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| StefanBoltzmannMeltElement (FiniteElement *const &bulk_el_pt, const int &face_index) |
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| StefanBoltzmannMeltElement (const StefanBoltzmannMeltElement &dummy) |
| Broken copy constructor. More...
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double | zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const |
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| StefanBoltzmannUnsteadyHeatFluxElement (FiniteElement *const &bulk_el_pt, const int &face_index) |
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| StefanBoltzmannUnsteadyHeatFluxElement (const StefanBoltzmannUnsteadyHeatFluxElement &dummy) |
| Broken copy constructor. More...
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void | set_integration_scheme (Integral *const &integral_pt) |
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double | zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const |
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void | output_stefan_boltzmann_radiation (std::ostream &outfile) |
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| FaceElement () |
| Constructor: Initialise all appropriate member data. More...
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virtual | ~FaceElement () |
| Empty virtual destructor. More...
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| FaceElement (const FaceElement &)=delete |
| Broken copy constructor. More...
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const unsigned & | boundary_number_in_bulk_mesh () const |
| Broken assignment operator. More...
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void | set_boundary_number_in_bulk_mesh (const unsigned &b) |
| Set function for the boundary number in bulk mesh. More...
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double | J_eulerian (const Vector< double > &s) const |
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double | J_eulerian_at_knot (const unsigned &ipt) const |
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void | check_J_eulerian_at_knots (bool &passed) const |
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double | interpolated_x (const Vector< double > &s, const unsigned &i) const |
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double | interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const |
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void | interpolated_x (const Vector< double > &s, Vector< double > &x) const |
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void | interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const |
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double | interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t) |
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void | interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt) |
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int & | normal_sign () |
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int | normal_sign () const |
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int & | face_index () |
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int | face_index () const |
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const Vector< double > * | tangent_direction_pt () const |
| Public access function for the tangent direction pointer. More...
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void | set_tangent_direction (Vector< double > *tangent_direction_pt) |
| Set the tangent direction vector. More...
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void | turn_on_warning_for_discontinuous_tangent () |
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void | turn_off_warning_for_discontinuous_tangent () |
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void | continuous_tangent_and_outer_unit_normal (const Vector< double > &s, Vector< Vector< double >> &tang_vec, Vector< double > &unit_normal) const |
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void | continuous_tangent_and_outer_unit_normal (const unsigned &ipt, Vector< Vector< double >> &tang_vec, Vector< double > &unit_normal) const |
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void | outer_unit_normal (const Vector< double > &s, Vector< double > &unit_normal) const |
| Compute outer unit normal at the specified local coordinate. More...
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void | outer_unit_normal (const unsigned &ipt, Vector< double > &unit_normal) const |
| Compute outer unit normal at ipt-th integration point. More...
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FiniteElement *& | bulk_element_pt () |
| Pointer to higher-dimensional "bulk" element. More...
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FiniteElement * | bulk_element_pt () const |
| Pointer to higher-dimensional "bulk" element (const version) More...
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CoordinateMappingFctPt & | face_to_bulk_coordinate_fct_pt () |
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CoordinateMappingFctPt | face_to_bulk_coordinate_fct_pt () const |
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BulkCoordinateDerivativesFctPt & | bulk_coordinate_derivatives_fct_pt () |
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BulkCoordinateDerivativesFctPt | bulk_coordinate_derivatives_fct_pt () const |
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Vector< double > | local_coordinate_in_bulk (const Vector< double > &s) const |
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void | get_local_coordinate_in_bulk (const Vector< double > &s, Vector< double > &s_bulk) const |
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void | get_ds_bulk_ds_face (const Vector< double > &s, DenseMatrix< double > &dsbulk_dsface, unsigned &interior_direction) const |
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unsigned & | bulk_position_type (const unsigned &i) |
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const unsigned & | bulk_position_type (const unsigned &i) const |
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void | bulk_node_number_resize (const unsigned &i) |
| Resize the storage for the bulk node numbers. More...
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unsigned & | bulk_node_number (const unsigned &n) |
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const unsigned & | bulk_node_number (const unsigned &n) const |
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void | bulk_position_type_resize (const unsigned &i) |
| Resize the storage for bulk_position_type to i entries. More...
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unsigned & | nbulk_value (const unsigned &n) |
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unsigned | nbulk_value (const unsigned &n) const |
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void | nbulk_value_resize (const unsigned &i) |
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void | resize_nodes (Vector< unsigned > &nadditional_data_values) |
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void | output_zeta (std::ostream &outfile, const unsigned &nplot) |
| Output boundary coordinate zeta. More...
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void | set_dimension (const unsigned &dim) |
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void | set_nodal_dimension (const unsigned &nodal_dim) |
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void | set_nnodal_position_type (const unsigned &nposition_type) |
| Set the number of types required to interpolate the coordinate. More...
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void | set_n_node (const unsigned &n) |
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int | nodal_local_eqn (const unsigned &n, const unsigned &i) const |
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double | dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const |
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| FiniteElement () |
| Constructor. More...
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virtual | ~FiniteElement () |
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| FiniteElement (const FiniteElement &)=delete |
| Broken copy constructor. More...
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virtual bool | local_coord_is_valid (const Vector< double > &s) |
| Broken assignment operator. More...
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virtual void | move_local_coord_back_into_element (Vector< double > &s) const |
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void | get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const |
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virtual void | local_coordinate_of_node (const unsigned &j, Vector< double > &s) const |
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virtual void | local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction) |
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virtual double | local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i) |
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MacroElement * | macro_elem_pt () |
| Access function to pointer to macro element. More...
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void | get_x (const Vector< double > &s, Vector< double > &x) const |
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void | get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) |
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virtual void | get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const |
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virtual void | get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x) |
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Integral *const & | integral_pt () const |
| Return the pointer to the integration scheme (const version) More...
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virtual void | shape (const Vector< double > &s, Shape &psi) const =0 |
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virtual void | shape_at_knot (const unsigned &ipt, Shape &psi) const |
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virtual void | dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const |
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virtual void | dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const |
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virtual void | d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const |
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virtual void | d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const |
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void | check_J_eulerian_at_knots (bool &passed) const |
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void | check_jacobian (const double &jacobian) const |
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double | dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const |
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virtual double | dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const |
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virtual double | dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const |
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double | d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const |
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virtual double | d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const |
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virtual void | assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt) |
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virtual void | describe_nodal_local_dofs (std::ostream &out, const std::string ¤t_string) const |
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Node *& | node_pt (const unsigned &n) |
| Return a pointer to the local node n. More...
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Node *const & | node_pt (const unsigned &n) const |
| Return a pointer to the local node n (const version) More...
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unsigned | nnode () const |
| Return the number of nodes. More...
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virtual unsigned | nnode_1d () const |
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double | raw_nodal_position (const unsigned &n, const unsigned &i) const |
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double | raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const |
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double | raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const |
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double | raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const |
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double | raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | nodal_position (const unsigned &n, const unsigned &i) const |
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double | nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const |
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double | dnodal_position_dt (const unsigned &n, const unsigned &i) const |
| Return the i-th component of nodal velocity: dx/dt at local node n. More...
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double | dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const |
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double | nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const |
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virtual void | get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates) |
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virtual void | disable_ALE () |
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virtual void | enable_ALE () |
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virtual unsigned | required_nvalue (const unsigned &n) const |
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unsigned | nnodal_position_type () const |
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bool | has_hanging_nodes () const |
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unsigned | nodal_dimension () const |
| Return the required Eulerian dimension of the nodes in this element. More...
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virtual unsigned | nvertex_node () const |
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virtual Node * | vertex_node_pt (const unsigned &j) const |
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int | get_node_number (Node *const &node_pt) const |
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virtual Node * | get_node_at_local_coordinate (const Vector< double > &s) const |
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double | raw_nodal_value (const unsigned &n, const unsigned &i) const |
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double | raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const |
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double | nodal_value (const unsigned &n, const unsigned &i) const |
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double | nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const |
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unsigned | dim () const |
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virtual ElementGeometry::ElementGeometry | element_geometry () const |
| Return the geometry type of the element (either Q or T usually). More...
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void | position (const Vector< double > &zeta, Vector< double > &r) const |
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void | position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const |
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void | dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt) |
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void | interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const |
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void | locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false) |
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virtual void | node_update () |
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virtual void | identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data) |
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virtual double | s_min () const |
| Min value of local coordinate. More...
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virtual double | s_max () const |
| Max. value of local coordinate. More...
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double | size () const |
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virtual double | compute_physical_size () const |
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virtual void | point_output_data (const Vector< double > &s, Vector< double > &data) |
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void | point_output (std::ostream &outfile, const Vector< double > &s) |
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virtual unsigned | nplot_points_paraview (const unsigned &nplot) const |
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virtual unsigned | nsub_elements_paraview (const unsigned &nplot) const |
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void | output_paraview (std::ofstream &file_out, const unsigned &nplot) const |
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virtual void | write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const |
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virtual void | write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const |
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virtual void | write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const |
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virtual unsigned | nscalar_paraview () const |
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virtual void | scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const |
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virtual void | scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const |
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virtual void | scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const |
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virtual std::string | scalar_name_paraview (const unsigned &i) const |
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virtual void | output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const |
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virtual void | output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) |
| Output an exact solution over the element. More...
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virtual void | output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) |
| Output a time-dependent exact solution over the element. More...
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virtual void | output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const |
| Output a time-dependent exact solution over the element. More...
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virtual void | get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const |
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virtual std::string | tecplot_zone_string (const unsigned &nplot) const |
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virtual void | write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const |
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virtual void | write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const |
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virtual unsigned | nplot_points (const unsigned &nplot) const |
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virtual void | compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm) |
| Calculate the norm of the error and that of the exact solution. More...
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virtual void | compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm) |
| Calculate the norm of the error and that of the exact solution. More...
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virtual void | compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm) |
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virtual void | compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm) |
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virtual void | compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm) |
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virtual void | compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm) |
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virtual void | compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm) |
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virtual void | compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm) |
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virtual void | compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error) |
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void | integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral) |
| Integrate Vector-valued function over element. More...
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void | integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral) |
| Integrate Vector-valued time-dep function over element. More...
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virtual void | build_face_element (const int &face_index, FaceElement *face_element_pt) |
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virtual unsigned | self_test () |
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virtual unsigned | get_bulk_node_number (const int &face_index, const unsigned &i) const |
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virtual int | face_outer_unit_normal_sign (const int &face_index) const |
| Get the sign of the outer unit normal on the face given by face_index. More...
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virtual unsigned | nnode_on_face () const |
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void | face_node_number_error_check (const unsigned &i) const |
| Range check for face node numbers. More...
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virtual CoordinateMappingFctPt | face_to_bulk_coordinate_fct_pt (const int &face_index) const |
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virtual BulkCoordinateDerivativesFctPt | bulk_coordinate_derivatives_fct_pt (const int &face_index) const |
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| GeneralisedElement () |
| Constructor: Initialise all pointers and all values to zero. More...
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virtual | ~GeneralisedElement () |
| Virtual destructor to clean up any memory allocated by the object. More...
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| GeneralisedElement (const GeneralisedElement &)=delete |
| Broken copy constructor. More...
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void | operator= (const GeneralisedElement &)=delete |
| Broken assignment operator. More...
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Data *& | internal_data_pt (const unsigned &i) |
| Return a pointer to i-th internal data object. More...
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Data *const & | internal_data_pt (const unsigned &i) const |
| Return a pointer to i-th internal data object (const version) More...
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Data *& | external_data_pt (const unsigned &i) |
| Return a pointer to i-th external data object. More...
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Data *const & | external_data_pt (const unsigned &i) const |
| Return a pointer to i-th external data object (const version) More...
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unsigned long | eqn_number (const unsigned &ieqn_local) const |
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int | local_eqn_number (const unsigned long &ieqn_global) const |
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unsigned | add_external_data (Data *const &data_pt, const bool &fd=true) |
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bool | external_data_fd (const unsigned &i) const |
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void | exclude_external_data_fd (const unsigned &i) |
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void | include_external_data_fd (const unsigned &i) |
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void | flush_external_data () |
| Flush all external data. More...
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void | flush_external_data (Data *const &data_pt) |
| Flush the object addressed by data_pt from the external data array. More...
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unsigned | ninternal_data () const |
| Return the number of internal data objects. More...
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unsigned | nexternal_data () const |
| Return the number of external data objects. More...
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unsigned | ndof () const |
| Return the number of equations/dofs in the element. More...
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void | dof_vector (const unsigned &t, Vector< double > &dof) |
| Return the vector of dof values at time level t. More...
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void | dof_pt_vector (Vector< double * > &dof_pt) |
| Return the vector of pointers to dof values. More...
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void | set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data) |
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void | assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt) |
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void | describe_dofs (std::ostream &out, const std::string ¤t_string) const |
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void | add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt) |
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virtual void | assign_local_eqn_numbers (const bool &store_local_dof_pt) |
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virtual void | complete_setup_of_dependencies () |
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virtual void | get_residuals (Vector< double > &residuals) |
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virtual void | get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian) |
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virtual void | get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix) |
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virtual void | get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix) |
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virtual void | get_dresiduals_dparameter (double *const ¶meter_pt, Vector< double > &dres_dparam) |
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virtual void | get_djacobian_dparameter (double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam) |
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virtual void | get_djacobian_and_dmass_matrix_dparameter (double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam) |
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virtual void | get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product) |
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virtual void | get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product) |
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virtual void | get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector) |
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virtual void | compute_norm (Vector< double > &norm) |
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virtual unsigned | ndof_types () const |
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virtual void | get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const |
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| GeomObject () |
| Default constructor. More...
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| GeomObject (const unsigned &ndim) |
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| GeomObject (const unsigned &nlagrangian, const unsigned &ndim) |
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| GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt) |
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| GeomObject (const GeomObject &dummy)=delete |
| Broken copy constructor. More...
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void | operator= (const GeomObject &)=delete |
| Broken assignment operator. More...
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virtual | ~GeomObject () |
| (Empty) destructor More...
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unsigned | nlagrangian () const |
| Access function to # of Lagrangian coordinates. More...
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unsigned | ndim () const |
| Access function to # of Eulerian coordinates. More...
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void | set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim) |
| Set # of Lagrangian and Eulerian coordinates. More...
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TimeStepper *& | time_stepper_pt () |
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TimeStepper * | time_stepper_pt () const |
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virtual void | position (const double &t, const Vector< double > &zeta, Vector< double > &r) const |
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virtual void | dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const |
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virtual void | d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const |
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virtual void | d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const |
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| StefanBoltzmannRadiationBase () |
| Constructor. More...
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double *& | sigma_pt () |
| Pointer to non-dim Stefan Boltzmann constant. More...
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double *& | theta_0_pt () |
| Pointer to non-dim zero centrigrade offset in Stefan Boltzmann law. More...
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double | sigma () |
| Non-dim Stefan Boltzmann constant (switched off by default) More...
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double | theta_0 () |
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double | contribution_to_stefan_boltzmann_radiation (const Vector< double > &r_illuminated, const Vector< double > &n_illuminated, const Vector< unsigned > &visible_intpts_in_current_element) |
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double | contribution_to_stefan_boltzmann_radiation (const Vector< double > &r_illuminated, const Vector< double > &n_illuminated, const Vector< unsigned > &visible_intpts_in_current_element, std::ofstream &outfile) |
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void | wipe_stefan_boltzmann_illumination_info () |
| Wipe illumination info. More...
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void | add_stefan_boltzmann_illumination_info (const unsigned &ipt, StefanBoltzmannRadiationBase *illuminating_el_pt, Vector< unsigned > &illuminating_integration_point_index, const bool &add_solid_position_data=true) |
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void | output_stefan_boltzmann_radiation (std::ostream &outfile) |
| Output Stefan Boltzmann radiation: x,y,in,out,n_x,n_y. More...
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void | output_stefan_boltzmann_radiation_rays (std::ostream &outfile, const unsigned &integration_point=UINT_MAX) |
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double | incoming_stefan_boltzmann_radiation (const unsigned &ipt, const Vector< double > &r_illuminated, const Vector< double > &n_illuminated) |
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| TemplateFreeUnsteadyHeatBaseFaceElement () |
| Constructor. More...
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virtual | ~TemplateFreeUnsteadyHeatBaseFaceElement () |
| Destrutor. More...
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UnsteadyHeatPrescribedFluxFctPt & | flux_fct_pt () |
| Access function for the prescribed-flux function pointer. More...
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| SolarRadiationBase () |
| Constructor. More...
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void | enable_smoothed_sun_shadow (const double &alpha_tanh_smooth_sun_shadow=100.0) |
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void | disable_smoothed_sun_shadow () |
| Disable smoothing of shadow. More...
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bool | smoothed_sun_shadow_is_enabled () |
| Disable smoothing of shadow. More...
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double | alpha_tanh_smooth_sun_shadow () |
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void | update_limiting_angles (const Vector< Node * > &shielding_node_pt) |
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virtual double | atmospheric_radiation (const unsigned &intpt, const double &time, const Vector< double > &x, const Vector< double > &n) |
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void | output_diffuse_radiation_cone (std::ostream &outfile, const double &radius) |
| Output cone of diffuse radiation for all integration points. More...
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void | output_diffuse_radiation_cone_min_angle (std::ostream &outfile, const double &radius) |
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void | output_diffuse_radiation_cone_max_angle (std::ostream &outfile, const double &radius) |
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void | output_limiting_angles (std::ostream &outfile) |
| Output illumination angles for all integration points. More...
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void | output_atmospheric_radiation (std::ostream &outfile) |
| Output diffuse and direct radiation. More...
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| UnsteadyHeatBaseFaceElement (FiniteElement *const &bulk_el_pt, const int &face_index) |
| Constructor. More...
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virtual | ~UnsteadyHeatBaseFaceElement () |
| Destructor. More...
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void | interpolated_u (const Vector< double > &s, double &u) |
| Temperature at local coordinate s. More...
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void | output (std::ostream &outfile) |
| Output function. More...
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void | output (std::ostream &outfile, const unsigned &n_plot) |
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void | output (FILE *file_pt) |
| C_style output function. More...
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void | output (FILE *file_pt, const unsigned &n_plot) |
| C-style output function. More...
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| SurfaceMeltElement (FiniteElement *const &bulk_el_pt, const int &face_index, const unsigned &id=0, const bool &called_from_refineable_constructor=false) |
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double | get_interpolated_lagrange_p (const Vector< double > &s) |
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void | fill_in_contribution_to_residuals (Vector< double > &residuals) |
| Return the residuals. More...
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double | melt_temperature () |
| Melt temperature. More...
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double *& | melt_temperature_pt () |
| Pointer to (non-default) melt temperature. More...
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void | disable_melting () |
| Switch off melting by pinning melt-rate dofs. More...
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void | set_lagrange_multiplier_pressure_to_zero () |
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void | interpolated_melt_rate (const Vector< double > &s, double &melt_flux) |
| Melt rate at local coordinate s. More...
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void | output_melt (std::ostream &outfile) |
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double | zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | interpolated_xi (const Vector< double > &s, const unsigned &i) const |
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void | interpolated_xi (const Vector< double > &s, Vector< double > &xi) const |
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void | set_lagrangian_dimension (const unsigned &lagrangian_dimension) |
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virtual bool | has_internal_solid_data () |
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| SolidFiniteElement () |
| Constructor: Set defaults. More...
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virtual | ~SolidFiniteElement () |
| Destructor to clean up any allocated memory. More...
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| SolidFiniteElement (const SolidFiniteElement &)=delete |
| Broken copy constructor. More...
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unsigned | ngeom_data () const |
| Broken assignment operator. More...
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Data * | geom_data_pt (const unsigned &j) |
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void | identify_geometric_data (std::set< Data * > &geometric_data_pt) |
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virtual void | get_x_and_xi (const Vector< double > &s, Vector< double > &x_fe, Vector< double > &x, Vector< double > &xi_fe, Vector< double > &xi) const |
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virtual void | set_macro_elem_pt (MacroElement *macro_elem_pt) |
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virtual void | set_macro_elem_pt (MacroElement *macro_elem_pt, MacroElement *undeformed_macro_elem_pt) |
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void | set_undeformed_macro_elem_pt (MacroElement *undeformed_macro_elem_pt) |
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MacroElement * | undeformed_macro_elem_pt () |
| Access function to pointer to "undeformed" macro element. More...
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double | dshape_lagrangian (const Vector< double > &s, Shape &psi, DShape &dpsidxi) const |
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virtual double | dshape_lagrangian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidxi) const |
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double | d2shape_lagrangian (const Vector< double > &s, Shape &psi, DShape &dpsidxi, DShape &d2psidxi) const |
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virtual double | d2shape_lagrangian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidxi, DShape &d2psidxi) const |
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unsigned | lagrangian_dimension () const |
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unsigned | nnodal_lagrangian_type () const |
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Node * | construct_node (const unsigned &n) |
| Construct the local node n and return a pointer to it. More...
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Node * | construct_node (const unsigned &n, TimeStepper *const &time_stepper_pt) |
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Node * | construct_boundary_node (const unsigned &n) |
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Node * | construct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt) |
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virtual void | assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt) |
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void | describe_local_dofs (std::ostream &out, const std::string ¤t_string) const |
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double | raw_lagrangian_position (const unsigned &n, const unsigned &i) const |
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double | raw_lagrangian_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const |
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double | lagrangian_position (const unsigned &n, const unsigned &i) const |
| Return i-th Lagrangian coordinate at local node n. More...
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double | lagrangian_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const |
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virtual void | interpolated_dxids (const Vector< double > &s, DenseMatrix< double > &dxids) const |
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virtual void | J_lagrangian (const Vector< double > &s) const |
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virtual double | J_lagrangian_at_knot (const unsigned &ipt) const |
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SolidInitialCondition *& | solid_ic_pt () |
| Pointer to object that describes the initial condition. More...
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void | enable_solve_for_consistent_newmark_accel () |
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void | disable_solve_for_consistent_newmark_accel () |
| Set to reset the problem being solved to be the standard problem. More...
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MultiplierFctPt & | multiplier_fct_pt () |
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MultiplierFctPt | multiplier_fct_pt () const |
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virtual void | get_residuals_for_solid_ic (Vector< double > &residuals) |
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void | fill_in_residuals_for_solid_ic (Vector< double > &residuals) |
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void | fill_in_jacobian_for_solid_ic (Vector< double > &residuals, DenseMatrix< double > &jacobian) |
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void | fill_in_jacobian_for_newmark_accel (DenseMatrix< double > &jacobian) |
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void | compute_norm (double &el_norm) |
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int | position_local_eqn (const unsigned &n, const unsigned &k, const unsigned &j) const |
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typedef void(* | SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &) |
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typedef void(* | UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &) |
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typedef void(* | UnsteadyHeatPrescribedFluxFctPt) (const double &time, const Vector< double > &x, const Vector< double > &n, const double &u, double &flux) |
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typedef double(* | MultiplierFctPt) (const Vector< double > &xi) |
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void(*&)(const double &time, double &solar_flux_magnitude, Vector< double > &solar_flux_unit_vector, double &total_diffuse_radiation) | atmospheric_radiation_fct_pt () |
| Reference to the atmospheric radiation function pointer. More...
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static double | Tolerance_for_singular_jacobian = 1.0e-16 |
| Tolerance below which the jacobian is considered singular. More...
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static bool | Accept_negative_jacobian = false |
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static bool | Suppress_output_while_checking_for_inverted_elements |
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static bool | Suppress_warning_about_repeated_internal_data |
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static bool | Suppress_warning_about_repeated_external_data = true |
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static double | Default_fd_jacobian_step = 1.0e-8 |
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virtual void | get_flux (const unsigned &ipt, const double &time, const Vector< double > &x, const Vector< double > &n, const double &u, double &flux) |
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void | add_additional_values (const Vector< unsigned > &nadditional_values, const unsigned &id) |
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virtual void | assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const |
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virtual void | assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const |
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virtual void | assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const |
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template<unsigned DIM> |
double | invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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virtual double | invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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virtual double | local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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double | local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const |
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virtual double | local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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virtual void | dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const |
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template<unsigned DIM> |
void | dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const |
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virtual void | d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const |
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template<unsigned DIM> |
void | d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const |
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virtual void | transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const |
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void | transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const |
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virtual void | transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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template<unsigned DIM> |
void | transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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template<unsigned DIM> |
void | transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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virtual void | fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian) |
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void | fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian) |
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virtual void | update_before_nodal_fd () |
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virtual void | reset_after_nodal_fd () |
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virtual void | update_in_nodal_fd (const unsigned &i) |
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virtual void | reset_in_nodal_fd (const unsigned &i) |
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template<> |
double | invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
| Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
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template<> |
double | invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
| One-d specialisation of function to calculate inverse of jacobian mapping. More...
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template<> |
double | invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
| Two-d specialisation of function to calculate inverse of jacobian mapping. More...
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template<> |
double | invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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template<> |
void | dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const |
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template<> |
void | dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const |
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template<> |
void | dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const |
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template<> |
void | dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const |
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template<> |
void | d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const |
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template<> |
void | d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const |
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template<> |
void | d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const |
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template<> |
void | d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const |
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template<> |
void | transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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template<> |
void | transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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template<> |
void | transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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template<> |
void | transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const |
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unsigned | add_internal_data (Data *const &data_pt, const bool &fd=true) |
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bool | internal_data_fd (const unsigned &i) const |
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void | exclude_internal_data_fd (const unsigned &i) |
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void | include_internal_data_fd (const unsigned &i) |
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void | clear_global_eqn_numbers () |
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void | add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt) |
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virtual void | assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt) |
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virtual void | assign_additional_local_eqn_numbers () |
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int | internal_local_eqn (const unsigned &i, const unsigned &j) const |
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int | external_local_eqn (const unsigned &i, const unsigned &j) |
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void | fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false) |
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void | fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false) |
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void | fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false) |
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void | fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false) |
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virtual void | update_before_internal_fd () |
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virtual void | reset_after_internal_fd () |
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virtual void | update_in_internal_fd (const unsigned &i) |
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virtual void | reset_in_internal_fd (const unsigned &i) |
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virtual void | update_before_external_fd () |
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virtual void | reset_after_external_fd () |
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virtual void | update_in_external_fd (const unsigned &i) |
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virtual void | reset_in_external_fd (const unsigned &i) |
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virtual void | fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix) |
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virtual void | fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix) |
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virtual void | fill_in_contribution_to_dresiduals_dparameter (double *const ¶meter_pt, Vector< double > &dres_dparam) |
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virtual void | fill_in_contribution_to_djacobian_dparameter (double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam) |
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virtual void | fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const ¶meter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam) |
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virtual void | fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product) |
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virtual void | fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product) |
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virtual void | fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector) |
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double | shape_and_test (const Vector< double > &s, Shape &psi, Shape &test) const |
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void | fill_in_contribution_to_residuals_surface_melt (Vector< double > &residuals) |
| Helper function that actually calculates the residuals. More...
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void | fill_in_generic_jacobian_for_solid_ic (Vector< double > &residuals, DenseMatrix< double > &jacobian, const unsigned &flag) |
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void | set_nnodal_lagrangian_type (const unsigned &nlagrangian_type) |
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virtual double | local_to_lagrangian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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double | local_to_lagrangian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const |
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virtual double | local_to_lagrangian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const |
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virtual void | assign_solid_local_eqn_numbers (const bool &store_local_dof) |
| Assign local equation numbers for the solid equations in the element. More...
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void | describe_solid_local_dofs (std::ostream &out, const std::string ¤t_string) const |
| Classifies dofs locally for solid specific aspects. More...
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void | fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian) |
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virtual void | fill_in_jacobian_from_solid_position_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian) |
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void | fill_in_jacobian_from_solid_position_by_fd (DenseMatrix< double > &jacobian) |
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virtual void | update_before_solid_position_fd () |
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virtual void | reset_after_solid_position_fd () |
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virtual void | update_in_solid_position_fd (const unsigned &i) |
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virtual void | reset_in_solid_position_fd (const unsigned &i) |
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unsigned | Boundary_number_in_bulk_mesh |
| The boundary number in the bulk mesh to which this element is attached. More...
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FiniteElement * | Bulk_element_pt |
| Pointer to the associated higher-dimensional "bulk" element. More...
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Vector< unsigned > | Bulk_node_number |
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Vector< unsigned > | Nbulk_value |
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Vector< double > * | Tangent_direction_pt |
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MacroElement * | Macro_elem_pt |
| Pointer to the element's macro element (NULL by default) More...
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unsigned | NLagrangian |
| Number of Lagrangian (intrinsic) coordinates. More...
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unsigned | Ndim |
| Number of Eulerian coordinates. More...
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TimeStepper * | Geom_object_time_stepper_pt |
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double * | Sigma_pt |
| Pointer to non-dim Stefan Boltzmann constant. More...
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double * | Theta_0_pt |
| Pointer to non-dim zero centrigrade offset in Stefan Boltzmann law. More...
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Vector< Vector< std::pair< StefanBoltzmannRadiationBase *, Vector< unsigned > > > > | Stefan_boltzmann_illumination_info |
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unsigned | U_index_ust_heat |
| Index at which temperature is stored. More...
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unsigned | Dim |
| The spatial dimension of the problem. More...
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UnsteadyHeatPrescribedFluxFctPt | Flux_fct_pt |
| Function pointer to the (global) prescribed-flux function. More...
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bool | Smoothed_sun_shadow |
| Use tanh profile to smooth solar shadows. More...
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double | Alpha_tanh_smooth_sun_shadow |
| Factor for tanh profile to smooth solar shadows. More...
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Vector< std::pair< double, double > > | Diffuse_limit_angles |
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void(* | Atmospheric_radiation_fct_pt )(const double &time, double &solar_flux_magnitude, Vector< double > &solar_flux_unit_vector, double &total_diffuse_radiation) |
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unsigned | Melt_id |
| Id of additional unknowns (Lagrange multiplier ("pressure") and melt rate) More...
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double * | Melt_temperature_pt |
| Pointer to non-default melt temperature. More...
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MacroElement * | Undeformed_macro_elem_pt |
| Pointer to the element's "undeformed" macro element (NULL by default) More...
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SolidInitialCondition * | Solid_ic_pt |
| Pointer to object that specifies the initial condition. More...
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bool | Solve_for_consistent_newmark_accel_flag |
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static const unsigned | Default_Initial_Nvalue = 0 |
| Default value for the number of values at a node. More...
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static const double | Node_location_tolerance = 1.0e-14 |
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static const unsigned | N2deriv [] = {0, 1, 3, 6} |
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static DenseMatrix< double > | Dummy_matrix |
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static std::deque< double * > | Dof_pt_deque |
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