ScatteringProblem< ELEMENT > Class Template Reference

Problem class to compute scattering of planar wave from unit disk. More...

+ Inheritance diagram for ScatteringProblem< ELEMENT >:

Public Member Functions

 ScatteringProblem ()
 Constructor. More...
 
 ~ScatteringProblem ()
 Destructor (empty) More...
 
void doc_solution (DocInfo &doc_info)
 Doc the solution: doc_info contains labels/output directory etc. More...
 
void actions_before_newton_solve ()
 Update the problem specs before solve (empty) More...
 
void actions_after_newton_solve ()
 Update the problem specs after solve (empty) More...
 
void actions_before_newton_convergence_check ()
 Recompute gamma integral before checking Newton residuals. More...
 
void actions_before_adapt ()
 Actions before adapt: Wipe the mesh of prescribed flux elements. More...
 
void actions_after_adapt ()
 Actions after adapt: Rebuild the mesh of prescribed flux elements. More...
 
void create_outer_bc_elements (const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_outer_boundary_mesh_pt)
 
void create_flux_elements (const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_inner_boundary_mesh_pt)
 
void delete_face_elements (Mesh *const &boundary_mesh_pt)
 Delete boundary face elements and wipe the surface mesh. More...
 
void set_prescribed_incoming_flux_pt ()
 
void setup_outer_boundary ()
 Set up boundary condition elements on outer boundary. More...
 
 ScatteringProblem ()
 Constructor. More...
 
 ~ScatteringProblem ()
 Destructor (empty) More...
 
void doc_solution (DocInfo &doc_info)
 
void actions_before_newton_solve ()
 Update the problem specs before solve (empty) More...
 
void actions_after_newton_solve ()
 Update the problem specs after solve (empty) More...
 
void actions_before_newton_convergence_check ()
 Recompute gamma integral before checking Newton residuals. More...
 
void actions_before_adapt ()
 Actions before adapt: Wipe the mesh of prescribed flux elements. More...
 
void actions_after_adapt ()
 Actions after adapt: Rebuild the mesh of prescribed flux elements. More...
 
void create_outer_bc_elements (const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_outer_boundary_mesh_pt)
 
void create_flux_elements (const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_inner_boundary_mesh_pt)
 
void delete_face_elements (Mesh *const &boundary_mesh_pt)
 Delete boundary face elements and wipe the surface mesh. More...
 
void set_prescribed_incoming_flux_pt ()
 
void setup_outer_boundary ()
 Set up boundary condition elements on outer boundary. More...
 
 ScatteringProblem ()
 Constructor. More...
 
 ~ScatteringProblem ()
 Destructor (empty) More...
 
void doc_solution (DocInfo &doc_info)
 
void actions_before_newton_solve ()
 Update the problem specs before solve (empty) More...
 
void actions_after_newton_solve ()
 Update the problem specs after solve (empty) More...
 
void actions_before_newton_convergence_check ()
 Recompute gamma integral before checking Newton residuals. More...
 
void actions_before_adapt ()
 Actions before adapt: Wipe the mesh of prescribed flux elements. More...
 
void actions_after_adapt ()
 Actions after adapt: Rebuild the mesh of prescribed flux elements. More...
 
void create_outer_bc_elements (const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_outer_boundary_mesh_pt)
 
void create_flux_elements (const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_inner_boundary_mesh_pt)
 
void delete_face_elements (Mesh *const &boundary_mesh_pt)
 Delete boundary face elements and wipe the surface mesh. More...
 
void set_prescribed_incoming_flux_pt ()
 
void setup_outer_boundary ()
 Set up boundary condition elements on outer boundary. More...
 
- Public Member Functions inherited from oomph::Problem
virtual void debug_hook_fct (const unsigned &i)
 
void set_analytic_dparameter (double *const &parameter_pt)
 
void unset_analytic_dparameter (double *const &parameter_pt)
 
bool is_dparameter_calculated_analytically (double *const &parameter_pt)
 
void set_analytic_hessian_products ()
 
void unset_analytic_hessian_products ()
 
bool are_hessian_products_calculated_analytically ()
 
void set_pinned_values_to_zero ()
 
bool distributed () const
 
OomphCommunicator * communicator_pt ()
 access function to the oomph-lib communicator More...
 
const OomphCommunicator * communicator_pt () const
 access function to the oomph-lib communicator, const version More...
 
 Problem ()
 
 Problem (const Problem &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const Problem &)=delete
 Broken assignment operator. More...
 
virtual ~Problem ()
 Virtual destructor to clean up memory. More...
 
Mesh *& mesh_pt ()
 Return a pointer to the global mesh. More...
 
Mesh *const & mesh_pt () const
 Return a pointer to the global mesh (const version) More...
 
Mesh *& mesh_pt (const unsigned &imesh)
 
Mesh *const & mesh_pt (const unsigned &imesh) const
 Return a pointer to the i-th submesh (const version) More...
 
unsigned nsub_mesh () const
 Return number of submeshes. More...
 
unsigned add_sub_mesh (Mesh *const &mesh_pt)
 
void flush_sub_meshes ()
 
void build_global_mesh ()
 
void rebuild_global_mesh ()
 
LinearSolver *& linear_solver_pt ()
 Return a pointer to the linear solver object. More...
 
LinearSolver *const & linear_solver_pt () const
 Return a pointer to the linear solver object (const version) More...
 
LinearSolver *& mass_matrix_solver_for_explicit_timestepper_pt ()
 
LinearSolver * mass_matrix_solver_for_explicit_timestepper_pt () const
 
EigenSolver *& eigen_solver_pt ()
 Return a pointer to the eigen solver object. More...
 
EigenSolver *const & eigen_solver_pt () const
 Return a pointer to the eigen solver object (const version) More...
 
Time *& time_pt ()
 Return a pointer to the global time object. More...
 
Time * time_pt () const
 Return a pointer to the global time object (const version). More...
 
double & time ()
 Return the current value of continuous time. More...
 
double time () const
 Return the current value of continuous time (const version) More...
 
TimeStepper *& time_stepper_pt ()
 
const TimeStepper * time_stepper_pt () const
 
TimeStepper *& time_stepper_pt (const unsigned &i)
 Return a pointer to the i-th timestepper. More...
 
ExplicitTimeStepper *& explicit_time_stepper_pt ()
 Return a pointer to the explicit timestepper. More...
 
unsigned long set_timestepper_for_all_data (TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data=false)
 
virtual void shift_time_values ()
 Shift all values along to prepare for next timestep. More...
 
AssemblyHandler *& assembly_handler_pt ()
 Return a pointer to the assembly handler object. More...
 
AssemblyHandler *const & assembly_handler_pt () const
 Return a pointer to the assembly handler object (const version) More...
 
double & minimum_dt ()
 Access function to min timestep in adaptive timestepping. More...
 
double & maximum_dt ()
 Access function to max timestep in adaptive timestepping. More...
 
unsigned & max_newton_iterations ()
 Access function to max Newton iterations before giving up. More...
 
void problem_is_nonlinear (const bool &prob_lin)
 Access function to Problem_is_nonlinear. More...
 
double & max_residuals ()
 
bool & time_adaptive_newton_crash_on_solve_fail ()
 Access function for Time_adaptive_newton_crash_on_solve_fail. More...
 
double & newton_solver_tolerance ()
 
void add_time_stepper_pt (TimeStepper *const &time_stepper_pt)
 
void set_explicit_time_stepper_pt (ExplicitTimeStepper *const &explicit_time_stepper_pt)
 
void initialise_dt (const double &dt)
 
void initialise_dt (const Vector< double > &dt)
 
Data *& global_data_pt (const unsigned &i)
 Return a pointer to the the i-th global data object. More...
 
void add_global_data (Data *const &global_data_pt)
 
void flush_global_data ()
 
LinearAlgebraDistribution *const & dof_distribution_pt () const
 Return the pointer to the dof distribution (read-only) More...
 
unsigned long ndof () const
 Return the number of dofs. More...
 
unsigned ntime_stepper () const
 Return the number of time steppers. More...
 
unsigned nglobal_data () const
 Return the number of global data values. More...
 
unsigned self_test ()
 Self-test: Check meshes and global data. Return 0 for OK. More...
 
void enable_store_local_dof_pt_in_elements ()
 
void disable_store_local_dof_pt_in_elements ()
 
unsigned long assign_eqn_numbers (const bool &assign_local_eqn_numbers=true)
 
void describe_dofs (std::ostream &out= *(oomph_info.stream_pt())) const
 
void enable_discontinuous_formulation ()
 
void disable_discontinuous_formulation ()
 
void get_dofs (DoubleVector &dofs) const
 
void get_dofs (const unsigned &t, DoubleVector &dofs) const
 Return vector of the t'th history value of all dofs. More...
 
void set_dofs (const DoubleVector &dofs)
 Set the values of the dofs. More...
 
void set_dofs (const unsigned &t, DoubleVector &dofs)
 Set the history values of the dofs. More...
 
void set_dofs (const unsigned &t, Vector< double * > &dof_pt)
 
void add_to_dofs (const double &lambda, const DoubleVector &increment_dofs)
 Add lambda x incremenet_dofs[l] to the l-th dof. More...
 
double * global_dof_pt (const unsigned &i)
 
double & dof (const unsigned &i)
 i-th dof in the problem More...
 
double dof (const unsigned &i) const
 i-th dof in the problem (const version) More...
 
double *& dof_pt (const unsigned &i)
 Pointer to i-th dof in the problem. More...
 
double * dof_pt (const unsigned &i) const
 Pointer to i-th dof in the problem (const version) More...
 
virtual void get_inverse_mass_matrix_times_residuals (DoubleVector &Mres)
 
virtual void get_dvaluesdt (DoubleVector &f)
 
virtual void get_residuals (DoubleVector &residuals)
 Get the total residuals Vector for the problem. More...
 
virtual void get_jacobian (DoubleVector &residuals, DenseDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, CRDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, CCDoubleMatrix &jacobian)
 
virtual void get_jacobian (DoubleVector &residuals, SumOfMatrices &jacobian)
 
void get_fd_jacobian (DoubleVector &residuals, DenseMatrix< double > &jacobian)
 Get the full Jacobian by finite differencing. More...
 
void get_derivative_wrt_global_parameter (double *const &parameter_pt, DoubleVector &result)
 
void get_hessian_vector_products (DoubleVectorWithHaloEntries const &Y, Vector< DoubleVectorWithHaloEntries > const &C, Vector< DoubleVectorWithHaloEntries > &product)
 
void solve_eigenproblem (const unsigned &n_eval, Vector< std::complex< double >> &eigenvalue, Vector< DoubleVector > &eigenvector, const bool &steady=true)
 Solve the eigenproblem. More...
 
void solve_eigenproblem (const unsigned &n_eval, Vector< std::complex< double >> &eigenvalue, const bool &steady=true)
 
virtual void get_eigenproblem_matrices (CRDoubleMatrix &mass_matrix, CRDoubleMatrix &main_matrix, const double &shift=0.0)
 
void assign_eigenvector_to_dofs (DoubleVector &eigenvector)
 Assign the eigenvector passed to the function to the dofs. More...
 
void add_eigenvector_to_dofs (const double &epsilon, const DoubleVector &eigenvector)
 
void store_current_dof_values ()
 Store the current values of the degrees of freedom. More...
 
void restore_dof_values ()
 Restore the stored values of the degrees of freedom. More...
 
void enable_jacobian_reuse ()
 
void disable_jacobian_reuse ()
 Disable recycling of Jacobian in Newton iteration. More...
 
bool jacobian_reuse_is_enabled ()
 Is recycling of Jacobian in Newton iteration enabled? More...
 
bool & use_predictor_values_as_initial_guess ()
 
void newton_solve ()
 Use Newton method to solve the problem. More...
 
void enable_globally_convergent_newton_method ()
 enable globally convergent Newton method More...
 
void disable_globally_convergent_newton_method ()
 disable globally convergent Newton method More...
 
void newton_solve (unsigned const &max_adapt)
 
void steady_newton_solve (unsigned const &max_adapt=0)
 
void copy (Problem *orig_problem_pt)
 
virtual Problem * make_copy ()
 
virtual void read (std::ifstream &restart_file, bool &unsteady_restart)
 
virtual void read (std::ifstream &restart_file)
 
virtual void dump (std::ofstream &dump_file) const
 
void dump (const std::string &dump_file_name) const
 
void delete_all_external_storage ()
 
virtual void symmetrise_eigenfunction_for_adaptive_pitchfork_tracking ()
 
double * bifurcation_parameter_pt () const
 
void get_bifurcation_eigenfunction (Vector< DoubleVector > &eigenfunction)
 
void activate_fold_tracking (double *const &parameter_pt, const bool &block_solve=true)
 
void activate_bifurcation_tracking (double *const &parameter_pt, const DoubleVector &eigenvector, const bool &block_solve=true)
 
void activate_bifurcation_tracking (double *const &parameter_pt, const DoubleVector &eigenvector, const DoubleVector &normalisation, const bool &block_solve=true)
 
void activate_pitchfork_tracking (double *const &parameter_pt, const DoubleVector &symmetry_vector, const bool &block_solve=true)
 
void activate_hopf_tracking (double *const &parameter_pt, const bool &block_solve=true)
 
void activate_hopf_tracking (double *const &parameter_pt, const double &omega, const DoubleVector &null_real, const DoubleVector &null_imag, const bool &block_solve=true)
 
void deactivate_bifurcation_tracking ()
 
void reset_assembly_handler_to_default ()
 Reset the system to the standard non-augemented state. More...
 
double arc_length_step_solve (double *const &parameter_pt, const double &ds, const unsigned &max_adapt=0)
 
double arc_length_step_solve (Data *const &data_pt, const unsigned &data_index, const double &ds, const unsigned &max_adapt=0)
 
void reset_arc_length_parameters ()
 
int & sign_of_jacobian ()
 
void explicit_timestep (const double &dt, const bool &shift_values=true)
 Take an explicit timestep of size dt. More...
 
void unsteady_newton_solve (const double &dt)
 
void unsteady_newton_solve (const double &dt, const bool &shift_values)
 
void unsteady_newton_solve (const double &dt, const unsigned &max_adapt, const bool &first, const bool &shift=true)
 
double doubly_adaptive_unsteady_newton_solve (const double &dt, const double &epsilon, const unsigned &max_adapt, const bool &first, const bool &shift=true)
 
double doubly_adaptive_unsteady_newton_solve (const double &dt, const double &epsilon, const unsigned &max_adapt, const unsigned &suppress_resolve_after_spatial_adapt_flag, const bool &first, const bool &shift=true)
 
double adaptive_unsteady_newton_solve (const double &dt_desired, const double &epsilon)
 
double adaptive_unsteady_newton_solve (const double &dt_desired, const double &epsilon, const bool &shift_values)
 
void assign_initial_values_impulsive ()
 
void assign_initial_values_impulsive (const double &dt)
 
void calculate_predictions ()
 Calculate predictions. More...
 
void enable_mass_matrix_reuse ()
 
void disable_mass_matrix_reuse ()
 
bool mass_matrix_reuse_is_enabled ()
 Return whether the mass matrix is being reused. More...
 
void refine_uniformly (const Vector< unsigned > &nrefine_for_mesh)
 
void refine_uniformly (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh)
 
void refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void refine_uniformly (DocInfo &doc_info)
 
void refine_uniformly_and_prune (DocInfo &doc_info)
 
void refine_uniformly ()
 
void refine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform refinement for submesh i_mesh with documentation. More...
 
void refine_uniformly (const unsigned &i_mesh)
 Do uniform refinement for submesh i_mesh without documentation. More...
 
void p_refine_uniformly (const Vector< unsigned > &nrefine_for_mesh)
 
void p_refine_uniformly (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void p_refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh)
 
void p_refine_uniformly_and_prune (const Vector< unsigned > &nrefine_for_mesh, DocInfo &doc_info)
 
void p_refine_uniformly (DocInfo &doc_info)
 
void p_refine_uniformly_and_prune (DocInfo &doc_info)
 
void p_refine_uniformly ()
 
void p_refine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform p-refinement for submesh i_mesh with documentation. More...
 
void p_refine_uniformly (const unsigned &i_mesh)
 Do uniform p-refinement for submesh i_mesh without documentation. More...
 
void refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
void refine_selected_elements (const Vector< RefineableElement * > &elements_to_be_refined_pt)
 
void refine_selected_elements (const unsigned &i_mesh, const Vector< unsigned > &elements_to_be_refined)
 
void refine_selected_elements (const unsigned &i_mesh, const Vector< RefineableElement * > &elements_to_be_refined_pt)
 
void refine_selected_elements (const Vector< Vector< unsigned >> &elements_to_be_refined)
 
void refine_selected_elements (const Vector< Vector< RefineableElement * >> &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const Vector< unsigned > &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const unsigned &i_mesh, const Vector< unsigned > &elements_to_be_refined)
 
void p_refine_selected_elements (const unsigned &i_mesh, const Vector< PRefineableElement * > &elements_to_be_refined_pt)
 
void p_refine_selected_elements (const Vector< Vector< unsigned >> &elements_to_be_refined)
 
void p_refine_selected_elements (const Vector< Vector< PRefineableElement * >> &elements_to_be_refined_pt)
 
unsigned unrefine_uniformly ()
 
unsigned unrefine_uniformly (const unsigned &i_mesh)
 
void p_unrefine_uniformly (DocInfo &doc_info)
 
void p_unrefine_uniformly (const unsigned &i_mesh, DocInfo &doc_info)
 Do uniform p-unrefinement for submesh i_mesh without documentation. More...
 
void adapt (unsigned &n_refined, unsigned &n_unrefined)
 
void adapt ()
 
void p_adapt (unsigned &n_refined, unsigned &n_unrefined)
 
void p_adapt ()
 
void adapt_based_on_error_estimates (unsigned &n_refined, unsigned &n_unrefined, Vector< Vector< double >> &elemental_error)
 
void adapt_based_on_error_estimates (Vector< Vector< double >> &elemental_error)
 
void get_all_error_estimates (Vector< Vector< double >> &elemental_error)
 
void doc_errors (DocInfo &doc_info)
 Get max and min error for all elements in submeshes. More...
 
void doc_errors ()
 Get max and min error for all elements in submeshes. More...
 
void enable_info_in_newton_solve ()
 
void disable_info_in_newton_solve ()
 Disable the output of information when in the newton solver. More...
 
- Public Member Functions inherited from oomph::ExplicitTimeSteppableObject
 ExplicitTimeSteppableObject ()
 Empty constructor. More...
 
 ExplicitTimeSteppableObject (const ExplicitTimeSteppableObject &)=delete
 Broken copy constructor. More...
 
void operator= (const ExplicitTimeSteppableObject &)=delete
 Broken assignment operator. More...
 
virtual ~ExplicitTimeSteppableObject ()
 Empty destructor. More...
 
virtual void actions_before_explicit_stage ()
 
virtual void actions_after_explicit_stage ()
 

Public Attributes

TwoDAnnularMesh< ELEMENT > * Bulk_mesh_pt
 Pointer to the "bulk" mesh. More...
 
HelmholtzDtNMesh< ELEMENT > * Helmholtz_outer_boundary_mesh_pt
 
Mesh * Helmholtz_inner_boundary_mesh_pt
 
TriangleMesh< ELEMENT > * Bulk_mesh_pt
 Pointer to the "bulk" mesh. More...
 
ofstream Trace_file
 Trace file. More...
 
MESH * Bulk_mesh_pt
 Pointer to the "bulk" mesh. More...
 
- Public Attributes inherited from oomph::Problem
bool Shut_up_in_newton_solve
 

Additional Inherited Members

- Public Types inherited from oomph::Problem
typedef void(* SpatialErrorEstimatorFctPt) (Mesh *&mesh_pt, Vector< double > &elemental_error)
 Function pointer for spatial error estimator. More...
 
typedef void(* SpatialErrorEstimatorWithDocFctPt) (Mesh *&mesh_pt, Vector< double > &elemental_error, DocInfo &doc_info)
 Function pointer for spatial error estimator with doc. More...
 
- Static Public Attributes inherited from oomph::Problem
static bool Suppress_warning_about_actions_before_read_unstructured_meshes
 
- Protected Types inherited from oomph::Problem
enum  Assembly_method {
  Perform_assembly_using_vectors_of_pairs , Perform_assembly_using_two_vectors , Perform_assembly_using_maps , Perform_assembly_using_lists ,
  Perform_assembly_using_two_arrays
}
 Enumerated flags to determine which sparse assembly method is used. More...
 
- Protected Member Functions inherited from oomph::Problem
unsigned setup_element_count_per_dof ()
 
virtual void sparse_assemble_row_or_column_compressed (Vector< int * > &column_or_row_index, Vector< int * > &row_or_column_start, Vector< double * > &value, Vector< unsigned > &nnz, Vector< double * > &residual, bool compressed_row_flag)
 
virtual void actions_before_newton_step ()
 
virtual void actions_after_newton_step ()
 
virtual void actions_before_implicit_timestep ()
 
virtual void actions_after_implicit_timestep ()
 
virtual void actions_after_implicit_timestep_and_error_estimation ()
 
virtual void actions_before_explicit_timestep ()
 Actions that should be performed before each explicit time step. More...
 
virtual void actions_after_explicit_timestep ()
 Actions that should be performed after each explicit time step. More...
 
virtual void actions_before_read_unstructured_meshes ()
 
virtual void actions_after_read_unstructured_meshes ()
 
virtual void actions_after_change_in_global_parameter (double *const &parameter_pt)
 
virtual void actions_after_change_in_bifurcation_parameter ()
 
virtual void actions_after_parameter_increase (double *const &parameter_pt)
 
double & dof_derivative (const unsigned &i)
 
double & dof_current (const unsigned &i)
 
virtual void set_initial_condition ()
 
virtual double global_temporal_error_norm ()
 
unsigned newton_solve_continuation (double *const &parameter_pt)
 
unsigned newton_solve_continuation (double *const &parameter_pt, DoubleVector &z)
 
void calculate_continuation_derivatives (double *const &parameter_pt)
 
void calculate_continuation_derivatives (const DoubleVector &z)
 
void calculate_continuation_derivatives_fd (double *const &parameter_pt)
 
bool does_pointer_correspond_to_problem_data (double *const &parameter_pt)
 
void set_consistent_pinned_values_for_continuation ()
 
- Protected Attributes inherited from oomph::Problem
Vector< Problem * > Copy_of_problem_pt
 
std::map< double *, bool > Calculate_dparameter_analytic
 
bool Calculate_hessian_products_analytic
 
LinearAlgebraDistribution * Dof_distribution_pt
 
Vector< double * > Dof_pt
 Vector of pointers to dofs. More...
 
DoubleVectorWithHaloEntries Element_count_per_dof
 
double Relaxation_factor
 
double Newton_solver_tolerance
 
unsigned Max_newton_iterations
 Maximum number of Newton iterations. More...
 
unsigned Nnewton_iter_taken
 
Vector< double > Max_res
 Maximum residuals at start and after each newton iteration. More...
 
double Max_residuals
 
bool Time_adaptive_newton_crash_on_solve_fail
 
bool Jacobian_reuse_is_enabled
 Is re-use of Jacobian in Newton iteration enabled? Default: false. More...
 
bool Jacobian_has_been_computed
 
bool Problem_is_nonlinear
 
bool Pause_at_end_of_sparse_assembly
 
bool Doc_time_in_distribute
 
unsigned Sparse_assembly_method
 
unsigned Sparse_assemble_with_arrays_initial_allocation
 
unsigned Sparse_assemble_with_arrays_allocation_increment
 
Vector< Vector< unsigned > > Sparse_assemble_with_arrays_previous_allocation
 
double Numerical_zero_for_sparse_assembly
 
double FD_step_used_in_get_hessian_vector_products
 
bool Mass_matrix_reuse_is_enabled
 
bool Mass_matrix_has_been_computed
 
bool Discontinuous_element_formulation
 
double Minimum_dt
 Minimum desired dt: if dt falls below this value, exit. More...
 
double Maximum_dt
 Maximum desired dt. More...
 
double DTSF_max_increase
 
double DTSF_min_decrease
 
double Minimum_dt_but_still_proceed
 
bool Scale_arc_length
 Boolean to control whether arc-length should be scaled. More...
 
double Desired_proportion_of_arc_length
 Proportion of the arc-length to taken by the parameter. More...
 
double Theta_squared
 
int Sign_of_jacobian
 Storage for the sign of the global Jacobian. More...
 
double Continuation_direction
 
double Parameter_derivative
 Storage for the derivative of the global parameter wrt arc-length. More...
 
double Parameter_current
 Storage for the present value of the global parameter. More...
 
bool Use_continuation_timestepper
 Boolean to control original or new storage of dof stuff. More...
 
unsigned Dof_derivative_offset
 
unsigned Dof_current_offset
 
Vector< double > Dof_derivative
 Storage for the derivative of the problem variables wrt arc-length. More...
 
Vector< double > Dof_current
 Storage for the present values of the variables. More...
 
double Ds_current
 Storage for the current step value. More...
 
unsigned Desired_newton_iterations_ds
 
double Minimum_ds
 Minimum desired value of arc-length. More...
 
bool Bifurcation_detection
 Boolean to control bifurcation detection via determinant of Jacobian. More...
 
bool Bisect_to_find_bifurcation
 Boolean to control wheter bisection is used to located bifurcation. More...
 
bool First_jacobian_sign_change
 Boolean to indicate whether a sign change has occured in the Jacobian. More...
 
bool Arc_length_step_taken
 Boolean to indicate whether an arc-length step has been taken. More...
 
bool Use_finite_differences_for_continuation_derivatives
 
OomphCommunicator * Communicator_pt
 The communicator for this problem. More...
 
bool Always_take_one_newton_step
 
double Timestep_reduction_factor_after_nonconvergence
 
bool Keep_temporal_error_below_tolerance
 
- Static Protected Attributes inherited from oomph::Problem
static ContinuationStorageScheme Continuation_time_stepper
 Storage for the single static continuation timestorage object. More...
 

Detailed Description

template<class ELEMENT>
class ScatteringProblem< ELEMENT >

Problem class to compute scattering of planar wave from unit disk.

////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////////////

Constructor & Destructor Documentation

◆ ScatteringProblem() [1/3]

template<class ELEMENT , class MESH >
ScatteringProblem< ELEMENT, MESH >::ScatteringProblem

Constructor.

Constructor for Helmholtz problem.

309 {
310 
311  // Setup "bulk" mesh
312 
313  // # of elements in theta
314  unsigned n_theta=15;
315 
316  // # of elements in radius
317  unsigned n_r=5;
318 
319  // Inner radius
320  double a=1.0;
321 
322  // Thickness of annular computational domain
323  double h=0.5;
324 
325  // Set outer radius
327 
328  // Mesh is periodic
329  bool periodic=true;
330 
331  // Full circle
332  double azimuthal_fraction=1.0;
333 
334 #ifdef ADAPTIVE
335 
336  // Build "bulk" mesh
337  Bulk_mesh_pt=
339  azimuthal_fraction,n_theta,n_r,a,h);
340 
341  // Create/set error estimator
342  Bulk_mesh_pt->spatial_error_estimator_pt()=new Z2ErrorEstimator;
343 
344  // Choose error tolerances to force some uniform refinement
345  Bulk_mesh_pt->min_permitted_error()=0.004;
346  Bulk_mesh_pt->max_permitted_error()=0.01;
347 
348 #else
349 
350  // Build "bulk" mesh
351  Bulk_mesh_pt=
352  new TwoDAnnularMesh<ELEMENT>(periodic,
353  azimuthal_fraction,n_theta,n_r,a,h);
354 
355 #endif
356 
357  // Pointer to mesh containing the Helmholtz outer boundary condition
358  // elements. Specify outer radius and number of Fourier terms to be
359  // used in gamma integral
362 
363  // Pointer to mesh containing the Helmholtz inner boundary condition
364  // elements. Specify outer radius
366 
367  // Create prescribed-flux elements from all elements that are
368  // adjacent to the inner boundary , but add them to a separate mesh.
370 
371  // Create outer boundary elements from all elements that are
372  // adjacent to the outer boundary , but add them to a separate mesh.
374 
375  // Add the several sub meshes to the problem
379 
380  // Build the Problem's global mesh from its various sub-meshes
382 
383  // Complete the build of all elements so they are fully functional
384 
385  // Loop over the Helmholtz bulk elements to set up element-specific
386  // things that cannot be handled by constructor: Pass pointer to
387  // wave number squared
388  unsigned n_element = Bulk_mesh_pt->nelement();
389  for(unsigned e=0;e<n_element;e++)
390  {
391  // Upcast from GeneralisedElement to Helmholtz bulk element
392  ELEMENT *el_pt = dynamic_cast<ELEMENT*>(Bulk_mesh_pt->element_pt(e));
393 
394  //Set the k_squared pointer
395  el_pt->k_squared_pt() = &GlobalParameters::K_squared;
396  }
397 
398  // Set up elements on outer boundary
400 
401  // Set pointer to prescribed flux function for flux elements
403 
404  // Setup equation numbering scheme
405  cout <<"Number of equations: " << assign_eqn_numbers() << std::endl;
406 
407 } // end of constructor
Array< double, 1, 3 > e(1./3., 0.5, 2.)
void create_flux_elements(const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_inner_boundary_mesh_pt)
Definition: scattering.cc:611
Mesh * Helmholtz_inner_boundary_mesh_pt
Definition: scattering.cc:297
HelmholtzDtNMesh< ELEMENT > * Helmholtz_outer_boundary_mesh_pt
Definition: scattering.cc:293
TwoDAnnularMesh< ELEMENT > * Bulk_mesh_pt
Pointer to the "bulk" mesh.
Definition: scattering.cc:287
void create_outer_bc_elements(const unsigned &b, Mesh *const &bulk_mesh_pt, Mesh *const &helmholtz_outer_boundary_mesh_pt)
Definition: scattering.cc:645
void set_prescribed_incoming_flux_pt()
Definition: scattering.cc:493
void setup_outer_boundary()
Set up boundary condition elements on outer boundary.
Definition: scattering.cc:451
Definition: helmholtz_bc_elements.h:562
Definition: mesh.h:67
unsigned add_sub_mesh(Mesh *const &mesh_pt)
Definition: problem.h:1330
void build_global_mesh()
Definition: problem.cc:1493
unsigned long assign_eqn_numbers(const bool &assign_local_eqn_numbers=true)
Definition: problem.cc:1989
Definition: annular_mesh.template.h:108
Definition: annular_mesh.template.h:46
Definition: error_estimator.h:266
const Scalar * a
Definition: level2_cplx_impl.h:32
double Outer_radius
Radius of outer boundary (must be a circle!)
Definition: helmholtz_point_source.cc:71
double K_squared
Square of the wavenumber.
Definition: helmholtz_point_source.cc:60
unsigned N_fourier
Definition: scattering.cc:68

References a, e(), GlobalParameters::K_squared, GlobalParameters::N_fourier, and GlobalParameters::Outer_radius.

◆ ~ScatteringProblem() [1/3]

template<class ELEMENT >
ScatteringProblem< ELEMENT >::~ScatteringProblem ( )
inline

Destructor (empty)

231 {}

◆ ScatteringProblem() [2/3]

template<class ELEMENT >
ScatteringProblem< ELEMENT >::ScatteringProblem ( )

Constructor.

◆ ~ScatteringProblem() [2/3]

template<class ELEMENT >
ScatteringProblem< ELEMENT >::~ScatteringProblem ( )
inline

Destructor (empty)

230 {}

◆ ScatteringProblem() [3/3]

template<class ELEMENT >
ScatteringProblem< ELEMENT >::ScatteringProblem ( )

Constructor.

◆ ~ScatteringProblem() [3/3]

template<class ELEMENT >
ScatteringProblem< ELEMENT >::~ScatteringProblem ( )
inline

Destructor (empty)

231 {}

Member Function Documentation

◆ actions_after_adapt() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::actions_after_adapt
virtual

Actions after adapt: Rebuild the mesh of prescribed flux elements.

Actions after adapt: Rebuild the face element meshes.

Reimplemented from oomph::Problem.

430 {
431  // Create prescribed-flux elements and BC elements
432  // from all elements that are adjacent to the boundaries and add them to
433  // Helmholtz_boundary_meshes
436 
437  // Rebuild the Problem's global mesh from its various sub-meshes
439 
440  // Set pointer to prescribed flux function and DtN mesh
443 
444 }// end of actions_after_adapt
void rebuild_global_mesh()
Definition: problem.cc:1533

◆ actions_after_adapt() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_after_adapt ( )
virtual

Actions after adapt: Rebuild the mesh of prescribed flux elements.

Reimplemented from oomph::Problem.

◆ actions_after_adapt() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_after_adapt ( )
virtual

Actions after adapt: Rebuild the mesh of prescribed flux elements.

Reimplemented from oomph::Problem.

◆ actions_after_newton_solve() [1/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_after_newton_solve ( )
inlinevirtual

Update the problem specs after solve (empty)

Reimplemented from oomph::Problem.

241 {}

◆ actions_after_newton_solve() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_after_newton_solve ( )
inlinevirtual

Update the problem specs after solve (empty)

Reimplemented from oomph::Problem.

240 {}

◆ actions_after_newton_solve() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_after_newton_solve ( )
inlinevirtual

Update the problem specs after solve (empty)

Reimplemented from oomph::Problem.

241 {}

◆ actions_before_adapt() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::actions_before_adapt
virtual

Actions before adapt: Wipe the mesh of prescribed flux elements.

Actions before adapt: Wipe the mesh of face elements.

Reimplemented from oomph::Problem.

414 {
415  // Kill the flux elements and wipe the boundary meshs
418 
419  // Rebuild the Problem's global mesh from its various sub-meshes
421 
422 }// end of actions_before_adapt
void delete_face_elements(Mesh *const &boundary_mesh_pt)
Delete boundary face elements and wipe the surface mesh.
Definition: scattering.cc:688

◆ actions_before_adapt() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_adapt ( )
virtual

Actions before adapt: Wipe the mesh of prescribed flux elements.

Reimplemented from oomph::Problem.

◆ actions_before_adapt() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_adapt ( )
virtual

Actions before adapt: Wipe the mesh of prescribed flux elements.

Reimplemented from oomph::Problem.

◆ actions_before_newton_convergence_check() [1/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_newton_convergence_check ( )
inlinevirtual

Recompute gamma integral before checking Newton residuals.

Reimplemented from oomph::Problem.

245  {
247  {
248  Helmholtz_outer_boundary_mesh_pt->setup_gamma();
249  }
250  }
bool DtN_BC
Definition: helmholtz_point_source.cc:64

References GlobalParameters::DtN_BC.

◆ actions_before_newton_convergence_check() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_newton_convergence_check ( )
inlinevirtual

Recompute gamma integral before checking Newton residuals.

Reimplemented from oomph::Problem.

244  {
246  {
247  Helmholtz_outer_boundary_mesh_pt->setup_gamma();
248  }
249  }

References GlobalParameters::DtN_BC.

◆ actions_before_newton_convergence_check() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_newton_convergence_check ( )
inlinevirtual

Recompute gamma integral before checking Newton residuals.

Reimplemented from oomph::Problem.

245  {
247  {
248  Helmholtz_outer_boundary_mesh_pt->setup_gamma();
249  }
250  }

References GlobalParameters::DtN_BC.

◆ actions_before_newton_solve() [1/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_newton_solve ( )
inlinevirtual

Update the problem specs before solve (empty)

Reimplemented from oomph::Problem.

238 {}

◆ actions_before_newton_solve() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_newton_solve ( )
inlinevirtual

Update the problem specs before solve (empty)

Reimplemented from oomph::Problem.

237 {}

◆ actions_before_newton_solve() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::actions_before_newton_solve ( )
inlinevirtual

Update the problem specs before solve (empty)

Reimplemented from oomph::Problem.

238 {}

◆ create_flux_elements() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::create_flux_elements ( const unsigned &  b,
Mesh *const &  bulk_mesh_pt,
Mesh *const &  helmholtz_inner_boundary_mesh_pt 
)

Create Helmholtz flux elements on boundary b of the Mesh pointed to by bulk_mesh_pt and add them to the specified surface Mesh

Create Helmholtz inner Flux Elements on the b-th boundary of the Mesh object pointed to by bulk_mesh_pt and add the elements to the Mesh object pointed to by helmholtz_inner_boundary_mesh_pt

613 {
614  // Loop over the bulk elements adjacent to boundary b
615  unsigned n_element = bulk_mesh_pt->nboundary_element(b);
616  for(unsigned e=0;e<n_element;e++)
617  {
618  // Get pointer to the bulk element that is adjacent to boundary b
619  ELEMENT* bulk_elem_pt = dynamic_cast<ELEMENT*>(
620  bulk_mesh_pt->boundary_element_pt(b,e));
621 
622  //Find the index of the face of element e along boundary b
623  int face_index = bulk_mesh_pt->face_index_at_boundary(b,e);
624 
625  // Build the corresponding prescribed incoming-flux element
626  HelmholtzFluxElement<ELEMENT>* flux_element_pt = new
627  HelmholtzFluxElement<ELEMENT>(bulk_elem_pt,face_index);
628 
629  //Add the prescribed incoming-flux element to the surface mesh
630  helmholtz_inner_boundary_mesh_pt->add_element_pt(flux_element_pt);
631 
632  } //end of loop over bulk elements adjacent to boundary b
633 
634 } // end of create_flux_elements
Scalar * b
Definition: benchVecAdd.cpp:17
Definition: helmholtz_flux_elements.h:53
int face_index_at_boundary(const unsigned &b, const unsigned &e) const
Definition: mesh.h:896
unsigned nboundary_element(const unsigned &b) const
Return number of finite elements that are adjacent to boundary b.
Definition: mesh.h:878
FiniteElement * boundary_element_pt(const unsigned &b, const unsigned &e) const
Return pointer to e-th finite element on boundary b.
Definition: mesh.h:840
void add_element_pt(GeneralisedElement *const &element_pt)
Add a (pointer to) an element to the mesh.
Definition: mesh.h:617

References oomph::Mesh::add_element_pt(), b, oomph::Mesh::boundary_element_pt(), e(), oomph::Mesh::face_index_at_boundary(), and oomph::Mesh::nboundary_element().

◆ create_flux_elements() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::create_flux_elements ( const unsigned &  b,
Mesh *const &  bulk_mesh_pt,
Mesh *const &  helmholtz_inner_boundary_mesh_pt 
)

Create Helmholtz flux elements on boundary b of the Mesh pointed to by bulk_mesh_pt and add them to the specified surface Mesh

◆ create_flux_elements() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::create_flux_elements ( const unsigned &  b,
Mesh *const &  bulk_mesh_pt,
Mesh *const &  helmholtz_inner_boundary_mesh_pt 
)

Create Helmholtz flux elements on boundary b of the Mesh pointed to by bulk_mesh_pt and add them to the specified surface Mesh

◆ create_outer_bc_elements() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::create_outer_bc_elements ( const unsigned &  b,
Mesh *const &  bulk_mesh_pt,
Mesh *const &  helmholtz_outer_boundary_mesh_pt 
)

Create BC elements on boundary b of the Mesh pointed to by bulk_mesh_pt and add them to the specified survace Mesh

Create outer BC elements on the b-th boundary of the Mesh object pointed to by bulk_mesh_pt and add the elements to the Mesh object pointed to by helmholtz_outer_boundary_mesh_pt.

647 {
648  // Loop over the bulk elements adjacent to boundary b?
649  unsigned n_element = bulk_mesh_pt->nboundary_element(b);
650  for(unsigned e=0;e<n_element;e++)
651  {
652  // Get pointer to the bulk element that is adjacent to boundary b
653  ELEMENT* bulk_elem_pt = dynamic_cast<ELEMENT*>(
654  bulk_mesh_pt->boundary_element_pt(b,e));
655 
656  //Find the index of the face of element e along boundary b
657  int face_index = bulk_mesh_pt->face_index_at_boundary(b,e);
658 
659  // Build the corresponding outer flux element
660 
661  // Dirichlet to Neumann boundary conditon
663  {
664  HelmholtzDtNBoundaryElement<ELEMENT>* flux_element_pt = new
665  HelmholtzDtNBoundaryElement<ELEMENT>(bulk_elem_pt,face_index);
666 
667  //Add the flux boundary element to the helmholtz_outer_boundary_mesh
668  helmholtz_outer_boundary_mesh_pt->add_element_pt(flux_element_pt);
669  }
670  // ABCs BC
671  else
672  {
673  HelmholtzAbsorbingBCElement<ELEMENT>* flux_element_pt = new
674  HelmholtzAbsorbingBCElement<ELEMENT>(bulk_elem_pt,face_index);
675 
676  //Add the flux boundary element to the helmholtz_outer_boundary_mesh
677  helmholtz_outer_boundary_mesh_pt->add_element_pt(flux_element_pt);
678  }
679  } //end of loop over bulk elements adjacent to boundary b
680 } // end of create_outer_bc_elements
Definition: helmholtz_bc_elements.h:639
Definition: helmholtz_bc_elements.h:1121

References oomph::Mesh::add_element_pt(), b, oomph::Mesh::boundary_element_pt(), GlobalParameters::DtN_BC, e(), oomph::Mesh::face_index_at_boundary(), and oomph::Mesh::nboundary_element().

◆ create_outer_bc_elements() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::create_outer_bc_elements ( const unsigned &  b,
Mesh *const &  bulk_mesh_pt,
Mesh *const &  helmholtz_outer_boundary_mesh_pt 
)

Create BC elements on boundary b of the Mesh pointed to by bulk_mesh_pt and add them to the specified survace Mesh

◆ create_outer_bc_elements() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::create_outer_bc_elements ( const unsigned &  b,
Mesh *const &  bulk_mesh_pt,
Mesh *const &  helmholtz_outer_boundary_mesh_pt 
)

Create BC elements on boundary b of the Mesh pointed to by bulk_mesh_pt and add them to the specified survace Mesh

◆ delete_face_elements() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::delete_face_elements ( Mesh *const &  boundary_mesh_pt)

Delete boundary face elements and wipe the surface mesh.

Delete face elements and wipe the boundary mesh.

689 {
690  // Loop over the surface elements
691  unsigned n_element = boundary_mesh_pt->nelement();
692  for(unsigned e=0;e<n_element;e++)
693  {
694  // Kill surface element
695  delete boundary_mesh_pt->element_pt(e);
696  }
697 
698  // Wipe the mesh
699  boundary_mesh_pt->flush_element_and_node_storage();
700 
701 } // end of delete_outer_face_elements
void flush_element_and_node_storage()
Definition: mesh.h:407
GeneralisedElement *& element_pt(const unsigned long &e)
Return pointer to element e.
Definition: mesh.h:448
unsigned long nelement() const
Return number of elements in the mesh.
Definition: mesh.h:590

References e(), oomph::Mesh::element_pt(), oomph::Mesh::flush_element_and_node_storage(), and oomph::Mesh::nelement().

◆ delete_face_elements() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::delete_face_elements ( Mesh *const &  boundary_mesh_pt)

Delete boundary face elements and wipe the surface mesh.

◆ delete_face_elements() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::delete_face_elements ( Mesh *const &  boundary_mesh_pt)

Delete boundary face elements and wipe the surface mesh.

◆ doc_solution() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::doc_solution ( DocInfo &  doc_info)

Doc the solution: doc_info contains labels/output directory etc.

Doc the solution. DocInfo object stores flags/labels for where the output gets written to

518 {
519 
520  ofstream some_file,some_file2;
521  char filename[100];
522 
523  // Number of plot points
524  unsigned npts;
525  npts=5;
526 
527  // Compute/output the radiated power
528  //----------------------------------
529  sprintf(filename,"%s/power%i.dat",doc_info.directory().c_str(),
530  doc_info.number());
531  some_file.open(filename);
532 
533  // Accumulate contribution from elements
534  double power=0.0;
535  unsigned nn_element=Helmholtz_outer_boundary_mesh_pt->nelement();
536  for(unsigned e=0;e<nn_element;e++)
537  {
539  dynamic_cast< HelmholtzBCElementBase<ELEMENT>*>(
540  Helmholtz_outer_boundary_mesh_pt->element_pt(e));
541  power += el_pt->global_power_contribution(some_file);
542  }
543  some_file.close();
544  oomph_info << "Total radiated power: " << power << std::endl;
545 
546  // Output solution
547  //-----------------
548  sprintf(filename,"%s/soln%i.dat",doc_info.directory().c_str(),
549  doc_info.number());
550  some_file.open(filename);
551  Bulk_mesh_pt->output(some_file,npts);
552  some_file.close();
553 
554  // Output exact solution
555  //----------------------
556  sprintf(filename,"%s/exact_soln%i.dat",doc_info.directory().c_str(),
557  doc_info.number());
558  some_file.open(filename);
559  Bulk_mesh_pt->output_fct(some_file,npts,GlobalParameters::get_exact_u);
560  some_file.close();
561 
562  double error,norm;
563  sprintf(filename,"%s/error%i.dat",doc_info.directory().c_str(),
564  doc_info.number());
565  some_file.open(filename);
566  Bulk_mesh_pt->compute_error(some_file,GlobalParameters::get_exact_u,
567  error,norm);
568  some_file.close();
569 
570  // Doc L2 error and norm of solution
571  oomph_info << "\nNorm of error : " << sqrt(error) << std::endl;
572  oomph_info << "Norm of solution: " << sqrt(norm) << std::endl << std::endl;
573 
574 
575  // Do animation of Helmholtz solution
576  //-----------------------------------
577  unsigned nstep=40;
578  for (unsigned i=0;i<nstep;i++)
579  {
580  sprintf(filename,"%s/helmholtz_animation%i_frame%i.dat",
581  doc_info.directory().c_str(),
582  doc_info.number(),i);
583  some_file.open(filename);
584  sprintf(filename,"%s/exact_helmholtz_animation%i_frame%i.dat",
585  doc_info.directory().c_str(),
586  doc_info.number(),i);
587  some_file2.open(filename);
588  double phi=2.0*MathematicalConstants::Pi*double(i)/double(nstep-1);
589  unsigned nelem=Bulk_mesh_pt->nelement();
590  for (unsigned e=0;e<nelem;e++)
591  {
592  ELEMENT* el_pt=dynamic_cast<ELEMENT*>(
593  Bulk_mesh_pt->element_pt(e));
594  el_pt->output_real(some_file,phi,npts);
595  el_pt->output_real_fct(some_file2,phi,npts,
597  }
598  some_file.close();
599  some_file2.close();
600  }
601 
602 } // end of doc
AnnoyingScalar sqrt(const AnnoyingScalar &x)
Definition: AnnoyingScalar.h:134
int i
Definition: BiCGSTAB_step_by_step.cpp:9
std::string directory() const
Output directory.
Definition: oomph_utilities.h:524
unsigned & number()
Number used (e.g.) for labeling output files.
Definition: oomph_utilities.h:554
Definition: helmholtz_bc_elements.h:168
double global_power_contribution()
Definition: helmholtz_bc_elements.h:248
double Pi
Definition: two_d_biharmonic.cc:235
void get_exact_u(const double &time, const Vector< double > &x, Vector< double > &u)
Exact solution as a Vector.
Definition: stefan_boltzmann.cc:169
string filename
Definition: MergeRestartFiles.py:39
int error
Definition: calibrate.py:297
OomphInfo oomph_info
Definition: oomph_definitions.cc:319

References oomph::DocInfo::directory(), e(), calibrate::error, MergeRestartFiles::filename, GlobalParameters::get_exact_u(), oomph::HelmholtzBCElementBase< ELEMENT >::global_power_contribution(), i, oomph::DocInfo::number(), oomph::oomph_info, oomph::MathematicalConstants::Pi, and sqrt().

◆ doc_solution() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::doc_solution ( DocInfo &  doc_info)

Doc the solution. DocInfo object stores flags/labels for where the output gets written to

◆ doc_solution() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::doc_solution ( DocInfo &  doc_info)

Doc the solution. DocInfo object stores flags/labels for where the output gets written to

◆ set_prescribed_incoming_flux_pt() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::set_prescribed_incoming_flux_pt

Set pointer to prescribed-flux function for all elements in the surface mesh on the surface of the unit disk

Set pointer to prescribed incoming-flux function for all elements in the inner boundary

494 {
495  // Loop over the flux elements to pass pointer to prescribed
496  // flux function for the inner boundary
497  unsigned n_element=Helmholtz_inner_boundary_mesh_pt->nelement();
498  for(unsigned e=0;e<n_element;e++)
499  {
500  // Upcast from GeneralisedElement to Helmholtz flux element
502  dynamic_cast< HelmholtzFluxElement<ELEMENT>*>(
504 
505  // Set the pointer to the prescribed flux function
506  el_pt->flux_fct_pt() =
508  }
509 
510 }// end of set prescribed_incoming_flux pt
HelmholtzPrescribedFluxFctPt & flux_fct_pt()
Broken assignment operator.
Definition: helmholtz_flux_elements.h:88
void prescribed_incoming_flux(const Vector< double > &x, complex< double > &flux)
Definition: scattering.cc:156

References e(), oomph::HelmholtzFluxElement< ELEMENT >::flux_fct_pt(), and GlobalParameters::prescribed_incoming_flux().

◆ set_prescribed_incoming_flux_pt() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::set_prescribed_incoming_flux_pt ( )

Set pointer to prescribed-flux function for all elements in the surface mesh on the surface of the unit disk

◆ set_prescribed_incoming_flux_pt() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::set_prescribed_incoming_flux_pt ( )

Set pointer to prescribed-flux function for all elements in the surface mesh on the surface of the unit disk

◆ setup_outer_boundary() [1/3]

template<class ELEMENT , class MESH >
void ScatteringProblem< ELEMENT, MESH >::setup_outer_boundary

Set up boundary condition elements on outer boundary.

Set pointers for elements on outer boundary.

452 {
453  // Loop over the flux elements to pass pointer to DtN
454  // BC for the outer boundary
455  unsigned n_element=Helmholtz_outer_boundary_mesh_pt->nelement();
456  for(unsigned e=0;e<n_element;e++)
457  {
458  // Dirichlet to Neumann BC
460  {
461  // Upcast from GeneralisedElement to Helmholtz flux element
463  dynamic_cast< HelmholtzDtNBoundaryElement<ELEMENT>*>(
464  Helmholtz_outer_boundary_mesh_pt->element_pt(e));
465 
466  // Set pointer to the mesh that contains all the boundary condition
467  // elements on this boundary
469  }
470  // ABCs BC
471  else
472  {
473  // Upcast from GeneralisedElement to appropriate type
475  dynamic_cast< HelmholtzAbsorbingBCElement<ELEMENT>*>(
476  Helmholtz_outer_boundary_mesh_pt->element_pt(e));
477 
478  // Set pointer to outer radius of artificial boundary
480 
481  // Set order of absorbing boundary condition
483  }
484  }
485 }
double *& outer_radius_pt()
Get pointer to radius of outer boundary (must be a cirle)
Definition: helmholtz_bc_elements.h:682
unsigned *& abc_order_pt()
Pointer to order of absorbing boundary condition.
Definition: helmholtz_bc_elements.h:655
void set_outer_boundary_mesh_pt(HelmholtzDtNMesh< ELEMENT > *mesh_pt)
Set mesh of all DtN boundary condition elements.
Definition: helmholtz_bc_elements.h:1169
unsigned ABC_order
Flag to choose wich order to use.
Definition: helmholtz_point_source.cc:68

References GlobalParameters::ABC_order, oomph::HelmholtzAbsorbingBCElement< ELEMENT >::abc_order_pt(), GlobalParameters::DtN_BC, e(), GlobalParameters::Outer_radius, oomph::HelmholtzAbsorbingBCElement< ELEMENT >::outer_radius_pt(), and oomph::HelmholtzDtNBoundaryElement< ELEMENT >::set_outer_boundary_mesh_pt().

◆ setup_outer_boundary() [2/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::setup_outer_boundary ( )

Set up boundary condition elements on outer boundary.

◆ setup_outer_boundary() [3/3]

template<class ELEMENT >
void ScatteringProblem< ELEMENT >::setup_outer_boundary ( )

Set up boundary condition elements on outer boundary.

Member Data Documentation

◆ Bulk_mesh_pt [1/3]

template<class ELEMENT >
TwoDAnnularMesh<ELEMENT>* ScatteringProblem< ELEMENT >::Bulk_mesh_pt

Pointer to the "bulk" mesh.

◆ Bulk_mesh_pt [2/3]

template<class ELEMENT >
TriangleMesh<ELEMENT>* ScatteringProblem< ELEMENT >::Bulk_mesh_pt

Pointer to the "bulk" mesh.

◆ Bulk_mesh_pt [3/3]

template<class ELEMENT >
MESH* ScatteringProblem< ELEMENT >::Bulk_mesh_pt

Pointer to the "bulk" mesh.

◆ Helmholtz_inner_boundary_mesh_pt

template<class ELEMENT >
Mesh * ScatteringProblem< ELEMENT >::Helmholtz_inner_boundary_mesh_pt

Pointer to the mesh containing the Helmholtz inner boundary condition elements

◆ Helmholtz_outer_boundary_mesh_pt

template<class ELEMENT >
HelmholtzDtNMesh< ELEMENT > * ScatteringProblem< ELEMENT >::Helmholtz_outer_boundary_mesh_pt

Pointer to mesh containing the DtN (or ABC) boundary condition elements

◆ Trace_file

template<class ELEMENT >
ofstream ScatteringProblem< ELEMENT >::Trace_file

Trace file.


The documentation for this class was generated from the following files: