oomph::TPVDElementWithContinuousPressure< DIM > Class Template Reference

#include <solid_elements.h>

+ Inheritance diagram for oomph::TPVDElementWithContinuousPressure< DIM >:

Public Member Functions

 TPVDElementWithContinuousPressure ()
 Constructor. More...
 
 TPVDElementWithContinuousPressure (const TPVDElementWithContinuousPressure< DIM > &dummy)=delete
 Broken copy constructor. More...
 
int solid_p_nodal_index () const
 Broken assignment operator. More...
 
virtual unsigned required_nvalue (const unsigned &n) const
 
double solid_p (const unsigned &l)
 
void set_solid_p (const unsigned &l, const double &p_value)
 Set the l-th solid pressure value to p_value. More...
 
unsigned npres_solid () const
 Return number of pressure values. More...
 
void fix_solid_pressure (const unsigned &l, const double &pvalue)
 Fix the pressure dof l to be the value pvalue. More...
 
void output (std::ostream &outfile)
 Generic FiniteElement output function. More...
 
void output (std::ostream &outfile, const unsigned &n_plot)
 PVDEquationsWithPressure output function. More...
 
void output (FILE *file_pt)
 C-style generic FiniteElement output function. More...
 
void output (FILE *file_pt, const unsigned &n_plot)
 C-style PVDEquationsWithPressure output function. More...
 
unsigned nrecovery_order ()
 
unsigned nvertex_node () const
 Number of vertex nodes in the element. More...
 
Nodevertex_node_pt (const unsigned &j) const
 Pointer to the j-th vertex node in the element. More...
 
unsigned num_Z2_flux_terms ()
 Number of 'flux' terms for Z2 error estimation. More...
 
void get_Z2_flux (const Vector< double > &s, Vector< double > &flux)
 
unsigned npres_solid () const
 
unsigned npres_solid () const
 
- Public Member Functions inherited from oomph::PVDEquationsWithPressure< DIM >
 PVDEquationsWithPressure ()
 Constructor, by default the element is NOT incompressible. More...
 
void get_stress (const Vector< double > &s, DenseMatrix< double > &sigma)
 
bool is_incompressible () const
 Return whether the material is incompressible. More...
 
void set_incompressible ()
 Set the material to be incompressible. More...
 
void set_compressible ()
 Set the material to be compressible. More...
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Fill in the residuals. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
double interpolated_solid_p (const Vector< double > &s)
 Return the interpolated_solid_pressure. More...
 
void extended_output (std::ostream &outfile, const unsigned &n_plot)
 Output: x,y,[z],xi0,xi1,[xi2],gamma strain and stress components. More...
 
void get_mass_matrix_diagonal (Vector< double > &mass_diag)
 
unsigned ndof_types () const
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const
 
- Public Member Functions inherited from oomph::PVDEquationsBase< DIM >
 PVDEquationsBase ()
 
ConstitutiveLaw *& constitutive_law_pt ()
 Return the constitutive law pointer. More...
 
const doublelambda_sq () const
 Access function for timescale ratio (nondim density) More...
 
double *& lambda_sq_pt ()
 Access function for pointer to timescale ratio (nondim density) More...
 
IsotropicGrowthFctPtisotropic_growth_fct_pt ()
 Access function: Pointer to isotropic growth function. More...
 
PrestressFctPtprestress_fct_pt ()
 Access function: Pointer to pre-stress function. More...
 
IsotropicGrowthFctPt isotropic_growth_fct_pt () const
 Access function: Pointer to isotropic growth function (const version) More...
 
BodyForceFctPtbody_force_fct_pt ()
 Access function: Pointer to body force function. More...
 
BodyForceFctPt body_force_fct_pt () const
 Access function: Pointer to body force function (const version) More...
 
void enable_inertia ()
 Switch on solid inertia. More...
 
void disable_inertia ()
 Switch off solid inertia. More...
 
bool is_inertia_enabled () const
 Access function to flag that switches inertia on/off (const version) More...
 
virtual void pin_elemental_redundant_nodal_solid_pressures ()
 Pin the element's redundant solid pressures (needed for refinement) More...
 
void get_strain (const Vector< double > &s, DenseMatrix< double > &strain) const
 Return the strain tensor. More...
 
void get_energy (double &pot_en, double &kin_en)
 Get potential (strain) and kinetic energy. More...
 
void get_deformed_covariant_basis_vectors (const Vector< double > &s, DenseMatrix< double > &def_covariant_basis)
 
void get_principal_stress (const Vector< double > &s, DenseMatrix< double > &principal_stress_vector, Vector< double > &principal_stress)
 
virtual void get_isotropic_growth (const unsigned &ipt, const Vector< double > &s, const Vector< double > &xi, double &gamma) const
 
void body_force (const Vector< double > &xi, Vector< double > &b) const
 
void enable_evaluate_jacobian_by_fd ()
 Set Jacobian to be evaluated by FD? Else: Analytically. More...
 
void disable_evaluate_jacobian_by_fd ()
 Set Jacobian to be evaluated analytically Else: by FD. More...
 
bool is_jacobian_evaluated_by_fd () const
 Return the flag indicating whether the jacobian is evaluated by fd. More...
 
double prestress (const unsigned &i, const unsigned &j, const Vector< double > xi)
 
- Public Member Functions inherited from oomph::SolidFiniteElement
void set_lagrangian_dimension (const unsigned &lagrangian_dimension)
 
virtual bool has_internal_solid_data ()
 
 SolidFiniteElement ()
 Constructor: Set defaults. More...
 
virtual ~SolidFiniteElement ()
 Destructor to clean up any allocated memory. More...
 
 SolidFiniteElement (const SolidFiniteElement &)=delete
 Broken copy constructor. More...
 
unsigned ngeom_data () const
 Broken assignment operator. More...
 
Datageom_data_pt (const unsigned &j)
 
void identify_geometric_data (std::set< Data * > &geometric_data_pt)
 
double zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const
 
virtual void get_x_and_xi (const Vector< double > &s, Vector< double > &x_fe, Vector< double > &x, Vector< double > &xi_fe, Vector< double > &xi) const
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt)
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt, MacroElement *undeformed_macro_elem_pt)
 
void set_undeformed_macro_elem_pt (MacroElement *undeformed_macro_elem_pt)
 
MacroElementundeformed_macro_elem_pt ()
 Access function to pointer to "undeformed" macro element. More...
 
double dshape_lagrangian (const Vector< double > &s, Shape &psi, DShape &dpsidxi) const
 
virtual double dshape_lagrangian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidxi) const
 
double d2shape_lagrangian (const Vector< double > &s, Shape &psi, DShape &dpsidxi, DShape &d2psidxi) const
 
virtual double d2shape_lagrangian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidxi, DShape &d2psidxi) const
 
unsigned lagrangian_dimension () const
 
unsigned nnodal_lagrangian_type () const
 
Nodeconstruct_node (const unsigned &n)
 Construct the local node n and return a pointer to it. More...
 
Nodeconstruct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
Nodeconstruct_boundary_node (const unsigned &n)
 
Nodeconstruct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
virtual void assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)
 
void describe_local_dofs (std::ostream &out, const std::string &current_string) const
 
double raw_lagrangian_position (const unsigned &n, const unsigned &i) const
 
double raw_lagrangian_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double lagrangian_position (const unsigned &n, const unsigned &i) const
 Return i-th Lagrangian coordinate at local node n. More...
 
double lagrangian_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
virtual double interpolated_xi (const Vector< double > &s, const unsigned &i) const
 
virtual void interpolated_xi (const Vector< double > &s, Vector< double > &xi) const
 
virtual void interpolated_dxids (const Vector< double > &s, DenseMatrix< double > &dxids) const
 
virtual void J_lagrangian (const Vector< double > &s) const
 
virtual double J_lagrangian_at_knot (const unsigned &ipt) const
 
SolidInitialCondition *& solid_ic_pt ()
 Pointer to object that describes the initial condition. More...
 
void enable_solve_for_consistent_newmark_accel ()
 
void disable_solve_for_consistent_newmark_accel ()
 Set to reset the problem being solved to be the standard problem. More...
 
MultiplierFctPtmultiplier_fct_pt ()
 
MultiplierFctPt multiplier_fct_pt () const
 
virtual void get_residuals_for_solid_ic (Vector< double > &residuals)
 
void fill_in_residuals_for_solid_ic (Vector< double > &residuals)
 
void fill_in_jacobian_for_solid_ic (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_for_newmark_accel (DenseMatrix< double > &jacobian)
 
void compute_norm (double &el_norm)
 
int position_local_eqn (const unsigned &n, const unsigned &k, const unsigned &j) const
 
- Public Member Functions inherited from oomph::FiniteElement
void set_dimension (const unsigned &dim)
 
void set_nodal_dimension (const unsigned &nodal_dim)
 
void set_nnodal_position_type (const unsigned &nposition_type)
 Set the number of types required to interpolate the coordinate. More...
 
void set_n_node (const unsigned &n)
 
int nodal_local_eqn (const unsigned &n, const unsigned &i) const
 
double dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const
 
 FiniteElement ()
 Constructor. More...
 
virtual ~FiniteElement ()
 
 FiniteElement (const FiniteElement &)=delete
 Broken copy constructor. More...
 
virtual bool local_coord_is_valid (const Vector< double > &s)
 Broken assignment operator. More...
 
virtual void move_local_coord_back_into_element (Vector< double > &s) const
 
void get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const
 
virtual void local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
 
virtual void local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
 
virtual double local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)
 
MacroElementmacro_elem_pt ()
 Access function to pointer to macro element. More...
 
void get_x (const Vector< double > &s, Vector< double > &x) const
 
void get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const
 
virtual void get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void set_integration_scheme (Integral *const &integral_pt)
 Set the spatial integration scheme. More...
 
Integral *const & integral_pt () const
 Return the pointer to the integration scheme (const version) More...
 
virtual void shape (const Vector< double > &s, Shape &psi) const =0
 
virtual void shape_at_knot (const unsigned &ipt, Shape &psi) const
 
virtual void dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
 
virtual void dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const
 
virtual void d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual void d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual double J_eulerian (const Vector< double > &s) const
 
virtual double J_eulerian_at_knot (const unsigned &ipt) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
void check_jacobian (const double &jacobian) const
 
double dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const
 
double d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual double d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual void assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const
 
Node *& node_pt (const unsigned &n)
 Return a pointer to the local node n. More...
 
Node *const & node_pt (const unsigned &n) const
 Return a pointer to the local node n (const version) More...
 
unsigned nnode () const
 Return the number of nodes. More...
 
virtual unsigned nnode_1d () const
 
double raw_nodal_position (const unsigned &n, const unsigned &i) const
 
double raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position (const unsigned &n, const unsigned &i) const
 
double nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double dnodal_position_dt (const unsigned &n, const unsigned &i) const
 Return the i-th component of nodal velocity: dx/dt at local node n. More...
 
double dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
virtual void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
virtual void disable_ALE ()
 
virtual void enable_ALE ()
 
unsigned nnodal_position_type () const
 
bool has_hanging_nodes () const
 
unsigned nodal_dimension () const
 Return the required Eulerian dimension of the nodes in this element. More...
 
int get_node_number (Node *const &node_pt) const
 
virtual Nodeget_node_at_local_coordinate (const Vector< double > &s) const
 
double raw_nodal_value (const unsigned &n, const unsigned &i) const
 
double raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
unsigned dim () const
 
virtual ElementGeometry::ElementGeometry element_geometry () const
 Return the geometry type of the element (either Q or T usually). More...
 
virtual double interpolated_x (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated coordinate x[i] at local coordinate s. More...
 
virtual double interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual void interpolated_x (const Vector< double > &s, Vector< double > &x) const
 Return FE interpolated position x[] at local coordinate s as Vector. More...
 
virtual void interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const
 
virtual double interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)
 
virtual void interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)
 
void position (const Vector< double > &zeta, Vector< double > &r) const
 
void position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const
 
void dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)
 
void interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const
 
void locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)
 
virtual void node_update ()
 
virtual void identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)
 
virtual double s_min () const
 Min value of local coordinate. More...
 
virtual double s_max () const
 Max. value of local coordinate. More...
 
double size () const
 
virtual double compute_physical_size () const
 
virtual void point_output_data (const Vector< double > &s, Vector< double > &data)
 
void point_output (std::ostream &outfile, const Vector< double > &s)
 
virtual unsigned nplot_points_paraview (const unsigned &nplot) const
 
virtual unsigned nsub_elements_paraview (const unsigned &nplot) const
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const
 
virtual void write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const
 
virtual unsigned nscalar_paraview () const
 
virtual void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
virtual std::string scalar_name_paraview (const unsigned &i) const
 
virtual void output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 Output an exact solution over the element. More...
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 Output a time-dependent exact solution over the element. More...
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
 Output a time-dependent exact solution over the element. More...
 
virtual void get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
 
virtual std::string tecplot_zone_string (const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const
 
virtual unsigned nplot_points (const unsigned &nplot) const
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)
 
void integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
 Integrate Vector-valued function over element. More...
 
void integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
 Integrate Vector-valued time-dep function over element. More...
 
virtual void build_face_element (const int &face_index, FaceElement *face_element_pt)
 
virtual unsigned self_test ()
 
virtual unsigned get_bulk_node_number (const int &face_index, const unsigned &i) const
 
virtual int face_outer_unit_normal_sign (const int &face_index) const
 Get the sign of the outer unit normal on the face given by face_index. More...
 
virtual unsigned nnode_on_face () const
 
void face_node_number_error_check (const unsigned &i) const
 Range check for face node numbers. More...
 
virtual CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt (const int &face_index) const
 
virtual BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt (const int &face_index) const
 
- Public Member Functions inherited from oomph::GeneralisedElement
 GeneralisedElement ()
 Constructor: Initialise all pointers and all values to zero. More...
 
virtual ~GeneralisedElement ()
 Virtual destructor to clean up any memory allocated by the object. More...
 
 GeneralisedElement (const GeneralisedElement &)=delete
 Broken copy constructor. More...
 
void operator= (const GeneralisedElement &)=delete
 Broken assignment operator. More...
 
Data *& internal_data_pt (const unsigned &i)
 Return a pointer to i-th internal data object. More...
 
Data *const & internal_data_pt (const unsigned &i) const
 Return a pointer to i-th internal data object (const version) More...
 
Data *& external_data_pt (const unsigned &i)
 Return a pointer to i-th external data object. More...
 
Data *const & external_data_pt (const unsigned &i) const
 Return a pointer to i-th external data object (const version) More...
 
unsigned long eqn_number (const unsigned &ieqn_local) const
 
int local_eqn_number (const unsigned long &ieqn_global) const
 
unsigned add_external_data (Data *const &data_pt, const bool &fd=true)
 
bool external_data_fd (const unsigned &i) const
 
void exclude_external_data_fd (const unsigned &i)
 
void include_external_data_fd (const unsigned &i)
 
void flush_external_data ()
 Flush all external data. More...
 
void flush_external_data (Data *const &data_pt)
 Flush the object addressed by data_pt from the external data array. More...
 
unsigned ninternal_data () const
 Return the number of internal data objects. More...
 
unsigned nexternal_data () const
 Return the number of external data objects. More...
 
unsigned ndof () const
 Return the number of equations/dofs in the element. More...
 
void dof_vector (const unsigned &t, Vector< double > &dof)
 Return the vector of dof values at time level t. More...
 
void dof_pt_vector (Vector< double * > &dof_pt)
 Return the vector of pointers to dof values. More...
 
void set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)
 
virtual void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void complete_setup_of_dependencies ()
 
virtual void get_residuals (Vector< double > &residuals)
 
virtual void get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
virtual void get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
virtual void get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
virtual void compute_norm (Vector< double > &norm)
 
- Public Member Functions inherited from oomph::GeomObject
 GeomObject ()
 Default constructor. More...
 
 GeomObject (const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)
 
 GeomObject (const GeomObject &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const GeomObject &)=delete
 Broken assignment operator. More...
 
virtual ~GeomObject ()
 (Empty) destructor More...
 
unsigned nlagrangian () const
 Access function to # of Lagrangian coordinates. More...
 
unsigned ndim () const
 Access function to # of Eulerian coordinates. More...
 
void set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
 Set # of Lagrangian and Eulerian coordinates. More...
 
TimeStepper *& time_stepper_pt ()
 
TimeSteppertime_stepper_pt () const
 
virtual void position (const double &t, const Vector< double > &zeta, Vector< double > &r) const
 
virtual void dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const
 
virtual void d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const
 
virtual void d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const
 
- Public Member Functions inherited from oomph::SolidElementWithDiagonalMassMatrix
 SolidElementWithDiagonalMassMatrix ()
 Empty constructor. More...
 
virtual ~SolidElementWithDiagonalMassMatrix ()
 Virtual destructor. More...
 
 SolidElementWithDiagonalMassMatrix (const SolidElementWithDiagonalMassMatrix &)=delete
 Broken copy constructor. More...
 
void operator= (const SolidElementWithDiagonalMassMatrix &)=delete
 Broken assignment operator. More...
 
- Public Member Functions inherited from oomph::ElementWithZ2ErrorEstimator
 ElementWithZ2ErrorEstimator ()
 Default empty constructor. More...
 
 ElementWithZ2ErrorEstimator (const ElementWithZ2ErrorEstimator &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithZ2ErrorEstimator &)=delete
 Broken assignment operator. More...
 
virtual unsigned ncompound_fluxes ()
 
virtual void compute_exact_Z2_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_flux_pt, double &error, double &norm)
 
virtual void get_Z2_compound_flux_indices (Vector< unsigned > &flux_index)
 
virtual double geometric_jacobian (const Vector< double > &x)
 

Protected Member Functions

int solid_p_local_eqn (const unsigned &i) const
 
void solid_pshape (const Vector< double > &s, Shape &psi) const
 Pressure shape functions at local coordinate s. More...
 
const unsigned Pconv [3]
 Data for the pressure conversion array. More...
 
const unsigned Pconv [4]
 Data for the pressure conversion array. More...
 
void solid_pshape (const Vector< double > &s, Shape &psi) const
 
void solid_pshape (const Vector< double > &s, Shape &psi) const
 
- Protected Member Functions inherited from oomph::PVDEquationsWithPressure< DIM >
void get_stress (const DenseMatrix< double > &g, const DenseMatrix< double > &G, DenseMatrix< double > &sigma_dev, DenseMatrix< double > &Gcontra, double &gen_dil, double &inv_kappa)
 
void get_d_stress_dG_upper (const DenseMatrix< double > &g, const DenseMatrix< double > &G, const DenseMatrix< double > &sigma, const double &gen_dil, const double &inv_kappa, const double &interpolated_solid_p, RankFourTensor< double > &d_sigma_dG, DenseMatrix< double > &d_gen_dil_dG)
 
void solid_pshape_at_knot (const unsigned &ipt, Shape &psi) const
 Return the stored solid shape functions at the knots. More...
 
virtual void fill_in_generic_residual_contribution_pvd_with_pressure (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, const unsigned &flag)
 
void get_stress (const DenseMatrix< double > &g, const DenseMatrix< double > &G, DenseMatrix< double > &sigma_dev, DenseMatrix< double > &Gcontra, double &detG)
 
void get_d_stress_dG_upper (const DenseMatrix< double > &g, const DenseMatrix< double > &G, const DenseMatrix< double > &sigma, const double &detG, const double &interpolated_solid_p, RankFourTensor< double > &d_sigma_dG, DenseMatrix< double > &d_detG_dG)
 
- Protected Member Functions inherited from oomph::SolidFiniteElement
void fill_in_generic_jacobian_for_solid_ic (Vector< double > &residuals, DenseMatrix< double > &jacobian, const unsigned &flag)
 
void set_nnodal_lagrangian_type (const unsigned &nlagrangian_type)
 
virtual double local_to_lagrangian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_lagrangian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_lagrangian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual void assign_solid_local_eqn_numbers (const bool &store_local_dof)
 Assign local equation numbers for the solid equations in the element. More...
 
void describe_solid_local_dofs (std::ostream &out, const std::string &current_string) const
 Classifies dofs locally for solid specific aspects. More...
 
virtual void fill_in_jacobian_from_solid_position_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_solid_position_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_solid_position_fd ()
 
virtual void reset_after_solid_position_fd ()
 
virtual void update_in_solid_position_fd (const unsigned &i)
 
virtual void reset_in_solid_position_fd (const unsigned &i)
 
- Protected Member Functions inherited from oomph::FiniteElement
virtual void assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const
 
virtual void assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const
 
virtual void assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const
 
template<unsigned DIM>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual void dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<unsigned DIM>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
virtual void d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<unsigned DIM>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
virtual void transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
void transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
virtual void transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
virtual void fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_nodal_fd ()
 
virtual void reset_after_nodal_fd ()
 
virtual void update_in_nodal_fd (const unsigned &i)
 
virtual void reset_in_nodal_fd (const unsigned &i)
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 One-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Two-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
- Protected Member Functions inherited from oomph::GeneralisedElement
unsigned add_internal_data (Data *const &data_pt, const bool &fd=true)
 
bool internal_data_fd (const unsigned &i) const
 
void exclude_internal_data_fd (const unsigned &i)
 
void include_internal_data_fd (const unsigned &i)
 
void clear_global_eqn_numbers ()
 
void add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)
 
virtual void assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void assign_additional_local_eqn_numbers ()
 
int internal_local_eqn (const unsigned &i, const unsigned &j) const
 
int external_local_eqn (const unsigned &i, const unsigned &j)
 
void fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
virtual void update_before_internal_fd ()
 
virtual void reset_after_internal_fd ()
 
virtual void update_in_internal_fd (const unsigned &i)
 
virtual void reset_in_internal_fd (const unsigned &i)
 
virtual void update_before_external_fd ()
 
virtual void reset_after_external_fd ()
 
virtual void update_in_external_fd (const unsigned &i)
 
virtual void reset_in_external_fd (const unsigned &i)
 
virtual void fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 

Static Protected Attributes

static const unsigned Pconv []
 
- Static Protected Attributes inherited from oomph::PVDEquationsBase< DIM >
static double Default_lambda_sq_value = 1.0
 Static default value for timescale ratio (1.0 – for natural scaling) More...
 
- Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned Default_Initial_Nvalue = 0
 Default value for the number of values at a node. More...
 
static const double Node_location_tolerance = 1.0e-14
 
static const unsigned N2deriv [] = {0, 1, 3, 6}
 
- Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< doubleDummy_matrix
 
static std::deque< double * > Dof_pt_deque
 

Private Member Functions

void unpin_elemental_solid_pressure_dofs ()
 Unpin all solid pressure dofs in the element. More...
 
const unsigned Initial_Nvalue [6]
 Data for the number of variables at each node. More...
 
const unsigned Initial_Nvalue [10]
 Data for the number of variables at each node. More...
 

Static Private Attributes

static const unsigned Initial_Nvalue []
 Static array of ints to hold number of variables at node. More...
 

Additional Inherited Members

- Public Types inherited from oomph::PVDEquationsBase< DIM >
typedef void(* IsotropicGrowthFctPt) (const Vector< double > &xi, double &gamma)
 
typedef double(* PrestressFctPt) (const unsigned &i, const unsigned &j, const Vector< double > &xi)
 
typedef void(* BodyForceFctPt) (const double &t, const Vector< double > &xi, Vector< double > &b)
 
- Public Types inherited from oomph::SolidFiniteElement
typedef double(* MultiplierFctPt) (const Vector< double > &xi)
 
- Public Types inherited from oomph::FiniteElement
typedef void(* SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)
 
typedef void(* UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)
 
- Static Public Member Functions inherited from oomph::PVDEquationsBase< DIM >
static void pin_redundant_nodal_solid_pressures (const Vector< GeneralisedElement * > &element_pt)
 
static void unpin_all_solid_pressure_dofs (const Vector< GeneralisedElement * > &element_pt)
 Unpin all pressure dofs in elements listed in vector. More...
 
- Static Public Attributes inherited from oomph::FiniteElement
static double Tolerance_for_singular_jacobian = 1.0e-16
 Tolerance below which the jacobian is considered singular. More...
 
static bool Accept_negative_jacobian = false
 
static bool Suppress_output_while_checking_for_inverted_elements
 
- Static Public Attributes inherited from oomph::GeneralisedElement
static bool Suppress_warning_about_repeated_internal_data
 
static bool Suppress_warning_about_repeated_external_data = true
 
static double Default_fd_jacobian_step = 1.0e-8
 
- Protected Attributes inherited from oomph::PVDEquationsWithPressure< DIM >
bool Incompressible
 Boolean to determine whether the solid is incompressible or not. More...
 
- Protected Attributes inherited from oomph::PVDEquationsBase< DIM >
IsotropicGrowthFctPt Isotropic_growth_fct_pt
 Pointer to isotropic growth function. More...
 
PrestressFctPt Prestress_fct_pt
 Pointer to prestress function. More...
 
ConstitutiveLawConstitutive_law_pt
 Pointer to the constitutive law. More...
 
doubleLambda_sq_pt
 Timescale ratio (non-dim. density) More...
 
bool Unsteady
 Flag that switches inertia on/off. More...
 
BodyForceFctPt Body_force_fct_pt
 Pointer to body force function. More...
 
bool Evaluate_jacobian_by_fd
 Use FD to evaluate Jacobian. More...
 
- Protected Attributes inherited from oomph::SolidFiniteElement
MacroElementUndeformed_macro_elem_pt
 Pointer to the element's "undeformed" macro element (NULL by default) More...
 
SolidInitialConditionSolid_ic_pt
 Pointer to object that specifies the initial condition. More...
 
bool Solve_for_consistent_newmark_accel_flag
 
- Protected Attributes inherited from oomph::FiniteElement
MacroElementMacro_elem_pt
 Pointer to the element's macro element (NULL by default) More...
 
- Protected Attributes inherited from oomph::GeomObject
unsigned NLagrangian
 Number of Lagrangian (intrinsic) coordinates. More...
 
unsigned Ndim
 Number of Eulerian coordinates. More...
 
TimeStepperGeom_object_time_stepper_pt
 

Detailed Description

template<unsigned DIM>
class oomph::TPVDElementWithContinuousPressure< DIM >

An Element that solves the solid mechanics equations in an (near) incompressible formulation with quadratic interpolation for velocities and positions and continous linear pressure interpolation. This is equivalent to the TTaylorHoodElement element for fluids.

Constructor & Destructor Documentation

◆ TPVDElementWithContinuousPressure() [1/2]

Constructor.

2140  : SolidTElement<DIM, 3>(), PVDEquationsWithPressure<DIM>()
2141  {
2142  }

◆ TPVDElementWithContinuousPressure() [2/2]

Broken copy constructor.

Member Function Documentation

◆ fix_solid_pressure()

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::fix_solid_pressure ( const unsigned l,
const double pvalue 
)
inline

Fix the pressure dof l to be the value pvalue.

2188  {
2189  this->node_pt(Pconv[l])->pin(this->solid_p_nodal_index());
2190  this->node_pt(Pconv[l])->set_value(this->solid_p_nodal_index(), pvalue);
2191  }
void pin(const unsigned &i)
Pin the i-th stored variable.
Definition: nodes.h:385
void set_value(const unsigned &i, const double &value_)
Definition: nodes.h:271
Node *& node_pt(const unsigned &n)
Return a pointer to the local node n.
Definition: elements.h:2175
int solid_p_nodal_index() const
Broken assignment operator.
Definition: solid_elements.h:2158
static const unsigned Pconv[]
Definition: solid_elements.h:2124

References oomph::FiniteElement::node_pt(), oomph::Data::pin(), oomph::Data::set_value(), and oomph::TPVDElementWithContinuousPressure< DIM >::solid_p_nodal_index().

◆ get_Z2_flux()

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::get_Z2_flux ( const Vector< double > &  s,
Vector< double > &  flux 
)
inlinevirtual

Get 'flux' for Z2 error recovery: Upper triangular entries in strain tensor.

Implements oomph::ElementWithZ2ErrorEstimator.

2247  {
2248 #ifdef PARANOID
2249  unsigned num_entries = DIM + ((DIM * DIM) - DIM) / 2;
2250  if (flux.size() != num_entries)
2251  {
2252  std::ostringstream error_message;
2253  error_message << "The flux vector has the wrong number of entries, "
2254  << flux.size() << ", whereas it should be " << num_entries
2255  << std::endl;
2256  throw OomphLibError(error_message.str(),
2259  }
2260 #endif
2261 
2262  // Get strain matrix
2263  DenseMatrix<double> strain(DIM);
2264  this->get_strain(s, strain);
2265 
2266  // Pack into flux Vector
2267  unsigned icount = 0;
2268 
2269  // Start with diagonal terms
2270  for (unsigned i = 0; i < DIM; i++)
2271  {
2272  flux[icount] = strain(i, i);
2273  icount++;
2274  }
2275  // Off diagonals row by row
2276  for (unsigned i = 0; i < DIM; i++)
2277  {
2278  for (unsigned j = i + 1; j < DIM; j++)
2279  {
2280  flux[icount] = strain(i, j);
2281  icount++;
2282  }
2283  }
2284  }
int i
Definition: BiCGSTAB_step_by_step.cpp:9
void get_strain(const Vector< double > &s, DenseMatrix< double > &strain) const
Return the strain tensor.
Definition: solid_elements.cc:47
#define DIM
Definition: linearised_navier_stokes_elements.h:44
void flux(const double &time, const Vector< double > &x, double &flux)
Get flux applied along boundary x=0.
Definition: pretend_melt.cc:59
#define OOMPH_EXCEPTION_LOCATION
Definition: oomph_definitions.h:61
#define OOMPH_CURRENT_FUNCTION
Definition: oomph_definitions.h:86
std::ptrdiff_t j
Definition: tut_arithmetic_redux_minmax.cpp:2

References DIM, ProblemParameters::flux(), oomph::PVDEquationsBase< DIM >::get_strain(), i, j, OOMPH_CURRENT_FUNCTION, and OOMPH_EXCEPTION_LOCATION.

◆ Initial_Nvalue() [1/2]

const unsigned oomph::TPVDElementWithContinuousPressure< 3 >::Initial_Nvalue
private

Data for the number of variables at each node.

◆ Initial_Nvalue() [2/2]

const unsigned oomph::TPVDElementWithContinuousPressure< 2 >::Initial_Nvalue
private

Data for the number of variables at each node.

//////////////////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////////

◆ npres_solid() [1/3]

template<unsigned DIM>
unsigned oomph::TPVDElementWithContinuousPressure< DIM >::npres_solid ( ) const
virtual

Return number of pressure values.

Reimplemented from oomph::PVDEquationsBase< DIM >.

◆ npres_solid() [2/3]

unsigned oomph::TPVDElementWithContinuousPressure< 2 >::npres_solid ( ) const
inlinevirtual

2D : Number of pressure values

Reimplemented from oomph::PVDEquationsBase< DIM >.

2296  {
2297  return 3;
2298  }

◆ npres_solid() [3/3]

unsigned oomph::TPVDElementWithContinuousPressure< 3 >::npres_solid ( ) const
inlinevirtual

3D : Number of pressure values

Reimplemented from oomph::PVDEquationsBase< DIM >.

2306  {
2307  return 4;
2308  }

◆ nrecovery_order()

template<unsigned DIM>
unsigned oomph::TPVDElementWithContinuousPressure< DIM >::nrecovery_order ( )
inlinevirtual

Order of recovery shape functions for Z2 error estimation: Same order as shape functions.

Implements oomph::ElementWithZ2ErrorEstimator.

2221  {
2222  return 2;
2223  }

◆ num_Z2_flux_terms()

template<unsigned DIM>
unsigned oomph::TPVDElementWithContinuousPressure< DIM >::num_Z2_flux_terms ( )
inlinevirtual

Number of 'flux' terms for Z2 error estimation.

Implements oomph::ElementWithZ2ErrorEstimator.

2239  {
2240  // DIM Diagonal strain rates and DIM*(DIM-1)/2 off diagonal terms
2241  return DIM + DIM * (DIM - 1) / 2;
2242  }

References DIM.

◆ nvertex_node()

template<unsigned DIM>
unsigned oomph::TPVDElementWithContinuousPressure< DIM >::nvertex_node ( ) const
inlinevirtual

Number of vertex nodes in the element.

Implements oomph::ElementWithZ2ErrorEstimator.

2227  {
2228  return TElement<DIM, 3>::nvertex_node();
2229  }

◆ output() [1/4]

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::output ( FILE *  file_pt)
inlinevirtual

C-style generic FiniteElement output function.

Reimplemented from oomph::PVDEquationsWithPressure< DIM >.

2208  {
2209  FiniteElement::output(file_pt);
2210  }
virtual void output(std::ostream &outfile)
Definition: elements.h:3050

References oomph::FiniteElement::output().

◆ output() [2/4]

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::output ( FILE *  file_pt,
const unsigned n_plot 
)
inlinevirtual

C-style PVDEquationsWithPressure output function.

Reimplemented from oomph::PVDEquationsWithPressure< DIM >.

2214  {
2215  PVDEquationsWithPressure<DIM>::output(file_pt, n_plot);
2216  }
void output(std::ostream &outfile)
Output: x,y,[z],xi0,xi1,[xi2],p,gamma.
Definition: solid_elements.h:1033

References oomph::PVDEquationsWithPressure< DIM >::output().

◆ output() [3/4]

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::output ( std::ostream &  outfile)
inlinevirtual

Generic FiniteElement output function.

Reimplemented from oomph::PVDEquationsWithPressure< DIM >.

2195  {
2196  FiniteElement::output(outfile);
2197  }

References oomph::FiniteElement::output().

◆ output() [4/4]

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::output ( std::ostream &  outfile,
const unsigned n_plot 
)
inlinevirtual

PVDEquationsWithPressure output function.

Reimplemented from oomph::PVDEquationsWithPressure< DIM >.

2201  {
2202  PVDEquationsWithPressure<DIM>::output(outfile, n_plot);
2203  }

References oomph::PVDEquationsWithPressure< DIM >::output().

◆ Pconv() [1/2]

Data for the pressure conversion array.

◆ Pconv() [2/2]

Data for the pressure conversion array.

◆ required_nvalue()

template<unsigned DIM>
virtual unsigned oomph::TPVDElementWithContinuousPressure< DIM >::required_nvalue ( const unsigned n) const
inlinevirtual

Number of values (pinned or dofs) required at node n. Can be overwritten for hanging node version

Reimplemented from oomph::FiniteElement.

2166  {
2167  return Initial_Nvalue[n];
2168  }
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
static const unsigned Initial_Nvalue[]
Static array of ints to hold number of variables at node.
Definition: solid_elements.h:2106

References oomph::TPVDElementWithContinuousPressure< DIM >::Initial_Nvalue, and n.

◆ set_solid_p()

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::set_solid_p ( const unsigned l,
const double p_value 
)
inlinevirtual

Set the l-th solid pressure value to p_value.

Implements oomph::PVDEquationsWithPressure< DIM >.

2179  {
2180  this->node_pt(Pconv[l])->set_value(this->solid_p_nodal_index(), p_value);
2181  }

References oomph::FiniteElement::node_pt(), oomph::Data::set_value(), and oomph::TPVDElementWithContinuousPressure< DIM >::solid_p_nodal_index().

◆ solid_p()

template<unsigned DIM>
double oomph::TPVDElementWithContinuousPressure< DIM >::solid_p ( const unsigned l)
inlinevirtual

Return the l-th pressure value, make sure to use the hanging representation if there is one!

Implements oomph::PVDEquationsWithPressure< DIM >.

2173  {
2174  return this->nodal_value(Pconv[l], this->solid_p_nodal_index());
2175  }
double nodal_value(const unsigned &n, const unsigned &i) const
Definition: elements.h:2593

References oomph::FiniteElement::nodal_value(), and oomph::TPVDElementWithContinuousPressure< DIM >::solid_p_nodal_index().

◆ solid_p_local_eqn()

template<unsigned DIM>
int oomph::TPVDElementWithContinuousPressure< DIM >::solid_p_local_eqn ( const unsigned i) const
inlineprotectedvirtual

Overload the access function that is used to return local equation corresponding to the i-th solid pressure value

Reimplemented from oomph::PVDEquationsBase< DIM >.

2130  {
2131  return this->nodal_local_eqn(Pconv[i], this->solid_p_nodal_index());
2132  }
int nodal_local_eqn(const unsigned &n, const unsigned &i) const
Definition: elements.h:1432

References i, oomph::FiniteElement::nodal_local_eqn(), and oomph::TPVDElementWithContinuousPressure< DIM >::solid_p_nodal_index().

◆ solid_p_nodal_index()

◆ solid_pshape() [1/3]

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::solid_pshape ( const Vector< double > &  s,
Shape psi 
) const
inlineprotectedvirtual

Pressure shape functions at local coordinate s.

Implements oomph::PVDEquationsWithPressure< DIM >.

◆ solid_pshape() [2/3]

void oomph::TPVDElementWithContinuousPressure< 2 >::solid_pshape ( const Vector< double > &  s,
Shape psi 
) const
inlineprotectedvirtual

2D : Pressure shape functions

Implements oomph::PVDEquationsWithPressure< DIM >.

2318  {
2319  psi[0] = s[0];
2320  psi[1] = s[1];
2321  psi[2] = 1.0 - s[0] - s[1];
2322  }
RealScalar s
Definition: level1_cplx_impl.h:130

References s.

◆ solid_pshape() [3/3]

void oomph::TPVDElementWithContinuousPressure< 3 >::solid_pshape ( const Vector< double > &  s,
Shape psi 
) const
inlineprotectedvirtual

3D : Pressure shape functions

Implements oomph::PVDEquationsWithPressure< DIM >.

2331  {
2332  psi[0] = s[0];
2333  psi[1] = s[1];
2334  psi[2] = s[2];
2335  psi[3] = 1.0 - s[0] - s[1] - s[2];
2336  }

References s.

◆ unpin_elemental_solid_pressure_dofs()

template<unsigned DIM>
void oomph::TPVDElementWithContinuousPressure< DIM >::unpin_elemental_solid_pressure_dofs ( )
inlineprivatevirtual

Unpin all solid pressure dofs in the element.

Implements oomph::PVDEquationsBase< DIM >.

2110  {
2111  // find the index at which the pressure is stored
2112  int p_index = this->solid_p_nodal_index();
2113  unsigned n_node = this->nnode();
2114  // loop over nodes
2115  for (unsigned n = 0; n < n_node; n++)
2116  {
2117  this->node_pt(n)->unpin(p_index);
2118  }
2119  }
void unpin(const unsigned &i)
Unpin the i-th stored variable.
Definition: nodes.h:391
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2210

References n, oomph::FiniteElement::nnode(), oomph::FiniteElement::node_pt(), oomph::TPVDElementWithContinuousPressure< DIM >::solid_p_nodal_index(), and oomph::Data::unpin().

◆ vertex_node_pt()

template<unsigned DIM>
Node* oomph::TPVDElementWithContinuousPressure< DIM >::vertex_node_pt ( const unsigned j) const
inlinevirtual

Pointer to the j-th vertex node in the element.

Implements oomph::ElementWithZ2ErrorEstimator.

2233  {
2234  return TElement<DIM, 3>::vertex_node_pt(j);
2235  }

References j.

Member Data Documentation

◆ Initial_Nvalue

template<unsigned DIM>
const unsigned oomph::TPVDElementWithContinuousPressure< DIM >::Initial_Nvalue[]
staticprivate

Static array of ints to hold number of variables at node.

Referenced by oomph::TPVDElementWithContinuousPressure< DIM >::required_nvalue().

◆ Pconv

template<unsigned DIM>
const unsigned oomph::TPVDElementWithContinuousPressure< DIM >::Pconv[]
staticprotected

Static array of ints to hold conversion from pressure node numbers to actual node numbers


The documentation for this class was generated from the following file: