oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT > Class Template Reference

#include <multi_domain_boussinesq_elements.h>

+ Inheritance diagram for oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >:

Public Member Functions

 RefineableNavierStokesBoussinesqElement ()
 
const doublera () const
 Access function for the Rayleigh number (const version) More...
 
double *& ra_pt ()
 Access function for the pointer to the Rayleigh number. More...
 
void further_build ()
 
void get_body_force_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &body_force)
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 Compute the element's residual vector and the Jacobian matrix. More...
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
void get_dbody_force_nst_dexternal_element_data (const unsigned &ipt, DenseMatrix< double > &result, Vector< unsigned > &global_eqn_number)
 
void fill_in_off_diagonal_block_analytic (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const
 Classify dof numbers as in underlying element. More...
 
unsigned ndof_types () const
 Get number of dof types from underlying element. More...
 
- Public Member Functions inherited from oomph::ElementWithExternalElement
 ElementWithExternalElement ()
 
virtual ~ElementWithExternalElement ()
 The destructor, clean up any allocated memory. More...
 
 ElementWithExternalElement (const ElementWithExternalElement &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithExternalElement &)=delete
 Broken assignment operator. More...
 
bool storage_has_been_allocated () const
 Helper function to check if storage has actually been allocated. More...
 
FiniteElement *& external_element_pt (const unsigned &interaction_index, const unsigned &ipt)
 
FiniteElement *const & external_element_pt (const unsigned &interaction_index, const unsigned &ipt) const
 Access function to source element, const version. More...
 
Vector< double > & external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt)
 
Vector< double > const & external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt) const
 Access function to get source element's coords, const version. More...
 
void output_external_elements (std::ostream &outfile, const unsigned &interaction_index)
 
void initialise_external_element_storage ()
 
void flush_all_external_element_storage ()
 Flush the storage for external elements. More...
 
void set_ninteraction (const unsigned &n_interaction)
 
unsigned ninteraction () const
 Return the number of interactions in the element. More...
 
virtual void identify_all_field_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< std::pair< Data *, unsigned >> &paired_interaction_data)
 
virtual void identify_all_geometric_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< Data * > &external_geometric_data_pt)
 
unsigned nexternal_interaction_field_data () const
 
Vector< Data * > external_interaction_field_data_pt () const
 
unsigned nexternal_interaction_geometric_data () const
 
bool add_external_geometric_data ()
 Are we including external geometric data in the element's Jacobian. More...
 
bool add_external_interaction_data ()
 Are we including external data in the element's Jacobian. More...
 
Vector< Data * > external_interaction_geometric_data_pt () const
 
void ignore_external_geometric_data ()
 
void ignore_external_interaction_data ()
 
void include_external_geometric_data ()
 
void include_external_interaction_data ()
 
bool external_geometric_data_is_included () const
 
void describe_local_dofs (std::ostream &out, const std::string &curr_string) const
 
- Public Member Functions inherited from oomph::FiniteElement
void set_dimension (const unsigned &dim)
 
void set_nodal_dimension (const unsigned &nodal_dim)
 
void set_nnodal_position_type (const unsigned &nposition_type)
 Set the number of types required to interpolate the coordinate. More...
 
void set_n_node (const unsigned &n)
 
int nodal_local_eqn (const unsigned &n, const unsigned &i) const
 
double dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const
 
 FiniteElement ()
 Constructor. More...
 
virtual ~FiniteElement ()
 
 FiniteElement (const FiniteElement &)=delete
 Broken copy constructor. More...
 
virtual bool local_coord_is_valid (const Vector< double > &s)
 Broken assignment operator. More...
 
virtual void move_local_coord_back_into_element (Vector< double > &s) const
 
void get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const
 
virtual void local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
 
virtual void local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
 
virtual double local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt)
 
MacroElementmacro_elem_pt ()
 Access function to pointer to macro element. More...
 
void get_x (const Vector< double > &s, Vector< double > &x) const
 
void get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const
 
virtual void get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void set_integration_scheme (Integral *const &integral_pt)
 Set the spatial integration scheme. More...
 
Integral *const & integral_pt () const
 Return the pointer to the integration scheme (const version) More...
 
virtual void shape (const Vector< double > &s, Shape &psi) const =0
 
virtual void shape_at_knot (const unsigned &ipt, Shape &psi) const
 
virtual void dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
 
virtual void dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const
 
virtual void d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual void d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual double J_eulerian (const Vector< double > &s) const
 
virtual double J_eulerian_at_knot (const unsigned &ipt) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
void check_jacobian (const double &jacobian) const
 
double dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const
 
double d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual double d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual void assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const
 
virtual void assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)
 
Node *& node_pt (const unsigned &n)
 Return a pointer to the local node n. More...
 
Node *const & node_pt (const unsigned &n) const
 Return a pointer to the local node n (const version) More...
 
unsigned nnode () const
 Return the number of nodes. More...
 
virtual unsigned nnode_1d () const
 
double raw_nodal_position (const unsigned &n, const unsigned &i) const
 
double raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position (const unsigned &n, const unsigned &i) const
 
double nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double dnodal_position_dt (const unsigned &n, const unsigned &i) const
 Return the i-th component of nodal velocity: dx/dt at local node n. More...
 
double dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
virtual void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
virtual void disable_ALE ()
 
virtual void enable_ALE ()
 
virtual unsigned required_nvalue (const unsigned &n) const
 
unsigned nnodal_position_type () const
 
bool has_hanging_nodes () const
 
unsigned nodal_dimension () const
 Return the required Eulerian dimension of the nodes in this element. More...
 
virtual unsigned nvertex_node () const
 
virtual Nodevertex_node_pt (const unsigned &j) const
 
virtual Nodeconstruct_node (const unsigned &n)
 
virtual Nodeconstruct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
virtual Nodeconstruct_boundary_node (const unsigned &n)
 
virtual Nodeconstruct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
int get_node_number (Node *const &node_pt) const
 
virtual Nodeget_node_at_local_coordinate (const Vector< double > &s) const
 
double raw_nodal_value (const unsigned &n, const unsigned &i) const
 
double raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
unsigned dim () const
 
virtual ElementGeometry::ElementGeometry element_geometry () const
 Return the geometry type of the element (either Q or T usually). More...
 
virtual double interpolated_x (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated coordinate x[i] at local coordinate s. More...
 
virtual double interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual void interpolated_x (const Vector< double > &s, Vector< double > &x) const
 Return FE interpolated position x[] at local coordinate s as Vector. More...
 
virtual void interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const
 
virtual double interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)
 
virtual void interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)
 
unsigned ngeom_data () const
 
Datageom_data_pt (const unsigned &j)
 
void position (const Vector< double > &zeta, Vector< double > &r) const
 
void position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const
 
void dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)
 
virtual double zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const
 
void interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const
 
void locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)
 
virtual void node_update ()
 
virtual void identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)
 
virtual void identify_geometric_data (std::set< Data * > &geometric_data_pt)
 
virtual double s_min () const
 Min value of local coordinate. More...
 
virtual double s_max () const
 Max. value of local coordinate. More...
 
double size () const
 
virtual double compute_physical_size () const
 
virtual void point_output_data (const Vector< double > &s, Vector< double > &data)
 
void point_output (std::ostream &outfile, const Vector< double > &s)
 
virtual unsigned nplot_points_paraview (const unsigned &nplot) const
 
virtual unsigned nsub_elements_paraview (const unsigned &nplot) const
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const
 
virtual void write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const
 
virtual unsigned nscalar_paraview () const
 
virtual void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
virtual std::string scalar_name_paraview (const unsigned &i) const
 
virtual void output (std::ostream &outfile)
 
virtual void output (std::ostream &outfile, const unsigned &n_plot)
 
virtual void output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const
 
virtual void output (FILE *file_pt)
 
virtual void output (FILE *file_pt, const unsigned &n_plot)
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 Output an exact solution over the element. More...
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 Output a time-dependent exact solution over the element. More...
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
 Output a time-dependent exact solution over the element. More...
 
virtual void get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
 
virtual std::string tecplot_zone_string (const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const
 
virtual unsigned nplot_points (const unsigned &nplot) const
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 Calculate the norm of the error and that of the exact solution. More...
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)
 
void integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
 Integrate Vector-valued function over element. More...
 
void integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
 Integrate Vector-valued time-dep function over element. More...
 
virtual void build_face_element (const int &face_index, FaceElement *face_element_pt)
 
virtual unsigned self_test ()
 
virtual unsigned get_bulk_node_number (const int &face_index, const unsigned &i) const
 
virtual int face_outer_unit_normal_sign (const int &face_index) const
 Get the sign of the outer unit normal on the face given by face_index. More...
 
virtual unsigned nnode_on_face () const
 
void face_node_number_error_check (const unsigned &i) const
 Range check for face node numbers. More...
 
virtual CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt (const int &face_index) const
 
virtual BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt (const int &face_index) const
 
- Public Member Functions inherited from oomph::GeneralisedElement
 GeneralisedElement ()
 Constructor: Initialise all pointers and all values to zero. More...
 
virtual ~GeneralisedElement ()
 Virtual destructor to clean up any memory allocated by the object. More...
 
 GeneralisedElement (const GeneralisedElement &)=delete
 Broken copy constructor. More...
 
void operator= (const GeneralisedElement &)=delete
 Broken assignment operator. More...
 
Data *& internal_data_pt (const unsigned &i)
 Return a pointer to i-th internal data object. More...
 
Data *const & internal_data_pt (const unsigned &i) const
 Return a pointer to i-th internal data object (const version) More...
 
Data *& external_data_pt (const unsigned &i)
 Return a pointer to i-th external data object. More...
 
Data *const & external_data_pt (const unsigned &i) const
 Return a pointer to i-th external data object (const version) More...
 
unsigned long eqn_number (const unsigned &ieqn_local) const
 
int local_eqn_number (const unsigned long &ieqn_global) const
 
unsigned add_external_data (Data *const &data_pt, const bool &fd=true)
 
bool external_data_fd (const unsigned &i) const
 
void exclude_external_data_fd (const unsigned &i)
 
void include_external_data_fd (const unsigned &i)
 
void flush_external_data ()
 Flush all external data. More...
 
void flush_external_data (Data *const &data_pt)
 Flush the object addressed by data_pt from the external data array. More...
 
unsigned ninternal_data () const
 Return the number of internal data objects. More...
 
unsigned nexternal_data () const
 Return the number of external data objects. More...
 
unsigned ndof () const
 Return the number of equations/dofs in the element. More...
 
void dof_vector (const unsigned &t, Vector< double > &dof)
 Return the vector of dof values at time level t. More...
 
void dof_pt_vector (Vector< double * > &dof_pt)
 Return the vector of pointers to dof values. More...
 
void set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)
 
virtual void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void complete_setup_of_dependencies ()
 
virtual void get_residuals (Vector< double > &residuals)
 
virtual void get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
virtual void get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
virtual void get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
virtual void compute_norm (Vector< double > &norm)
 
virtual void compute_norm (double &norm)
 
- Public Member Functions inherited from oomph::GeomObject
 GeomObject ()
 Default constructor. More...
 
 GeomObject (const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)
 
 GeomObject (const GeomObject &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const GeomObject &)=delete
 Broken assignment operator. More...
 
virtual ~GeomObject ()
 (Empty) destructor More...
 
unsigned nlagrangian () const
 Access function to # of Lagrangian coordinates. More...
 
unsigned ndim () const
 Access function to # of Eulerian coordinates. More...
 
void set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
 Set # of Lagrangian and Eulerian coordinates. More...
 
TimeStepper *& time_stepper_pt ()
 
TimeSteppertime_stepper_pt () const
 
virtual void position (const double &t, const Vector< double > &zeta, Vector< double > &r) const
 
virtual void dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const
 
virtual void d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const
 
virtual void d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const
 

Private Attributes

doubleRa_pt
 Pointer to a private data member, the Rayleigh number. More...
 

Additional Inherited Members

- Public Types inherited from oomph::FiniteElement
typedef void(* SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)
 
typedef void(* UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)
 
- Static Public Attributes inherited from oomph::FiniteElement
static double Tolerance_for_singular_jacobian = 1.0e-16
 Tolerance below which the jacobian is considered singular. More...
 
static bool Accept_negative_jacobian = false
 
static bool Suppress_output_while_checking_for_inverted_elements
 
- Static Public Attributes inherited from oomph::GeneralisedElement
static bool Suppress_warning_about_repeated_internal_data
 
static bool Suppress_warning_about_repeated_external_data = true
 
static double Default_fd_jacobian_step = 1.0e-8
 
- Protected Member Functions inherited from oomph::ElementWithExternalElement
void assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)
 
void assign_external_interaction_data_local_eqn_numbers (const bool &store_local_dof_pt)
 
void fill_in_jacobian_from_external_interaction_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_by_fd (DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_field_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_field_by_fd (DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_geometric_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_geometric_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_external_interaction_field_fd ()
 
virtual void reset_after_external_interaction_field_fd ()
 
virtual void update_in_external_interaction_field_fd (const unsigned &i)
 
virtual void reset_in_external_interaction_field_fd (const unsigned &i)
 
virtual void update_before_external_interaction_geometric_fd ()
 
virtual void reset_after_external_interaction_geometric_fd ()
 
virtual void update_in_external_interaction_geometric_fd (const unsigned &i)
 
virtual void reset_in_external_interaction_geometric_fd (const unsigned &i)
 
- Protected Member Functions inherited from oomph::FiniteElement
virtual void assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const
 
virtual void assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const
 
virtual void assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const
 
template<unsigned DIM>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual void dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<unsigned DIM>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
virtual void d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<unsigned DIM>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
virtual void transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
void transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
virtual void transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
virtual void fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_nodal_fd ()
 
virtual void reset_after_nodal_fd ()
 
virtual void update_in_nodal_fd (const unsigned &i)
 
virtual void reset_in_nodal_fd (const unsigned &i)
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 One-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Two-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
- Protected Member Functions inherited from oomph::GeneralisedElement
unsigned add_internal_data (Data *const &data_pt, const bool &fd=true)
 
bool internal_data_fd (const unsigned &i) const
 
void exclude_internal_data_fd (const unsigned &i)
 
void include_internal_data_fd (const unsigned &i)
 
void clear_global_eqn_numbers ()
 
void add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)
 
virtual void assign_additional_local_eqn_numbers ()
 
int internal_local_eqn (const unsigned &i, const unsigned &j) const
 
int external_local_eqn (const unsigned &i, const unsigned &j)
 
virtual void fill_in_contribution_to_residuals (Vector< double > &residuals)
 
void fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
virtual void update_before_internal_fd ()
 
virtual void reset_after_internal_fd ()
 
virtual void update_in_internal_fd (const unsigned &i)
 
virtual void reset_in_internal_fd (const unsigned &i)
 
virtual void update_before_external_fd ()
 
virtual void reset_after_external_fd ()
 
virtual void update_in_external_fd (const unsigned &i)
 
virtual void reset_in_external_fd (const unsigned &i)
 
virtual void fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Protected Attributes inherited from oomph::ElementWithExternalElement
bool Add_external_interaction_data
 Boolean flag to indicate whether to include the external data. More...
 
bool Add_external_geometric_data
 Boolean flag to indicate whether to include the external geometric data. More...
 
Data ** External_interaction_field_data_pt
 
Data ** External_interaction_geometric_data_pt
 
- Protected Attributes inherited from oomph::FiniteElement
MacroElementMacro_elem_pt
 Pointer to the element's macro element (NULL by default) More...
 
- Protected Attributes inherited from oomph::GeomObject
unsigned NLagrangian
 Number of Lagrangian (intrinsic) coordinates. More...
 
unsigned Ndim
 Number of Eulerian coordinates. More...
 
TimeStepperGeom_object_time_stepper_pt
 
- Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned Default_Initial_Nvalue = 0
 Default value for the number of values at a node. More...
 
static const double Node_location_tolerance = 1.0e-14
 
static const unsigned N2deriv [] = {0, 1, 3, 6}
 
- Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< doubleDummy_matrix
 
static std::deque< double * > Dof_pt_deque
 

Detailed Description

template<class NST_ELEMENT, class AD_ELEMENT>
class oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >

////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////// Build a refineable Navier Stokes element that inherits from ElementWithExternalElement so that it can "communicate" with an advection diffusion element that provides the temperature in the body force term.

Constructor & Destructor Documentation

◆ RefineableNavierStokesBoussinesqElement()

Constructor: call the underlying constructors and initialise the pointer to the Rayleigh number to point to the default value of 0.0.

73  {
75 
76  // There is one interaction: The effect of the advection-diffusion
77  // element onto the buoyancy term
78  this->set_ninteraction(1);
79  }
void set_ninteraction(const unsigned &n_interaction)
Definition: element_with_external_element.h:178
ElementWithExternalElement()
Definition: element_with_external_element.h:60
double * Ra_pt
Pointer to a private data member, the Rayleigh number.
Definition: multi_domain_boussinesq_elements.h:360
double Default_Physical_Constant_Value
Default value for physical constants.
Definition: multi_domain_boussinesq_elements.h:48

References oomph::MultiDomainBoussinesqHelper::Default_Physical_Constant_Value, oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::Ra_pt, and oomph::ElementWithExternalElement::set_ninteraction().

Member Function Documentation

◆ fill_in_contribution_to_jacobian()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_contribution_to_jacobian ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inlinevirtual

Compute the element's residual vector and the Jacobian matrix.

Reimplemented from oomph::ElementWithExternalElement.

158  {
159  // Get the analytical contribution from the basic Navier-Stokes element
161 
162 #ifdef USE_FD_FOR_DERIVATIVES_WRT_EXTERNAL_DATA_IN_MULTI_DOMAIN_BOUSSINESQ
163 
164  // Get the off-diagonal terms by finite differencing
166  jacobian);
167 
168 #else
169 
170  // Get the off-diagonal terms analytically
171  this->fill_in_off_diagonal_block_analytic(residuals, jacobian);
172 
173 #endif
174  }
void fill_in_jacobian_from_external_interaction_by_fd(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: element_with_external_element.h:345
void fill_in_off_diagonal_block_analytic(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: multi_domain_boussinesq_elements.h:202
void fill_in_contribution_to_jacobian(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: gen_axisym_advection_diffusion_elements.h:536

References oomph::fill_in_contribution_to_jacobian(), oomph::ElementWithExternalElement::fill_in_jacobian_from_external_interaction_by_fd(), and oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_off_diagonal_block_analytic().

◆ fill_in_contribution_to_jacobian_and_mass_matrix()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_contribution_to_jacobian_and_mass_matrix ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian,
DenseMatrix< double > &  mass_matrix 
)
inlinevirtual

Add the element's contribution to its residuals vector, jacobian matrix and mass matrix

Reimplemented from oomph::GeneralisedElement.

183  {
184  // Call the standard (Broken) function
185  // which will prevent these elements from being used
186  // in eigenproblems until replaced.
188  residuals, jacobian, mass_matrix);
189  }
virtual void fill_in_contribution_to_jacobian_and_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
Definition: elements.cc:1322

References oomph::GeneralisedElement::fill_in_contribution_to_jacobian_and_mass_matrix().

◆ fill_in_off_diagonal_block_analytic()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_off_diagonal_block_analytic ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inline

Compute the contribution of the external degrees of freedom (temperatures) on the Navier-Stokes equations

204  {
205  // Local storage for the index in the nodes at which the
206  // Navier-Stokes velocities are stored (we know that this
207  // should be 0,1,2)
208  const unsigned n_dim = this->dim();
209  unsigned u_nodal_nst[n_dim];
210  for (unsigned i = 0; i < n_dim; i++)
211  {
212  u_nodal_nst[i] = this->u_index_nst(i);
213  }
214 
215  // Find out how many nodes there are
216  const unsigned n_node = this->nnode();
217 
218  // Set up memory for the shape and test functions and their derivatives
219  Shape psif(n_node), testf(n_node);
220  DShape dpsifdx(n_node, n_dim), dtestfdx(n_node, n_dim);
221 
222  // Number of integration points
223  const unsigned n_intpt = this->integral_pt()->nweight();
224 
225  // Integers to store the local equations and unknowns
226  int local_eqn = 0, local_unknown = 0;
227 
228  // Local storage for pointers to hang_info objects
229  HangInfo* hang_info_pt = 0;
230 
231  // Loop over the integration points
232  for (unsigned ipt = 0; ipt < n_intpt; ipt++)
233  {
234  // Get the integral weight
235  double w = this->integral_pt()->weight(ipt);
236 
237  // Call the derivatives of the shape and test functions
238  double J = this->dshape_and_dtest_eulerian_at_knot_nst(
239  ipt, psif, dpsifdx, testf, dtestfdx);
240 
241  // Premultiply the weights and the Jacobian
242  double W = w * J;
243 
244  // Assemble the jacobian terms
245 
246  // Get the derivatives of the body force wrt the unknowns
247  // of the external element
248  DenseMatrix<double> dbody_dexternal_element_data;
249 
250  // Vector of global equation number corresponding to the external
251  // element's data
252  Vector<unsigned> global_eqn_number_of_external_element_data;
253 
254  // Get the appropriate derivatives
256  ipt,
257  dbody_dexternal_element_data,
258  global_eqn_number_of_external_element_data);
259 
260  // Find out how many external data there are
261  const unsigned n_external_element_data =
262  global_eqn_number_of_external_element_data.size();
263 
264  // Loop over the test functions
265  for (unsigned l = 0; l < n_node; l++)
266  {
267  // Assemble the contributions of the temperature to
268  // the Navier--Stokes equations (which arise through the buoyancy
269  // body-force term)
270  unsigned n_master = 1;
271  double hang_weight = 1.0;
272 
273  // Local bool (is the node hanging)
274  bool is_node_hanging = this->node_pt(l)->is_hanging();
275 
276  // If the node is hanging, get the number of master nodes
277  if (is_node_hanging)
278  {
279  hang_info_pt = this->node_pt(l)->hanging_pt();
280  n_master = hang_info_pt->nmaster();
281  }
282  // Otherwise there is just one master node, the node itself
283  else
284  {
285  n_master = 1;
286  }
287 
288  // Loop over the master nodes
289  for (unsigned m = 0; m < n_master; m++)
290  {
291  // If the node is hanging get weight from master node
292  if (is_node_hanging)
293  {
294  // Get the hang weight from the master node
295  hang_weight = hang_info_pt->master_weight(m);
296  }
297  else
298  {
299  // Node contributes with full weight
300  hang_weight = 1.0;
301  }
302 
303 
304  // Loop over the velocity components in the Navier--Stokes equtions
305  for (unsigned i = 0; i < n_dim; i++)
306  {
307  // Get the equation number
308  if (is_node_hanging)
309  {
310  // Get the equation number from the master node
311  local_eqn = this->local_hang_eqn(
312  hang_info_pt->master_node_pt(m), u_nodal_nst[i]);
313  }
314  else
315  {
316  // Local equation number
317  local_eqn = this->nodal_local_eqn(l, u_nodal_nst[i]);
318  }
319 
320  if (local_eqn >= 0)
321  {
322  // Loop over the external data
323  for (unsigned l2 = 0; l2 < n_external_element_data; l2++)
324  {
325  // Find the local equation number corresponding to the global
326  // unknown
327  local_unknown = this->local_eqn_number(
328  global_eqn_number_of_external_element_data[l2]);
329  if (local_unknown >= 0)
330  {
331  // Add contribution to jacobian matrix
332  jacobian(local_eqn, local_unknown) +=
333  dbody_dexternal_element_data(i, l2) * testf(l) *
334  hang_weight * W;
335  }
336  }
337  }
338  }
339  }
340  }
341  }
342  }
int i
Definition: BiCGSTAB_step_by_step.cpp:9
JacobiRotation< float > J
Definition: Jacobi_makeJacobi.cpp:3
RowVector3d w
Definition: Matrix_resize_int.cpp:3
Node *& node_pt(const unsigned &n)
Return a pointer to the local node n.
Definition: elements.h:2175
int nodal_local_eqn(const unsigned &n, const unsigned &i) const
Definition: elements.h:1432
unsigned dim() const
Definition: elements.h:2611
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2210
Integral *const & integral_pt() const
Return the pointer to the integration scheme (const version)
Definition: elements.h:1963
int local_eqn_number(const unsigned long &ieqn_global) const
Definition: elements.h:726
virtual unsigned nweight() const =0
Return the number of integration points of the scheme.
virtual double weight(const unsigned &i) const =0
Return weight of i-th integration point.
HangInfo *const & hanging_pt() const
Definition: nodes.h:1228
bool is_hanging() const
Test whether the node is geometrically hanging.
Definition: nodes.h:1285
void get_dbody_force_nst_dexternal_element_data(const unsigned &ipt, DenseMatrix< double > &result, Vector< unsigned > &global_eqn_number)
Definition: multi_domain_boussinesq_elements.h:1435
int * m
Definition: level2_cplx_impl.h:294
@ W
Definition: quadtree.h:63

References oomph::FiniteElement::dim(), oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::get_dbody_force_nst_dexternal_element_data(), oomph::Node::hanging_pt(), i, oomph::FiniteElement::integral_pt(), oomph::Node::is_hanging(), J, oomph::GeneralisedElement::local_eqn_number(), m, oomph::HangInfo::master_node_pt(), oomph::HangInfo::master_weight(), oomph::HangInfo::nmaster(), oomph::FiniteElement::nnode(), oomph::FiniteElement::nodal_local_eqn(), oomph::FiniteElement::node_pt(), oomph::Integral::nweight(), w, oomph::QuadTreeNames::W, and oomph::Integral::weight().

Referenced by oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_contribution_to_jacobian().

◆ further_build()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::further_build ( )
inline

Call the underlying single-physics element's further_build() functions and make sure that the pointer to the Rayleigh number is passed to the sons. Also make sure that if the external geometric Data was ignored in the father it's also ignored in the sons

98  {
99  NST_ELEMENT::further_build();
100 
101  // Cast the pointer to the father element to the specific
102  // element type
103  RefineableNavierStokesBoussinesqElement<NST_ELEMENT, AD_ELEMENT>*
104  cast_father_element_pt = dynamic_cast<
105  RefineableNavierStokesBoussinesqElement<NST_ELEMENT, AD_ELEMENT>*>(
106  this->father_element_pt());
107 
108  // Set the pointer to the Rayleigh number to be the same as that in
109  // the father
110  this->Ra_pt = cast_father_element_pt->ra_pt();
111 
112  // Retain ignorance about external geometric data...
113  if (!cast_father_element_pt->external_geometric_data_is_included())
114  {
116  }
117  }
void ignore_external_geometric_data()
Definition: element_with_external_element.h:271

References oomph::ElementWithExternalElement::external_geometric_data_is_included(), oomph::ElementWithExternalElement::ignore_external_geometric_data(), oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::ra_pt(), and oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::Ra_pt.

◆ get_body_force_nst()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::get_body_force_nst ( const double time,
const unsigned ipt,
const Vector< double > &  s,
const Vector< double > &  x,
Vector< double > &  body_force 
)
inline

Overload get_body_force_nst() to return the temperature-dependent buoyancy force, using the temperature computed by the "external" advection diffusion element associated with integration point ipt.

128  {
129  // Set interaction index -- there's only one interaction...
130  const unsigned interaction = 0;
131 
132  // Get a pointer to the external element that computes the
133  // the temperature -- we know it's an advection diffusion element.
134  const AD_ELEMENT* adv_diff_el_pt =
135  dynamic_cast<AD_ELEMENT*>(external_element_pt(interaction, ipt));
136 
137  // Get the temperature interpolated from the external element
138  const double interpolated_t = adv_diff_el_pt->interpolated_u_adv_diff(
139  external_element_local_coord(interaction, ipt));
140 
141  // Get vector that indicates the direction of gravity from
142  // the Navier-Stokes equations
143  Vector<double> gravity(NST_ELEMENT::g());
144 
145  // Set the temperature-dependent body force:
146  const unsigned n_dim = this->dim();
147  for (unsigned i = 0; i < n_dim; i++)
148  {
149  body_force[i] = -gravity[i] * interpolated_t * ra();
150  }
151 
152  } // end overloaded body force
Vector< double > & external_element_local_coord(const unsigned &interaction_index, const unsigned &ipt)
Definition: element_with_external_element.h:136
FiniteElement *& external_element_pt(const unsigned &interaction_index, const unsigned &ipt)
Definition: element_with_external_element.h:107
const double & ra() const
Access function for the Rayleigh number (const version)
Definition: multi_domain_boussinesq_elements.h:82
void body_force(const double &time, const Vector< double > &x, Vector< double > &result)
Definition: axisym_linear_elasticity/cylinder/cylinder.cc:96
void gravity(const double &t, const Vector< double > &xi, Vector< double > &b)
Definition: ConstraintElementsUnitTest.cpp:20
Definition: MortaringCantileverCompareToNonMortaring.cpp:176

References Global_Parameters::body_force(), oomph::FiniteElement::dim(), oomph::ElementWithExternalElement::external_element_local_coord(), oomph::ElementWithExternalElement::external_element_pt(), Gravity::gravity(), i, and oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::ra().

◆ get_dbody_force_nst_dexternal_element_data()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::get_dbody_force_nst_dexternal_element_data ( const unsigned ipt,
DenseMatrix< double > &  result,
Vector< unsigned > &  global_eqn_number 
)

Fill in the derivatives of the body force with respect to the external unknowns

Fill in the derivatives of the body force with respect to the external unknowns in the Navier–Stokes equations

1439  {
1440  // Get vector that indicates the direction of gravity from
1441  // the Navier-Stokes equations
1442  Vector<double> gravity(NST_ELEMENT::g());
1443 
1444  // The interaction index is 0 in this case
1445  unsigned interaction = 0;
1446 
1447  // Get the external element's derivatives
1448  Vector<double> du_adv_diff_ddata;
1449 
1450  // Dynamic cast "other" element to correct type
1451  AD_ELEMENT* source_el_pt =
1452  dynamic_cast<AD_ELEMENT*>(external_element_pt(interaction, ipt));
1453 #ifdef PARANOID
1454  if (source_el_pt == 0)
1455  {
1456  throw OomphLibError("External element could not be cast to AD_ELEMENT\n",
1459  }
1460 #endif
1461 
1462  // Get derivatives
1463  source_el_pt->dinterpolated_u_adv_diff_ddata(
1464  external_element_local_coord(interaction, ipt),
1465  du_adv_diff_ddata,
1466  global_eqn_number);
1467 
1468  // Find the number of external data
1469  unsigned n_external_element_data = du_adv_diff_ddata.size();
1470 
1471  // Set the size of the matrix to be returned
1472  const unsigned n_dim = this->dim();
1473  result.resize(n_dim, n_external_element_data);
1474 
1475  // Temperature-dependent body force:
1476  for (unsigned i = 0; i < n_dim; i++)
1477  {
1478  // Loop over the external data
1479  for (unsigned n = 0; n < n_external_element_data; n++)
1480  {
1481  result(i, n) = -gravity[i] * du_adv_diff_ddata[n] * ra();
1482  }
1483  }
1484 
1485  } // end_of_get_dbody_force
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
void resize(const unsigned long &n)
Definition: matrices.h:498
#define OOMPH_EXCEPTION_LOCATION
Definition: oomph_definitions.h:61
#define OOMPH_CURRENT_FUNCTION
Definition: oomph_definitions.h:86

References Gravity::gravity(), i, n, OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION, and oomph::DenseMatrix< T >::resize().

Referenced by oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::fill_in_off_diagonal_block_analytic().

◆ get_dof_numbers_for_unknowns()

template<class NST_ELEMENT , class AD_ELEMENT >
void oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::get_dof_numbers_for_unknowns ( std::list< std::pair< unsigned long, unsigned >> &  dof_lookup_list) const
inlinevirtual

Classify dof numbers as in underlying element.

Reimplemented from oomph::GeneralisedElement.

347  {
348  // Call the underlying function
349  NST_ELEMENT::get_dof_numbers_for_unknowns(dof_lookup_list);
350  }

◆ ndof_types()

template<class NST_ELEMENT , class AD_ELEMENT >
unsigned oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::ndof_types ( ) const
inlinevirtual

Get number of dof types from underlying element.

Reimplemented from oomph::GeneralisedElement.

354  {
355  return NST_ELEMENT::ndof_types();
356  }

◆ ra()

template<class NST_ELEMENT , class AD_ELEMENT >
const double& oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::ra ( ) const
inline

◆ ra_pt()

template<class NST_ELEMENT , class AD_ELEMENT >
double*& oomph::RefineableNavierStokesBoussinesqElement< NST_ELEMENT, AD_ELEMENT >::ra_pt ( )
inline

Member Data Documentation

◆ Ra_pt


The documentation for this class was generated from the following file: