RefineableQCrouzeixRaviartElementWithExternalElement< DIM > Class Template Reference

#include <my_boussinesq_elements.h>

+ Inheritance diagram for RefineableQCrouzeixRaviartElementWithExternalElement< DIM >:

Public Member Functions

 RefineableQCrouzeixRaviartElementWithExternalElement ()
 
unsigned required_nvalue (const unsigned &n) const
 
const doublera () const
 Access function for the Rayleigh number (const version) More...
 
double *& ra_pt ()
 Access function for the pointer to the Rayleigh number. More...
 
void output (ostream &outfile)
 Overload the standard output function with the broken default. More...
 
void output (ostream &outfile, const unsigned &nplot)
 
void output (FILE *file_pt)
 C-style output function: Broken default. More...
 
void output (FILE *file_pt, const unsigned &n_plot)
 C-style output function: Broken default. More...
 
void output_fct (ostream &outfile, const unsigned &Nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 Output function for an exact solution: Broken default. More...
 
void output_fct (ostream &outfile, const unsigned &Nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 
void further_build ()
 
void compute_error (ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void get_body_force_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &result)
 
void get_dbody_force_nst_dexternal_element_data (const unsigned &ipt, DenseMatrix< double > &result, Vector< unsigned > &global_eqn_number)
 external unknowns More...
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Fill in the constituent elements' contribution to the residual vector. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
void fill_in_off_diagonal_block_analytic (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned > > &dof_lookup_list) const
 
unsigned ndof_types () const
 
- Public Member Functions inherited from oomph::RefineableQCrouzeixRaviartElement< DIM >
 RefineableQCrouzeixRaviartElement ()
 Constructor. More...
 
 RefineableQCrouzeixRaviartElement (const RefineableQCrouzeixRaviartElement< DIM > &dummy)=delete
 Broken copy constructor. More...
 
unsigned ncont_interpolated_values () const
 Broken assignment operator. More...
 
void rebuild_from_sons (Mesh *&mesh_pt)
 
unsigned nrecovery_order ()
 
unsigned nvertex_node () const
 Number of vertex nodes in the element. More...
 
Nodevertex_node_pt (const unsigned &j) const
 Pointer to the j-th vertex node in the element. More...
 
void get_interpolated_values (const Vector< double > &s, Vector< double > &values)
 
void get_interpolated_values (const unsigned &t, const Vector< double > &s, Vector< double > &values)
 
void further_setup_hanging_nodes ()
 
void further_build ()
 
void build_fp_press_adv_diff_robin_bc_element (const unsigned &face_index)
 
void identify_load_data (std::set< std::pair< Data *, unsigned >> &paired_load_data)
 
void rebuild_from_sons (Mesh *&mesh_pt)
 2D Rebuild from sons: Reconstruct pressure from the (merged) sons More...
 
void rebuild_from_sons (Mesh *&mesh_pt)
 3D Rebuild from sons: Reconstruct pressure from the (merged) sons More...
 
void further_build ()
 
void further_build ()
 
- Public Member Functions inherited from oomph::QCrouzeixRaviartElement< DIM >
 QCrouzeixRaviartElement ()
 Constructor, there are DIM+1 internal values (for the pressure) More...
 
void pshape_nst (const Vector< double > &s, Shape &psi) const
 Pressure shape functions at local coordinate s. More...
 
void pshape_nst (const Vector< double > &s, Shape &psi, Shape &test) const
 Pressure shape and test functions at local coordinte s. More...
 
double p_nst (const unsigned &i) const
 
double p_nst (const unsigned &t, const unsigned &i) const
 
unsigned npres_nst () const
 Return number of pressure values. More...
 
double dpshape_and_dptest_eulerian_nst (const Vector< double > &s, Shape &ppsi, DShape &dppsidx, Shape &ptest, DShape &dptestdx) const
 
int p_local_eqn (const unsigned &n) const
 Return the local equation numbers for the pressure values. More...
 
void fix_pressure (const unsigned &p_dof, const double &p_value)
 Pin p_dof-th pressure dof and set it to value specified by p_value. More...
 
void identify_pressure_data (std::set< std::pair< Data *, unsigned >> &paired_pressure_data)
 
void output (std::ostream &outfile)
 Redirect output to NavierStokesEquations output. More...
 
void output (std::ostream &outfile, const unsigned &nplot)
 Redirect output to NavierStokesEquations output. More...
 
void output (FILE *file_pt)
 Redirect output to NavierStokesEquations output. More...
 
void output (FILE *file_pt, const unsigned &nplot)
 Redirect output to NavierStokesEquations output. More...
 
void full_output (std::ostream &outfile)
 
void full_output (std::ostream &outfile, const unsigned &nplot)
 
unsigned ndof_types () const
 
void get_dof_numbers_for_unknowns (std::list< std::pair< unsigned long, unsigned >> &dof_lookup_list) const
 
void pshape_nst (const Vector< double > &s, Shape &psi) const
 
double dpshape_and_dptest_eulerian_nst (const Vector< double > &s, Shape &ppsi, DShape &dppsidx, Shape &ptest, DShape &dptestdx) const
 
void pshape_nst (const Vector< double > &s, Shape &psi) const
 
double dpshape_and_dptest_eulerian_nst (const Vector< double > &s, Shape &ppsi, DShape &dppsidx, Shape &ptest, DShape &dptestdx) const
 
- Public Member Functions inherited from oomph::NavierStokesEquations< DIM >
 NavierStokesEquations ()
 
const doublere () const
 Reynolds number. More...
 
const doublere_st () const
 Product of Reynolds and Strouhal number (=Womersley number) More...
 
double *& re_pt ()
 Pointer to Reynolds number. More...
 
double *& re_st_pt ()
 Pointer to product of Reynolds and Strouhal number (=Womersley number) More...
 
const doubleviscosity_ratio () const
 
double *& viscosity_ratio_pt ()
 Pointer to Viscosity Ratio. More...
 
const doubledensity_ratio () const
 
double *& density_ratio_pt ()
 Pointer to Density ratio. More...
 
const doublere_invfr () const
 Global inverse Froude number. More...
 
double *& re_invfr_pt ()
 Pointer to global inverse Froude number. More...
 
const Vector< double > & g () const
 Vector of gravitational components. More...
 
Vector< double > *& g_pt ()
 Pointer to Vector of gravitational components. More...
 
NavierStokesBodyForceFctPtbody_force_fct_pt ()
 Access function for the body-force pointer. More...
 
NavierStokesBodyForceFctPt body_force_fct_pt () const
 Access function for the body-force pointer. Const version. More...
 
NavierStokesSourceFctPtsource_fct_pt ()
 Access function for the source-function pointer. More...
 
NavierStokesSourceFctPt source_fct_pt () const
 Access function for the source-function pointer. Const version. More...
 
NavierStokesPressureAdvDiffSourceFctPtsource_fct_for_pressure_adv_diff ()
 
NavierStokesPressureAdvDiffSourceFctPt source_fct_for_pressure_adv_diff () const
 
intpinned_fp_pressure_eqn ()
 
double u_nst (const unsigned &n, const unsigned &i) const
 
double u_nst (const unsigned &t, const unsigned &n, const unsigned &i) const
 
virtual unsigned u_index_nst (const unsigned &i) const
 
unsigned n_u_nst () const
 
double du_dt_nst (const unsigned &n, const unsigned &i) const
 
void disable_ALE ()
 
void enable_ALE ()
 
virtual int p_nodal_index_nst () const
 
double pressure_integral () const
 Integral of pressure over element. More...
 
double dissipation () const
 Return integral of dissipation over element. More...
 
double dissipation (const Vector< double > &s) const
 Return dissipation at local coordinate s. More...
 
void get_vorticity (const Vector< double > &s, Vector< double > &vorticity) const
 Compute the vorticity vector at local coordinate s. More...
 
void get_vorticity (const Vector< double > &s, double &vorticity) const
 Compute the scalar vorticity at local coordinate s (2D) More...
 
double kin_energy () const
 Get integral of kinetic energy over element. More...
 
double d_kin_energy_dt () const
 Get integral of time derivative of kinetic energy over element. More...
 
void strain_rate (const Vector< double > &s, DenseMatrix< double > &strain_rate) const
 Strain-rate tensor: 1/2 (du_i/dx_j + du_j/dx_i) More...
 
void get_traction (const Vector< double > &s, const Vector< double > &N, Vector< double > &traction)
 
void get_traction (const Vector< double > &s, const Vector< double > &N, Vector< double > &traction_p, Vector< double > &traction_visc_n, Vector< double > &traction_visc_t)
 
void get_load (const Vector< double > &s, const Vector< double > &N, Vector< double > &load)
 
unsigned nscalar_paraview () const
 
void scalar_value_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot) const
 
void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt) const
 
std::string scalar_name_paraview (const unsigned &i) const
 
void full_output (std::ostream &outfile)
 
void full_output (std::ostream &outfile, const unsigned &nplot)
 
void output_veloc (std::ostream &outfile, const unsigned &nplot, const unsigned &t)
 
void output_vorticity (std::ostream &outfile, const unsigned &nplot)
 
void output_fct (std::ostream &outfile, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
 
void output_fct (std::ostream &outfile, const unsigned &nplot, const double &time, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt)
 
void compute_norm (double &norm)
 Compute norm of solution: square of the L2 norm of the velocities. More...
 
void compute_norm (Vector< double > &norm)
 Compute the vector norm of the FEM solution. More...
 
void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, double &error, double &norm)
 
void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
 
void fill_in_contribution_to_residuals (Vector< double > &residuals)
 Compute the element's residual Vector. More...
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
void fill_in_contribution_to_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 Compute the element's residual Vector. More...
 
void fill_in_contribution_to_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
void fill_in_contribution_to_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
void fill_in_pressure_advection_diffusion_residuals (Vector< double > &residuals)
 
void fill_in_pressure_advection_diffusion_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void pin_all_non_pressure_dofs (std::map< Data *, std::vector< int >> &eqn_number_backup)
 Pin all non-pressure dofs and backup eqn numbers. More...
 
void output_pressure_advection_diffusion_robin_elements (std::ostream &outfile)
 
void delete_pressure_advection_diffusion_robin_elements ()
 
void interpolated_u_nst (const Vector< double > &s, Vector< double > &veloc) const
 Compute vector of FE interpolated velocity u at local coordinate s. More...
 
double interpolated_u_nst (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated velocity u[i] at local coordinate s. More...
 
double interpolated_u_nst (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual double interpolated_p_nst (const Vector< double > &s) const
 Return FE interpolated pressure at local coordinate s. More...
 
double interpolated_p_nst (const unsigned &t, const Vector< double > &s) const
 Return FE interpolated pressure at local coordinate s at time level t. More...
 
double interpolated_dudx_nst (const Vector< double > &s, const unsigned &i, const unsigned &j) const
 
void point_output_data (const Vector< double > &s, Vector< double > &data)
 
void get_vorticity (const Vector< double > &s, Vector< double > &vorticity) const
 
void get_vorticity (const Vector< double > &s, double &vorticity) const
 
void get_vorticity (const Vector< double > &s, Vector< double > &vorticity) const
 Compute 3D vorticity vector at local coordinate s. More...
 
- Public Member Functions inherited from oomph::FSIFluidElement
 FSIFluidElement ()
 Constructor. More...
 
 FSIFluidElement (const FSIFluidElement &)=delete
 Broken copy constructor. More...
 
void operator= (const FSIFluidElement &)=delete
 Broken assignment operator. More...
 
- Public Member Functions inherited from oomph::FiniteElement
void set_dimension (const unsigned &dim)
 
void set_nodal_dimension (const unsigned &nodal_dim)
 
void set_nnodal_position_type (const unsigned &nposition_type)
 Set the number of types required to interpolate the coordinate. More...
 
void set_n_node (const unsigned &n)
 
int nodal_local_eqn (const unsigned &n, const unsigned &i) const
 
double dJ_eulerian_at_knot (const unsigned &ipt, Shape &psi, DenseMatrix< double > &djacobian_dX) const
 
 FiniteElement ()
 Constructor. More...
 
virtual ~FiniteElement ()
 
 FiniteElement (const FiniteElement &)=delete
 Broken copy constructor. More...
 
virtual bool local_coord_is_valid (const Vector< double > &s)
 Broken assignment operator. More...
 
virtual void move_local_coord_back_into_element (Vector< double > &s) const
 
void get_centre_of_gravity_and_max_radius_in_terms_of_zeta (Vector< double > &cog, double &max_radius) const
 
virtual void local_coordinate_of_node (const unsigned &j, Vector< double > &s) const
 
virtual void local_fraction_of_node (const unsigned &j, Vector< double > &s_fraction)
 
virtual double local_one_d_fraction_of_node (const unsigned &n1d, const unsigned &i)
 
virtual void set_macro_elem_pt (MacroElement *macro_elem_pt)
 
MacroElementmacro_elem_pt ()
 Access function to pointer to macro element. More...
 
void get_x (const Vector< double > &s, Vector< double > &x) const
 
void get_x (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void get_x_from_macro_element (const Vector< double > &s, Vector< double > &x) const
 
virtual void get_x_from_macro_element (const unsigned &t, const Vector< double > &s, Vector< double > &x)
 
virtual void set_integration_scheme (Integral *const &integral_pt)
 Set the spatial integration scheme. More...
 
Integral *const & integral_pt () const
 Return the pointer to the integration scheme (const version) More...
 
virtual void shape (const Vector< double > &s, Shape &psi) const =0
 
virtual void shape_at_knot (const unsigned &ipt, Shape &psi) const
 
virtual void dshape_local (const Vector< double > &s, Shape &psi, DShape &dpsids) const
 
virtual void dshape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids) const
 
virtual void d2shape_local (const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual void d2shape_local_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsids, DShape &d2psids) const
 
virtual double J_eulerian (const Vector< double > &s) const
 
virtual double J_eulerian_at_knot (const unsigned &ipt) const
 
void check_J_eulerian_at_knots (bool &passed) const
 
void check_jacobian (const double &jacobian) const
 
double dshape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx) const
 
virtual double dshape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsi, DenseMatrix< double > &djacobian_dX, RankFourTensor< double > &d_dpsidx_dX) const
 
double d2shape_eulerian (const Vector< double > &s, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual double d2shape_eulerian_at_knot (const unsigned &ipt, Shape &psi, DShape &dpsidx, DShape &d2psidx) const
 
virtual void describe_nodal_local_dofs (std::ostream &out, const std::string &current_string) const
 
virtual void assign_all_generic_local_eqn_numbers (const bool &store_local_dof_pt)
 
Node *& node_pt (const unsigned &n)
 Return a pointer to the local node n. More...
 
Node *const & node_pt (const unsigned &n) const
 Return a pointer to the local node n (const version) More...
 
unsigned nnode () const
 Return the number of nodes. More...
 
virtual unsigned nnode_1d () const
 
double raw_nodal_position (const unsigned &n, const unsigned &i) const
 
double raw_nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &i) const
 
double raw_dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double raw_dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position (const unsigned &n, const unsigned &i) const
 
double nodal_position (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double dnodal_position_dt (const unsigned &n, const unsigned &i) const
 Return the i-th component of nodal velocity: dx/dt at local node n. More...
 
double dnodal_position_dt (const unsigned &n, const unsigned &j, const unsigned &i) const
 
double nodal_position_gen (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double nodal_position_gen (const unsigned &t, const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &n, const unsigned &k, const unsigned &i) const
 
double dnodal_position_gen_dt (const unsigned &j, const unsigned &n, const unsigned &k, const unsigned &i) const
 
unsigned nnodal_position_type () const
 
bool has_hanging_nodes () const
 
unsigned nodal_dimension () const
 Return the required Eulerian dimension of the nodes in this element. More...
 
virtual Nodeconstruct_node (const unsigned &n)
 
virtual Nodeconstruct_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
virtual Nodeconstruct_boundary_node (const unsigned &n)
 
virtual Nodeconstruct_boundary_node (const unsigned &n, TimeStepper *const &time_stepper_pt)
 
int get_node_number (Node *const &node_pt) const
 
virtual Nodeget_node_at_local_coordinate (const Vector< double > &s) const
 
double raw_nodal_value (const unsigned &n, const unsigned &i) const
 
double raw_nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &n, const unsigned &i) const
 
double nodal_value (const unsigned &t, const unsigned &n, const unsigned &i) const
 
unsigned dim () const
 
virtual ElementGeometry::ElementGeometry element_geometry () const
 Return the geometry type of the element (either Q or T usually). More...
 
virtual double interpolated_x (const Vector< double > &s, const unsigned &i) const
 Return FE interpolated coordinate x[i] at local coordinate s. More...
 
virtual double interpolated_x (const unsigned &t, const Vector< double > &s, const unsigned &i) const
 
virtual void interpolated_x (const Vector< double > &s, Vector< double > &x) const
 Return FE interpolated position x[] at local coordinate s as Vector. More...
 
virtual void interpolated_x (const unsigned &t, const Vector< double > &s, Vector< double > &x) const
 
virtual double interpolated_dxdt (const Vector< double > &s, const unsigned &i, const unsigned &t)
 
virtual void interpolated_dxdt (const Vector< double > &s, const unsigned &t, Vector< double > &dxdt)
 
unsigned ngeom_data () const
 
Datageom_data_pt (const unsigned &j)
 
void position (const Vector< double > &zeta, Vector< double > &r) const
 
void position (const unsigned &t, const Vector< double > &zeta, Vector< double > &r) const
 
void dposition_dt (const Vector< double > &zeta, const unsigned &t, Vector< double > &drdt)
 
virtual double zeta_nodal (const unsigned &n, const unsigned &k, const unsigned &i) const
 
void interpolated_zeta (const Vector< double > &s, Vector< double > &zeta) const
 
void locate_zeta (const Vector< double > &zeta, GeomObject *&geom_object_pt, Vector< double > &s, const bool &use_coordinate_as_initial_guess=false)
 
virtual void node_update ()
 
virtual void identify_geometric_data (std::set< Data * > &geometric_data_pt)
 
virtual double s_min () const
 Min value of local coordinate. More...
 
virtual double s_max () const
 Max. value of local coordinate. More...
 
double size () const
 
virtual double compute_physical_size () const
 
void point_output (std::ostream &outfile, const Vector< double > &s)
 
virtual unsigned nplot_points_paraview (const unsigned &nplot) const
 
virtual unsigned nsub_elements_paraview (const unsigned &nplot) const
 
void output_paraview (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_output_offset_information (std::ofstream &file_out, const unsigned &nplot, unsigned &counter) const
 
virtual void write_paraview_type (std::ofstream &file_out, const unsigned &nplot) const
 
virtual void write_paraview_offsets (std::ofstream &file_out, const unsigned &nplot, unsigned &offset_sum) const
 
virtual void scalar_value_fct_paraview (std::ofstream &file_out, const unsigned &i, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt) const
 
virtual void output (const unsigned &t, std::ostream &outfile, const unsigned &n_plot) const
 
virtual void output_fct (std::ostream &outfile, const unsigned &n_plot, const double &time, const SolutionFunctorBase &exact_soln) const
 Output a time-dependent exact solution over the element. More...
 
virtual void get_s_plot (const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
 
virtual std::string tecplot_zone_string (const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (std::ostream &outfile, const unsigned &nplot) const
 
virtual void write_tecplot_zone_footer (FILE *file_pt, const unsigned &nplot) const
 
virtual unsigned nplot_points (const unsigned &nplot) const
 
virtual void compute_error (FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_error (std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt exact_soln_pt, const double &time, Vector< double > &error, Vector< double > &norm)
 
virtual void compute_abs_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error)
 
void integrate_fct (FiniteElement::SteadyExactSolutionFctPt integrand_fct_pt, Vector< double > &integral)
 Integrate Vector-valued function over element. More...
 
void integrate_fct (FiniteElement::UnsteadyExactSolutionFctPt integrand_fct_pt, const double &time, Vector< double > &integral)
 Integrate Vector-valued time-dep function over element. More...
 
virtual void build_face_element (const int &face_index, FaceElement *face_element_pt)
 
virtual unsigned self_test ()
 
virtual unsigned get_bulk_node_number (const int &face_index, const unsigned &i) const
 
virtual int face_outer_unit_normal_sign (const int &face_index) const
 Get the sign of the outer unit normal on the face given by face_index. More...
 
virtual unsigned nnode_on_face () const
 
void face_node_number_error_check (const unsigned &i) const
 Range check for face node numbers. More...
 
virtual CoordinateMappingFctPt face_to_bulk_coordinate_fct_pt (const int &face_index) const
 
virtual BulkCoordinateDerivativesFctPt bulk_coordinate_derivatives_fct_pt (const int &face_index) const
 
- Public Member Functions inherited from oomph::GeneralisedElement
 GeneralisedElement ()
 Constructor: Initialise all pointers and all values to zero. More...
 
virtual ~GeneralisedElement ()
 Virtual destructor to clean up any memory allocated by the object. More...
 
 GeneralisedElement (const GeneralisedElement &)=delete
 Broken copy constructor. More...
 
void operator= (const GeneralisedElement &)=delete
 Broken assignment operator. More...
 
Data *& internal_data_pt (const unsigned &i)
 Return a pointer to i-th internal data object. More...
 
Data *const & internal_data_pt (const unsigned &i) const
 Return a pointer to i-th internal data object (const version) More...
 
Data *& external_data_pt (const unsigned &i)
 Return a pointer to i-th external data object. More...
 
Data *const & external_data_pt (const unsigned &i) const
 Return a pointer to i-th external data object (const version) More...
 
unsigned long eqn_number (const unsigned &ieqn_local) const
 
int local_eqn_number (const unsigned long &ieqn_global) const
 
unsigned add_external_data (Data *const &data_pt, const bool &fd=true)
 
bool external_data_fd (const unsigned &i) const
 
void exclude_external_data_fd (const unsigned &i)
 
void include_external_data_fd (const unsigned &i)
 
void flush_external_data ()
 Flush all external data. More...
 
void flush_external_data (Data *const &data_pt)
 Flush the object addressed by data_pt from the external data array. More...
 
unsigned ninternal_data () const
 Return the number of internal data objects. More...
 
unsigned nexternal_data () const
 Return the number of external data objects. More...
 
unsigned ndof () const
 Return the number of equations/dofs in the element. More...
 
void dof_vector (const unsigned &t, Vector< double > &dof)
 Return the vector of dof values at time level t. More...
 
void dof_pt_vector (Vector< double * > &dof_pt)
 Return the vector of pointers to dof values. More...
 
void set_internal_data_time_stepper (const unsigned &i, TimeStepper *const &time_stepper_pt, const bool &preserve_existing_data)
 
void assign_internal_eqn_numbers (unsigned long &global_number, Vector< double * > &Dof_pt)
 
void describe_dofs (std::ostream &out, const std::string &current_string) const
 
void add_internal_value_pt_to_map (std::map< unsigned, double * > &map_of_value_pt)
 
virtual void assign_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual void complete_setup_of_dependencies ()
 
virtual void get_residuals (Vector< double > &residuals)
 
virtual void get_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
virtual void get_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void get_jacobian_and_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
 
virtual void get_dresiduals_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam)
 
virtual void get_djacobian_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam)
 
virtual void get_djacobian_and_dmass_matrix_dparameter (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam)
 
virtual void get_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
virtual void get_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void get_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Public Member Functions inherited from oomph::GeomObject
 GeomObject ()
 Default constructor. More...
 
 GeomObject (const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim)
 
 GeomObject (const unsigned &nlagrangian, const unsigned &ndim, TimeStepper *time_stepper_pt)
 
 GeomObject (const GeomObject &dummy)=delete
 Broken copy constructor. More...
 
void operator= (const GeomObject &)=delete
 Broken assignment operator. More...
 
virtual ~GeomObject ()
 (Empty) destructor More...
 
unsigned nlagrangian () const
 Access function to # of Lagrangian coordinates. More...
 
unsigned ndim () const
 Access function to # of Eulerian coordinates. More...
 
void set_nlagrangian_and_ndim (const unsigned &n_lagrangian, const unsigned &n_dim)
 Set # of Lagrangian and Eulerian coordinates. More...
 
TimeStepper *& time_stepper_pt ()
 
TimeSteppertime_stepper_pt () const
 
virtual void position (const double &t, const Vector< double > &zeta, Vector< double > &r) const
 
virtual void dposition (const Vector< double > &zeta, DenseMatrix< double > &drdzeta) const
 
virtual void d2position (const Vector< double > &zeta, RankThreeTensor< double > &ddrdzeta) const
 
virtual void d2position (const Vector< double > &zeta, Vector< double > &r, DenseMatrix< double > &drdzeta, RankThreeTensor< double > &ddrdzeta) const
 
- Public Member Functions inherited from oomph::TemplateFreeNavierStokesEquationsBase
 TemplateFreeNavierStokesEquationsBase ()
 Constructor (empty) More...
 
virtual ~TemplateFreeNavierStokesEquationsBase ()
 Virtual destructor (empty) More...
 
- Public Member Functions inherited from oomph::NavierStokesElementWithDiagonalMassMatrices
 NavierStokesElementWithDiagonalMassMatrices ()
 Empty constructor. More...
 
virtual ~NavierStokesElementWithDiagonalMassMatrices ()
 Virtual destructor. More...
 
 NavierStokesElementWithDiagonalMassMatrices (const NavierStokesElementWithDiagonalMassMatrices &)=delete
 Broken copy constructor. More...
 
void operator= (const NavierStokesElementWithDiagonalMassMatrices &)=delete
 Broken assignment operator. More...
 
- Public Member Functions inherited from oomph::RefineableNavierStokesEquations< DIM >
 RefineableNavierStokesEquations ()
 Constructor. More...
 
virtual Nodepressure_node_pt (const unsigned &n_p)
 
void get_pressure_and_velocity_mass_matrix_diagonal (Vector< double > &press_mass_diag, Vector< double > &veloc_mass_diag, const unsigned &which_one=0)
 
unsigned num_Z2_flux_terms ()
 Number of 'flux' terms for Z2 error estimation. More...
 
void get_Z2_flux (const Vector< double > &s, Vector< double > &flux)
 
void dinterpolated_u_nst_ddata (const Vector< double > &s, const unsigned &i, Vector< double > &du_ddata, Vector< unsigned > &global_eqn_number)
 
- Public Member Functions inherited from oomph::RefineableElement
 RefineableElement ()
 
virtual ~RefineableElement ()
 Destructor, delete the allocated storage for the hanging equations. More...
 
 RefineableElement (const RefineableElement &)=delete
 Broken copy constructor. More...
 
void operator= (const RefineableElement &)=delete
 Broken assignment operator. More...
 
Treetree_pt ()
 Access function: Pointer to quadtree representation of this element. More...
 
void set_tree_pt (Tree *my_tree_pt)
 Set pointer to quadtree representation of this element. More...
 
virtual unsigned required_nsons () const
 
bool refinement_is_enabled ()
 Flag to indicate suppression of any refinement. More...
 
void disable_refinement ()
 Suppress of any refinement for this element. More...
 
void enable_refinement ()
 Emnable refinement for this element. More...
 
template<class ELEMENT >
void split (Vector< ELEMENT * > &son_pt) const
 
int local_hang_eqn (Node *const &node_pt, const unsigned &i)
 
virtual void build (Mesh *&mesh_pt, Vector< Node * > &new_node_pt, bool &was_already_built, std::ofstream &new_nodes_file)=0
 
void set_refinement_level (const int &refine_level)
 Set the refinement level. More...
 
unsigned refinement_level () const
 Return the Refinement level. More...
 
void select_for_refinement ()
 Select the element for refinement. More...
 
void deselect_for_refinement ()
 Deselect the element for refinement. More...
 
void select_sons_for_unrefinement ()
 Unrefinement will be performed by merging the four sons of this element. More...
 
void deselect_sons_for_unrefinement ()
 
bool to_be_refined ()
 Has the element been selected for refinement? More...
 
bool sons_to_be_unrefined ()
 Has the element been selected for unrefinement? More...
 
virtual void unbuild ()
 
virtual void deactivate_element ()
 
virtual bool nodes_built ()
 Return true if all the nodes have been built, false if not. More...
 
long number () const
 Element number (for debugging/plotting) More...
 
void set_number (const long &mynumber)
 Set element number (for debugging/plotting) More...
 
virtual Nodeinterpolating_node_pt (const unsigned &n, const int &value_id)
 
virtual double local_one_d_fraction_of_interpolating_node (const unsigned &n1d, const unsigned &i, const int &value_id)
 
virtual Nodeget_interpolating_node_at_local_coordinate (const Vector< double > &s, const int &value_id)
 
virtual unsigned ninterpolating_node (const int &value_id)
 
virtual unsigned ninterpolating_node_1d (const int &value_id)
 
virtual void interpolating_basis (const Vector< double > &s, Shape &psi, const int &value_id) const
 
virtual void check_integrity (double &max_error)=0
 
void identify_field_data_for_interactions (std::set< std::pair< Data *, unsigned >> &paired_field_data)
 
void assign_nodal_local_eqn_numbers (const bool &store_local_dof_pt)
 
virtual RefineableElementroot_element_pt ()
 
virtual RefineableElementfather_element_pt () const
 Return a pointer to the father element. More...
 
void get_father_at_refinement_level (unsigned &refinement_level, RefineableElement *&father_at_reflevel_pt)
 
virtual void initial_setup (Tree *const &adopted_father_pt=0, const unsigned &initial_p_order=0)
 
virtual void pre_build (Mesh *&mesh_pt, Vector< Node * > &new_node_pt)
 Pre-build the element. More...
 
virtual void setup_hanging_nodes (Vector< std::ofstream * > &output_stream)
 
unsigned nshape_controlling_nodes ()
 
std::map< Node *, unsignedshape_controlling_node_lookup ()
 
- Public Member Functions inherited from oomph::ElementWithZ2ErrorEstimator
 ElementWithZ2ErrorEstimator ()
 Default empty constructor. More...
 
 ElementWithZ2ErrorEstimator (const ElementWithZ2ErrorEstimator &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithZ2ErrorEstimator &)=delete
 Broken assignment operator. More...
 
virtual unsigned ncompound_fluxes ()
 
virtual void compute_exact_Z2_error (std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_flux_pt, double &error, double &norm)
 
virtual void get_Z2_compound_flux_indices (Vector< unsigned > &flux_index)
 
virtual double geometric_jacobian (const Vector< double > &x)
 
- Public Member Functions inherited from oomph::RefineableQElement< DIM >
 RefineableQElement ()
 Empty constuctor. More...
 
- Public Member Functions inherited from oomph::ElementWithExternalElement
 ElementWithExternalElement ()
 
virtual ~ElementWithExternalElement ()
 The destructor, clean up any allocated memory. More...
 
 ElementWithExternalElement (const ElementWithExternalElement &)=delete
 Broken copy constructor. More...
 
void operator= (const ElementWithExternalElement &)=delete
 Broken assignment operator. More...
 
bool storage_has_been_allocated () const
 Helper function to check if storage has actually been allocated. More...
 
FiniteElement *& external_element_pt (const unsigned &interaction_index, const unsigned &ipt)
 
FiniteElement *const & external_element_pt (const unsigned &interaction_index, const unsigned &ipt) const
 Access function to source element, const version. More...
 
Vector< double > & external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt)
 
Vector< double > const & external_element_local_coord (const unsigned &interaction_index, const unsigned &ipt) const
 Access function to get source element's coords, const version. More...
 
void output_external_elements (std::ostream &outfile, const unsigned &interaction_index)
 
void initialise_external_element_storage ()
 
void flush_all_external_element_storage ()
 Flush the storage for external elements. More...
 
void set_ninteraction (const unsigned &n_interaction)
 
unsigned ninteraction () const
 Return the number of interactions in the element. More...
 
virtual void identify_all_field_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< std::pair< Data *, unsigned >> &paired_interaction_data)
 
virtual void identify_all_geometric_data_for_external_interaction (Vector< std::set< FiniteElement * >> const &external_elements_pt, std::set< Data * > &external_geometric_data_pt)
 
unsigned nexternal_interaction_field_data () const
 
Vector< Data * > external_interaction_field_data_pt () const
 
unsigned nexternal_interaction_geometric_data () const
 
bool add_external_geometric_data ()
 Are we including external geometric data in the element's Jacobian. More...
 
bool add_external_interaction_data ()
 Are we including external data in the element's Jacobian. More...
 
Vector< Data * > external_interaction_geometric_data_pt () const
 
void ignore_external_geometric_data ()
 
void ignore_external_interaction_data ()
 
void include_external_geometric_data ()
 
void include_external_interaction_data ()
 
bool external_geometric_data_is_included () const
 
void describe_local_dofs (std::ostream &out, const std::string &curr_string) const
 

Private Member Functions

double Default_Physical_Constant_Value
 Set the default physical value to be zero in 2D and 3D. More...
 
double Default_Physical_Constant_Value
 

Private Attributes

doubleRa_pt
 Pointer to a private data member, the Rayleigh number. More...
 

Static Private Attributes

static double Default_Physical_Constant_Value
 The static default value of the Rayleigh number. More...
 

Additional Inherited Members

- Public Types inherited from oomph::NavierStokesEquations< DIM >
typedef void(* NavierStokesBodyForceFctPt) (const double &time, const Vector< double > &x, Vector< double > &body_force)
 
typedef double(* NavierStokesSourceFctPt) (const double &time, const Vector< double > &x)
 
typedef double(* NavierStokesPressureAdvDiffSourceFctPt) (const Vector< double > &x)
 
- Public Types inherited from oomph::FiniteElement
typedef void(* SteadyExactSolutionFctPt) (const Vector< double > &, Vector< double > &)
 
typedef void(* UnsteadyExactSolutionFctPt) (const double &, const Vector< double > &, Vector< double > &)
 
- Static Public Member Functions inherited from oomph::RefineableNavierStokesEquations< DIM >
static void pin_redundant_nodal_pressures (const Vector< GeneralisedElement * > &element_pt)
 
static void unpin_all_pressure_dofs (const Vector< GeneralisedElement * > &element_pt)
 Unpin all pressure dofs in elements listed in vector. More...
 
- Static Public Member Functions inherited from oomph::RefineableElement
static doublemax_integrity_tolerance ()
 Max. allowed discrepancy in element integrity check. More...
 
- Static Public Attributes inherited from oomph::NavierStokesEquations< DIM >
static Vector< doubleGamma
 Vector to decide whether the stress-divergence form is used or not. More...
 
- Static Public Attributes inherited from oomph::FiniteElement
static double Tolerance_for_singular_jacobian = 1.0e-16
 Tolerance below which the jacobian is considered singular. More...
 
static bool Accept_negative_jacobian = false
 
static bool Suppress_output_while_checking_for_inverted_elements
 
- Static Public Attributes inherited from oomph::GeneralisedElement
static bool Suppress_warning_about_repeated_internal_data
 
static bool Suppress_warning_about_repeated_external_data = true
 
static double Default_fd_jacobian_step = 1.0e-8
 
- Protected Member Functions inherited from oomph::QCrouzeixRaviartElement< DIM >
double dshape_and_dtest_eulerian_nst (const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
double dshape_and_dtest_eulerian_at_knot_nst (const unsigned &ipt, Shape &psi, DShape &dpsidx, RankFourTensor< double > &d_dpsidx_dX, Shape &test, DShape &dtestdx, RankFourTensor< double > &d_dtestdx_dX, DenseMatrix< double > &djacobian_dX) const
 
- Protected Member Functions inherited from oomph::NavierStokesEquations< DIM >
virtual void get_body_force_gradient_nst (const double &time, const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, DenseMatrix< double > &d_body_force_dx)
 
virtual double get_source_nst (const double &time, const unsigned &ipt, const Vector< double > &x)
 
virtual void get_source_gradient_nst (const double &time, const unsigned &ipt, const Vector< double > &x, Vector< double > &gradient)
 
virtual void fill_in_generic_dresidual_contribution_nst (double *const &parameter_pt, Vector< double > &dres_dparam, DenseMatrix< double > &djac_dparam, DenseMatrix< double > &dmass_matrix_dparam, unsigned flag)
 
void fill_in_contribution_to_hessian_vector_products (Vector< double > const &Y, DenseMatrix< double > const &C, DenseMatrix< double > &product)
 
- Protected Member Functions inherited from oomph::FiniteElement
template<unsigned DIM>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double invert_jacobian_mapping (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
virtual double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
double local_to_eulerian_mapping (const DShape &dpsids, DenseMatrix< double > &inverse_jacobian) const
 
virtual void dJ_eulerian_dnodal_coordinates (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<unsigned DIM>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
virtual void d_dshape_eulerian_dnodal_coordinates (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<unsigned DIM>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
virtual void transform_derivatives (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
void transform_derivatives_diagonal (const DenseMatrix< double > &inverse_jacobian, DShape &dbasis) const
 
virtual void transform_second_derivatives (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<unsigned DIM>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
void fill_in_jacobian_from_nodal_by_fd (DenseMatrix< double > &jacobian)
 
virtual void update_before_nodal_fd ()
 
virtual void reset_after_nodal_fd ()
 
virtual void update_in_nodal_fd (const unsigned &i)
 
virtual void reset_in_nodal_fd (const unsigned &i)
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Zero-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 One-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 Two-d specialisation of function to calculate inverse of jacobian mapping. More...
 
template<>
double invert_jacobian (const DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void dJ_eulerian_dnodal_coordinates_templated_helper (const DenseMatrix< double > &jacobian, const DShape &dpsids, DenseMatrix< double > &djacobian_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void d_dshape_eulerian_dnodal_coordinates_templated_helper (const double &det_jacobian, const DenseMatrix< double > &jacobian, const DenseMatrix< double > &djacobian_dX, const DenseMatrix< double > &inverse_jacobian, const DShape &dpsids, RankFourTensor< double > &d_dpsidx_dX) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_template (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
template<>
void transform_second_derivatives_diagonal (const DenseMatrix< double > &jacobian, const DenseMatrix< double > &inverse_jacobian, const DenseMatrix< double > &jacobian2, DShape &dbasis, DShape &d2basis) const
 
- Protected Member Functions inherited from oomph::GeneralisedElement
unsigned add_internal_data (Data *const &data_pt, const bool &fd=true)
 
bool internal_data_fd (const unsigned &i) const
 
void exclude_internal_data_fd (const unsigned &i)
 
void include_internal_data_fd (const unsigned &i)
 
void clear_global_eqn_numbers ()
 
void add_global_eqn_numbers (std::deque< unsigned long > const &global_eqn_numbers, std::deque< double * > const &global_dof_pt)
 
virtual void assign_additional_local_eqn_numbers ()
 
int internal_local_eqn (const unsigned &i, const unsigned &j) const
 
int external_local_eqn (const unsigned &i, const unsigned &j)
 
void fill_in_jacobian_from_internal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_internal_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
void fill_in_jacobian_from_external_by_fd (DenseMatrix< double > &jacobian, const bool &fd_all_data=false)
 
virtual void update_before_internal_fd ()
 
virtual void reset_after_internal_fd ()
 
virtual void update_in_internal_fd (const unsigned &i)
 
virtual void reset_in_internal_fd (const unsigned &i)
 
virtual void update_before_external_fd ()
 
virtual void reset_after_external_fd ()
 
virtual void update_in_external_fd (const unsigned &i)
 
virtual void reset_in_external_fd (const unsigned &i)
 
virtual void fill_in_contribution_to_mass_matrix (Vector< double > &residuals, DenseMatrix< double > &mass_matrix)
 
virtual void fill_in_contribution_to_inner_products (Vector< std::pair< unsigned, unsigned >> const &history_index, Vector< double > &inner_product)
 
virtual void fill_in_contribution_to_inner_product_vectors (Vector< unsigned > const &history_index, Vector< Vector< double >> &inner_product_vector)
 
- Protected Member Functions inherited from oomph::RefineableNavierStokesEquations< DIM >
virtual void pin_elemental_redundant_nodal_pressure_dofs ()
 
void fill_in_generic_residual_contribution_nst (Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
 
void fill_in_generic_pressure_advection_diffusion_contribution_nst (Vector< double > &residuals, DenseMatrix< double > &jacobian, unsigned flag)
 
virtual void get_dresidual_dnodal_coordinates (RankThreeTensor< double > &dresidual_dnodal_coordinates)
 
- Protected Member Functions inherited from oomph::RefineableElement
void assemble_local_to_eulerian_jacobian (const DShape &dpsids, DenseMatrix< double > &jacobian) const
 
void assemble_local_to_eulerian_jacobian2 (const DShape &d2psids, DenseMatrix< double > &jacobian2) const
 
void assemble_eulerian_base_vectors (const DShape &dpsids, DenseMatrix< double > &interpolated_G) const
 
double local_to_eulerian_mapping_diagonal (const DShape &dpsids, DenseMatrix< double > &jacobian, DenseMatrix< double > &inverse_jacobian) const
 
void assign_hanging_local_eqn_numbers (const bool &store_local_dof_pt)
 Assign the local equation numbers for hanging node variables. More...
 
virtual void fill_in_jacobian_from_nodal_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
- Protected Member Functions inherited from oomph::ElementWithExternalElement
void assign_internal_and_external_local_eqn_numbers (const bool &store_local_dof_pt)
 
void assign_external_interaction_data_local_eqn_numbers (const bool &store_local_dof_pt)
 
void fill_in_jacobian_from_external_interaction_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_by_fd (DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_field_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_field_by_fd (DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_geometric_by_fd (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
void fill_in_jacobian_from_external_interaction_geometric_by_fd (DenseMatrix< double > &jacobian)
 
void fill_in_contribution_to_jacobian (Vector< double > &residuals, DenseMatrix< double > &jacobian)
 
virtual void update_before_external_interaction_field_fd ()
 
virtual void reset_after_external_interaction_field_fd ()
 
virtual void update_in_external_interaction_field_fd (const unsigned &i)
 
virtual void reset_in_external_interaction_field_fd (const unsigned &i)
 
virtual void update_before_external_interaction_geometric_fd ()
 
virtual void reset_after_external_interaction_geometric_fd ()
 
virtual void update_in_external_interaction_geometric_fd (const unsigned &i)
 
virtual void reset_in_external_interaction_geometric_fd (const unsigned &i)
 
- Static Protected Member Functions inherited from oomph::RefineableElement
static void check_value_id (const int &n_continuously_interpolated_values, const int &value_id)
 
- Protected Attributes inherited from oomph::QCrouzeixRaviartElement< DIM >
unsigned P_nst_internal_index
 
- Protected Attributes inherited from oomph::NavierStokesEquations< DIM >
doubleViscosity_Ratio_pt
 
doubleDensity_Ratio_pt
 
doubleRe_pt
 Pointer to global Reynolds number. More...
 
doubleReSt_pt
 Pointer to global Reynolds number x Strouhal number (=Womersley) More...
 
doubleReInvFr_pt
 
Vector< double > * G_pt
 Pointer to global gravity Vector. More...
 
NavierStokesBodyForceFctPt Body_force_fct_pt
 Pointer to body force function. More...
 
NavierStokesSourceFctPt Source_fct_pt
 Pointer to volumetric source function. More...
 
NavierStokesPressureAdvDiffSourceFctPt Press_adv_diff_source_fct_pt
 
bool ALE_is_disabled
 
Vector< FpPressureAdvDiffRobinBCElementBase * > Pressure_advection_diffusion_robin_element_pt
 
int Pinned_fp_pressure_eqn
 
- Protected Attributes inherited from oomph::FiniteElement
MacroElementMacro_elem_pt
 Pointer to the element's macro element (NULL by default) More...
 
- Protected Attributes inherited from oomph::GeomObject
unsigned NLagrangian
 Number of Lagrangian (intrinsic) coordinates. More...
 
unsigned Ndim
 Number of Eulerian coordinates. More...
 
TimeStepperGeom_object_time_stepper_pt
 
- Protected Attributes inherited from oomph::RefineableElement
TreeTree_pt
 A pointer to a general tree object. More...
 
unsigned Refine_level
 Refinement level. More...
 
bool To_be_refined
 Flag for refinement. More...
 
bool Refinement_is_enabled
 Flag to indicate suppression of any refinement. More...
 
bool Sons_to_be_unrefined
 Flag for unrefinement. More...
 
long Number
 Global element number – for plotting/validation purposes. More...
 
- Protected Attributes inherited from oomph::ElementWithExternalElement
bool Add_external_interaction_data
 Boolean flag to indicate whether to include the external data. More...
 
bool Add_external_geometric_data
 Boolean flag to indicate whether to include the external geometric data. More...
 
Data ** External_interaction_field_data_pt
 
Data ** External_interaction_geometric_data_pt
 
- Static Protected Attributes inherited from oomph::FiniteElement
static const unsigned Default_Initial_Nvalue = 0
 Default value for the number of values at a node. More...
 
static const double Node_location_tolerance = 1.0e-14
 
static const unsigned N2deriv [] = {0, 1, 3, 6}
 
- Static Protected Attributes inherited from oomph::GeneralisedElement
static DenseMatrix< doubleDummy_matrix
 
static std::deque< double * > Dof_pt_deque
 
- Static Protected Attributes inherited from oomph::RefineableElement
static double Max_integrity_tolerance = 1.0e-8
 Max. allowed discrepancy in element integrity check. More...
 

Detailed Description

template<unsigned DIM>
class RefineableQCrouzeixRaviartElementWithExternalElement< DIM >

Build RefineableQCrouzeixRaviartElementWithExternalElement that inherits from ElementWithExternalElement so that it can "communicate" with RefineableQAdvectionDiffusionElementWithExternalElement

Constructor & Destructor Documentation

◆ RefineableQCrouzeixRaviartElementWithExternalElement()

Constructor: call the underlying constructors and initialise the pointer to the Rayleigh number to point to the default value of 0.0.

64  :
67  {
69 
70  //There is one interaction
71  this->set_ninteraction(1);
72 
73  //We do not need to add any external geometric data because the
74  //element is fixed
76  }
static double Default_Physical_Constant_Value
The static default value of the Rayleigh number.
Definition: my_boussinesq_elements.h:57
double * Ra_pt
Pointer to a private data member, the Rayleigh number.
Definition: my_boussinesq_elements.h:54
void set_ninteraction(const unsigned &n_interaction)
Definition: element_with_external_element.h:178
void ignore_external_geometric_data()
Definition: element_with_external_element.h:271
ElementWithExternalElement()
Definition: element_with_external_element.h:60
Refineable version of Crouzeix Raviart elements. Generic class definitions.
Definition: refineable_navier_stokes_elements.h:1109

References oomph::MultiDomainBoussinesqHelper::Default_Physical_Constant_Value.

Member Function Documentation

◆ compute_error() [1/2]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::compute_error ( ostream &  outfile,
FiniteElement::SteadyExactSolutionFctPt  exact_soln_pt,
double error,
double norm 
)
inline

Validate against exact solution. Solution is provided via function pointer. Plot at a given number of plot points and compute L2 error and L2 norm of velocity solution over element Call the broken default

198  {FiniteElement::compute_error(outfile,exact_soln_pt,error,norm);}
int error
Definition: calibrate.py:297
void compute_error(std::ostream &outfile, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt, double &error, double &norm)
Get error against and norm of exact solution.

References oomph::FiniteElement::compute_error(), and calibrate::error.

◆ compute_error() [2/2]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::compute_error ( ostream &  outfile,
FiniteElement::UnsteadyExactSolutionFctPt  exact_soln_pt,
const double time,
double error,
double norm 
)
inline

Does something need to be done about the Z2 flux? In order to test against the single-mesh problem this just needs to come from this mesh, so don't overload this one - overload the other one to have the same values as this one, somehow... Validate against exact solution at given time Solution is provided via function pointer. Plot at a given number of plot points and compute L2 error and L2 norm of velocity solution over element Call the broken default

187  {FiniteElement::compute_error(outfile,exact_soln_pt,
188  time,error,norm);}

References oomph::FiniteElement::compute_error(), and calibrate::error.

◆ Default_Physical_Constant_Value() [1/2]

double RefineableQCrouzeixRaviartElementWithExternalElement< 2 >::Default_Physical_Constant_Value
private

Set the default physical value to be zero in 2D and 3D.

◆ Default_Physical_Constant_Value() [2/2]

double RefineableQCrouzeixRaviartElementWithExternalElement< 3 >::Default_Physical_Constant_Value
private

◆ fill_in_contribution_to_jacobian()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::fill_in_contribution_to_jacobian ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inlinevirtual

Compute the element's residual vector and the Jacobian matrix. Jacobian is computed by finite-differencing.

Reimplemented from oomph::GeneralisedElement.

225  {
226 #ifdef USE_FD_JACOBIAN_FOR_MY_NAVIER_STOKES_ELEMENT
227  // This function computes the Jacobian by finite-differencing
229 #else
230  //Get the contribution from the basic Navier--Stokes element
232  fill_in_contribution_to_jacobian(residuals,jacobian);
233  //Get the off-diagonal terms analytically
234  this->fill_in_off_diagonal_block_analytic(residuals,jacobian);
235 #endif
236 
237  }
void fill_in_off_diagonal_block_analytic(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: my_boussinesq_elements.h:254
void fill_in_contribution_to_jacobian(Vector< double > &residuals, DenseMatrix< double > &jacobian)
Definition: gen_axisym_advection_diffusion_elements.h:536

References oomph::FiniteElement::fill_in_contribution_to_jacobian(), and oomph::NavierStokesEquations< DIM >::fill_in_contribution_to_jacobian().

◆ fill_in_contribution_to_jacobian_and_mass_matrix()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::fill_in_contribution_to_jacobian_and_mass_matrix ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian,
DenseMatrix< double > &  mass_matrix 
)
inlinevirtual

Add the element's contribution to its residuals vector, jacobian matrix and mass matrix

Reimplemented from oomph::GeneralisedElement.

244  {
245  //Call the standard (Broken) function
246  //which will prevent these elements from being used
247  //in eigenproblems until replaced.
249  residuals,jacobian,mass_matrix);
250  }
void fill_in_contribution_to_jacobian_and_mass_matrix(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix)
Definition: gen_axisym_advection_diffusion_elements.h:547

References oomph::GeneralisedElement::fill_in_contribution_to_jacobian_and_mass_matrix().

◆ fill_in_contribution_to_residuals()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::fill_in_contribution_to_residuals ( Vector< double > &  residuals)
inlinevirtual

Fill in the constituent elements' contribution to the residual vector.

Reimplemented from oomph::GeneralisedElement.

215  {
216  //Call the residuals of the Navier-Stokes equations
218  residuals);
219  }
void fill_in_contribution_to_residuals(Vector< double > &residuals)
Add the element's contribution to its residual vector (wrapper)
Definition: gen_axisym_advection_diffusion_elements.h:522

References oomph::NavierStokesEquations< DIM >::fill_in_contribution_to_residuals().

◆ fill_in_off_diagonal_block_analytic()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::fill_in_off_diagonal_block_analytic ( Vector< double > &  residuals,
DenseMatrix< double > &  jacobian 
)
inline

Compute the contribution of the external degrees of freedom (temperatures) on the Navier-Stokes equations

256  {
257  //Local storage for the index in the nodes at which the
258  //Navier-Stokes velocities are stored (we know that this should be 0,1,2)
259  unsigned u_nodal_nst[DIM];
260  for(unsigned i=0;i<DIM;i++)
261  {u_nodal_nst[i] = this->u_index_nst(i);}
262 
263  //Find out how many nodes there are
264  const unsigned n_node = this->nnode();
265 
266  //Set up memory for the shape and test functions and their derivatives
267  Shape psif(n_node), testf(n_node);
268  DShape dpsifdx(n_node,DIM), dtestfdx(n_node,DIM);
269 
270  //Number of integration points
271  const unsigned n_intpt = this->integral_pt()->nweight();
272 
273  //Integers to store the local equations and unknowns
274  int local_eqn=0, local_unknown=0;
275 
276  // Local storage for pointers to hang_info objects
277  HangInfo *hang_info_pt=0;
278 
279  //Loop over the integration points
280  for(unsigned ipt=0;ipt<n_intpt;ipt++)
281  {
282  //Get the integral weight
283  double w = this->integral_pt()->weight(ipt);
284 
285  //Call the derivatives of the shape and test functions
286  double J =
287  this->dshape_and_dtest_eulerian_at_knot_nst(ipt,psif,dpsifdx,
288  testf,dtestfdx);
289 
290  //Premultiply the weights and the Jacobian
291  double W = w*J;
292 
293  //Assemble the jacobian terms
294 
295  //Get the derivatives of the body force wrt the unknowns
296  //of the external element
297  DenseMatrix<double> dbody_dexternal_element_data;
298  //Vector of global equation number corresponding to the external
299  //element's data
300  Vector<unsigned> global_eqn_number_of_external_element_data;
301  //Get the appropriate derivatives
303  ipt,dbody_dexternal_element_data,
304  global_eqn_number_of_external_element_data);
305  //Find out how many external data there are
306  const unsigned n_external_element_data =
307  global_eqn_number_of_external_element_data.size();
308 
309  //Loop over the test functions
310  for(unsigned l=0;l<n_node;l++)
311  {
312  //Assemble the contributions of the temperature to
313  //the Navier--Stokes equations (which arise through the buoyancy
314  //body-force term)
315  unsigned n_master = 1;
316  double hang_weight = 1.0;
317 
318  //Local bool (is the node hanging)
319  bool is_node_hanging = this->node_pt(l)->is_hanging();
320 
321  //If the node is hanging, get the number of master nodes
322  if(is_node_hanging)
323  {
324  hang_info_pt = this->node_pt(l)->hanging_pt();
325  n_master = hang_info_pt->nmaster();
326  }
327  //Otherwise there is just one master node, the node itself
328  else
329  {
330  n_master = 1;
331  }
332 
333  //Loop over the master nodes
334  for(unsigned m=0;m<n_master;m++)
335  {
336  //If the node is hanging get weight from master node
337  if(is_node_hanging)
338  {
339  //Get the hang weight from the master node
340  hang_weight = hang_info_pt->master_weight(m);
341  }
342  else
343  {
344  // Node contributes with full weight
345  hang_weight = 1.0;
346  }
347 
348 
349  //Loop over the velocity components in the Navier--Stokes equtions
350  for(unsigned i=0;i<DIM;i++)
351  {
352  //Get the equation number
353  if(is_node_hanging)
354  {
355  //Get the equation number from the master node
356  local_eqn = this->local_hang_eqn(hang_info_pt->master_node_pt(m),
357  u_nodal_nst[i]);
358  }
359  else
360  {
361  // Local equation number
362  local_eqn = this->nodal_local_eqn(l,u_nodal_nst[i]);
363  }
364 
365  if(local_eqn >= 0)
366  {
367  //Loop over the external data
368  for(unsigned l2=0;l2<n_external_element_data;l2++)
369  {
370  //Find the local equation number corresponding to the global
371  //unknown
372  local_unknown =
373  this->local_eqn_number(
374  global_eqn_number_of_external_element_data[l2]);
375  if(local_unknown >= 0)
376  {
377  //Add contribution to jacobian matrix
378  jacobian(local_eqn,local_unknown)
379  += dbody_dexternal_element_data(i,l2)*testf(l)*hang_weight*W;
380  }
381  }
382  }
383  }
384  }
385  }
386  }
387  }
int i
Definition: BiCGSTAB_step_by_step.cpp:9
JacobiRotation< float > J
Definition: Jacobi_makeJacobi.cpp:3
RowVector3d w
Definition: Matrix_resize_int.cpp:3
void get_dbody_force_nst_dexternal_element_data(const unsigned &ipt, DenseMatrix< double > &result, Vector< unsigned > &global_eqn_number)
external unknowns
Definition: my_boussinesq_elements.h:833
Definition: shape.h:278
Node *& node_pt(const unsigned &n)
Return a pointer to the local node n.
Definition: elements.h:2175
int nodal_local_eqn(const unsigned &n, const unsigned &i) const
Definition: elements.h:1432
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2210
Integral *const & integral_pt() const
Return the pointer to the integration scheme (const version)
Definition: elements.h:1963
int local_eqn_number(const unsigned long &ieqn_global) const
Definition: elements.h:726
Definition: nodes.h:742
double const & master_weight(const unsigned &i) const
Return weight for dofs on i-th master node.
Definition: nodes.h:808
Node *const & master_node_pt(const unsigned &i) const
Return a pointer to the i-th master node.
Definition: nodes.h:791
unsigned nmaster() const
Return the number of master nodes.
Definition: nodes.h:785
virtual unsigned nweight() const =0
Return the number of integration points of the scheme.
virtual double weight(const unsigned &i) const =0
Return weight of i-th integration point.
virtual unsigned u_index_nst(const unsigned &i) const
Definition: navier_stokes_elements.h:866
HangInfo *const & hanging_pt() const
Definition: nodes.h:1228
bool is_hanging() const
Test whether the node is geometrically hanging.
Definition: nodes.h:1285
double dshape_and_dtest_eulerian_at_knot_nst(const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
Definition: navier_stokes_elements.h:1981
int local_hang_eqn(Node *const &node_pt, const unsigned &i)
Definition: refineable_elements.h:278
Definition: shape.h:76
int * m
Definition: level2_cplx_impl.h:294
#define DIM
Definition: linearised_navier_stokes_elements.h:44
@ W
Definition: quadtree.h:63

References DIM, i, J, m, oomph::HangInfo::master_node_pt(), oomph::HangInfo::master_weight(), oomph::HangInfo::nmaster(), w, and oomph::QuadTreeNames::W.

◆ further_build()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::further_build ( )
inlinevirtual

Call the underlying single-physics element's further_build() functions and make sure that the pointer to the Rayleigh number is passed to the sons

Reimplemented from oomph::RefineableElement.

158  {
160 
161  //Cast the pointer to the father element to the specific
162  //element type
164  cast_father_element_pt
166  this->father_element_pt());
167 
168  //Set the pointer to the Rayleigh number to be the same as that in
169  //the father
170  this->Ra_pt = cast_father_element_pt->ra_pt();
171  }
Definition: my_boussinesq_elements.h:49
double *& ra_pt()
Access function for the pointer to the Rayleigh number.
Definition: my_boussinesq_elements.h:87
virtual RefineableElement * father_element_pt() const
Return a pointer to the father element.
Definition: refineable_elements.h:539

References oomph::RefineableQCrouzeixRaviartElement< DIM >::further_build(), and RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::ra_pt().

◆ get_body_force_nst()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::get_body_force_nst ( const double time,
const unsigned ipt,
const Vector< double > &  s,
const Vector< double > &  x,
Vector< double > &  result 
)
virtual

Calculate the body force at a given time and local and/or Eulerian position. This function is virtual so that it can be overloaded in multi-physics elements where the body force might depend on another variable.

Reimplemented from oomph::NavierStokesEquations< DIM >.

806 {
807  // The interaction is stored at index 0 of the AD element
808  unsigned interaction=0;
809 
810  // Dynamic cast the source element at this integration point to correct type
813  (external_element_pt(interaction,ipt));
814 
815  // Get vector that indicates the direction of gravity from
816  // the Navier-Stokes equations
818 
819  // Temperature-dependent body force:
820  for (unsigned i=0;i<DIM;i++)
821  {
822  result[i] = -gravity[i]*source_el_pt->interpolated_u_adv_diff
823  (external_element_local_coord(interaction,ipt))*ra();
824  }
825 }
const double & ra() const
Access function for the Rayleigh number (const version)
Definition: my_boussinesq_elements.h:84
double interpolated_u_adv_diff(const Vector< double > &s) const
Return FE representation of function value u(s) at local coordinate s.
Definition: advection_diffusion_elements.h:458
Vector< double > & external_element_local_coord(const unsigned &interaction_index, const unsigned &ipt)
Definition: element_with_external_element.h:136
FiniteElement *& external_element_pt(const unsigned &interaction_index, const unsigned &ipt)
Definition: element_with_external_element.h:107
Definition: navier_stokes_elements.h:395
Definition: refineable_advection_diffusion_elements.h:58
void gravity(const double &t, const Vector< double > &xi, Vector< double > &b)
Definition: ConstraintElementsUnitTest.cpp:20
Definition: MortaringCantileverCompareToNonMortaring.cpp:176

References DIM, Gravity::gravity(), i, and oomph::AdvectionDiffusionEquations< DIM >::interpolated_u_adv_diff().

◆ get_dbody_force_nst_dexternal_element_data()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::get_dbody_force_nst_dexternal_element_data ( const unsigned ipt,
DenseMatrix< double > &  result,
Vector< unsigned > &  global_eqn_number 
)

external unknowns

Fill in the derivatives of the body force with respect to the

Fill in the derivatives of the body force with respect to the external unknowns in the Navier–Stokes equations

836 {
837  // The interaction index is 0 in this case
838  unsigned interaction=0;
839 
840  // Dynamic cast "other" element to correct type
843  (external_element_pt(interaction,ipt));
844 
845  // Get vector that indicates the direction of gravity from
846  // the Navier-Stokes equations
848 
849  // Get the external element's derivatives
850  Vector<double> du_adv_diff_ddata;
851  source_el_pt->dinterpolated_u_adv_diff_ddata(
852  external_element_local_coord(interaction,ipt),du_adv_diff_ddata,
853  global_eqn_number);
854 
855  //Find the number of external data
856  unsigned n_external_element_data = du_adv_diff_ddata.size();
857  //Set the size of the matrix to be returned
858  result.resize(DIM,n_external_element_data);
859 
860  // Temperature-dependent body force:
861  for (unsigned i=0;i<DIM;i++)
862  {
863  //Loop over the external data
864  for(unsigned n=0;n<n_external_element_data;n++)
865  {
866  result(i,n) = -gravity[i]*du_adv_diff_ddata[n]*ra();
867  }
868  }
869 }
const unsigned n
Definition: CG3DPackingUnitTest.cpp:11
void resize(const unsigned long &n)
Definition: matrices.h:498
void dinterpolated_u_adv_diff_ddata(const Vector< double > &s, Vector< double > &du_ddata, Vector< unsigned > &global_eqn_number)
Definition: refineable_advection_diffusion_elements.h:199

References DIM, oomph::RefineableAdvectionDiffusionEquations< DIM >::dinterpolated_u_adv_diff_ddata(), Gravity::gravity(), i, n, and oomph::DenseMatrix< T >::resize().

◆ get_dof_numbers_for_unknowns()

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::get_dof_numbers_for_unknowns ( std::list< std::pair< unsigned long, unsigned > > &  dof_lookup_list) const
inline
392  {
393  // Call the underlying CrouzeixRaviart function
395  (dof_lookup_list);
396  }
Definition: navier_stokes_elements.h:1749

References oomph::QCrouzeixRaviartElement< DIM >::get_dof_numbers_for_unknowns().

◆ ndof_types()

template<unsigned DIM>
unsigned RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::ndof_types ( ) const
inlinevirtual

The number of types of degrees of freedom in this element are sub-divided into

Reimplemented from oomph::GeneralisedElement.

399  {
401  }

References oomph::QCrouzeixRaviartElement< DIM >::ndof_types().

◆ output() [1/4]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::output ( FILE *  file_pt)
inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

130  {FiniteElement::output(file_pt);}
void output(std::ostream &outfile, const unsigned &nplot)
Overload output function.
Definition: overloaded_element_body.h:490

References oomph::FiniteElement::output().

◆ output() [2/4]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::output ( FILE *  file_pt,
const unsigned n_plot 
)
inlinevirtual

C-style output function: Broken default.

Reimplemented from oomph::FiniteElement.

134  {FiniteElement::output(file_pt,n_plot);}

References oomph::FiniteElement::output().

◆ output() [3/4]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::output ( ostream &  outfile)
inlinevirtual

Overload the standard output function with the broken default.

Reimplemented from oomph::FiniteElement.

90 {FiniteElement::output(outfile);}

References oomph::FiniteElement::output().

◆ output() [4/4]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::output ( ostream &  outfile,
const unsigned nplot 
)
inlinevirtual

Output function:
Output x, y, u, v, p at Nplot^DIM plot points

Reimplemented from oomph::FiniteElement.

96  {
97  //vector of local coordinates
99 
100  // Tecplot header info
101  outfile << this->tecplot_zone_string(nplot);
102 
103  // Loop over plot points
104  unsigned num_plot_points=this->nplot_points(nplot);
105  for (unsigned iplot=0;iplot<num_plot_points;iplot++)
106  {
107  // Get local coordinates of plot point
108  this->get_s_plot(iplot,nplot,s);
109 
110  // Output the position of the plot point
111  for(unsigned i=0;i<DIM;i++)
112  {outfile << this->interpolated_x(s,i) << " ";}
113 
114  // Output the fluid velocities at the plot point
115  for(unsigned i=0;i<DIM;i++)
116  {outfile << this->interpolated_u_nst(s,i) << " ";}
117 
118  // Output the fluid pressure at the plot point
119  outfile << this->interpolated_p_nst(s) << " " << std::endl;;
120  }
121  outfile << std::endl;
122 
123  // Write tecplot footer (e.g. FE connectivity lists)
124  this->write_tecplot_zone_footer(outfile,nplot);
125  } //End of output function
virtual std::string tecplot_zone_string(const unsigned &nplot) const
Definition: elements.h:3161
virtual double interpolated_x(const Vector< double > &s, const unsigned &i) const
Return FE interpolated coordinate x[i] at local coordinate s.
Definition: elements.cc:3962
virtual void get_s_plot(const unsigned &i, const unsigned &nplot, Vector< double > &s, const bool &shifted_to_interior=false) const
Definition: elements.h:3148
virtual unsigned nplot_points(const unsigned &nplot) const
Definition: elements.h:3186
virtual void write_tecplot_zone_footer(std::ostream &outfile, const unsigned &nplot) const
Definition: elements.h:3174
void interpolated_u_nst(const Vector< double > &s, Vector< double > &veloc) const
Compute vector of FE interpolated velocity u at local coordinate s.
Definition: navier_stokes_elements.h:1505
virtual double interpolated_p_nst(const Vector< double > &s) const
Return FE interpolated pressure at local coordinate s.
Definition: navier_stokes_elements.h:1639
RealScalar s
Definition: level1_cplx_impl.h:130

References DIM, i, and s.

◆ output_fct() [1/2]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::output_fct ( ostream &  outfile,
const unsigned Nplot,
const double time,
FiniteElement::UnsteadyExactSolutionFctPt  exact_soln_pt 
)
inline

Output function for a time-dependent exact solution: Broken default.

149  {
151  output_fct(outfile,Nplot,time,exact_soln_pt);
152  }
void output_fct(std::ostream &outfile, const unsigned &nplot, FiniteElement::SteadyExactSolutionFctPt exact_soln_pt)
Output exact soln: r,z,u_exact at nplot^2 plot points.

References oomph::FiniteElement::output_fct().

◆ output_fct() [2/2]

template<unsigned DIM>
void RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::output_fct ( ostream &  outfile,
const unsigned Nplot,
FiniteElement::SteadyExactSolutionFctPt  exact_soln_pt 
)
inline

Output function for an exact solution: Broken default.

140  {FiniteElement::output_fct(outfile,Nplot,exact_soln_pt);}

References oomph::FiniteElement::output_fct().

◆ ra()

template<unsigned DIM>
const double& RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::ra ( ) const
inline

Access function for the Rayleigh number (const version)

84 {return *Ra_pt;}

◆ ra_pt()

template<unsigned DIM>
double* & RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::ra_pt ( )
inline

Access function for the pointer to the Rayleigh number.

87 {return Ra_pt;}

Referenced by RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::further_build().

◆ required_nvalue()

template<unsigned DIM>
unsigned RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::required_nvalue ( const unsigned n) const
inlinevirtual

The required number of values stored at the nodes is the number of required values of the CrouzeixRaviartElement.

Reimplemented from oomph::FiniteElement.

References n, and oomph::QCrouzeixRaviartElement< DIM >::required_nvalue().

Member Data Documentation

◆ Default_Physical_Constant_Value

template<unsigned DIM>
double RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::Default_Physical_Constant_Value
staticprivate

The static default value of the Rayleigh number.

◆ Ra_pt

template<unsigned DIM>
double* RefineableQCrouzeixRaviartElementWithExternalElement< DIM >::Ra_pt
private

Pointer to a private data member, the Rayleigh number.


The documentation for this class was generated from the following file: