega, const DoubleVector &null_real, const DoubleVector &null_imag, const bool &block_solve=true)
 
void deactivate_bifurcation_tracking ()
 
void reset_assembly_handler_to_default ()
 Reset the system to the standard non-augemented state. More...
 
double arc_length_step_solve (double *const &parameter_pt, const double &ds, const unsigned &max_adapt=0)
 
double arc_length_step_solve (Data *const &data_pt, const unsigned &data_index, const double &ds, const unsigned &max_adapt=0)
 
void reset_arc_length_parameters ()
 
int & sign_of_jacobian ()
 
void explicit_timestep (const double &dt, const bool &shift_values=true)
 Take an explicit timestep of size dt. More...
 
void unsteady_newton_solve (const double &dt)
 
void unsteady_newton_solve (const double &dt, const bool &shift_values)
 
void unsteady_newton_solve (const double &dt, const unsigned &max_adapt, const bool &first, const bool &shift=true)
 
double doubly_adaptive_unsteady_newton_solve (const double &dt, const double &epsilon, const unsigned &max_adapt, const bool &first, const bool &shift=true)
 
double doubly_adaptive_unsteady_newton_solve (const double &dt, const double &epsilon, const unsigned &max_adapt, const unsigned &suppress_resolve_after_spatial_adapt_flag, const bool &first, const bool &shift=true)
 
double adaptive_unsteady_newton_solve (const double &dt_desired, const double &epsilon)
 
double adaptive_unsteady_newton_solve (const double &dt_desired, const double &epsilon, const bool &shift_values)
 
void assign_initial_values_impulsive ()
 
void assign_initial_values_impulsive (const double &dt)
 
void calculate_predictions ()
 Calculate predictions. More...
 
void enable_mass_matrix_reuse ()
 
void disable_mass_matrix_reuse ()
 
bool mass_matrix_reuse_is_enabled ()
 Return whether the mass matrix is being reused. More...
 
void refine_uniformly (const Vector< unsigned > &nrefine_for_mesh)
 
void refine_uniformly (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh)
 
void refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void refine_uniformly (DocInfo &doc_info)
 
void refine_uniformly_and_prune (DocInfo &doc_info)
 
void refine_uniformly ()
 
void refine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform refinement for submesh i_mesh with documentation. More...
 
void refine_uniformly (const unsigned &i_mesh)
 Do uniform refinement for submesh i_mesh without documentation. More...
 
void p_refine_uniformly (const Vector< unsigned > &nrefine_for_mesh)
 
void p_refine_uniformly (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void p_refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh)
 
void p_refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void p_refine_uniformly (DocInfo &doc_info)
 
void p_refine_uniformly_and_prune (DocInfo &doc_info)
 
void p_refine_uniformly ()
 
void p_refine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform p-refinement for submesh i_mesh with documentation. More...
 
void p_refine_uniformly (const unsigned &i_mesh)
 Do uniform p-refinement for submesh i_mesh without documentation. More...
 
void refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
void refine_selected_elements (const Vector< RefineableElement * > &elements_to_be_refined_pt)
 
void refine_selected_elements (const unsigned &i_mesh, const Vector< unsigned > &elements_to_be_refined)
 
void refine_selected_elements (const unsigned &i_mesh, const Vector< RefineableElement * > &elements_to_be_refined_pt)
 
void refine_selected_elements (const Vector< Vector< unsigned >> &elements_to_be_refined)
 
void refine_selected_elements (const Vector< Vector< RefineableElement * >> &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const unsigned &i_mesh, const Vector< unsigned > &elements_to_be_refined)
 
void p_refine_selected_elements (const unsigned &i_mesh, const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const Vector< Vector< unsigned >> &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< Vector< PRefineableElement * >> &elements_to_be_refined_pt)
 
unsigned unrefine_uniformly ()
 
unsigned unrefine_uniformly (const unsigned &i_mesh)
 
void p_unrefine_uniformly (DocInfo &doc_info)
 
void p_unrefine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform p-unrefinement for submesh i_mesh without documentation. More...
 
void adapt (unsigned &n_refined, unsigned &n_unrefined)
 
void adapt ()
 
void p_adapt (unsigned &n_refined, unsigned &n_unrefined)
 
void p_adapt ()
 
void adapt_based_on_error_estimates (unsigned &n_refined, unsigned &n_unrefined, Vector< Vector< double >> &elemental_error)
 
void adapt_based_on_error_estimates (Vector< Vector< double >> &elemental_error)
 
void get_all_error_estimates (Vector< Vector< double >> &elemental_error)
 
void doc_errors (DocInfo &doc_info)
 Get max and min error for all elements in submeshes. More...
 
void doc_errors ()
 Get max and min error for all elements in submeshes. More...
 
void enable_info_in_newton_solve ()
 
void disable_info_in_newton_solve ()
 Disable the output of information when in the newton solver. More...
 
- Public Member Functions inherited from oomph::ExplicitTimeSteppableObject
 ExplicitTimeSteppableObject ()
 Empty constructor. More...
 
 ExplicitTimeSteppableObject (const ExplicitTimeSteppableObject &)=delete
 Broken copy constructor. More...
 
void operator= (const ExplicitTimeSteppableObject &)=delete
 Broken assignment operator. More...
 
virtual ~ExplicitTimeSteppableObject ()
 Empty destructor. More...
 
virtual void actions_before_explicit_stage ()
 
virtual void actions_after_explicit_stage ()
 

Private Member Functions

void fix_pressure (const unsigned &e, const unsigned &pdof, const double &pvalue)
 Fix pressure in element e at pressure dof pdof and set to pvalue. More...
 
void fix_pressure (const unsigned &e, const unsigned &pdof, const double &pvalue)
 Fix pressure in element e at pressure dof pdof and set to pvalue. More...
 
void fix_pressure (const unsigned &e, const unsigned &pdof, const double &pvalue)
 Fix pressure in element e at pressure dof pdof and set to pvalue. More...
 

Private Attributes

ofstream Trace_file
 Trace file. More...
 
bool Use_ALE
 Trace file. More...
 

Additional Inherited Members

- Public Types inherited from oomph::Problem
typedef void(* SpatialErrorEstimatorFctPt) (Mesh *&mesh_pt, Vector< double > &elemental_error)
 Function pointer for spatial error estimator. More...
 
typedef void(* SpatialErrorEstimatorWithDocFctPt) (Mesh *&mesh_pt, Vector< double > &elemental_error, DocInfo &doc_info)
 Function pointer for spatial error estimator with doc. More...
 
- Public Attributes inherited from oomph::Problem
bool Shut_up_in_newton_solve
 
- Static Public Attributes inherited from oomph::Problem
static bool Suppress_warning_about_actions_before_read_unstructured_meshes
 
- Protected Types inherited from oomph::Problem
enum  Assembly_method {
  Perform_assembly_using_vectors_of_pairs , Perform_assembly_using_two_vectors , Perform_assembly_using_maps , Perform_assembly_using_lists ,
  Perform_assembly_using_two_arrays
}
 Enumerated flags to determine which sparse assembly method is used. More...
 
- Protected Member Functions inherited from oomph::Problem
unsigned setup_element_count_per_dof ()
 
virtual void sparse_assemble_row_or_column_compressed (Vector< int * > &column_or_row_index, Vector< int * > &row_or_column_start, Vector< double * > &value, Vector< unsigned > &nnz, Vector< double * > &residual, bool compressed_row_flag)
 
virtual void actions_before_newton_convergence_check ()
 
virtual void actions_before_newton_step ()
 
virtual void actions_after_newton_step ()
 
virtual void actions_after_implicit_timestep ()
 
virtual void actions_after_implicit_timestep_and_error_estimation ()
 
virtual void actions_before_explicit_timestep ()
 Actions that should be performed before each explicit time step. More...
 
virtual void actions_after_explicit_timestep ()
 Actions that should be performed after each explicit time step. More...
 
virtual void actions_before_read_unstructured_meshes ()
 
virtual void actions_after_read_unstructured_meshes ()
 
virtual void actions_after_change_in_global_parameter (double *const &parameter_pt)
 
virtual void actions_after_change_in_bifurcation_parameter ()
 
virtual void actions_after_parameter_increase (double *const &parameter_pt)
 
double & dof_derivative (const unsigned &i)
 
double & dof_current (const unsigned &i)
 
virtual double global_temporal_error_norm ()
 
unsigned newton_solve_continuation (double *const &parameter_pt)
 
unsigned newton_solve_continuation (double *const &parameter_pt, DoubleVector &z)
 
void calculate_continuation_derivatives (double *const &parameter_pt)
 
void calculate_continuation_derivatives (const DoubleVector &z)
 
void calculate_continuation_derivatives_fd (double *const &parameter_pt)
 
bool does_pointer_correspond_to_problem_data (double *const &parameter_pt)
 
void set_consistent_pinned_values_for_continuation ()
 
- Protected Attributes inherited from oomph::Problem
Vector< Problem * > Copy_of_problem_pt
 
std::map< double *, bool > Calculate_dparameter_analytic
 
bool Calculate_hessian_products_analytic
 
LinearAlgebraDistribution * Dof_distribution_pt
 
Vector< double * > Dof_pt
 Vector of pointers to dofs. More...
 
DoubleVectorWithHaloEntries Element_count_per_dof
 
double Relaxation_factor
 
double Newton_solver_tolerance
 
unsigned Max_newton_iterations
 Maximum number of Newton iterations. More...
 
unsigned Nnewton_iter_taken
 
Vector< double > Max_res
 Maximum residuals at start and after each newton iteration. More...
 
double Max_residuals
 
bool Time_adaptive_newton_crash_on_solve_fail
 
bool Jacobian_reuse_is_enabled
 Is re-use of Jacobian in Newton iteration enabled? Default: false. More...
 
bool Jacobian_has_been_computed
 
bool Problem_is_nonlinear
 
bool Pause_at_end_of_sparse_assembly
 
bool Doc_time_in_distribute
 
unsigned Sparse_assembly_method
 
unsigned Sparse_assemble_with_arrays_initial_allocation
 
unsigned Sparse_assemble_with_arrays_allocation_increment
 
Vector< Vector< unsigned > > Sparse_assemble_with_arrays_previous_allocation
 
double Numerical_zero_for_sparse_assembly
 
double FD_step_used_in_get_hessian_vector_products
 
bool Mass_matrix_reuse_is_enabled
 
bool Mass_matrix_has_been_computed
 
bool Discontinuous_element_formulation
 
double Minimum_dt
 Minimum desired dt: if dt falls below this value, exit. More...
 
double Maximum_dt
 Maximum desired dt. More...
 
double DTSF_max_increase
 
double DTSF_min_decrease
 
double Minimum_dt_but_still_proceed
 
bool Scale_arc_length
 Boolean to control whether arc-length should be scaled. More...
 
double Desired_proportion_of_arc_length
 Proportion of the arc-length to taken by the parameter. More...
 
double Theta_squared
 
int Sign_of_jacobian
 Storage for the sign of the global Jacobian. More...
 
double Continuation_direction
 
double Parameter_derivative
 Storage for the derivative of the global parameter wrt arc-length. More...
 
double Parameter_current
 Storage for the present value of the global parameter. More...
 
bool Use_continuation_timestepper
 Boolean to control original or new storage of dof stuff. More...
 
unsigned Dof_derivative_offset
 
unsigned Dof_current_offset
 
Vector< double > Dof_derivative
 Storage for the derivative of the problem variables wrt arc-length. More...
 
Vector< double > Dof_current
 Storage for the present values of the variables. More...
 
double Ds_current
 Storage for the current step value. More...
 
unsigned Desired_newton_iterations_ds
 
double Minimum_ds
 Minimum desired value of arc-length. More...
 
bool Bifurcation_detection
 Boolean to control bifurcation detection via determinant of Jacobian. More...
 
bool Bisect_to_find_bifurcation
 Boolean to control wheter bisection is used to located bifurcation. More...
 
bool First_jacobian_sign_change
 Boolean to indicate whether a sign change has occured in the Jacobian. More...
 
bool Arc_length_step_taken
 Boolean to indicate whether an arc-length step has been taken. More...
 
bool Use_finite_differences_for_continuation_derivatives
 
OomphCommunicator * Communicator_pt
 The communicator for this problem. More...
 
bool Always_take_one_newton_step
 
double Timestep_reduction_factor_after_nonconvergence
 
bool Keep_temporal_error_below_tolerance
 
- Static Protected Attributes inherited from oomph::Problem
static ContinuationStorageScheme Continuation_time_stepper
 Storage for the single static continuation timestorage object. More...
 

Detailed Description

template<class ELEMENT, class TIMESTEPPER>
class RayleighProblem< ELEMENT, TIMESTEPPER >

Rayleigh-type problem: 2D channel whose upper wall oscillates periodically.

Constructor & Destructor Documentation

◆ RayleighProblem() [1/3]

template<class ELEMENT , class TIMESTEPPER >
RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem ( const unsigned &  nx,
const unsigned &  ny,
const double &  lx,
const double &  ly 
)

Problem constructor.

Constructor: Pass number of elements in x and y directions and lengths

190 {
191  //Allocate the timestepper
192  add_time_stepper_pt(new TIMESTEPPER);
193 
194  //Now create the mesh with periodic boundary conditions in x direction
195  bool periodic_in_x=true;
196  Problem::mesh_pt() =
197  new RectangularQuadMesh<ELEMENT>(nx,ny,lx,ly,periodic_in_x,
198  time_stepper_pt());
199 
200  // Set the boundary conditions for this problem: All nodes are
201  // free by default -- just pin the ones that have Dirichlet conditions
202  // here
203  unsigned num_bound=mesh_pt()->nboundary();
204  for(unsigned ibound=0;ibound<num_bound;ibound++)
205  {
206  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
207  for (unsigned inod=0;inod<num_nod;inod++)
208  {
209  // No slip on top and bottom
210  if ((ibound==0)||(ibound==2))
211  {
212  mesh_pt()->boundary_node_pt(ibound,inod)->pin(0);
213  mesh_pt()->boundary_node_pt(ibound,inod)->pin(1);
214  }
215  // Horizontal outflow on the left (and right -- right bc not
216  // strictly necessary because of symmetry)
217  else if ((ibound==1)||(ibound==3))
218  {
219  mesh_pt()->boundary_node_pt(ibound,inod)->pin(1);
220  }
221  }
222  } // end loop over boundaries
223 
224  //Complete the problem setup to make the elements fully functional
225 
226  //Loop over the elements
227  unsigned n_el = mesh_pt()->nelement();
228  for(unsigned e=0;e<n_el;e++)
229  {
230  //Cast to a fluid element
231  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e));
232 
233  //Set the Reynolds number, etc
234  el_pt->re_pt() = &Global_Parameters::Re;
235  el_pt->re_st_pt() = &Global_Parameters::ReSt;
236  }
237 
238  // Now pin the pressure in first element at value 0 to 0.0
239  fix_pressure(0,0,0.0);
240 
241  //Assgn equation numbers
242  cout << assign_eqn_numbers() << std::endl;
243 } // end of constructor
Array< double, 1, 3 > e(1./3., 0.5, 2.)
RefineableQuarterCircleSectorMesh< ELEMENT > * mesh_pt()
Cast to specific mesh.
Definition: ray_circ_cavity_adapt.cc:139
void fix_pressure(const unsigned &e, const unsigned &pdof, const double &pvalue)
Fix pressure in element e at pressure dof pdof and set to pvalue.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:169
void add_time_stepper_pt(TimeStepper *const &time_stepper_pt)
Definition: problem.cc:1545
unsigned long assign_eqn_numbers(const bool &assign_local_eqn_numbers=true)
Definition: problem.cc:1989
TimeStepper *& time_stepper_pt()
Definition: problem.h:1524
Definition: rectangular_quadmesh.template.h:59
double ReSt
Womersley number: Product of Reynolds and Strouhal numbers.
Definition: fsi_channel_with_leaflet_precond.cc:225
double Re
reynolds number
Definition: adaptive_hopf.cc:54
const double ly
Definition: ConstraintElementsUnitTest.cpp:34
const double lx
Definition: ConstraintElementsUnitTest.cpp:33
const unsigned nx
Definition: ConstraintElementsUnitTest.cpp:30
const unsigned ny
Definition: ConstraintElementsUnitTest.cpp:31

References e(), Mesh_Parameters::lx, Mesh_Parameters::ly, Mesh_Parameters::nx, Mesh_Parameters::ny, Global_Parameters::Re, and Global_Parameters::ReSt.

◆ RayleighProblem() [2/3]

template<class ELEMENT , class TIMESTEPPER >
RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem ( const unsigned &  nx,
const unsigned &  ny,
const double &  lx,
const double &  ly,
const bool &  use_ale 
)

Problem constructor.

Constructor: Pass number of elements in x and y directions and lengths and ALE flag

262  : Use_ALE(use_ale)
263 {
264  //Allocate the timestepper
265  add_time_stepper_pt(new TIMESTEPPER);
266 
267  // Build geometric object that parametrises the curved boundary
268  // of the domain
269 
270  // Half axes for ellipse
271  double a_ellipse=1.0;
272  double b_ellipse=1.0;
273 
274  // Setup elliptical ring
275  GeomObject* Wall_pt=new MyEllipse(a_ellipse,b_ellipse);
276 
277  // End points for wall
278  double xi_lo=0.0;
279  double xi_hi=2.0*atan(1.0);
280 
281  //Now create the mesh
282  double fract_mid=0.5;
283  Problem::mesh_pt() = new
285  Wall_pt,xi_lo,fract_mid,xi_hi,time_stepper_pt());
286 
287  // Set error estimator
290  mesh_pt())->spatial_error_estimator_pt()=error_estimator_pt;
291 
292 
293  mesh_pt()->refine_uniformly();
294  mesh_pt()->refine_uniformly();
295 
296  //Now create the mesh with periodic boundary conditions in x direction
297  //bool periodic_in_x=true;
298  //Problem::mesh_pt() =
299  //new RectangularQuadMesh<ELEMENT>(nx,ny,lx,ly,periodic_in_x,
300  // time_stepper_pt());
301 
302  // Set the boundary conditions for this problem: All nodes are
303  // free by default -- just pin the ones that have Dirichlet conditions
304  // here
305  unsigned num_bound=mesh_pt()->nboundary();
306  for(unsigned ibound=0;ibound<num_bound;ibound++)
307  {
308  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
309  for (unsigned inod=0;inod<num_nod;inod++)
310  {
311  mesh_pt()->boundary_node_pt(ibound,inod)->pin(0);
312  mesh_pt()->boundary_node_pt(ibound,inod)->pin(1);
313  }
314  } // end loop over boundaries
315 
316 
317  //Complete the problem setup to make the elements fully functional
318 
319  //Loop over the elements
320  unsigned n_el = mesh_pt()->nelement();
321  for(unsigned e=0;e<n_el;e++)
322  {
323  //Cast to a fluid element
324  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e));
325 
326  //Set the Reynolds number, etc
327  el_pt->re_pt() = &Global_Parameters::Re;
328  el_pt->re_st_pt() = &Global_Parameters::ReSt;
329  }
330 
331 
332  // Switch off ALE if required
334 
335  // Pin redudant pressure dofs
337  pin_redundant_nodal_pressures(mesh_pt()->element_pt());
338 
339  // Now pin the pressure in first element at value 0 to 0.0
340  fix_pressure(0,0,0.0);
341 
342  //Assgn equation numbers
343  cout << assign_eqn_numbers() << std::endl;
344 
345 } // end of constructor
Definition: two_d_unsteady_heat_2adapt_load_balance.cc:51
void possibly_disable_ALE()
Switch off ALE terms.
Definition: ray_circ_cavity_adapt.cc:204
bool Use_ALE
Trace file.
Definition: ray_circ_cavity_adapt.cc:250
Definition: geom_objects.h:101
Definition: refineable_navier_stokes_elements.h:322
Definition: quarter_circle_sector_mesh.template.h:188
Definition: error_estimator.h:266
EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC bfloat16 atan(const bfloat16 &a)
Definition: BFloat16.h:636
Z2ErrorEstimator * error_estimator_pt
Definition: MortaringCantileverCompareToNonMortaring.cpp:190

References oomph::Problem::add_time_stepper_pt(), oomph::Problem::assign_eqn_numbers(), Eigen::bfloat16_impl::atan(), e(), MeshRefinement::error_estimator_pt, RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure(), RayleighProblem< ELEMENT, TIMESTEPPER >::mesh_pt(), RayleighProblem< ELEMENT, TIMESTEPPER >::possibly_disable_ALE(), Global_Parameters::Re, Global_Parameters::ReSt, and oomph::Problem::time_stepper_pt().

◆ RayleighProblem() [3/3]

template<class ELEMENT , class TIMESTEPPER >
RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem ( const unsigned &  nx,
const unsigned &  ny,
const double &  lx,
const double &  ly,
const bool &  use_ale 
)

Constructor: Pass number of elements in x and y directions and lengths and ALE flag

Member Function Documentation

◆ actions_after_adapt()

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_adapt ( )
inlinevirtual

After adaptation: Unpin pressure and pin redudant pressure dofs.

Reimplemented from oomph::Problem.

183  {
184  // Unpin all pressure dofs
186  unpin_all_pressure_dofs(mesh_pt()->element_pt());
187 
188  // Pin redundant pressure dofs
190  pin_redundant_nodal_pressures(mesh_pt()->element_pt());
191 
192  // Now set the first pressure dof in the first element to 0.0
193  fix_pressure(0,0,0.0);
194 
195 
196  // Switch off ALE if required
198 
199  } // end_of_actions_after_adapt

◆ actions_after_newton_solve() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_newton_solve ( )
inlinevirtual

Update after solve is empty.

Reimplemented from oomph::Problem.

133 {}

◆ actions_after_newton_solve() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_newton_solve ( )
inlinevirtual

Update after solve is empty.

Reimplemented from oomph::Problem.

149 {}

◆ actions_after_newton_solve() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_after_newton_solve ( )
inlinevirtual

Update after solve is empty.

Reimplemented from oomph::Problem.

134 {}

◆ actions_before_implicit_timestep() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_implicit_timestep ( )
inlinevirtual

Actions that should be performed before each implicit time step. This is needed when one wants to solve a steady problem before timestepping and needs to distinguish between the two cases

Reimplemented from oomph::Problem.

137  {
138  // No slip on upper boundary
139  unsigned ibound=2;
140  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
141  for (unsigned inod=0;inod<num_nod;inod++)
142  {
143  // Get exact solution
144  double y=mesh_pt()->boundary_node_pt(ibound,inod)->x(1);
145  double time=time_pt()->time();
146  double soln;
148 
149  // Assign exact solution to boundary
150  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(0,soln);
151  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(1,0.0);
152  }
153 
154  } // end of actions_before_implicit_timestep
Time *& time_pt()
Return a pointer to the global time object.
Definition: problem.h:1504
double & time()
Return the current value of continuous time.
Definition: problem.cc:11531
double & time()
Return the current value of the continuous time.
Definition: timesteppers.h:123
Scalar * y
Definition: level1_cplx_impl.h:128
void get_exact_u(const double &t, const Vector< double > &x, Vector< double > &u)
Exact solution of the problem as a vector.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:68

References ExactSoln::get_exact_u(), and y.

◆ actions_before_implicit_timestep() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_implicit_timestep ( )
inlinevirtual

Actions that should be performed before each implicit time step. This is needed when one wants to solve a steady problem before timestepping and needs to distinguish between the two cases

Reimplemented from oomph::Problem.

153  {
154  // No slip on lower boundary
155  unsigned ibound=0;
156  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
157  for (unsigned inod=0;inod<num_nod;inod++)
158  {
159  // Get exact solution
160  //double x=mesh_pt()->boundary_node_pt(ibound,inod)->x(0);
161  double time=time_pt()->time();
162  double veloc=sin(time*2.0*MathematicalConstants::Pi);
163 
164  // Assign velocity
165  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(0,veloc);
166  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(1,0.0);
167  }
168 
169  } // end of actions_before_implicit_timestep
AnnoyingScalar sin(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:137
double Pi
Definition: two_d_biharmonic.cc:235

References BiharmonicTestFunctions2::Pi, and sin().

◆ actions_before_implicit_timestep() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_implicit_timestep ( )
inlinevirtual

Actions that should be performed before each implicit time step. This is needed when one wants to solve a steady problem before timestepping and needs to distinguish between the two cases

Reimplemented from oomph::Problem.

138  {
139  // No slip on upper boundary
140  unsigned ibound=2;
141  unsigned num_nod=mesh_pt()->nboundary_node(ibound);
142  for (unsigned inod=0;inod<num_nod;inod++)
143  {
144  // Get exact solution
145  double y=mesh_pt()->boundary_node_pt(ibound,inod)->x(1);
146  double time=time_pt()->time();
147  double soln;
149 
150  // Assign exact solution to boundary
151  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(0,soln);
152  mesh_pt()->boundary_node_pt(ibound,inod)->set_value(1,0.0);
153  }
154 
155  } // end of actions_before_implicit_timestep

References ExactSoln::get_exact_u(), and y.

◆ actions_before_newton_solve() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_newton_solve ( )
inlinevirtual

Any actions that are to be performed before a complete Newton solve (e.g. adjust boundary conditions). CAREFUL: This step should (and if the FD-based LinearSolver FD_LU is used, must) only update values that are pinned!

Reimplemented from oomph::Problem.

130 {}

◆ actions_before_newton_solve() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_newton_solve ( )
inlinevirtual

Any actions that are to be performed before a complete Newton solve (e.g. adjust boundary conditions). CAREFUL: This step should (and if the FD-based LinearSolver FD_LU is used, must) only update values that are pinned!

Reimplemented from oomph::Problem.

146 {}

◆ actions_before_newton_solve() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::actions_before_newton_solve ( )
inlinevirtual

Any actions that are to be performed before a complete Newton solve (e.g. adjust boundary conditions). CAREFUL: This step should (and if the FD-based LinearSolver FD_LU is used, must) only update values that are pinned!

Reimplemented from oomph::Problem.

131 {}

◆ doc_solution() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::doc_solution ( DocInfo &  doc_info)

Doc the solution.

333 {
334  ofstream some_file;
335  char filename[100];
336 
337  // Number of plot points
338  unsigned npts=5;
339 
340  // Output solution
341  sprintf(filename,"%s/soln%i.dat",doc_info.directory().c_str(),
342  doc_info.number());
343  some_file.open(filename);
344  mesh_pt()->output(some_file,npts);
345 
346  // Write file as a tecplot text object
347  some_file << "TEXT X=2.5,Y=93.6,F=HELV,HU=POINT,C=BLUE,H=26,T=\"time = "
348  << time_pt()->time() << "\"";
349  // ...and draw a horizontal line whose length is proportional
350  // to the elapsed time
351  some_file << "GEOMETRY X=2.5,Y=98,T=LINE,C=BLUE,LT=0.4" << std::endl;
352  some_file << "1" << std::endl;
353  some_file << "2" << std::endl;
354  some_file << " 0 0" << std::endl;
355  some_file << time_pt()->time()*20.0 << " 0" << std::endl;
356 
357  some_file.close();
358 
359  // Output exact solution
360  //----------------------
361  sprintf(filename,"%s/exact_soln%i.dat",doc_info.directory().c_str(),
362  doc_info.number());
363  some_file.open(filename);
364  mesh_pt()->output_fct(some_file,npts,time_pt()->time(),
366  some_file.close();
367 
368  // Doc error
369  //----------
370  double error,norm;
371  sprintf(filename,"%s/error%i.dat",doc_info.directory().c_str(),
372  doc_info.number());
373  some_file.open(filename);
374  mesh_pt()->compute_error(some_file,
376  time_pt()->time(),
377  error,norm);
378  some_file.close();
379 
380  // Doc solution and error
381  //-----------------------
382  cout << "error: " << error << std::endl;
383  cout << "norm : " << norm << std::endl << std::endl;
384 
385  // Get time, position and exact soln at control node
386  unsigned n_control=37;
387  Vector<double> x(2), u(2);
388  double time=time_pt()->time();
389  Node* node_pt=
390  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(n_control))->node_pt(1);
391  x[0] = node_pt->x(0);
392  x[1] = node_pt->x(1);
394 
395  // Write trace file
396  Trace_file << time << " "
397  << x[0] << " "
398  << x[1] << " "
399  << node_pt->value(0) << " "
400  << node_pt->value(1) << " "
401  << u[0] << " "
402  << u[1] << " "
403  << abs(u[0]-node_pt->value(0)) << " "
404  << abs(u[1]-node_pt->value(1)) << " "
405  << error << " "
406  << norm << " "
407  << std::endl;
408 
409 
410 } // end_of_doc_solution
AnnoyingScalar abs(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:135
ofstream Trace_file
Trace file.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:178
std::string directory() const
Output directory.
Definition: oomph_utilities.h:524
unsigned & number()
Number used (e.g.) for labeling output files.
Definition: oomph_utilities.h:554
Definition: nodes.h:906
double & x(const unsigned &i)
Return the i-th nodal coordinate.
Definition: nodes.h:1060
double value(const unsigned &i) const
Definition: nodes.cc:2408
string filename
Definition: MergeRestartFiles.py:39
int error
Definition: calibrate.py:297
list x
Definition: plotDoE.py:28

References abs(), oomph::DocInfo::directory(), calibrate::error, MergeRestartFiles::filename, ExactSoln::get_exact_u(), oomph::DocInfo::number(), oomph::Problem_Parameter::Trace_file, oomph::Node::value(), plotDoE::x, and oomph::Node::x().

◆ doc_solution() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::doc_solution ( DocInfo &  doc_info)

Doc the solution.

◆ doc_solution() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::doc_solution ( DocInfo &  doc_info)

Doc the solution.

◆ fix_pressure() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure ( const unsigned &  e,
const unsigned &  pdof,
const double &  pvalue 
)
inlineprivate

Fix pressure in element e at pressure dof pdof and set to pvalue.

171  {
172  //Cast to proper element and fix pressure
173  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e))->
174  fix_pressure(pdof,pvalue);
175  }

References e().

Referenced by RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem().

◆ fix_pressure() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure ( const unsigned &  e,
const unsigned &  pdof,
const double &  pvalue 
)
inlineprivate

Fix pressure in element e at pressure dof pdof and set to pvalue.

240  {
241  //Cast to proper element and fix pressure
242  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e))->
243  fix_pressure(pdof,pvalue);
244  }

References e().

◆ fix_pressure() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::fix_pressure ( const unsigned &  e,
const unsigned &  pdof,
const double &  pvalue 
)
inlineprivate

Fix pressure in element e at pressure dof pdof and set to pvalue.

172  {
173  //Cast to proper element and fix pressure
174  dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(e))->
175  fix_pressure(pdof,pvalue);
176  }

References e().

◆ mesh_pt()

template<class ELEMENT , class TIMESTEPPER >
RefineableQuarterCircleSectorMesh<ELEMENT>* RayleighProblem< ELEMENT, TIMESTEPPER >::mesh_pt ( )
inline

Cast to specific mesh.

140  {
141  return dynamic_cast<RefineableQuarterCircleSectorMesh<ELEMENT>*>
142  (Problem::mesh_pt());
143  }

Referenced by RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem().

◆ possibly_disable_ALE()

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::possibly_disable_ALE ( )
inline

Switch off ALE terms.

205  {
206  if (Use_ALE)
207  {
208  std::cout << "Enabling ALE " << std::endl;
209  }
210  else
211 
212  {
213  std::cout << "Disabling ALE " << std::endl;
214  }
215 
216  // Loop over the elements
217  unsigned n_element = mesh_pt()->nelement();
218  for(unsigned i=0;i<n_element;i++)
219  {
220  // Upcast from FiniteElement to the present element
221  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(mesh_pt()->element_pt(i));
222 
223  // Disable/enable ALE (just to make sure both versions of the
224  // code to the same amount of setup work...)
225  if (Use_ALE)
226  {
227  el_pt->enable_ALE();
228  }
229  else
230  {
231  el_pt->disable_ALE();
232  }
233  }
234  }
int i
Definition: BiCGSTAB_step_by_step.cpp:9

References i.

Referenced by RayleighProblem< ELEMENT, TIMESTEPPER >::RayleighProblem().

◆ set_initial_condition() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::set_initial_condition
virtual

Set initial condition (incl previous timesteps) according to specified function.

Set initial condition: Assign previous and current values from exact solution.

Reimplemented from oomph::Problem.

254 {
255 
256  // Check that timestepper is from the BDF family
257  if (time_stepper_pt()->type()!="BDF")
258  {
259  std::ostringstream error_stream;
260  error_stream << "Timestepper has to be from the BDF family!\n"
261  << "You have specified a timestepper from the "
262  << time_stepper_pt()->type() << " family" << std::endl;
263 
264  throw OomphLibError(error_stream.str(),
267  }
268 
269  // Backup time in global Time object
270  double backed_up_time=time_pt()->time();
271 
272  // Past history needs to be established for t=time0-deltat, ...
273  // Then provide current values (at t=time0) which will also form
274  // the initial guess for the first solve at t=time0+deltat
275 
276  // Vector of exact solution value
277  Vector<double> soln(2);
278  Vector<double> x(2);
279 
280  //Find number of nodes in mesh
281  unsigned num_nod = mesh_pt()->nnode();
282 
283  // Set continuous times at previous timesteps:
284  // How many previous timesteps does the timestepper use?
285  int nprev_steps=time_stepper_pt()->nprev_values();
286  Vector<double> prev_time(nprev_steps+1);
287  for (int t=nprev_steps;t>=0;t--)
288  {
289  prev_time[t]=time_pt()->time(unsigned(t));
290  }
291 
292  // Loop over current & previous timesteps
293  for (int t=nprev_steps;t>=0;t--)
294  {
295  // Continuous time
296  double time=prev_time[t];
297  cout << "setting IC at time =" << time << std::endl;
298 
299  // Loop over the nodes to set initial guess everywhere
300  for (unsigned n=0;n<num_nod;n++)
301  {
302  // Get nodal coordinates
303  x[0]=mesh_pt()->node_pt(n)->x(0);
304  x[1]=mesh_pt()->node_pt(n)->x(1);
305 
306  // Get exact solution at previous time
308 
309  // Assign solution
310  mesh_pt()->node_pt(n)->set_value(t,0,soln[0]);
311  mesh_pt()->node_pt(n)->set_value(t,1,soln[1]);
312 
313  // Loop over coordinate directions: Mesh doesn't move, so
314  // previous position = present position
315  for (unsigned i=0;i<2;i++)
316  {
317  mesh_pt()->node_pt(n)->x(t,i)=x[i];
318  }
319  }
320  }
321 
322  // Reset backed up time for global timestepper
323  time_pt()->time()=backed_up_time;
324 
325 } // end of set_initial_condition
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
Definition: oomph_definitions.h:222
virtual unsigned nprev_values() const =0
Number of previous values available: 0 for static, 1 for BDF<1>,...
std::string type() const
Definition: timesteppers.h:490
type
Definition: compute_granudrum_aor.py:141
t
Definition: plotPSD.py:36
#define OOMPH_EXCEPTION_LOCATION
Definition: oomph_definitions.h:61
#define OOMPH_CURRENT_FUNCTION
Definition: oomph_definitions.h:86

References ExactSoln::get_exact_u(), i, n, OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION, plotPSD::t, compute_granudrum_aor::type, and plotDoE::x.

◆ set_initial_condition() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::set_initial_condition ( )
virtual

Set initial condition (incl previous timesteps) according to specified function.

Reimplemented from oomph::Problem.

◆ set_initial_condition() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::set_initial_condition ( )
virtual

Set initial condition (incl previous timesteps) according to specified function.

Reimplemented from oomph::Problem.

◆ unsteady_run() [1/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::unsteady_run ( DocInfo &  doc_info)

Run an unsteady simulation.

Unsteady run...

418 {
419 
420  // Open trace file
421  char filename[100];
422  sprintf(filename,"%s/trace.dat",doc_info.directory().c_str());
423  Trace_file.open(filename);
424 
425  // Write tecplot header for trace file
426  Trace_file << "time" << ", "
427  << "x" << ", "
428  << "y" << ", "
429  << "u_1" << ", "
430  << "u_2" << ", "
431  << "u_exact_1" << ", "
432  << "u_exact_2" << ", "
433  << "error_1" << ", "
434  << "error_2" << ", "
435  << "L2 error" << ", "
436  << "L2 norm" << ", " << std::endl;
437 
438  //Set value of dt
439  double dt = 0.025;
440 
442  {
443  // Initialise all history values for an impulsive start
445  cout << "IC = impulsive start" << std::endl;
446  }
447  else
448  {
449  // Initialise timestep
450  initialise_dt(dt);
451  // Set initial conditions.
453  cout << "IC = exact solution" << std::endl;
454  }
455 
456  //Now do many timesteps
457  unsigned ntsteps=80;
458 
459  // If validation run only do 5 timesteps
461  {
462  ntsteps=5;
463  cout << "validation run" << std::endl;
464  }
465 
466  // Doc initial condition
467  doc_solution(doc_info);
468 
469  // increment counter
470  doc_info.number()++;
471 
472  //Loop over the timesteps
473  for(unsigned t=1;t<=ntsteps;t++)
474  {
475  cout << "TIMESTEP " << t << std::endl;
476 
477  //Take one fixed timestep
479 
480  //Output the time
481  cout << "Time is now " << time_pt()->time() << std::endl;
482 
483  // Doc solution
484  doc_solution(doc_info);
485 
486  // increment counter
487  doc_info.number()++;
488  }
489 
490 } // end of unsteady run
void set_initial_condition()
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:253
void doc_solution(DocInfo &doc_info)
Doc the solution.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:332
void initialise_dt(const double &dt)
Definition: problem.cc:13231
void assign_initial_values_impulsive()
Definition: problem.cc:11499
void unsteady_newton_solve(const double &dt)
Definition: problem.cc:10953
unsigned Long_run_flag
Flag for long/short run: Default = perform long run.
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:52
unsigned Impulsive_start_flag
Definition: navier_stokes/rayleigh_channel/rayleigh_channel.cc:56

References oomph::DocInfo::directory(), MergeRestartFiles::filename, Global_Parameters::Impulsive_start_flag, Global_Parameters::Long_run_flag, oomph::DocInfo::number(), plotPSD::t, and oomph::Problem_Parameter::Trace_file.

◆ unsteady_run() [2/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::unsteady_run ( DocInfo &  doc_info)

Run an unsteady simulation.

◆ unsteady_run() [3/3]

template<class ELEMENT , class TIMESTEPPER >
void RayleighProblem< ELEMENT, TIMESTEPPER >::unsteady_run ( DocInfo &  doc_info)

Run an unsteady simulation.

Member Data Documentation

◆ Trace_file

template<class ELEMENT , class TIMESTEPPER >
ofstream RayleighProblem< ELEMENT, TIMESTEPPER >::Trace_file
private

Trace file.

◆ Use_ALE

template<class ELEMENT , class TIMESTEPPER >
bool RayleighProblem< ELEMENT, TIMESTEPPER >::Use_ALE
private

Trace file.

Flag for ALE.

Flag for ALE


The documentation for this class was generated from the following files: