time_harmonic_fourier_decomposed_linear_elasticity_elements.h

Go to the documentation of this file.

// LIC// ====================================================================
// LIC// This file forms part of oomph-lib, the object-oriented,
// LIC// multi-physics finite-element library, available
// LIC// at http://www.oomph-lib.org.
// LIC//
// LIC// Copyright (C) 2006-2022 Matthias Heil and Andrew Hazel
// LIC//
// LIC// This library is free software; you can redistribute it and/or
// LIC// modify it under the terms of the GNU Lesser General Public
// LIC// License as published by the Free Software Foundation; either
// LIC// version 2.1 of the License, or (at your option) any later version.
// LIC//
// LIC// This library is distributed in the hope that it will be useful,
// LIC// but WITHOUT ANY WARRANTY; without even the implied warranty of
// LIC// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
// LIC// Lesser General Public License for more details.
// LIC//
// LIC// You should have received a copy of the GNU Lesser General Public
// LIC// License along with this library; if not, write to the Free Software
// LIC// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
// LIC// 02110-1301  USA.
// LIC//
// LIC// The authors may be contacted at oomph-lib@maths.man.ac.uk.
// LIC//
// LIC//====================================================================
 
// Include guards to prevent multiple inclusion of the header
#ifndef OOMPH_FOURIER_DECOMPOSED_TIME_HARMONIC_LINEAR_ELASTICITY_ELEMENTS_HEADER
#define OOMPH_FOURIER_DECOMPOSED_TIME_HARMONIC_LINEAR_ELASTICITY_ELEMENTS_HEADER
 
// Config header generated by autoconfig
#ifdef HAVE_CONFIG_H
#include <oomph-lib-config.h>
#endif
 
 
#ifdef OOMPH_HAS_MPI
#include "mpi.h"
#endif
 
#include <complex>
 
 
// OOMPH-LIB headers
#include "../generic/Qelements.h"
#include "../generic/Telements.h"
#include "../generic/projection.h"
#include "../generic/error_estimator.h"
 
 
namespace oomph
{
  //=======================================================================
  //=======================================================================
  class TimeHarmonicFourierDecomposedLinearElasticityEquationsBase
    : public virtual FiniteElement
  {
  public:
    virtual inline std::complex<unsigned> u_index_time_harmonic_fourier_decomposed_linear_elasticity(
      const unsigned i) const
    {
      return std::complex<unsigned>(i, i + 3);
    }
 
    void interpolated_u_time_harmonic_fourier_decomposed_linear_elasticity(
      const Vector<double>& s, Vector<std::complex<double>>& disp) const
    {
      // Find number of nodes
      unsigned n_node = nnode();
 
      // Local shape function
      Shape psi(n_node);
 
      // Find values of shape function
      shape(s, psi);
 
      for (unsigned i = 0; i < 3; i++)
      {
        // Index at which the nodal value is stored
        std::complex<unsigned> u_nodal_index =
          u_index_time_harmonic_fourier_decomposed_linear_elasticity(i);
 
        // Initialise value of u
        disp[i] = std::complex<double>(0.0, 0.0);
 
        // Loop over the local nodes and sum
        for (unsigned l = 0; l < n_node; l++)
        {
          const std::complex<double> u_value(
            nodal_value(l, u_nodal_index.real()),
            nodal_value(l, u_nodal_index.imag()));
 
          disp[i] += u_value * psi[l];
        }
      }
    }
 
    std::complex<double> interpolated_u_time_harmonic_fourier_decomposed_linear_elasticity(
      const Vector<double>& s, const unsigned& i) const
    {
      // Find number of nodes
      unsigned n_node = nnode();
 
      // Local shape function
      Shape psi(n_node);
 
      // Find values of shape function
      shape(s, psi);
 
      // Get nodal index at which i-th velocity is stored
      std::complex<unsigned> u_nodal_index =
        u_index_time_harmonic_fourier_decomposed_linear_elasticity(i);
 
      // Initialise value of u
      std::complex<double> interpolated_u(0.0, 0.0);
 
      // Loop over the local nodes and sum
      for (unsigned l = 0; l < n_node; l++)
      {
        const std::complex<double> u_value(
          nodal_value(l, u_nodal_index.real()),
          nodal_value(l, u_nodal_index.imag()));
 
        interpolated_u += u_value * psi[l];
      }
 
      return (interpolated_u);
    }
 
 
    typedef void (*BodyForceFctPt)(const Vector<double>& x,
                                   Vector<std::complex<double>>& b);
 
    TimeHarmonicFourierDecomposedLinearElasticityEquationsBase()
      : Omega_sq_pt(&Default_omega_sq_value),
        Youngs_modulus_pt(&Default_youngs_modulus_value),
        Nu_pt(0),
        Fourier_wavenumber_pt(0),
        Body_force_fct_pt(0)
    {
    }
 
    const std::complex<double>& omega_sq() const
    {
      return *Omega_sq_pt;
    }
 
    std::complex<double>*& omega_sq_pt()
    {
      return Omega_sq_pt;
    }
 
    std::complex<double>*& youngs_modulus_pt()
    {
      return Youngs_modulus_pt;
    }
 
    inline std::complex<double> youngs_modulus() const
    {
      return (*Youngs_modulus_pt);
    }
 
    std::complex<double>& nu() const
    {
#ifdef PARANOID
      if (Nu_pt == 0)
      {
        std::ostringstream error_message;
        error_message << "No pointer to Poisson's ratio set. Please set one!\n";
        throw OomphLibError(error_message.str(),
                            OOMPH_CURRENT_FUNCTION,
                            OOMPH_EXCEPTION_LOCATION);
      }
#endif
      return *Nu_pt;
    }
 
    std::complex<double>*& nu_pt()
    {
      return Nu_pt;
    }
 
    int& fourier_wavenumber() const
    {
#ifdef PARANOID
      if (Fourier_wavenumber_pt == 0)
      {
        std::ostringstream error_message;
        error_message
          << "No pointer to Fourier wavenumber set. Please set one!\n";
        throw OomphLibError(error_message.str(),
                            OOMPH_CURRENT_FUNCTION,
                            OOMPH_EXCEPTION_LOCATION);
      }
#endif
      return *Fourier_wavenumber_pt;
    }
 
    int*& fourier_wavenumber_pt()
    {
      return Fourier_wavenumber_pt;
    }
 
    BodyForceFctPt& body_force_fct_pt()
    {
      return Body_force_fct_pt;
    }
 
    BodyForceFctPt body_force_fct_pt() const
    {
      return Body_force_fct_pt;
    }
 
    inline void body_force(const Vector<double>& x,
                           Vector<std::complex<double>>& b) const
    {
      // If no function has been set, return zero vector
      if (Body_force_fct_pt == 0)
      {
        // Get spatial dimension of element
        unsigned n = dim();
        for (unsigned i = 0; i < n; i++)
        {
          b[i] = std::complex<double>(0.0, 0.0);
        }
      }
      else
      {
        (*Body_force_fct_pt)(x, b);
      }
    }
 
    unsigned ndof_types() const
    {
      return 1;
    }
 
    void get_dof_numbers_for_unknowns(
      std::list<std::pair<unsigned long, unsigned>>& dof_lookup_list) const
    {
      // temporary pair (used to store dof lookup prior to being added
      // to list)
      std::pair<unsigned long, unsigned> dof_lookup;
 
      // number of nodes
      const unsigned n_node = this->nnode();
 
      // Integer storage for local unknown
      int local_unknown = 0;
 
      // Loop over the nodes
      for (unsigned n = 0; n < n_node; n++)
      {
        // Loop over dimension (real and imag displacement components)
        for (unsigned i = 0; i < 6; i++)
        {
          // If the variable is free
          local_unknown = nodal_local_eqn(n, i);
 
          // ignore pinned values
          if (local_unknown >= 0)
          {
            // store dof lookup in temporary pair: First entry in pair
            // is global equation number; second entry is DOF type
            dof_lookup.first = this->eqn_number(local_unknown);
            dof_lookup.second = 0;
 
            // add to list
            dof_lookup_list.push_front(dof_lookup);
          }
        }
      }
    }
 
 
  protected:
    std::complex<double>* Omega_sq_pt;
 
    std::complex<double>* Youngs_modulus_pt;
 
    std::complex<double>* Nu_pt;
 
    int* Fourier_wavenumber_pt;
 
    BodyForceFctPt Body_force_fct_pt;
 
    static std::complex<double> Default_omega_sq_value;
 
    static std::complex<double> Default_youngs_modulus_value;
  };
 
 
 
 
  //=======================================================================
  //=======================================================================
  class TimeHarmonicFourierDecomposedLinearElasticityEquations
    : public TimeHarmonicFourierDecomposedLinearElasticityEquationsBase
  {
  public:
    TimeHarmonicFourierDecomposedLinearElasticityEquations() {}
 
    unsigned required_nvalue(const unsigned& n) const
    {
      return 6;
    }
 
    void fill_in_contribution_to_residuals(Vector<double>& residuals)
    {
      fill_in_generic_contribution_to_residuals_fourier_decomp_time_harmonic_linear_elasticity(
        residuals, GeneralisedElement::Dummy_matrix, 0);
    }
 
 
    void fill_in_contribution_to_jacobian(Vector<double>& residuals,
                                          DenseMatrix<double>& jacobian)
    {
      // Add the contribution to the residuals
      this
        ->fill_in_generic_contribution_to_residuals_fourier_decomp_time_harmonic_linear_elasticity(
          residuals, jacobian, 1);
    }
 
 
    void get_strain(const Vector<double>& s,
                    DenseMatrix<std::complex<double>>& strain);
 
    void compute_norm(double& norm);
 
    void output_fct(std::ostream& outfile,
                    const unsigned& nplot,
                    FiniteElement::SteadyExactSolutionFctPt exact_soln_pt);
 
    void output(std::ostream& outfile)
    {
      unsigned n_plot = 5;
      output(outfile, n_plot);
    }
 
    void output(std::ostream& outfile, const unsigned& n_plot);
 
    void output(FILE* file_pt)
    {
      unsigned n_plot = 5;
      output(file_pt, n_plot);
    }
 
    void output(FILE* file_pt, const unsigned& n_plot);
 
    void compute_error(std::ostream& outfile,
                       FiniteElement::SteadyExactSolutionFctPt exact_soln_pt,
                       double& error,
                       double& norm);
 
 
  private:
    virtual void fill_in_generic_contribution_to_residuals_fourier_decomp_time_harmonic_linear_elasticity(
      Vector<double>& residuals, DenseMatrix<double>& jacobian, unsigned flag);
  };
 
 
 
 
  //===========================================================================
  //============================================================================
  template<unsigned NNODE_1D>
  class QTimeHarmonicFourierDecomposedLinearElasticityElement
    : public virtual QElement<2, NNODE_1D>,
      public virtual TimeHarmonicFourierDecomposedLinearElasticityEquations
  {
  public:
    QTimeHarmonicFourierDecomposedLinearElasticityElement()
      : QElement<2, NNODE_1D>(),
        TimeHarmonicFourierDecomposedLinearElasticityEquations()
    {
    }
 
    void output(std::ostream& outfile)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(outfile);
    }
 
    void output(std::ostream& outfile, const unsigned& n_plot)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(outfile,
                                                                     n_plot);
    }
 
 
    void output(FILE* file_pt)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(file_pt);
    }
 
    void output(FILE* file_pt, const unsigned& n_plot)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(file_pt,
                                                                     n_plot);
    }
  };
 
 
  //============================================================================
  //============================================================================
  template<unsigned NNODE_1D>
  class FaceGeometry<
    QTimeHarmonicFourierDecomposedLinearElasticityElement<NNODE_1D>>
    : public virtual QElement<1, NNODE_1D>
  {
  public:
    FaceGeometry() : QElement<1, NNODE_1D>() {}
  };
 
 
 
 
  //===========================================================================
  //============================================================================
  template<unsigned NNODE_1D>
  class TTimeHarmonicFourierDecomposedLinearElasticityElement
    : public virtual TElement<2, NNODE_1D>,
      public virtual TimeHarmonicFourierDecomposedLinearElasticityEquations,
      public virtual ElementWithZ2ErrorEstimator
  {
  public:
    TTimeHarmonicFourierDecomposedLinearElasticityElement()
      : TElement<2, NNODE_1D>(),
        TimeHarmonicFourierDecomposedLinearElasticityEquations()
    {
    }
 
    void output(std::ostream& outfile)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(outfile);
    }
 
    void output(std::ostream& outfile, const unsigned& n_plot)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(outfile,
                                                                     n_plot);
    }
 
    void output(FILE* file_pt)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(file_pt);
    }
 
    void output(FILE* file_pt, const unsigned& n_plot)
    {
      TimeHarmonicFourierDecomposedLinearElasticityEquations::output(file_pt,
                                                                     n_plot);
    }
 
 
    unsigned nvertex_node() const
    {
      return TElement<2, NNODE_1D>::nvertex_node();
    }
 
    Node* vertex_node_pt(const unsigned& j) const
    {
      return TElement<2, NNODE_1D>::vertex_node_pt(j);
    }
 
    unsigned nrecovery_order()
    {
      return NNODE_1D - 1;
    }
 
    unsigned num_Z2_flux_terms()
    {
      // 3 Diagonal strain rates and 3 off diagonal terms for real and imag part
      return 12;
    }
 
    void get_Z2_flux(const Vector<double>& s, Vector<double>& flux)
    {
#ifdef PARANOID
      unsigned num_entries = 12;
      if (flux.size() != num_entries)
      {
        std::ostringstream error_message;
        error_message << "The flux vector has the wrong number of entries, "
                      << flux.size() << ", whereas it should be " << num_entries
                      << std::endl;
        throw OomphLibError(error_message.str(),
                            OOMPH_CURRENT_FUNCTION,
                            OOMPH_EXCEPTION_LOCATION);
      }
#endif
 
      // Get strain matrix
      DenseMatrix<std::complex<double>> strain(3);
      this->get_strain(s, strain);
 
      // Pack into flux Vector
      unsigned icount = 0;
 
      // Start with diagonal terms
      for (unsigned i = 0; i < 3; i++)
      {
        flux[icount] = strain(i, i).real();
        icount++;
        flux[icount] = strain(i, i).imag();
        icount++;
      }
 
      // Off diagonals row by row
      for (unsigned i = 0; i < 3; i++)
      {
        for (unsigned j = i + 1; j < 3; j++)
        {
          flux[icount] = strain(i, j).real();
          icount++;
          flux[icount] = strain(i, j).imag();
          icount++;
        }
      }
    }
  };
 
 
  //============================================================================
  //============================================================================
  template<unsigned NNODE_1D>
  class FaceGeometry<
    TTimeHarmonicFourierDecomposedLinearElasticityElement<NNODE_1D>>
    : public virtual TElement<1, NNODE_1D>
  {
  public:
    FaceGeometry() : TElement<1, NNODE_1D>() {}
  };
 
 
 
 
  //==========================================================
  //==========================================================
  template<class TIME_HARMONIC_LINEAR_ELAST_ELEMENT>
  class ProjectableTimeHarmonicFourierDecomposedLinearElasticityElement
    : public virtual ProjectableElement<TIME_HARMONIC_LINEAR_ELAST_ELEMENT>
  {
  public:
    ProjectableTimeHarmonicFourierDecomposedLinearElasticityElement() {}
 
    Vector<std::pair<Data*, unsigned>> data_values_of_field(const unsigned& fld)
    {
      // Create the vector
      Vector<std::pair<Data*, unsigned>> data_values;
 
      // Loop over all nodes and extract the fld-th nodal value
      unsigned nnod = this->nnode();
      for (unsigned j = 0; j < nnod; j++)
      {
        // Add the data value associated with the velocity components
        data_values.push_back(std::make_pair(this->node_pt(j), fld));
      }
 
      // Return the vector
      return data_values;
    }
 
    unsigned nfields_for_projection()
    {
      return 3 * this->dim();
    }
 
    unsigned nhistory_values_for_projection(const unsigned& fld)
    {
#ifdef PARANOID
      if (fld > 5)
      {
        std::stringstream error_stream;
        error_stream << "Elements only store six fields so fld can't be"
                     << " " << fld << std::endl;
        throw OomphLibError(
          error_stream.str(), OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION);
      }
#endif
      return this->node_pt(0)->ntstorage();
    }
 
    unsigned nhistory_values_for_coordinate_projection()
    {
      return this->node_pt(0)->position_time_stepper_pt()->ntstorage();
    }
 
    double jacobian_and_shape_of_field(const unsigned& fld,
                                       const Vector<double>& s,
                                       Shape& psi)
    {
      unsigned n_dim = this->dim();
      unsigned n_node = this->nnode();
      DShape dpsidx(n_node, n_dim);
 
      // Call the derivatives of the shape functions and return
      // the Jacobian
      return this->dshape_eulerian(s, psi, dpsidx);
    }
 
 
    double get_field(const unsigned& t,
                     const unsigned& fld,
                     const Vector<double>& s)
    {
      unsigned n_node = this->nnode();
 
#ifdef PARANOID
      unsigned n_dim = this->node_pt(0)->ndim();
#endif
 
      // Local shape function
      Shape psi(n_node);
 
      // Find values of shape function
      this->shape(s, psi);
 
      // Initialise value of u
      double interpolated_u = 0.0;
 
      // Sum over the local nodes at that time
      for (unsigned l = 0; l < n_node; l++)
      {
#ifdef PARANOID
        unsigned nvalue = this->node_pt(l)->nvalue();
        if (nvalue != 3 * n_dim)
        {
          std::stringstream error_stream;
          error_stream
            << "Current implementation only works for non-resized nodes\n"
            << "but nvalue= " << nvalue << "!= 3 dim = " << 3 * n_dim
            << std::endl;
          throw OomphLibError(error_stream.str(),
                              OOMPH_CURRENT_FUNCTION,
                              OOMPH_EXCEPTION_LOCATION);
        }
#endif
        interpolated_u += this->nodal_value(t, l, fld) * psi[l];
      }
      return interpolated_u;
    }
 
 
    unsigned nvalue_of_field(const unsigned& fld)
    {
      return this->nnode();
    }
 
 
    int local_equation(const unsigned& fld, const unsigned& j)
    {
#ifdef PARANOID
      unsigned n_dim = this->node_pt(0)->ndim();
      unsigned nvalue = this->node_pt(j)->nvalue();
      if (nvalue != 3 * n_dim)
      {
        std::stringstream error_stream;
        error_stream
          << "Current implementation only works for non-resized nodes\n"
          << "but nvalue= " << nvalue << "!= 3 dim = " << 3 * n_dim
          << std::endl;
        throw OomphLibError(
          error_stream.str(), OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION);
      }
#endif
      return this->nodal_local_eqn(j, fld);
    }
  };
 
 
  //=======================================================================
  //=======================================================================
  template<class ELEMENT>
  class FaceGeometry<
    ProjectableTimeHarmonicFourierDecomposedLinearElasticityElement<ELEMENT>>
    : public virtual FaceGeometry<ELEMENT>
  {
  public:
    FaceGeometry() : FaceGeometry<ELEMENT>() {}
  };
 
 
  //=======================================================================
  //=======================================================================
  template<class ELEMENT>
  class FaceGeometry<FaceGeometry<
    ProjectableTimeHarmonicFourierDecomposedLinearElasticityElement<ELEMENT>>>
    : public virtual FaceGeometry<FaceGeometry<ELEMENT>>
  {
  public:
    FaceGeometry() : FaceGeometry<FaceGeometry<ELEMENT>>() {}
  };
 
 
} // namespace oomph
 
 
#endif